HEADER ELECTRON TRANSPORT 16-DEC-13 4O1W TITLE CRYSTAL STRUCTURE OF COLWELLIA PSYCHRERYTHRAEA CYTOCHROME C COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C552; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: UNP RESIDUES 22-100; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COLWELLIA PSYCHRERYTHRAEA; SOURCE 3 ORGANISM_TAXID: 167879; SOURCE 4 STRAIN: 34H / ATCC BAA-681; SOURCE 5 GENE: CPS_0313; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYTOCHROME C, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR P.B.HARVILLA,H.N.WOLCOTT,J.S.MAGYAR,L.S.SHAPIRO REVDAT 5 20-SEP-23 4O1W 1 REMARK REVDAT 4 10-MAR-21 4O1W 1 COMPND REMARK HET HETNAM REVDAT 4 2 1 HETSYN FORMUL LINK SITE REVDAT 4 3 1 ATOM REVDAT 3 18-JUN-14 4O1W 1 JRNL REVDAT 2 28-MAY-14 4O1W 1 JRNL REVDAT 1 23-APR-14 4O1W 0 JRNL AUTH P.B.HARVILLA,H.N.WOLCOTT,J.S.MAGYAR JRNL TITL THE STRUCTURE OF FERRICYTOCHROME C552 FROM THE PSYCHROPHILIC JRNL TITL 2 MARINE BACTERIUM COLWELLIA PSYCHRERYTHRAEA 34H. JRNL REF METALLOMICS V. 6 1126 2014 JRNL REFN ISSN 1756-5901 JRNL PMID 24727932 JRNL DOI 10.1039/C4MT00045E REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 34128 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9462 - 4.5660 1.00 2835 151 0.1540 0.1673 REMARK 3 2 4.5660 - 3.6313 1.00 2736 155 0.1367 0.1763 REMARK 3 3 3.6313 - 3.1744 1.00 2746 156 0.1710 0.2182 REMARK 3 4 3.1744 - 2.8851 1.00 2736 162 0.2014 0.2649 REMARK 3 5 2.8851 - 2.6788 1.00 2705 156 0.1967 0.2551 REMARK 3 6 2.6788 - 2.5212 0.99 2695 136 0.1903 0.2464 REMARK 3 7 2.5212 - 2.3952 0.99 2695 146 0.1947 0.2497 REMARK 3 8 2.3952 - 2.2911 0.99 2674 152 0.1845 0.2630 REMARK 3 9 2.2911 - 2.2030 0.99 2698 144 0.1725 0.2354 REMARK 3 10 2.2030 - 2.1270 0.99 2699 115 0.1678 0.2250 REMARK 3 11 2.1270 - 2.0606 0.98 2664 146 0.1664 0.2263 REMARK 3 12 2.0606 - 2.0018 0.92 2525 101 0.1664 0.2183 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 3777 REMARK 3 ANGLE : 1.527 5171 REMARK 3 CHIRALITY : 0.075 503 REMARK 3 PLANARITY : 0.009 649 REMARK 3 DIHEDRAL : 16.884 1325 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O1W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000083937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : BENT SINGLE SI(III) CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34186 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 19.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 19.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1CNO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2M LITHIUM SULFATE, REMARK 280 50MM TRIS, 5% TREHALOSE, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.14000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.52150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.14000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.52150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 80 REMARK 465 LYS D 80 REMARK 465 LYS F 80 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 LYS C 80 CG CD CE NZ REMARK 470 LYS E 80 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH E 222 O HOH E 229 1.82 REMARK 500 O HOH F 219 O HOH F 228 2.02 REMARK 500 O HOH A 233 O HOH A 250 2.09 REMARK 500 O PHE E 47 O HOH E 223 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 247 O HOH B 228 1565 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 53 72.00 -102.95 REMARK 500 ALA B 63 40.87 -108.28 REMARK 500 ASN E 53 72.25 -113.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 101 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 18 NE2 REMARK 620 2 HEC A 101 NA 90.6 REMARK 620 3 HEC A 101 NB 83.4 91.8 REMARK 620 4 HEC A 101 NC 89.4 177.5 90.7 REMARK 620 5 HEC A 101 ND 95.6 88.0 179.0 89.4 REMARK 620 6 MET A 57 SD 170.0 95.7 88.7 84.6 92.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 101 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 18 NE2 REMARK 620 2 HEC B 101 NA 88.8 REMARK 620 3 HEC B 101 NB 82.3 89.9 REMARK 620 4 HEC B 101 NC 92.1 176.3 86.7 REMARK 620 5 HEC B 101 ND 95.3 90.1 177.6 93.3 REMARK 620 6 MET B 57 SD 174.0 94.7 92.7 84.1 89.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 101 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 18 NE2 REMARK 620 2 HEC C 101 NA 91.6 REMARK 620 3 HEC C 101 NB 79.6 92.0 REMARK 620 4 HEC C 101 NC 89.5 178.9 88.1 REMARK 620 5 HEC C 101 ND 97.3 88.4 176.8 91.5 REMARK 620 6 MET C 57 SD 168.9 95.2 91.4 83.7 91.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC D 101 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 18 NE2 REMARK 620 2 HEC D 101 NA 85.8 REMARK 620 3 HEC D 101 NB 88.1 88.1 REMARK 620 4 HEC D 101 NC 93.3 179.1 92.0 REMARK 620 5 HEC D 101 ND 87.2 89.5 174.8 90.4 REMARK 620 6 MET D 57 SD 178.6 95.2 91.0 85.7 93.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC E 101 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 18 NE2 REMARK 620 2 HEC E 101 NA 88.2 REMARK 620 3 HEC E 101 NB 86.0 83.2 REMARK 620 4 HEC E 101 NC 90.6 178.9 96.5 REMARK 620 5 HEC E 101 ND 93.4 92.8 176.0 87.5 REMARK 620 6 MET E 57 SD 176.1 93.6 90.8 87.5 89.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC F 101 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS F 18 NE2 REMARK 620 2 HEC F 101 NA 87.4 REMARK 620 3 HEC F 101 NB 84.1 84.9 REMARK 620 4 HEC F 101 NC 87.9 175.2 95.8 REMARK 620 5 HEC F 101 ND 89.0 93.6 173.0 85.1 REMARK 620 6 MET F 57 SD 174.7 97.1 93.5 87.6 93.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC D 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG E 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC F 101 DBREF 4O1W A 2 80 UNP Q48A34 Q48A34_COLP3 22 100 DBREF 4O1W B 2 80 UNP Q48A34 Q48A34_COLP3 22 100 DBREF 4O1W C 2 80 UNP Q48A34 Q48A34_COLP3 22 100 DBREF 4O1W D 2 80 UNP Q48A34 Q48A34_COLP3 22 100 DBREF 4O1W E 2 80 UNP Q48A34 Q48A34_COLP3 22 100 DBREF 4O1W F 2 80 UNP Q48A34 Q48A34_COLP3 22 100 SEQRES 1 A 79 GLY ASP ALA ALA ALA GLY LYS ALA LYS SER VAL MET CYS SEQRES 2 A 79 ALA ALA CYS HIS GLY ALA ALA GLY VAL SER ALA VAL PRO SEQRES 3 A 79 THR TYR PRO ASN LEU ALA GLY GLN LYS GLU ALA TYR LEU SEQRES 4 A 79 THR LYS GLN LEU ASN ASP PHE LYS SER GLY LYS ARG ASN SEQRES 5 A 79 ASP PRO THR MET LYS GLY MET VAL MET ALA LEU SER PRO SEQRES 6 A 79 ALA ASP MET GLU ASN LEU ALA ALA TYR TYR ALA ASN MET SEQRES 7 A 79 LYS SEQRES 1 B 79 GLY ASP ALA ALA ALA GLY LYS ALA LYS SER VAL MET CYS SEQRES 2 B 79 ALA ALA CYS HIS GLY ALA ALA GLY VAL SER ALA VAL PRO SEQRES 3 B 79 THR TYR PRO ASN LEU ALA GLY GLN LYS GLU ALA TYR LEU SEQRES 4 B 79 THR LYS GLN LEU ASN ASP PHE LYS SER GLY LYS ARG ASN SEQRES 5 B 79 ASP PRO THR MET LYS GLY MET VAL MET ALA LEU SER PRO SEQRES 6 B 79 ALA ASP MET GLU ASN LEU ALA ALA TYR TYR ALA ASN MET SEQRES 7 B 79 LYS SEQRES 1 C 79 GLY ASP ALA ALA ALA GLY LYS ALA LYS SER VAL MET CYS SEQRES 2 C 79 ALA ALA CYS HIS GLY ALA ALA GLY VAL SER ALA VAL PRO SEQRES 3 C 79 THR TYR PRO ASN LEU ALA GLY GLN LYS GLU ALA TYR LEU SEQRES 4 C 79 THR LYS GLN LEU ASN ASP PHE LYS SER GLY LYS ARG ASN SEQRES 5 C 79 ASP PRO THR MET LYS GLY MET VAL MET ALA LEU SER PRO SEQRES 6 C 79 ALA ASP MET GLU ASN LEU ALA ALA TYR TYR ALA ASN MET SEQRES 7 C 79 LYS SEQRES 1 D 79 GLY ASP ALA ALA ALA GLY LYS ALA LYS SER VAL MET CYS SEQRES 2 D 79 ALA ALA CYS HIS GLY ALA ALA GLY VAL SER ALA VAL PRO SEQRES 3 D 79 THR TYR PRO ASN LEU ALA GLY GLN LYS GLU ALA TYR LEU SEQRES 4 D 79 THR LYS GLN LEU ASN ASP PHE LYS SER GLY LYS ARG ASN SEQRES 5 D 79 ASP PRO THR MET LYS GLY MET VAL MET ALA LEU SER PRO SEQRES 6 D 79 ALA ASP MET GLU ASN LEU ALA ALA TYR TYR ALA ASN MET SEQRES 7 D 79 LYS SEQRES 1 E 79 GLY ASP ALA ALA ALA GLY LYS ALA LYS SER VAL MET CYS SEQRES 2 E 79 ALA ALA CYS HIS GLY ALA ALA GLY VAL SER ALA VAL PRO SEQRES 3 E 79 THR TYR PRO ASN LEU ALA GLY GLN LYS GLU ALA TYR LEU SEQRES 4 E 79 THR LYS GLN LEU ASN ASP PHE LYS SER GLY LYS ARG ASN SEQRES 5 E 79 ASP PRO THR MET LYS GLY MET VAL MET ALA LEU SER PRO SEQRES 6 E 79 ALA ASP MET GLU ASN LEU ALA ALA TYR TYR ALA ASN MET SEQRES 7 E 79 LYS SEQRES 1 F 79 GLY ASP ALA ALA ALA GLY LYS ALA LYS SER VAL MET CYS SEQRES 2 F 79 ALA ALA CYS HIS GLY ALA ALA GLY VAL SER ALA VAL PRO SEQRES 3 F 79 THR TYR PRO ASN LEU ALA GLY GLN LYS GLU ALA TYR LEU SEQRES 4 F 79 THR LYS GLN LEU ASN ASP PHE LYS SER GLY LYS ARG ASN SEQRES 5 F 79 ASP PRO THR MET LYS GLY MET VAL MET ALA LEU SER PRO SEQRES 6 F 79 ALA ASP MET GLU ASN LEU ALA ALA TYR TYR ALA ASN MET SEQRES 7 F 79 LYS HET HEC A 101 43 HET HEC B 101 43 HET PEG B 102 7 HET HEC C 101 43 HET HEC D 101 43 HET SO4 D 102 5 HET HEC E 101 43 HET PEG E 102 7 HET HEC F 101 43 HETNAM HEC HEME C HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM SO4 SULFATE ION FORMUL 7 HEC 6(C34 H34 FE N4 O4) FORMUL 9 PEG 2(C4 H10 O3) FORMUL 12 SO4 O4 S 2- FORMUL 16 HOH *204(H2 O) HELIX 1 1 ASP A 3 LYS A 10 1 8 HELIX 2 2 SER A 11 GLY A 19 1 9 HELIX 3 3 LYS A 36 GLY A 50 1 15 HELIX 4 4 ASP A 54 MET A 62 1 9 HELIX 5 5 SER A 65 ASN A 78 1 14 HELIX 6 6 ASP B 3 SER B 11 1 9 HELIX 7 7 CYS B 14 GLY B 19 1 6 HELIX 8 8 LYS B 36 GLY B 50 1 15 HELIX 9 9 ASP B 54 VAL B 61 1 8 HELIX 10 10 MET B 62 LEU B 64 5 3 HELIX 11 11 SER B 65 ASN B 78 1 14 HELIX 12 12 ASP C 3 SER C 11 1 9 HELIX 13 13 SER C 11 GLY C 19 1 9 HELIX 14 14 LYS C 36 GLY C 50 1 15 HELIX 15 15 ASP C 54 VAL C 61 1 8 HELIX 16 16 SER C 65 ASN C 78 1 14 HELIX 17 17 ASP D 3 LYS D 10 1 8 HELIX 18 18 SER D 11 GLY D 19 1 9 HELIX 19 19 LYS D 36 SER D 49 1 14 HELIX 20 20 ASP D 54 MET D 62 1 9 HELIX 21 21 SER D 65 ASN D 78 1 14 HELIX 22 22 ASP E 3 SER E 11 1 9 HELIX 23 23 CYS E 14 GLY E 19 1 6 HELIX 24 24 LYS E 36 GLY E 50 1 15 HELIX 25 25 ASP E 54 VAL E 61 1 8 HELIX 26 26 MET E 62 LEU E 64 5 3 HELIX 27 27 SER E 65 ASN E 78 1 14 HELIX 28 28 ASP F 3 SER F 11 1 9 HELIX 29 29 CYS F 14 GLY F 19 1 6 HELIX 30 30 LYS F 36 GLY F 50 1 15 HELIX 31 31 ASP F 54 VAL F 61 1 8 HELIX 32 32 MET F 62 LEU F 64 5 3 HELIX 33 33 SER F 65 ASN F 78 1 14 LINK SG CYS A 14 CAB HEC A 101 1555 1555 2.43 LINK SG CYS A 17 CAC HEC A 101 1555 1555 2.54 LINK SG CYS B 14 CAB HEC B 101 1555 1555 2.42 LINK SG CYS B 17 CAC HEC B 101 1555 1555 2.48 LINK SG CYS C 14 CAB HEC C 101 1555 1555 2.50 LINK SG CYS C 17 CAC HEC C 101 1555 1555 2.55 LINK SG CYS D 14 CAB HEC D 101 1555 1555 2.44 LINK SG CYS D 17 CAC HEC D 101 1555 1555 2.52 LINK SG CYS E 14 CAB HEC E 101 1555 1555 2.47 LINK SG CYS E 17 CAC HEC E 101 1555 1555 2.61 LINK SG CYS F 14 CAB HEC F 101 1555 1555 2.42 LINK SG CYS F 17 CAC HEC F 101 1555 1555 2.56 LINK NE2 HIS A 18 FE HEC A 101 1555 1555 1.94 LINK SD MET A 57 FE HEC A 101 1555 1555 2.31 LINK NE2 HIS B 18 FE HEC B 101 1555 1555 1.99 LINK SD MET B 57 FE HEC B 101 1555 1555 2.32 LINK NE2 HIS C 18 FE HEC C 101 1555 1555 1.81 LINK SD MET C 57 FE HEC C 101 1555 1555 2.18 LINK NE2 HIS D 18 FE HEC D 101 1555 1555 1.93 LINK SD MET D 57 FE HEC D 101 1555 1555 2.27 LINK NE2 HIS E 18 FE HEC E 101 1555 1555 1.99 LINK SD MET E 57 FE HEC E 101 1555 1555 2.34 LINK NE2 HIS F 18 FE HEC F 101 1555 1555 1.96 LINK SD MET F 57 FE HEC F 101 1555 1555 2.29 SITE 1 AC1 23 MET A 13 CYS A 14 CYS A 17 HIS A 18 SITE 2 AC1 23 TYR A 29 PRO A 30 LEU A 32 TYR A 39 SITE 3 AC1 23 LEU A 40 GLN A 43 PHE A 47 ARG A 52 SITE 4 AC1 23 ASP A 54 MET A 57 MET A 60 HOH A 205 SITE 5 AC1 23 HOH A 209 HOH A 214 MET B 13 TYR D 39 SITE 6 AC1 23 LYS D 42 GLN D 43 HEC D 101 SITE 1 AC2 22 ALA A 16 TYR A 29 MET B 13 CYS B 14 SITE 2 AC2 22 CYS B 17 HIS B 18 TYR B 29 PRO B 30 SITE 3 AC2 22 LEU B 32 TYR B 39 PHE B 47 ARG B 52 SITE 4 AC2 22 ASP B 54 THR B 56 MET B 57 MET B 60 SITE 5 AC2 22 HOH B 203 HOH B 210 TYR C 39 LYS C 42 SITE 6 AC2 22 GLN C 43 HEC C 101 SITE 1 AC3 4 PRO A 55 GLY A 59 ALA B 9 LYS B 10 SITE 1 AC4 24 TYR B 39 LYS B 42 GLN B 43 HEC B 101 SITE 2 AC4 24 MET C 13 CYS C 14 CYS C 17 HIS C 18 SITE 3 AC4 24 TYR C 29 PRO C 30 LEU C 32 TYR C 39 SITE 4 AC4 24 LEU C 40 GLN C 43 LEU C 44 ARG C 52 SITE 5 AC4 24 ASP C 54 THR C 56 MET C 57 MET C 60 SITE 6 AC4 24 HOH C 203 HOH C 206 HOH C 212 MET E 13 SITE 1 AC5 22 TYR A 39 LYS A 42 GLN A 43 HEC A 101 SITE 2 AC5 22 MET D 13 CYS D 14 CYS D 17 HIS D 18 SITE 3 AC5 22 TYR D 29 PRO D 30 LEU D 32 TYR D 39 SITE 4 AC5 22 LEU D 40 GLN D 43 ARG D 52 ASP D 54 SITE 5 AC5 22 MET D 57 MET D 60 HOH D 203 HOH D 214 SITE 6 AC5 22 MET F 13 MET F 60 SITE 1 AC6 5 LYS D 36 GLU D 37 HOH D 212 HOH D 219 SITE 2 AC6 5 HOH D 222 SITE 1 AC7 23 ALA C 16 MET E 13 CYS E 14 CYS E 17 SITE 2 AC7 23 HIS E 18 TYR E 29 PRO E 30 LEU E 32 SITE 3 AC7 23 TYR E 39 LEU E 40 GLN E 43 ARG E 52 SITE 4 AC7 23 ASP E 54 THR E 56 MET E 57 MET E 60 SITE 5 AC7 23 HOH E 203 HOH E 217 HOH E 219 TYR F 39 SITE 6 AC7 23 LYS F 42 GLN F 43 HEC F 101 SITE 1 AC8 5 PRO C 55 GLY C 59 MET C 60 LYS E 10 SITE 2 AC8 5 MET E 13 SITE 1 AC9 21 ALA D 16 TYR D 29 TYR E 39 LYS E 42 SITE 2 AC9 21 GLN E 43 HEC E 101 MET F 13 CYS F 14 SITE 3 AC9 21 CYS F 17 HIS F 18 TYR F 29 PRO F 30 SITE 4 AC9 21 TYR F 39 GLN F 43 ARG F 52 ASP F 54 SITE 5 AC9 21 THR F 56 MET F 57 MET F 60 HOH F 202 SITE 6 AC9 21 HOH F 207 CRYST1 130.280 45.043 87.574 90.00 90.85 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007676 0.000000 0.000114 0.00000 SCALE2 0.000000 0.022201 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011420 0.00000