HEADER ISOMERASE 19-DEC-13 4O52 TITLE CRYSTAL STRUCTURE OF TRICHOMONAS VAGINALIS TRIOSEPHOSPHATE ISOMERASE TITLE 2 ILE45-VAL MUTANT (TVAG_497370) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.3.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHOMONAS VAGINALIS; SOURCE 3 ORGANISM_TAXID: 5722; SOURCE 4 GENE: TVAG_497370; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 STAR ROSSETAII; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET19B KEYWDS TIM BARREL, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.LARA-GONZALEZ,G.M.MONTERO-MORAN,C.G.BENITEZ-CARDOZA,L.G.BRIEBA REVDAT 3 28-FEB-24 4O52 1 REMARK SEQADV LINK REVDAT 2 07-MAR-18 4O52 1 REMARK REVDAT 1 24-DEC-14 4O52 0 JRNL AUTH S.LARA-GONZALEZ,G.M.MONTERO-MORAN,C.G.BENITEZ-CARDOZA, JRNL AUTH 2 L.G.BRIEBA JRNL TITL ENGINEERING MUTANTS WITH ALTERED DIMER-MONOMER EQUILIBRIUM JRNL TITL 2 REVEAL THE EXISTENCE OF STABLE MONOMERIC TRIOSEPHOSPHATE JRNL TITL 3 ISOMERASES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1396 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 20724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3235 - 3.7298 1.00 2979 157 0.1601 0.1666 REMARK 3 2 3.7298 - 2.9605 1.00 2832 149 0.1636 0.2025 REMARK 3 3 2.9605 - 2.5863 1.00 2812 148 0.1765 0.2363 REMARK 3 4 2.5863 - 2.3499 1.00 2778 146 0.1726 0.2289 REMARK 3 5 2.3499 - 2.1814 1.00 2799 148 0.1552 0.2191 REMARK 3 6 2.1814 - 2.0528 1.00 2748 144 0.1693 0.2406 REMARK 3 7 2.0528 - 1.9500 1.00 2741 143 0.1879 0.2444 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 1915 REMARK 3 ANGLE : 1.444 2591 REMARK 3 CHIRALITY : 0.099 297 REMARK 3 PLANARITY : 0.007 339 REMARK 3 DIHEDRAL : 12.142 668 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:17) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4565 4.4676 -15.0627 REMARK 3 T TENSOR REMARK 3 T11: 0.0935 T22: 0.1156 REMARK 3 T33: 0.1066 T12: 0.0056 REMARK 3 T13: 0.0068 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 0.3798 L22: 0.0524 REMARK 3 L33: 0.3281 L12: 0.0409 REMARK 3 L13: 0.0016 L23: 0.1260 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.0647 S13: -0.0104 REMARK 3 S21: -0.1053 S22: -0.1356 S23: -0.1824 REMARK 3 S31: 0.1017 S32: 0.0977 S33: -0.0007 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 18:28) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9222 -2.0818 -14.2828 REMARK 3 T TENSOR REMARK 3 T11: 0.1111 T22: 0.1932 REMARK 3 T33: 0.1835 T12: 0.0087 REMARK 3 T13: 0.0193 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 0.0764 L22: 0.4003 REMARK 3 L33: 1.5427 L12: -0.1740 REMARK 3 L13: -0.3416 L23: 0.7855 REMARK 3 S TENSOR REMARK 3 S11: -0.0679 S12: 0.2304 S13: -0.2206 REMARK 3 S21: 0.1583 S22: -0.0119 S23: -0.0475 REMARK 3 S31: 0.2753 S32: 0.1429 S33: -0.0111 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 29:35) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6891 12.0436 -25.0934 REMARK 3 T TENSOR REMARK 3 T11: 0.1248 T22: 0.2701 REMARK 3 T33: 0.2022 T12: -0.0249 REMARK 3 T13: -0.0234 T23: 0.0682 REMARK 3 L TENSOR REMARK 3 L11: 3.1963 L22: 0.5129 REMARK 3 L33: 4.0018 L12: -1.2042 REMARK 3 L13: -1.1165 L23: -0.0419 REMARK 3 S TENSOR REMARK 3 S11: 0.2851 S12: 0.6253 S13: 0.3635 REMARK 3 S21: -0.1495 S22: -0.0755 S23: -0.0147 REMARK 3 S31: -0.3261 S32: 0.1969 S33: 0.5245 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 36:87) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5660 7.1920 -3.5566 REMARK 3 T TENSOR REMARK 3 T11: 0.1094 T22: 0.0963 REMARK 3 T33: 0.1110 T12: -0.0174 REMARK 3 T13: -0.0056 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 0.0929 L22: 0.2724 REMARK 3 L33: 0.6953 L12: 0.0069 REMARK 3 L13: 0.1288 L23: -0.3655 REMARK 3 S TENSOR REMARK 3 S11: 0.0016 S12: 0.0384 S13: 0.0324 REMARK 3 S21: 0.0513 S22: -0.0576 S23: -0.0616 REMARK 3 S31: -0.0665 S32: 0.1827 S33: 0.0014 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 88:124) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5972 10.7202 -4.8348 REMARK 3 T TENSOR REMARK 3 T11: 0.1093 T22: 0.0934 REMARK 3 T33: 0.0867 T12: -0.0030 REMARK 3 T13: -0.0096 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.3807 L22: 0.6350 REMARK 3 L33: 1.0493 L12: -0.3992 REMARK 3 L13: -0.0434 L23: -0.2132 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: -0.0917 S13: 0.0135 REMARK 3 S21: 0.0939 S22: -0.0599 S23: 0.0088 REMARK 3 S31: -0.1163 S32: -0.0262 S33: -0.0011 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 125:133) REMARK 3 ORIGIN FOR THE GROUP (A): -30.1938 7.1326 -18.0833 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.1374 REMARK 3 T33: 0.0796 T12: -0.0238 REMARK 3 T13: -0.0105 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 1.0665 L22: 0.2056 REMARK 3 L33: 2.2499 L12: -0.0946 REMARK 3 L13: 1.0508 L23: 0.3021 REMARK 3 S TENSOR REMARK 3 S11: -0.0750 S12: -0.1021 S13: 0.0127 REMARK 3 S21: 0.1251 S22: -0.0153 S23: 0.0136 REMARK 3 S31: -0.0793 S32: -0.2809 S33: -0.0615 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 134:149) REMARK 3 ORIGIN FOR THE GROUP (A): -31.6236 14.3663 -15.1801 REMARK 3 T TENSOR REMARK 3 T11: 0.1227 T22: 0.1749 REMARK 3 T33: 0.2181 T12: 0.0291 REMARK 3 T13: 0.0255 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.4652 L22: 0.4206 REMARK 3 L33: 1.0957 L12: -0.1368 REMARK 3 L13: 0.6257 L23: -0.4950 REMARK 3 S TENSOR REMARK 3 S11: -0.1568 S12: 0.0152 S13: 0.2275 REMARK 3 S21: 0.1692 S22: 0.1409 S23: 0.1414 REMARK 3 S31: -0.1892 S32: -0.2071 S33: 0.0552 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 150:169) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6518 17.1407 -11.9265 REMARK 3 T TENSOR REMARK 3 T11: 0.1484 T22: 0.0559 REMARK 3 T33: 0.1024 T12: 0.0054 REMARK 3 T13: -0.0344 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.4996 L22: 0.3719 REMARK 3 L33: 0.4170 L12: 0.1644 REMARK 3 L13: -0.3497 L23: 0.0792 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.0310 S13: 0.0036 REMARK 3 S21: 0.1164 S22: 0.0601 S23: -0.0033 REMARK 3 S31: -0.1284 S32: -0.0375 S33: 0.0055 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 170:187) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7960 8.2244 -25.9833 REMARK 3 T TENSOR REMARK 3 T11: 0.1362 T22: 0.1447 REMARK 3 T33: 0.1391 T12: 0.0054 REMARK 3 T13: 0.0032 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.2874 L22: 0.3352 REMARK 3 L33: 0.2507 L12: 0.2746 REMARK 3 L13: -0.1152 L23: -0.1643 REMARK 3 S TENSOR REMARK 3 S11: -0.1893 S12: 0.1775 S13: -0.0351 REMARK 3 S21: -0.0422 S22: 0.1970 S23: 0.0659 REMARK 3 S31: 0.0324 S32: -0.0398 S33: 0.0128 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 188:235) REMARK 3 ORIGIN FOR THE GROUP (A): -17.2869 15.6889 -22.3018 REMARK 3 T TENSOR REMARK 3 T11: 0.0972 T22: 0.1269 REMARK 3 T33: 0.1159 T12: -0.0001 REMARK 3 T13: -0.0160 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 0.6281 L22: 0.3825 REMARK 3 L33: 1.0481 L12: 0.1133 REMARK 3 L13: -0.0106 L23: -0.5747 REMARK 3 S TENSOR REMARK 3 S11: -0.0157 S12: 0.1197 S13: 0.0533 REMARK 3 S21: 0.0119 S22: -0.0261 S23: -0.0128 REMARK 3 S31: -0.1301 S32: -0.0033 S33: 0.0003 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 236:243) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9540 1.4459 -22.8910 REMARK 3 T TENSOR REMARK 3 T11: 0.1669 T22: 0.2458 REMARK 3 T33: 0.1050 T12: 0.0430 REMARK 3 T13: 0.0307 T23: 0.0332 REMARK 3 L TENSOR REMARK 3 L11: 0.5026 L22: 0.5138 REMARK 3 L33: 0.1372 L12: -0.3050 REMARK 3 L13: -0.2494 L23: 0.0854 REMARK 3 S TENSOR REMARK 3 S11: -0.0587 S12: 0.4795 S13: 0.0593 REMARK 3 S21: -0.3473 S22: -0.2329 S23: -0.1565 REMARK 3 S31: 0.2209 S32: 0.0128 S33: -0.1123 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 244:252) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8163 13.4116 -28.6089 REMARK 3 T TENSOR REMARK 3 T11: 0.0866 T22: 0.2078 REMARK 3 T33: 0.1154 T12: -0.0163 REMARK 3 T13: 0.0025 T23: 0.0673 REMARK 3 L TENSOR REMARK 3 L11: 1.1927 L22: 1.0534 REMARK 3 L33: 0.2807 L12: 0.7099 REMARK 3 L13: -0.1385 L23: 0.2372 REMARK 3 S TENSOR REMARK 3 S11: -0.0462 S12: 0.1375 S13: 0.2420 REMARK 3 S21: -0.1798 S22: 0.0570 S23: 0.0471 REMARK 3 S31: 0.0107 S32: 0.0921 S33: -0.3507 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O52 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084051. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5419 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20768 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 55.858 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.37100 REMARK 200 R SYM FOR SHELL (I) : 0.37100 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 CITRATE, 30% PEG 4000, PH 5.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.92900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.47000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.92900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.47000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 GLU A 25 CG CD OE1 OE2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 GLN A 52 CG CD OE1 NE2 REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 LYS A 175 CG CD CE NZ REMARK 470 GLN A 180 CG CD OE1 NE2 REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 LYS A 252 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 11 -144.54 56.94 REMARK 500 ASP A 99 -70.88 -87.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 156 O REMARK 620 2 ASP A 159 OD2 122.5 REMARK 620 3 ASP A 159 OD1 75.0 52.2 REMARK 620 4 HOH A 490 O 111.1 91.2 89.2 REMARK 620 5 HOH A 491 O 79.9 83.0 94.6 169.0 REMARK 620 6 HOH A 497 O 77.1 159.9 141.1 76.1 106.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 222 O REMARK 620 2 CYS A 224 O 94.5 REMARK 620 3 VAL A 227 O 110.4 95.1 REMARK 620 4 SER A 251 OG 83.0 158.7 105.7 REMARK 620 5 HOH A 484 O 151.1 91.3 97.2 81.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4O4V RELATED DB: PDB REMARK 900 RELATED ID: 4O4W RELATED DB: PDB REMARK 900 RELATED ID: 4O50 RELATED DB: PDB REMARK 900 RELATED ID: 4O53 RELATED DB: PDB REMARK 900 RELATED ID: 4O54 RELATED DB: PDB REMARK 900 RELATED ID: 4O57 RELATED DB: PDB REMARK 900 RELATED ID: 3QSR RELATED DB: PDB DBREF 4O52 A 1 252 UNP A2EGX9 A2EGX9_TRIVA 1 252 SEQADV 4O52 VAL A 45 UNP A2EGX9 ILE 45 ENGINEERED MUTATION SEQRES 1 A 252 MET ARG THR PHE PHE VAL GLY GLY ASN TRP LYS ALA ASN SEQRES 2 A 252 PRO LYS THR VAL GLU GLU ALA GLU LYS LEU ILE GLU MET SEQRES 3 A 252 LEU ASN GLY ALA LYS VAL GLU GLY ASN VAL GLU VAL VAL SEQRES 4 A 252 VAL ALA ALA PRO PHE VAL PHE LEU PRO THR LEU GLN GLN SEQRES 5 A 252 LYS LEU ARG LYS ASP TRP LYS VAL SER ALA GLU ASN VAL SEQRES 6 A 252 PHE THR LYS PRO ASN GLY ALA PHE THR GLY GLU VAL THR SEQRES 7 A 252 VAL PRO MET ILE LYS SER PHE GLY ILE GLU TRP THR ILE SEQRES 8 A 252 LEU GLY HIS SER GLU ARG ARG ASP ILE LEU LYS GLU ASP SEQRES 9 A 252 ASP GLU PHE LEU ALA ALA LYS ALA LYS PHE ALA LEU GLU SEQRES 10 A 252 ASN GLY MET LYS ILE ILE TYR CYS CYS GLY GLU HIS LEU SEQRES 11 A 252 SER GLU ARG GLU ALA GLY LYS ALA SER GLU PHE VAL SER SEQRES 12 A 252 ALA GLN ILE GLU LYS MET ILE PRO ALA ILE PRO ALA GLY SEQRES 13 A 252 LYS TRP ASP ASP VAL VAL ILE ALA TYR GLU PRO ILE TRP SEQRES 14 A 252 ALA ILE GLY THR GLY LYS VAL ALA SER THR GLN ASP ALA SEQRES 15 A 252 GLN GLU MET CYS LYS VAL ILE ARG ASP ILE LEU ALA ALA SEQRES 16 A 252 LYS VAL GLY ALA ASP ILE ALA ASN LYS VAL ARG ILE LEU SEQRES 17 A 252 TYR GLY GLY SER VAL LYS PRO ASN ASN CYS ASN GLU LEU SEQRES 18 A 252 ALA ALA CYS PRO ASP VAL ASP GLY PHE LEU VAL GLY GLY SEQRES 19 A 252 ALA SER LEU GLU PRO GLY PHE ILE ASN ILE VAL ASN SER SEQRES 20 A 252 ASN VAL HIS SER LYS HET NA A 301 1 HET NA A 302 1 HETNAM NA SODIUM ION FORMUL 2 NA 2(NA 1+) FORMUL 4 HOH *192(H2 O) HELIX 1 1 THR A 16 GLY A 29 1 14 HELIX 2 2 PRO A 43 VAL A 45 5 3 HELIX 3 3 PHE A 46 LEU A 54 1 9 HELIX 4 4 THR A 78 SER A 84 1 7 HELIX 5 5 HIS A 94 ILE A 100 1 7 HELIX 6 6 ASP A 104 ASN A 118 1 15 HELIX 7 7 HIS A 129 GLY A 136 1 8 HELIX 8 8 LYS A 137 ILE A 150 1 14 HELIX 9 9 PRO A 151 ILE A 153 5 3 HELIX 10 10 LYS A 157 ASP A 159 5 3 HELIX 11 11 PRO A 167 ILE A 171 5 5 HELIX 12 12 SER A 178 GLY A 198 1 21 HELIX 13 13 GLY A 198 VAL A 205 1 8 HELIX 14 14 ASN A 217 ALA A 223 1 7 HELIX 15 15 GLY A 233 GLU A 238 5 6 HELIX 16 16 PRO A 239 ASN A 246 1 8 HELIX 17 17 SER A 247 SER A 251 5 5 SHEET 1 A 9 PHE A 4 ASN A 9 0 SHEET 2 A 9 VAL A 36 ALA A 41 1 O ALA A 41 N GLY A 8 SHEET 3 A 9 LYS A 59 ALA A 62 1 O LYS A 59 N VAL A 40 SHEET 4 A 9 TRP A 89 LEU A 92 1 O TRP A 89 N ALA A 62 SHEET 5 A 9 LYS A 121 CYS A 126 1 O CYS A 125 N LEU A 92 SHEET 6 A 9 VAL A 161 TYR A 165 1 O VAL A 162 N TYR A 124 SHEET 7 A 9 ARG A 206 TYR A 209 1 O LEU A 208 N ILE A 163 SHEET 8 A 9 GLY A 229 VAL A 232 1 O GLY A 229 N TYR A 209 SHEET 9 A 9 PHE A 4 ASN A 9 1 N GLY A 7 O PHE A 230 LINK O GLY A 156 NA NA A 301 1555 1555 2.27 LINK OD2 ASP A 159 NA NA A 301 1555 1555 2.47 LINK OD1 ASP A 159 NA NA A 301 1555 1555 2.52 LINK O ALA A 222 NA NA A 302 1555 1555 2.34 LINK O CYS A 224 NA NA A 302 1555 1555 2.30 LINK O VAL A 227 NA NA A 302 1555 1555 2.36 LINK OG SER A 251 NA NA A 302 1555 1555 2.36 LINK NA NA A 301 O HOH A 490 1555 1555 2.32 LINK NA NA A 301 O HOH A 491 1555 1555 2.27 LINK NA NA A 301 O HOH A 497 1555 1555 2.43 LINK NA NA A 302 O HOH A 484 1555 1555 2.46 CISPEP 1 ASN A 13 PRO A 14 0 -6.04 SITE 1 AC1 5 GLY A 156 ASP A 159 HOH A 490 HOH A 491 SITE 2 AC1 5 HOH A 497 SITE 1 AC2 5 ALA A 222 CYS A 224 VAL A 227 SER A 251 SITE 2 AC2 5 HOH A 484 CRYST1 46.806 55.858 104.940 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021365 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017903 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009529 0.00000