HEADER OXIDOREDUCTASE 19-DEC-13 4O5O TITLE X-RAY CRYSTAL STRUCTURE OF A 3-HYDROXYACYL-COA DEHYDROGENASE FROM TITLE 2 BRUCELLA SUIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-HYDROXYACYL-COA DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA SUIS; SOURCE 3 ORGANISM_TAXID: 204722; SOURCE 4 STRAIN: 1330; SOURCE 5 GENE: BRA0449, BS1330_II0446; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 28-FEB-24 4O5O 1 REMARK SEQADV LINK REVDAT 1 01-JAN-14 4O5O 0 JRNL AUTH J.W.FAIRMAN,J.ABENDROTH,T.E.EDWARDS,D.LORIMER JRNL TITL X-RAY CRYSTAL STRUCTURE OF A 3-HYDROXYACYL-COA DEHYDROGENASE JRNL TITL 2 FROM BRUCELLA SUIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 92937 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4661 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6091 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.1620 REMARK 3 BIN FREE R VALUE SET COUNT : 334 REMARK 3 BIN FREE R VALUE : 0.2120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3677 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 601 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.23000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.053 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.031 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.543 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3788 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3751 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5139 ; 1.443 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8559 ; 0.799 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 529 ; 5.872 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;33.143 ;23.406 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 584 ;10.537 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;17.942 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 606 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4416 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 833 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2085 ; 1.570 ; 1.043 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2082 ; 1.572 ; 1.576 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2602 ; 1.914 ; 1.569 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3760 ; 2.267 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3700 ;10.628 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: REFINED INDIVIDUALLY REMARK 4 REMARK 4 4O5O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000084073. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92937 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 47.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.46100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 UL PROTEIN AT 19.86 MG/ML + 0.4 UL REMARK 280 JCSG+ D5 - 0.1 M HEPES PH 7.50, 70% MPD, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.74500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.74500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.23500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.12000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.23500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.12000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.74500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.23500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.12000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 67.74500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.23500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.12000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -183.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 67.74500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 544 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 668 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 GLY A 201 REMARK 465 MET A 202 REMARK 465 PRO A 203 REMARK 465 GLN A 204 REMARK 465 GLU A 205 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -5 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A -1 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 GLU A 99 CG CD OE1 OE2 REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 GLU A 105 CG CD OE1 OE2 REMARK 470 MET A 199 CG SD CE REMARK 470 VAL A 206 CG1 CG2 REMARK 470 GLN A 207 CG CD OE1 NE2 REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 HIS B -4 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 2 CG CD OE1 NE2 REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 ARG B 98 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 99 CG CD OE1 OE2 REMARK 470 GLN B 136 CG CD OE1 NE2 REMARK 470 LYS B 195 CG CD CE NZ REMARK 470 MET B 198 CG SD CE REMARK 470 LYS B 255 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 705 O HOH B 706 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 506 O HOH B 708 3555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 205 CD GLU B 205 OE2 0.081 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 147 -130.43 -94.80 REMARK 500 ASP A 247 7.77 -150.93 REMARK 500 HIS B 0 -72.60 -101.56 REMARK 500 ALA B 147 -128.84 -95.21 REMARK 500 ASP B 247 8.01 -152.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A -4 NE2 REMARK 620 2 HIS A 231 NE2 175.9 REMARK 620 3 GLU A 235 OE2 85.5 90.7 REMARK 620 4 GLU A 235 OE1 90.0 86.8 61.2 REMARK 620 5 HIS B -5 NE2 89.2 92.9 97.9 159.1 REMARK 620 6 HIS B -3 NE2 92.6 90.4 158.5 97.4 103.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BRSUA.00010.D RELATED DB: TARGETTRACK DBREF 4O5O A 1 255 UNP Q8FWK3 Q8FWK3_BRUSU 1 255 DBREF 4O5O B 1 255 UNP Q8FWK3 Q8FWK3_BRUSU 1 255 SEQADV 4O5O MET A -7 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O ALA A -6 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS A -5 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS A -4 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS A -3 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS A -2 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS A -1 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS A 0 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O MET B -7 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O ALA B -6 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS B -5 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS B -4 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS B -3 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS B -2 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS B -1 UNP Q8FWK3 EXPRESSION TAG SEQADV 4O5O HIS B 0 UNP Q8FWK3 EXPRESSION TAG SEQRES 1 A 263 MET ALA HIS HIS HIS HIS HIS HIS MET GLN ILE GLU ASN SEQRES 2 A 263 ARG VAL PHE LEU ILE THR GLY ALA GLY SER GLY LEU GLY SEQRES 3 A 263 ALA ALA VAL SER LYS MET ALA VAL GLU ALA GLY ALA LYS SEQRES 4 A 263 VAL VAL LEU LEU ASP VAL ASN ALA GLU ALA GLY GLU ALA SEQRES 5 A 263 GLY ALA LYS ALA LEU GLY ALA SER ALA ARG PHE GLN ARG SEQRES 6 A 263 THR ASP VAL ALA SER ASP THR ASP GLY LYS ALA ALA ILE SEQRES 7 A 263 ALA ALA ALA ILE GLU ALA PHE GLY ARG ILE ASP VAL LEU SEQRES 8 A 263 VAL ASN CYS ALA GLY VAL ALA PRO GLY GLU LYS VAL LEU SEQRES 9 A 263 GLY ARG GLU GLY ALA HIS LYS LEU GLU THR PHE THR ARG SEQRES 10 A 263 THR ILE SER ILE ASN LEU ILE GLY THR PHE ASN MET LEU SEQRES 11 A 263 ARG LEU ALA ALA GLU ALA MET ALA LYS ASN GLU PRO GLY SEQRES 12 A 263 GLN GLY GLY GLU ARG GLY VAL ILE ILE ASN THR ALA SER SEQRES 13 A 263 VAL ALA ALA PHE ASP GLY GLN ILE GLY GLN ALA ALA TYR SEQRES 14 A 263 SER ALA SER LYS GLY GLY VAL ALA ALA MET THR LEU PRO SEQRES 15 A 263 VAL ALA ARG GLU LEU ALA ARG HIS GLY ILE ARG VAL MET SEQRES 16 A 263 THR ILE ALA PRO GLY ILE PHE LYS THR PRO MET MET ALA SEQRES 17 A 263 GLY MET PRO GLN GLU VAL GLN ASP ALA LEU GLY ALA SER SEQRES 18 A 263 VAL PRO PHE PRO PRO ARG LEU GLY GLU PRO ALA GLU TYR SEQRES 19 A 263 ALA ALA LEU VAL HIS HIS ILE VAL GLU ASN GLN MET LEU SEQRES 20 A 263 ASN GLY GLU VAL ILE ARG LEU ASP GLY ALA LEU ARG MET SEQRES 21 A 263 ALA ALA LYS SEQRES 1 B 263 MET ALA HIS HIS HIS HIS HIS HIS MET GLN ILE GLU ASN SEQRES 2 B 263 ARG VAL PHE LEU ILE THR GLY ALA GLY SER GLY LEU GLY SEQRES 3 B 263 ALA ALA VAL SER LYS MET ALA VAL GLU ALA GLY ALA LYS SEQRES 4 B 263 VAL VAL LEU LEU ASP VAL ASN ALA GLU ALA GLY GLU ALA SEQRES 5 B 263 GLY ALA LYS ALA LEU GLY ALA SER ALA ARG PHE GLN ARG SEQRES 6 B 263 THR ASP VAL ALA SER ASP THR ASP GLY LYS ALA ALA ILE SEQRES 7 B 263 ALA ALA ALA ILE GLU ALA PHE GLY ARG ILE ASP VAL LEU SEQRES 8 B 263 VAL ASN CYS ALA GLY VAL ALA PRO GLY GLU LYS VAL LEU SEQRES 9 B 263 GLY ARG GLU GLY ALA HIS LYS LEU GLU THR PHE THR ARG SEQRES 10 B 263 THR ILE SER ILE ASN LEU ILE GLY THR PHE ASN MET LEU SEQRES 11 B 263 ARG LEU ALA ALA GLU ALA MET ALA LYS ASN GLU PRO GLY SEQRES 12 B 263 GLN GLY GLY GLU ARG GLY VAL ILE ILE ASN THR ALA SER SEQRES 13 B 263 VAL ALA ALA PHE ASP GLY GLN ILE GLY GLN ALA ALA TYR SEQRES 14 B 263 SER ALA SER LYS GLY GLY VAL ALA ALA MET THR LEU PRO SEQRES 15 B 263 VAL ALA ARG GLU LEU ALA ARG HIS GLY ILE ARG VAL MET SEQRES 16 B 263 THR ILE ALA PRO GLY ILE PHE LYS THR PRO MET MET ALA SEQRES 17 B 263 GLY MET PRO GLN GLU VAL GLN ASP ALA LEU GLY ALA SER SEQRES 18 B 263 VAL PRO PHE PRO PRO ARG LEU GLY GLU PRO ALA GLU TYR SEQRES 19 B 263 ALA ALA LEU VAL HIS HIS ILE VAL GLU ASN GLN MET LEU SEQRES 20 B 263 ASN GLY GLU VAL ILE ARG LEU ASP GLY ALA LEU ARG MET SEQRES 21 B 263 ALA ALA LYS HET ZN A 301 1 HET EDO B 301 4 HET EDO B 302 4 HET TRS B 303 16 HETNAM ZN ZINC ION HETNAM EDO 1,2-ETHANEDIOL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN EDO ETHYLENE GLYCOL HETSYN TRS TRIS BUFFER FORMUL 3 ZN ZN 2+ FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 TRS C4 H12 N O3 1+ FORMUL 7 HOH *601(H2 O) HELIX 1 1 SER A 15 ALA A 28 1 14 HELIX 2 2 ASN A 38 GLY A 50 1 13 HELIX 3 3 SER A 62 GLY A 78 1 17 HELIX 4 4 LYS A 103 LEU A 115 1 13 HELIX 5 5 LEU A 115 ALA A 130 1 16 HELIX 6 6 GLY A 135 GLU A 139 5 5 HELIX 7 7 VAL A 149 GLY A 154 1 6 HELIX 8 8 GLN A 158 ALA A 180 1 23 HELIX 9 9 THR A 196 ALA A 200 5 5 HELIX 10 10 GLN A 207 SER A 213 1 7 HELIX 11 11 GLU A 222 ASN A 236 1 15 HELIX 12 12 SER B 15 ALA B 28 1 14 HELIX 13 13 ASN B 38 GLY B 50 1 13 HELIX 14 14 SER B 62 GLY B 78 1 17 HELIX 15 15 LYS B 103 LEU B 115 1 13 HELIX 16 16 LEU B 115 ALA B 130 1 16 HELIX 17 17 GLY B 135 GLU B 139 5 5 HELIX 18 18 VAL B 149 GLY B 154 1 6 HELIX 19 19 GLN B 158 ALA B 180 1 23 HELIX 20 20 THR B 196 MET B 202 1 7 HELIX 21 21 PRO B 203 SER B 213 1 11 HELIX 22 22 GLU B 222 ASN B 236 1 15 SHEET 1 A 7 ALA A 53 ARG A 57 0 SHEET 2 A 7 LYS A 31 ASP A 36 1 N LEU A 34 O ARG A 54 SHEET 3 A 7 VAL A 7 THR A 11 1 N PHE A 8 O LYS A 31 SHEET 4 A 7 VAL A 82 ASN A 85 1 O VAL A 82 N LEU A 9 SHEET 5 A 7 GLY A 141 THR A 146 1 O ILE A 144 N LEU A 83 SHEET 6 A 7 ILE A 184 PRO A 191 1 O MET A 187 N ILE A 143 SHEET 7 A 7 VAL A 243 LEU A 246 1 O ILE A 244 N ALA A 190 SHEET 1 B 2 LEU A 96 GLY A 97 0 SHEET 2 B 2 GLY A 100 ALA A 101 -1 O GLY A 100 N GLY A 97 SHEET 1 C 7 ALA B 53 ARG B 57 0 SHEET 2 C 7 LYS B 31 ASP B 36 1 N LEU B 34 O ARG B 54 SHEET 3 C 7 VAL B 7 THR B 11 1 N PHE B 8 O LYS B 31 SHEET 4 C 7 VAL B 82 ASN B 85 1 O VAL B 82 N LEU B 9 SHEET 5 C 7 GLY B 141 THR B 146 1 O ILE B 144 N LEU B 83 SHEET 6 C 7 ILE B 184 PRO B 191 1 O MET B 187 N ASN B 145 SHEET 7 C 7 VAL B 243 LEU B 246 1 O ILE B 244 N ALA B 190 SHEET 1 D 2 LEU B 96 GLY B 97 0 SHEET 2 D 2 GLY B 100 ALA B 101 -1 O GLY B 100 N GLY B 97 LINK NE2 HIS A -4 ZN ZN A 301 1555 1555 2.19 LINK NE2 HIS A 231 ZN ZN A 301 1555 1555 2.13 LINK OE2 GLU A 235 ZN ZN A 301 1555 1555 2.13 LINK OE1 GLU A 235 ZN ZN A 301 1555 1555 2.17 LINK NE2 HIS B -5 ZN ZN A 301 1555 1555 2.13 LINK NE2 HIS B -3 ZN ZN A 301 1555 1555 2.20 CISPEP 1 PHE A 216 PRO A 217 0 3.83 CISPEP 2 PHE B 216 PRO B 217 0 3.43 SITE 1 AC1 5 HIS A -4 HIS A 231 GLU A 235 HIS B -3 SITE 2 AC1 5 HIS B -5 SITE 1 AC2 8 ARG A 181 HIS A 182 HOH A 449 LEU B 96 SITE 2 AC2 8 GLY B 97 ARG B 98 HOH B 615 HOH B 688 SITE 1 AC3 8 HOH A 426 VAL B 37 ASN B 38 ALA B 39 SITE 2 AC3 8 GLU B 40 HOH B 475 HOH B 525 HOH B 627 SITE 1 AC4 15 GLU A 242 VAL A 243 ARG A 245 PHE B 152 SITE 2 AC4 15 GLU B 242 VAL B 243 ARG B 245 HOH B 432 SITE 3 AC4 15 HOH B 445 HOH B 451 HOH B 493 HOH B 534 SITE 4 AC4 15 HOH B 549 HOH B 570 HOH B 579 CRYST1 76.470 92.240 135.490 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013077 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010841 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007381 0.00000