HEADER METAL/DNA BINDING PROTEIN 20-DEC-13 4O62 TITLE CW-TYPE ZINC FINGER OF ZCWPW2 IN COMPLEX WITH THE AMINO TERMINUS OF TITLE 2 HISTONE H3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER CW-TYPE PWWP DOMAIN PROTEIN 2; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 21-78; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE H3.3; COMPND 8 CHAIN: D; COMPND 9 FRAGMENT: UNP RESIDUES 2-12; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZCWPW2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3)-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A-MHL; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS ZINC FINGER, HISTONE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, METAL-DNA BINDING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,W.TEMPEL,A.DONG,P.LOPPNAU,C.BOUNTRA,J.WEIGELT,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,J.MIN,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 08-JUN-16 4O62 1 JRNL REVDAT 1 26-MAR-14 4O62 0 JRNL AUTH Y.LIU,W.TEMPEL,Q.ZHANG,X.LIANG,P.LOPPNAU,S.QIN,J.MIN JRNL TITL FAMILY-WIDE CHARACTERIZATION OF HISTONE BINDING ABILITIES OF JRNL TITL 2 HUMAN CW DOMAIN-CONTAINING PROTEINS. JRNL REF J.BIOL.CHEM. V. 291 9000 2016 JRNL REFN ISSN 0021-9258 JRNL PMID 26933034 JRNL DOI 10.1074/JBC.M116.718973 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36369 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS (SFTOOLS) REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1587 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2487 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 181 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1462 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 169 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.01000 REMARK 3 B22 (A**2) : -1.01000 REMARK 3 B33 (A**2) : 3.27000 REMARK 3 B12 (A**2) : -0.50000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.073 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.963 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1518 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1300 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2067 ; 1.370 ; 1.909 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3002 ; 0.747 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 181 ; 6.334 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;30.335 ;25.618 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 254 ;10.110 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.769 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 213 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1763 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 374 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 708 ; 2.489 ; 2.204 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 707 ; 2.448 ; 2.193 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 880 ; 3.334 ; 3.254 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5098 25.5864 33.5332 REMARK 3 T TENSOR REMARK 3 T11: 0.0112 T22: 0.1434 REMARK 3 T33: 0.0724 T12: -0.0210 REMARK 3 T13: -0.0199 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 5.5171 L22: 5.0101 REMARK 3 L33: 1.5066 L12: 3.9482 REMARK 3 L13: -0.2810 L23: 0.6302 REMARK 3 S TENSOR REMARK 3 S11: 0.0757 S12: -0.2547 S13: 0.1483 REMARK 3 S21: 0.0271 S22: -0.1686 S23: 0.3071 REMARK 3 S31: 0.0283 S32: -0.3733 S33: 0.0929 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0196 10.4628 29.5110 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.0482 REMARK 3 T33: 0.1691 T12: 0.0182 REMARK 3 T13: -0.0454 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 2.4753 L22: 7.3716 REMARK 3 L33: 2.1192 L12: -1.2657 REMARK 3 L13: 0.6308 L23: -2.1173 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: -0.1092 S13: -0.1149 REMARK 3 S21: 0.2519 S22: -0.0107 S23: -0.3406 REMARK 3 S31: 0.2406 S32: 0.2180 S33: 0.0094 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 21 C 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8601 34.2601 19.9439 REMARK 3 T TENSOR REMARK 3 T11: 0.0313 T22: 0.0147 REMARK 3 T33: 0.0239 T12: 0.0022 REMARK 3 T13: -0.0122 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.6500 L22: 6.6815 REMARK 3 L33: 2.8272 L12: 3.0707 REMARK 3 L13: -1.9472 L23: -2.6384 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: 0.0550 S13: -0.1315 REMARK 3 S21: -0.1589 S22: -0.1088 S23: -0.0963 REMARK 3 S31: 0.1567 S32: -0.0738 S33: 0.0858 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MODEL AUTO BUILDING WAS PERFORMED WIT REMARK 3 ARP/WARP. MANUAL MODEL BUILDING WAS DONE IN COOT. MODEL GEOMETRY REMARK 3 WAS VALIDATED WITH MOLPROBITY. REMARK 4 REMARK 4 4O62 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-DEC-13. REMARK 100 THE RCSB ID CODE IS RCSB084087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28303 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36371 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 41.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.01100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 2% PEG400, 0.1 M REMARK 280 SODIUM HEPES, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.54750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.68917 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.01533 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 63.54750 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 36.68917 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 21.01533 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 63.54750 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 36.68917 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.01533 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 73.37833 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 42.03067 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 73.37833 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 42.03067 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 73.37833 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 42.03067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 VAL A 21 REMARK 465 PHE A 78 REMARK 465 GLY B 20 REMARK 465 VAL B 21 REMARK 465 GLY C 20 REMARK 465 PHE C 78 REMARK 465 ALA D 7 REMARK 465 ARG D 8 REMARK 465 LYS D 9 REMARK 465 SER D 10 REMARK 465 THR D 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 LYS A 51 NZ REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 VAL C 21 N CA CB CG1 CG2 REMARK 470 ASP C 55 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 38 -71.51 -115.65 REMARK 500 CYS B 38 -75.86 -113.31 REMARK 500 TYR B 68 36.15 -144.09 REMARK 500 CYS C 38 -73.26 -118.10 REMARK 500 TYR C 68 42.72 -140.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 38 SG REMARK 620 2 CYS C 33 SG 113.3 REMARK 620 3 CYS C 71 SG 107.1 108.6 REMARK 620 4 CYS C 60 SG 108.2 106.1 113.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 71 SG REMARK 620 2 CYS B 60 SG 113.0 REMARK 620 3 CYS B 38 SG 108.7 109.4 REMARK 620 4 CYS B 33 SG 107.1 106.4 112.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 33 SG REMARK 620 2 CYS A 38 SG 114.3 REMARK 620 3 CYS A 60 SG 107.7 107.5 REMARK 620 4 CYS A 71 SG 107.4 107.0 113.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1001 DBREF 4O62 A 21 78 UNP Q504Y3 ZCPW2_HUMAN 21 78 DBREF 4O62 B 21 78 UNP Q504Y3 ZCPW2_HUMAN 21 78 DBREF 4O62 C 21 78 UNP Q504Y3 ZCPW2_HUMAN 21 78 DBREF 4O62 D 1 11 UNP K7ES00 K7ES00_HUMAN 2 12 SEQADV 4O62 GLY A 20 UNP Q504Y3 EXPRESSION TAG SEQADV 4O62 GLY B 20 UNP Q504Y3 EXPRESSION TAG SEQADV 4O62 GLY C 20 UNP Q504Y3 EXPRESSION TAG SEQRES 1 A 59 GLY VAL GLU ASN MET TYR VAL ASN LYS VAL TRP VAL GLN SEQRES 2 A 59 CYS GLU ASN GLU ASN CYS LEU LYS TRP ARG LEU LEU SER SEQRES 3 A 59 SER GLU ASP SER ALA LYS VAL ASP HIS ASP GLU PRO TRP SEQRES 4 A 59 TYR CYS PHE MET ASN THR ASP SER ARG TYR ASN ASN CYS SEQRES 5 A 59 SER ILE SER GLU GLU ASP PHE SEQRES 1 B 59 GLY VAL GLU ASN MET TYR VAL ASN LYS VAL TRP VAL GLN SEQRES 2 B 59 CYS GLU ASN GLU ASN CYS LEU LYS TRP ARG LEU LEU SER SEQRES 3 B 59 SER GLU ASP SER ALA LYS VAL ASP HIS ASP GLU PRO TRP SEQRES 4 B 59 TYR CYS PHE MET ASN THR ASP SER ARG TYR ASN ASN CYS SEQRES 5 B 59 SER ILE SER GLU GLU ASP PHE SEQRES 1 C 59 GLY VAL GLU ASN MET TYR VAL ASN LYS VAL TRP VAL GLN SEQRES 2 C 59 CYS GLU ASN GLU ASN CYS LEU LYS TRP ARG LEU LEU SER SEQRES 3 C 59 SER GLU ASP SER ALA LYS VAL ASP HIS ASP GLU PRO TRP SEQRES 4 C 59 TYR CYS PHE MET ASN THR ASP SER ARG TYR ASN ASN CYS SEQRES 5 C 59 SER ILE SER GLU GLU ASP PHE SEQRES 1 D 11 ALA ARG THR M3L GLN THR ALA ARG LYS SER THR MODRES 4O62 M3L D 4 LYS N-TRIMETHYLLYSINE HET M3L D 4 12 HET ZN A1001 1 HET UNX A1002 1 HET UNX A1003 1 HET UNX A1004 1 HET UNX A1005 1 HET UNX A1006 1 HET UNX A1007 1 HET UNX A1008 1 HET UNX A1009 1 HET UNX A1010 1 HET UNX A1011 1 HET UNX A1012 1 HET ZN B1001 1 HET UNX B1002 1 HET UNX B1003 1 HET UNX B1004 1 HET UNX B1005 1 HET UNX B1006 1 HET UNX B1007 1 HET UNX B1008 1 HET ZN C1001 1 HET UNX C1002 1 HET UNX C1003 1 HET UNX C1004 1 HET UNX C1005 1 HET UNX C1006 1 HET UNX C1007 1 HET UNX C1008 1 HET UNX C1009 1 HET UNX C1010 1 HETNAM M3L N-TRIMETHYLLYSINE HETNAM ZN ZINC ION HETNAM UNX UNKNOWN ATOM OR ION FORMUL 4 M3L C9 H21 N2 O2 1+ FORMUL 5 ZN 3(ZN 2+) FORMUL 6 UNX 27(X) FORMUL 35 HOH *169(H2 O) HELIX 1 1 SER A 45 VAL A 52 1 8 HELIX 2 2 TYR A 59 ASN A 63 5 5 HELIX 3 3 SER B 45 VAL B 52 1 8 HELIX 4 4 TYR B 59 ASN B 63 5 5 HELIX 5 5 SER C 45 VAL C 52 1 8 HELIX 6 6 TYR C 59 ASN C 63 5 5 SHEET 1 A 2 TRP A 30 GLN A 32 0 SHEET 2 A 2 TRP A 41 LEU A 43 -1 O ARG A 42 N VAL A 31 SHEET 1 B 3 TRP B 41 LEU B 43 0 SHEET 2 B 3 VAL B 29 GLN B 32 -1 N VAL B 31 O ARG B 42 SHEET 3 B 3 THR D 3 GLN D 5 -1 O M3L D 4 N TRP B 30 SHEET 1 C 2 TRP C 30 GLN C 32 0 SHEET 2 C 2 TRP C 41 LEU C 43 -1 O ARG C 42 N VAL C 31 LINK C THR D 3 N M3L D 4 1555 1555 1.34 LINK C M3L D 4 N GLN D 5 1555 1555 1.34 LINK SG CYS C 38 ZN ZN C1001 1555 1555 2.30 LINK SG CYS B 71 ZN ZN B1001 1555 1555 2.31 LINK SG CYS A 33 ZN ZN A1001 1555 1555 2.31 LINK SG CYS C 33 ZN ZN C1001 1555 1555 2.32 LINK SG CYS C 71 ZN ZN C1001 1555 1555 2.32 LINK SG CYS B 60 ZN ZN B1001 1555 1555 2.33 LINK SG CYS B 38 ZN ZN B1001 1555 1555 2.34 LINK SG CYS C 60 ZN ZN C1001 1555 1555 2.34 LINK SG CYS A 38 ZN ZN A1001 1555 1555 2.34 LINK SG CYS A 60 ZN ZN A1001 1555 1555 2.36 LINK SG CYS A 71 ZN ZN A1001 1555 1555 2.37 LINK SG CYS B 33 ZN ZN B1001 1555 1555 2.37 SITE 1 AC1 4 CYS A 33 CYS A 38 CYS A 60 CYS A 71 SITE 1 AC2 4 CYS B 33 CYS B 38 CYS B 60 CYS B 71 SITE 1 AC3 4 CYS C 33 CYS C 38 CYS C 60 CYS C 71 CRYST1 127.095 127.095 63.046 90.00 90.00 120.00 H 3 27 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007868 0.004543 0.000000 0.00000 SCALE2 0.000000 0.009085 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015861 0.00000