data_4O78 # _entry.id 4O78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4O78 pdb_00004o78 10.2210/pdb4o78/pdb RCSB RCSB084129 ? ? WWPDB D_1000084129 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4O70 . unspecified PDB 4O71 . unspecified PDB 4O72 . unspecified PDB 4O73 . unspecified PDB 4O74 . unspecified PDB 4O75 . unspecified PDB 4O76 . unspecified PDB 4O77 . unspecified PDB 4O7A . unspecified PDB 4O7B . unspecified PDB 4O7C . unspecified PDB 4O7E . unspecified PDB 4O7F . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4O78 _pdbx_database_status.recvd_initial_deposition_date 2013-12-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhu, J.-Y.' 1 'Ember, S.W.' 2 'Watts, C.' 3 'Schonbrunn, E.' 4 # _citation.id primary _citation.title 'Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors.' _citation.journal_abbrev 'Acs Chem.Biol.' _citation.journal_volume 9 _citation.page_first 1160 _citation.page_last 1171 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1554-8929 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24568369 _citation.pdbx_database_id_DOI 10.1021/cb500072z # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ember, S.W.' 1 ? primary 'Zhu, J.Y.' 2 ? primary 'Olesen, S.H.' 3 ? primary 'Martin, M.P.' 4 ? primary 'Becker, A.' 5 ? primary 'Berndt, N.' 6 ? primary 'Georg, G.I.' 7 ? primary 'Schonbrunn, E.' 8 ? # _cell.entry_id 4O78 _cell.length_a 37.252 _cell.length_b 46.465 _cell.length_c 77.826 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4O78 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 15099.380 1 ? ? 'UNP residues 44-168' ? 2 non-polymer syn 'N~4~-(3-methyl-1H-indazol-6-yl)-N~2~-(3,4,5-trimethoxyphenyl)pyrimidine-2,4-diamine' 406.438 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 227 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASN n 1 4 PRO n 1 5 PRO n 1 6 PRO n 1 7 PRO n 1 8 GLU n 1 9 THR n 1 10 SER n 1 11 ASN n 1 12 PRO n 1 13 ASN n 1 14 LYS n 1 15 PRO n 1 16 LYS n 1 17 ARG n 1 18 GLN n 1 19 THR n 1 20 ASN n 1 21 GLN n 1 22 LEU n 1 23 GLN n 1 24 TYR n 1 25 LEU n 1 26 LEU n 1 27 ARG n 1 28 VAL n 1 29 VAL n 1 30 LEU n 1 31 LYS n 1 32 THR n 1 33 LEU n 1 34 TRP n 1 35 LYS n 1 36 HIS n 1 37 GLN n 1 38 PHE n 1 39 ALA n 1 40 TRP n 1 41 PRO n 1 42 PHE n 1 43 GLN n 1 44 GLN n 1 45 PRO n 1 46 VAL n 1 47 ASP n 1 48 ALA n 1 49 VAL n 1 50 LYS n 1 51 LEU n 1 52 ASN n 1 53 LEU n 1 54 PRO n 1 55 ASP n 1 56 TYR n 1 57 TYR n 1 58 LYS n 1 59 ILE n 1 60 ILE n 1 61 LYS n 1 62 THR n 1 63 PRO n 1 64 MET n 1 65 ASP n 1 66 MET n 1 67 GLY n 1 68 THR n 1 69 ILE n 1 70 LYS n 1 71 LYS n 1 72 ARG n 1 73 LEU n 1 74 GLU n 1 75 ASN n 1 76 ASN n 1 77 TYR n 1 78 TYR n 1 79 TRP n 1 80 ASN n 1 81 ALA n 1 82 GLN n 1 83 GLU n 1 84 CYS n 1 85 ILE n 1 86 GLN n 1 87 ASP n 1 88 PHE n 1 89 ASN n 1 90 THR n 1 91 MET n 1 92 PHE n 1 93 THR n 1 94 ASN n 1 95 CYS n 1 96 TYR n 1 97 ILE n 1 98 TYR n 1 99 ASN n 1 100 LYS n 1 101 PRO n 1 102 GLY n 1 103 ASP n 1 104 ASP n 1 105 ILE n 1 106 VAL n 1 107 LEU n 1 108 MET n 1 109 ALA n 1 110 GLU n 1 111 ALA n 1 112 LEU n 1 113 GLU n 1 114 LYS n 1 115 LEU n 1 116 PHE n 1 117 LEU n 1 118 GLN n 1 119 LYS n 1 120 ILE n 1 121 ASN n 1 122 GLU n 1 123 LEU n 1 124 PRO n 1 125 THR n 1 126 GLU n 1 127 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PNIC28-BSA4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _struct_ref.pdbx_align_begin 44 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4O78 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 168 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4O78 SER A 1 ? UNP O60885 ? ? 'expression tag' 42 1 1 4O78 MET A 2 ? UNP O60885 ? ? 'expression tag' 43 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAV non-polymer . 'N~4~-(3-methyl-1H-indazol-6-yl)-N~2~-(3,4,5-trimethoxyphenyl)pyrimidine-2,4-diamine' ? 'C21 H22 N6 O3' 406.438 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4O78 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_percent_sol 44.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;12.5 MG/ML BRD4, 5MM HEPES pH 7.5, 50MM SODIUM CHLORIDE, 0.5MM DTT, 50MM TRIS PH8.5, 0.1M AMMONIUM SULFATE, 12.5% PEG 3,350, 10% DMSO, 1 MM GW612286X, VAPOR DIFFUSION, HANGING DROP, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2013-11-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'ROSENBAUM-ROCK DOUBLE-CRYSTAL SI(220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength 1.00 _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 4O78 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.34 _reflns.number_obs 24998 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_netI_over_sigmaI 50.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.34 _reflns_shell.d_res_low 1.36 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.150 _reflns_shell.meanI_over_sigI_obs 12.9 _reflns_shell.pdbx_redundancy 6.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4O78 _refine.ls_number_reflns_obs 24998 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.228 _refine.ls_d_res_high 1.34 _refine.ls_percent_reflns_obs 99.94 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.1188 _refine.ls_R_factor_R_free 0.1441 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 1553 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB entry 2OSS' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.07 _refine.pdbx_overall_phase_error 11.94 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.ls_R_factor_all ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1061 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 227 _refine_hist.number_atoms_total 1349 _refine_hist.d_res_high 1.34 _refine_hist.d_res_low 27.228 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 1231 ? 'X-RAY DIFFRACTION' f_angle_d 1.281 ? ? 1674 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.990 ? ? 485 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.072 ? ? 169 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 219 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.34 1.3839 2623 0.0876 99.00 0.1437 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.3839 1.4333 2640 0.0853 100.00 0.1295 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.4333 1.4907 2651 0.0889 100.00 0.1391 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.4907 1.5585 2630 0.0840 100.00 0.1308 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.5585 1.6407 2645 0.0887 100.00 0.1157 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.6407 1.7435 2648 0.0961 100.00 0.1396 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.7435 1.8781 2676 0.1039 100.00 0.1400 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.8781 2.0670 2671 0.1134 100.00 0.1287 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.0670 2.3659 2705 0.1121 100.00 0.1294 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.3659 2.9802 2728 0.1422 100.00 0.1435 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.9802 27.2333 2858 0.1574 100.00 0.1748 . . 152 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4O78 _struct.title 'Crystal structure of the first bromodomain of human BRD4 in complex with GW612286X' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4O78 _struct_keywords.pdbx_keywords TRANSCRIPTION/INHIBITOR _struct_keywords.text ;BROMODOMAIN, CAP, HUNK1, MCAP, PROTEIN BINDING-INHIBITOR COMPLEX, MITOTIC CHROMOSOME ASSOCIATED PROTEIN, CELL CYCLE, INHIBITOR, TRANSCRIPTION-INHIBITOR complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 19 ? VAL A 28 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 2 VAL A 28 ? LYS A 35 ? VAL A 69 LYS A 76 1 ? 8 HELX_P HELX_P3 3 ALA A 39 ? GLN A 43 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 4 ASP A 55 ? ILE A 60 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 5 ASP A 65 ? ASN A 75 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 6 ASN A 80 ? ASN A 99 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 7 ASP A 103 ? ASN A 121 ? ASP A 144 ASN A 162 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SAV 201 ? 14 'BINDING SITE FOR RESIDUE SAV A 201' AC2 Software A EDO 202 ? 6 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software A EDO 203 ? 6 'BINDING SITE FOR RESIDUE EDO A 203' AC4 Software A EDO 204 ? 3 'BINDING SITE FOR RESIDUE EDO A 204' AC5 Software A EDO 205 ? 6 'BINDING SITE FOR RESIDUE EDO A 205' AC6 Software A EDO 206 ? 4 'BINDING SITE FOR RESIDUE EDO A 206' AC7 Software A PGE 207 ? 9 'BINDING SITE FOR RESIDUE PGE A 207' AC8 Software A CL 208 ? 6 'BINDING SITE FOR RESIDUE CL A 208' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 TRP A 40 ? TRP A 81 . ? 1_555 ? 2 AC1 14 PRO A 41 ? PRO A 82 . ? 1_555 ? 3 AC1 14 PHE A 42 ? PHE A 83 . ? 1_555 ? 4 AC1 14 GLN A 44 ? GLN A 85 . ? 1_555 ? 5 AC1 14 LEU A 51 ? LEU A 92 . ? 1_555 ? 6 AC1 14 ASP A 55 ? ASP A 96 . ? 4_445 ? 7 AC1 14 LYS A 58 ? LYS A 99 . ? 4_445 ? 8 AC1 14 TYR A 98 ? TYR A 139 . ? 1_555 ? 9 AC1 14 ILE A 105 ? ILE A 146 . ? 1_555 ? 10 AC1 14 HOH J . ? HOH A 304 . ? 1_555 ? 11 AC1 14 HOH J . ? HOH A 312 . ? 1_555 ? 12 AC1 14 HOH J . ? HOH A 340 . ? 1_555 ? 13 AC1 14 HOH J . ? HOH A 422 . ? 1_555 ? 14 AC1 14 HOH J . ? HOH A 459 . ? 1_555 ? 15 AC2 6 ILE A 59 ? ILE A 100 . ? 1_555 ? 16 AC2 6 ILE A 60 ? ILE A 101 . ? 1_555 ? 17 AC2 6 LYS A 61 ? LYS A 102 . ? 1_555 ? 18 AC2 6 THR A 62 ? THR A 103 . ? 1_555 ? 19 AC2 6 ASN A 94 ? ASN A 135 . ? 1_555 ? 20 AC2 6 HOH J . ? HOH A 420 . ? 1_555 ? 21 AC3 6 PRO A 45 ? PRO A 86 . ? 1_555 ? 22 AC3 6 GLY A 67 ? GLY A 108 . ? 1_555 ? 23 AC3 6 THR A 68 ? THR A 109 . ? 1_555 ? 24 AC3 6 LYS A 71 ? LYS A 112 . ? 1_555 ? 25 AC3 6 HOH J . ? HOH A 505 . ? 1_555 ? 26 AC3 6 HOH J . ? HOH A 525 . ? 1_555 ? 27 AC4 3 LYS A 16 ? LYS A 57 . ? 1_555 ? 28 AC4 3 GLN A 18 ? GLN A 59 . ? 1_555 ? 29 AC4 3 ASN A 76 ? ASN A 117 . ? 1_555 ? 30 AC5 6 TYR A 96 ? TYR A 137 . ? 1_555 ? 31 AC5 6 ASN A 99 ? ASN A 140 . ? 1_555 ? 32 AC5 6 PRO A 101 ? PRO A 142 . ? 1_555 ? 33 AC5 6 HOH J . ? HOH A 329 . ? 4_555 ? 34 AC5 6 HOH J . ? HOH A 344 . ? 4_555 ? 35 AC5 6 HOH J . ? HOH A 484 . ? 4_555 ? 36 AC6 4 TRP A 40 ? TRP A 81 . ? 4_545 ? 37 AC6 4 PRO A 54 ? PRO A 95 . ? 1_555 ? 38 AC6 4 ASP A 55 ? ASP A 96 . ? 1_555 ? 39 AC6 4 TYR A 98 ? TYR A 139 . ? 1_555 ? 40 AC7 9 LYS A 50 ? LYS A 91 . ? 1_555 ? 41 AC7 9 LEU A 51 ? LEU A 92 . ? 1_555 ? 42 AC7 9 ASP A 55 ? ASP A 96 . ? 4_445 ? 43 AC7 9 ILE A 59 ? ILE A 100 . ? 4_445 ? 44 AC7 9 ILE A 97 ? ILE A 138 . ? 4_445 ? 45 AC7 9 TYR A 98 ? TYR A 139 . ? 4_445 ? 46 AC7 9 HOH J . ? HOH A 340 . ? 1_555 ? 47 AC7 9 HOH J . ? HOH A 399 . ? 4_445 ? 48 AC7 9 HOH J . ? HOH A 473 . ? 4_445 ? 49 AC8 6 PRO A 7 ? PRO A 48 . ? 1_555 ? 50 AC8 6 PRO A 63 ? PRO A 104 . ? 1_555 ? 51 AC8 6 MET A 64 ? MET A 105 . ? 1_555 ? 52 AC8 6 ASP A 65 ? ASP A 106 . ? 1_555 ? 53 AC8 6 HOH J . ? HOH A 319 . ? 1_555 ? 54 AC8 6 HOH J . ? HOH A 341 . ? 1_555 ? # _database_PDB_matrix.entry_id 4O78 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4O78 _atom_sites.fract_transf_matrix[1][1] 0.026844 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021522 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012849 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 42 42 SER SER A . n A 1 2 MET 2 43 43 MET MET A . n A 1 3 ASN 3 44 44 ASN ASN A . n A 1 4 PRO 4 45 45 PRO PRO A . n A 1 5 PRO 5 46 46 PRO PRO A . n A 1 6 PRO 6 47 47 PRO PRO A . n A 1 7 PRO 7 48 48 PRO PRO A . n A 1 8 GLU 8 49 49 GLU GLU A . n A 1 9 THR 9 50 50 THR THR A . n A 1 10 SER 10 51 51 SER SER A . n A 1 11 ASN 11 52 52 ASN ASN A . n A 1 12 PRO 12 53 53 PRO PRO A . n A 1 13 ASN 13 54 54 ASN ASN A . n A 1 14 LYS 14 55 55 LYS LYS A . n A 1 15 PRO 15 56 56 PRO PRO A . n A 1 16 LYS 16 57 57 LYS LYS A . n A 1 17 ARG 17 58 58 ARG ARG A . n A 1 18 GLN 18 59 59 GLN GLN A . n A 1 19 THR 19 60 60 THR THR A . n A 1 20 ASN 20 61 61 ASN ASN A . n A 1 21 GLN 21 62 62 GLN GLN A . n A 1 22 LEU 22 63 63 LEU LEU A . n A 1 23 GLN 23 64 64 GLN GLN A . n A 1 24 TYR 24 65 65 TYR TYR A . n A 1 25 LEU 25 66 66 LEU LEU A . n A 1 26 LEU 26 67 67 LEU LEU A . n A 1 27 ARG 27 68 68 ARG ARG A . n A 1 28 VAL 28 69 69 VAL VAL A . n A 1 29 VAL 29 70 70 VAL VAL A . n A 1 30 LEU 30 71 71 LEU LEU A . n A 1 31 LYS 31 72 72 LYS LYS A . n A 1 32 THR 32 73 73 THR THR A . n A 1 33 LEU 33 74 74 LEU LEU A . n A 1 34 TRP 34 75 75 TRP TRP A . n A 1 35 LYS 35 76 76 LYS LYS A . n A 1 36 HIS 36 77 77 HIS HIS A . n A 1 37 GLN 37 78 78 GLN GLN A . n A 1 38 PHE 38 79 79 PHE PHE A . n A 1 39 ALA 39 80 80 ALA ALA A . n A 1 40 TRP 40 81 81 TRP TRP A . n A 1 41 PRO 41 82 82 PRO PRO A . n A 1 42 PHE 42 83 83 PHE PHE A . n A 1 43 GLN 43 84 84 GLN GLN A . n A 1 44 GLN 44 85 85 GLN GLN A . n A 1 45 PRO 45 86 86 PRO PRO A . n A 1 46 VAL 46 87 87 VAL VAL A . n A 1 47 ASP 47 88 88 ASP ASP A . n A 1 48 ALA 48 89 89 ALA ALA A . n A 1 49 VAL 49 90 90 VAL VAL A . n A 1 50 LYS 50 91 91 LYS LYS A . n A 1 51 LEU 51 92 92 LEU LEU A . n A 1 52 ASN 52 93 93 ASN ASN A . n A 1 53 LEU 53 94 94 LEU LEU A . n A 1 54 PRO 54 95 95 PRO PRO A . n A 1 55 ASP 55 96 96 ASP ASP A . n A 1 56 TYR 56 97 97 TYR TYR A . n A 1 57 TYR 57 98 98 TYR TYR A . n A 1 58 LYS 58 99 99 LYS LYS A . n A 1 59 ILE 59 100 100 ILE ILE A . n A 1 60 ILE 60 101 101 ILE ILE A . n A 1 61 LYS 61 102 102 LYS LYS A . n A 1 62 THR 62 103 103 THR THR A . n A 1 63 PRO 63 104 104 PRO PRO A . n A 1 64 MET 64 105 105 MET MET A . n A 1 65 ASP 65 106 106 ASP ASP A . n A 1 66 MET 66 107 107 MET MET A . n A 1 67 GLY 67 108 108 GLY GLY A . n A 1 68 THR 68 109 109 THR THR A . n A 1 69 ILE 69 110 110 ILE ILE A . n A 1 70 LYS 70 111 111 LYS LYS A . n A 1 71 LYS 71 112 112 LYS LYS A . n A 1 72 ARG 72 113 113 ARG ARG A . n A 1 73 LEU 73 114 114 LEU LEU A . n A 1 74 GLU 74 115 115 GLU GLU A . n A 1 75 ASN 75 116 116 ASN ASN A . n A 1 76 ASN 76 117 117 ASN ASN A . n A 1 77 TYR 77 118 118 TYR TYR A . n A 1 78 TYR 78 119 119 TYR TYR A . n A 1 79 TRP 79 120 120 TRP TRP A . n A 1 80 ASN 80 121 121 ASN ASN A . n A 1 81 ALA 81 122 122 ALA ALA A . n A 1 82 GLN 82 123 123 GLN GLN A . n A 1 83 GLU 83 124 124 GLU GLU A . n A 1 84 CYS 84 125 125 CYS CYS A . n A 1 85 ILE 85 126 126 ILE ILE A . n A 1 86 GLN 86 127 127 GLN GLN A . n A 1 87 ASP 87 128 128 ASP ASP A . n A 1 88 PHE 88 129 129 PHE PHE A . n A 1 89 ASN 89 130 130 ASN ASN A . n A 1 90 THR 90 131 131 THR THR A . n A 1 91 MET 91 132 132 MET MET A . n A 1 92 PHE 92 133 133 PHE PHE A . n A 1 93 THR 93 134 134 THR THR A . n A 1 94 ASN 94 135 135 ASN ASN A . n A 1 95 CYS 95 136 136 CYS CYS A . n A 1 96 TYR 96 137 137 TYR TYR A . n A 1 97 ILE 97 138 138 ILE ILE A . n A 1 98 TYR 98 139 139 TYR TYR A . n A 1 99 ASN 99 140 140 ASN ASN A . n A 1 100 LYS 100 141 141 LYS LYS A . n A 1 101 PRO 101 142 142 PRO PRO A . n A 1 102 GLY 102 143 143 GLY GLY A . n A 1 103 ASP 103 144 144 ASP ASP A . n A 1 104 ASP 104 145 145 ASP ASP A . n A 1 105 ILE 105 146 146 ILE ILE A . n A 1 106 VAL 106 147 147 VAL VAL A . n A 1 107 LEU 107 148 148 LEU LEU A . n A 1 108 MET 108 149 149 MET MET A . n A 1 109 ALA 109 150 150 ALA ALA A . n A 1 110 GLU 110 151 151 GLU GLU A . n A 1 111 ALA 111 152 152 ALA ALA A . n A 1 112 LEU 112 153 153 LEU LEU A . n A 1 113 GLU 113 154 154 GLU GLU A . n A 1 114 LYS 114 155 155 LYS LYS A . n A 1 115 LEU 115 156 156 LEU LEU A . n A 1 116 PHE 116 157 157 PHE PHE A . n A 1 117 LEU 117 158 158 LEU LEU A . n A 1 118 GLN 118 159 159 GLN GLN A . n A 1 119 LYS 119 160 160 LYS LYS A . n A 1 120 ILE 120 161 161 ILE ILE A . n A 1 121 ASN 121 162 162 ASN ASN A . n A 1 122 GLU 122 163 163 GLU GLU A . n A 1 123 LEU 123 164 164 LEU LEU A . n A 1 124 PRO 124 165 165 PRO PRO A . n A 1 125 THR 125 166 166 THR THR A . n A 1 126 GLU 126 167 167 GLU GLU A . n A 1 127 GLU 127 168 168 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAV 1 201 1 SAV SAV A . C 3 EDO 1 202 1 EDO EDO A . D 3 EDO 1 203 2 EDO EDO A . E 3 EDO 1 204 3 EDO EDO A . F 3 EDO 1 205 6 EDO EDO A . G 3 EDO 1 206 8 EDO EDO A . H 4 PGE 1 207 1 PGE PGE A . I 5 CL 1 208 1 CL CL A . J 6 HOH 1 301 1 HOH HOH A . J 6 HOH 2 302 2 HOH HOH A . J 6 HOH 3 303 3 HOH HOH A . J 6 HOH 4 304 4 HOH HOH A . J 6 HOH 5 305 5 HOH HOH A . J 6 HOH 6 306 6 HOH HOH A . J 6 HOH 7 307 7 HOH HOH A . J 6 HOH 8 308 8 HOH HOH A . J 6 HOH 9 309 9 HOH HOH A . J 6 HOH 10 310 10 HOH HOH A . J 6 HOH 11 311 11 HOH HOH A . J 6 HOH 12 312 12 HOH HOH A . J 6 HOH 13 313 13 HOH HOH A . J 6 HOH 14 314 14 HOH HOH A . J 6 HOH 15 315 15 HOH HOH A . J 6 HOH 16 316 16 HOH HOH A . J 6 HOH 17 317 17 HOH HOH A . J 6 HOH 18 318 18 HOH HOH A . J 6 HOH 19 319 19 HOH HOH A . J 6 HOH 20 320 20 HOH HOH A . J 6 HOH 21 321 21 HOH HOH A . J 6 HOH 22 322 22 HOH HOH A . J 6 HOH 23 323 23 HOH HOH A . J 6 HOH 24 324 24 HOH HOH A . J 6 HOH 25 325 25 HOH HOH A . J 6 HOH 26 326 26 HOH HOH A . J 6 HOH 27 327 27 HOH HOH A . J 6 HOH 28 328 28 HOH HOH A . J 6 HOH 29 329 29 HOH HOH A . J 6 HOH 30 330 30 HOH HOH A . J 6 HOH 31 331 31 HOH HOH A . J 6 HOH 32 332 32 HOH HOH A . J 6 HOH 33 333 33 HOH HOH A . J 6 HOH 34 334 34 HOH HOH A . J 6 HOH 35 335 35 HOH HOH A . J 6 HOH 36 336 36 HOH HOH A . J 6 HOH 37 337 37 HOH HOH A . J 6 HOH 38 338 38 HOH HOH A . J 6 HOH 39 339 39 HOH HOH A . J 6 HOH 40 340 40 HOH HOH A . J 6 HOH 41 341 41 HOH HOH A . J 6 HOH 42 342 42 HOH HOH A . J 6 HOH 43 343 43 HOH HOH A . J 6 HOH 44 344 44 HOH HOH A . J 6 HOH 45 345 45 HOH HOH A . J 6 HOH 46 346 46 HOH HOH A . J 6 HOH 47 347 47 HOH HOH A . J 6 HOH 48 348 48 HOH HOH A . J 6 HOH 49 349 49 HOH HOH A . J 6 HOH 50 350 50 HOH HOH A . J 6 HOH 51 351 51 HOH HOH A . J 6 HOH 52 352 52 HOH HOH A . J 6 HOH 53 353 53 HOH HOH A . J 6 HOH 54 354 54 HOH HOH A . J 6 HOH 55 355 55 HOH HOH A . J 6 HOH 56 356 56 HOH HOH A . J 6 HOH 57 357 57 HOH HOH A . J 6 HOH 58 358 58 HOH HOH A . J 6 HOH 59 359 59 HOH HOH A . J 6 HOH 60 360 60 HOH HOH A . J 6 HOH 61 361 61 HOH HOH A . J 6 HOH 62 362 62 HOH HOH A . J 6 HOH 63 363 63 HOH HOH A . J 6 HOH 64 364 64 HOH HOH A . J 6 HOH 65 365 65 HOH HOH A . J 6 HOH 66 366 66 HOH HOH A . J 6 HOH 67 367 67 HOH HOH A . J 6 HOH 68 368 68 HOH HOH A . J 6 HOH 69 369 69 HOH HOH A . J 6 HOH 70 370 70 HOH HOH A . J 6 HOH 71 371 71 HOH HOH A . J 6 HOH 72 372 72 HOH HOH A . J 6 HOH 73 373 73 HOH HOH A . J 6 HOH 74 374 74 HOH HOH A . J 6 HOH 75 375 75 HOH HOH A . J 6 HOH 76 376 76 HOH HOH A . J 6 HOH 77 377 77 HOH HOH A . J 6 HOH 78 378 78 HOH HOH A . J 6 HOH 79 379 79 HOH HOH A . J 6 HOH 80 380 80 HOH HOH A . J 6 HOH 81 381 81 HOH HOH A . J 6 HOH 82 382 82 HOH HOH A . J 6 HOH 83 383 83 HOH HOH A . J 6 HOH 84 384 84 HOH HOH A . J 6 HOH 85 385 85 HOH HOH A . J 6 HOH 86 386 86 HOH HOH A . J 6 HOH 87 387 87 HOH HOH A . J 6 HOH 88 388 88 HOH HOH A . J 6 HOH 89 389 89 HOH HOH A . J 6 HOH 90 390 90 HOH HOH A . J 6 HOH 91 391 91 HOH HOH A . J 6 HOH 92 392 92 HOH HOH A . J 6 HOH 93 393 93 HOH HOH A . J 6 HOH 94 394 94 HOH HOH A . J 6 HOH 95 395 95 HOH HOH A . J 6 HOH 96 396 96 HOH HOH A . J 6 HOH 97 397 97 HOH HOH A . J 6 HOH 98 398 98 HOH HOH A . J 6 HOH 99 399 99 HOH HOH A . J 6 HOH 100 400 100 HOH HOH A . J 6 HOH 101 401 101 HOH HOH A . J 6 HOH 102 402 102 HOH HOH A . J 6 HOH 103 403 103 HOH HOH A . J 6 HOH 104 404 104 HOH HOH A . J 6 HOH 105 405 105 HOH HOH A . J 6 HOH 106 406 106 HOH HOH A . J 6 HOH 107 407 107 HOH HOH A . J 6 HOH 108 408 108 HOH HOH A . J 6 HOH 109 409 109 HOH HOH A . J 6 HOH 110 410 110 HOH HOH A . J 6 HOH 111 411 111 HOH HOH A . J 6 HOH 112 412 112 HOH HOH A . J 6 HOH 113 413 113 HOH HOH A . J 6 HOH 114 414 114 HOH HOH A . J 6 HOH 115 415 115 HOH HOH A . J 6 HOH 116 416 116 HOH HOH A . J 6 HOH 117 417 117 HOH HOH A . J 6 HOH 118 418 118 HOH HOH A . J 6 HOH 119 419 119 HOH HOH A . J 6 HOH 120 420 120 HOH HOH A . J 6 HOH 121 421 121 HOH HOH A . J 6 HOH 122 422 122 HOH HOH A . J 6 HOH 123 423 123 HOH HOH A . J 6 HOH 124 424 124 HOH HOH A . J 6 HOH 125 425 125 HOH HOH A . J 6 HOH 126 426 126 HOH HOH A . J 6 HOH 127 427 127 HOH HOH A . J 6 HOH 128 428 128 HOH HOH A . J 6 HOH 129 429 129 HOH HOH A . J 6 HOH 130 430 130 HOH HOH A . J 6 HOH 131 431 131 HOH HOH A . J 6 HOH 132 432 132 HOH HOH A . J 6 HOH 133 433 133 HOH HOH A . J 6 HOH 134 434 134 HOH HOH A . J 6 HOH 135 435 135 HOH HOH A . J 6 HOH 136 436 136 HOH HOH A . J 6 HOH 137 437 137 HOH HOH A . J 6 HOH 138 438 138 HOH HOH A . J 6 HOH 139 439 139 HOH HOH A . J 6 HOH 140 440 140 HOH HOH A . J 6 HOH 141 441 141 HOH HOH A . J 6 HOH 142 442 142 HOH HOH A . J 6 HOH 143 443 143 HOH HOH A . J 6 HOH 144 444 144 HOH HOH A . J 6 HOH 145 445 145 HOH HOH A . J 6 HOH 146 446 146 HOH HOH A . J 6 HOH 147 447 147 HOH HOH A . J 6 HOH 148 448 148 HOH HOH A . J 6 HOH 149 449 149 HOH HOH A . J 6 HOH 150 450 150 HOH HOH A . J 6 HOH 151 451 151 HOH HOH A . J 6 HOH 152 452 152 HOH HOH A . J 6 HOH 153 453 153 HOH HOH A . J 6 HOH 154 454 154 HOH HOH A . J 6 HOH 155 455 155 HOH HOH A . J 6 HOH 156 456 156 HOH HOH A . J 6 HOH 157 457 157 HOH HOH A . J 6 HOH 158 458 158 HOH HOH A . J 6 HOH 159 459 159 HOH HOH A . J 6 HOH 160 460 160 HOH HOH A . J 6 HOH 161 461 161 HOH HOH A . J 6 HOH 162 462 162 HOH HOH A . J 6 HOH 163 463 163 HOH HOH A . J 6 HOH 164 464 164 HOH HOH A . J 6 HOH 165 465 165 HOH HOH A . J 6 HOH 166 466 166 HOH HOH A . J 6 HOH 167 467 167 HOH HOH A . J 6 HOH 168 468 168 HOH HOH A . J 6 HOH 169 469 169 HOH HOH A . J 6 HOH 170 470 170 HOH HOH A . J 6 HOH 171 471 171 HOH HOH A . J 6 HOH 172 472 172 HOH HOH A . J 6 HOH 173 473 173 HOH HOH A . J 6 HOH 174 474 174 HOH HOH A . J 6 HOH 175 475 175 HOH HOH A . J 6 HOH 176 476 176 HOH HOH A . J 6 HOH 177 477 177 HOH HOH A . J 6 HOH 178 478 178 HOH HOH A . J 6 HOH 179 479 179 HOH HOH A . J 6 HOH 180 480 180 HOH HOH A . J 6 HOH 181 481 181 HOH HOH A . J 6 HOH 182 482 182 HOH HOH A . J 6 HOH 183 483 183 HOH HOH A . J 6 HOH 184 484 184 HOH HOH A . J 6 HOH 185 485 185 HOH HOH A . J 6 HOH 186 486 186 HOH HOH A . J 6 HOH 187 487 187 HOH HOH A . J 6 HOH 188 488 188 HOH HOH A . J 6 HOH 189 489 189 HOH HOH A . J 6 HOH 190 490 190 HOH HOH A . J 6 HOH 191 491 191 HOH HOH A . J 6 HOH 192 492 192 HOH HOH A . J 6 HOH 193 493 193 HOH HOH A . J 6 HOH 194 494 194 HOH HOH A . J 6 HOH 195 495 195 HOH HOH A . J 6 HOH 196 496 196 HOH HOH A . J 6 HOH 197 497 197 HOH HOH A . J 6 HOH 198 498 198 HOH HOH A . J 6 HOH 199 499 199 HOH HOH A . J 6 HOH 200 500 200 HOH HOH A . J 6 HOH 201 501 201 HOH HOH A . J 6 HOH 202 502 202 HOH HOH A . J 6 HOH 203 503 203 HOH HOH A . J 6 HOH 204 504 204 HOH HOH A . J 6 HOH 205 505 205 HOH HOH A . J 6 HOH 206 506 206 HOH HOH A . J 6 HOH 207 507 207 HOH HOH A . J 6 HOH 208 508 208 HOH HOH A . J 6 HOH 209 509 209 HOH HOH A . J 6 HOH 210 510 210 HOH HOH A . J 6 HOH 211 511 211 HOH HOH A . J 6 HOH 212 512 212 HOH HOH A . J 6 HOH 213 513 213 HOH HOH A . J 6 HOH 214 514 214 HOH HOH A . J 6 HOH 215 515 215 HOH HOH A . J 6 HOH 216 516 216 HOH HOH A . J 6 HOH 217 517 217 HOH HOH A . J 6 HOH 218 518 218 HOH HOH A . J 6 HOH 219 519 219 HOH HOH A . J 6 HOH 220 520 220 HOH HOH A . J 6 HOH 221 521 221 HOH HOH A . J 6 HOH 222 522 222 HOH HOH A . J 6 HOH 223 523 223 HOH HOH A . J 6 HOH 224 524 224 HOH HOH A . J 6 HOH 225 525 225 HOH HOH A . J 6 HOH 226 526 226 HOH HOH A . J 6 HOH 227 527 227 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-05 2 'Structure model' 1 1 2014-03-19 3 'Structure model' 1 2 2014-05-28 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SERGUI 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HD1 A HIS 77 ? ? H A PHE 79 ? ? 1.35 2 1 O A HOH 476 ? ? O A HOH 477 ? ? 2.00 3 1 OD1 A ASN 130 ? B O A HOH 476 ? ? 2.04 4 1 OD1 A ASN 162 ? A O A HOH 404 ? ? 2.13 5 1 OE1 A GLN 127 ? ? O A HOH 424 ? ? 2.13 6 1 O A HOH 421 ? ? O A HOH 456 ? ? 2.16 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 383 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 407 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_455 _pdbx_validate_symm_contact.dist 2.13 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 52 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -169.56 _pdbx_validate_torsion.psi 118.82 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 EDO C1 C N N 89 EDO O1 O N N 90 EDO C2 C N N 91 EDO O2 O N N 92 EDO H11 H N N 93 EDO H12 H N N 94 EDO HO1 H N N 95 EDO H21 H N N 96 EDO H22 H N N 97 EDO HO2 H N N 98 GLN N N N N 99 GLN CA C N S 100 GLN C C N N 101 GLN O O N N 102 GLN CB C N N 103 GLN CG C N N 104 GLN CD C N N 105 GLN OE1 O N N 106 GLN NE2 N N N 107 GLN OXT O N N 108 GLN H H N N 109 GLN H2 H N N 110 GLN HA H N N 111 GLN HB2 H N N 112 GLN HB3 H N N 113 GLN HG2 H N N 114 GLN HG3 H N N 115 GLN HE21 H N N 116 GLN HE22 H N N 117 GLN HXT H N N 118 GLU N N N N 119 GLU CA C N S 120 GLU C C N N 121 GLU O O N N 122 GLU CB C N N 123 GLU CG C N N 124 GLU CD C N N 125 GLU OE1 O N N 126 GLU OE2 O N N 127 GLU OXT O N N 128 GLU H H N N 129 GLU H2 H N N 130 GLU HA H N N 131 GLU HB2 H N N 132 GLU HB3 H N N 133 GLU HG2 H N N 134 GLU HG3 H N N 135 GLU HE2 H N N 136 GLU HXT H N N 137 GLY N N N N 138 GLY CA C N N 139 GLY C C N N 140 GLY O O N N 141 GLY OXT O N N 142 GLY H H N N 143 GLY H2 H N N 144 GLY HA2 H N N 145 GLY HA3 H N N 146 GLY HXT H N N 147 HIS N N N N 148 HIS CA C N S 149 HIS C C N N 150 HIS O O N N 151 HIS CB C N N 152 HIS CG C Y N 153 HIS ND1 N Y N 154 HIS CD2 C Y N 155 HIS CE1 C Y N 156 HIS NE2 N Y N 157 HIS OXT O N N 158 HIS H H N N 159 HIS H2 H N N 160 HIS HA H N N 161 HIS HB2 H N N 162 HIS HB3 H N N 163 HIS HD1 H N N 164 HIS HD2 H N N 165 HIS HE1 H N N 166 HIS HE2 H N N 167 HIS HXT H N N 168 HOH O O N N 169 HOH H1 H N N 170 HOH H2 H N N 171 ILE N N N N 172 ILE CA C N S 173 ILE C C N N 174 ILE O O N N 175 ILE CB C N S 176 ILE CG1 C N N 177 ILE CG2 C N N 178 ILE CD1 C N N 179 ILE OXT O N N 180 ILE H H N N 181 ILE H2 H N N 182 ILE HA H N N 183 ILE HB H N N 184 ILE HG12 H N N 185 ILE HG13 H N N 186 ILE HG21 H N N 187 ILE HG22 H N N 188 ILE HG23 H N N 189 ILE HD11 H N N 190 ILE HD12 H N N 191 ILE HD13 H N N 192 ILE HXT H N N 193 LEU N N N N 194 LEU CA C N S 195 LEU C C N N 196 LEU O O N N 197 LEU CB C N N 198 LEU CG C N N 199 LEU CD1 C N N 200 LEU CD2 C N N 201 LEU OXT O N N 202 LEU H H N N 203 LEU H2 H N N 204 LEU HA H N N 205 LEU HB2 H N N 206 LEU HB3 H N N 207 LEU HG H N N 208 LEU HD11 H N N 209 LEU HD12 H N N 210 LEU HD13 H N N 211 LEU HD21 H N N 212 LEU HD22 H N N 213 LEU HD23 H N N 214 LEU HXT H N N 215 LYS N N N N 216 LYS CA C N S 217 LYS C C N N 218 LYS O O N N 219 LYS CB C N N 220 LYS CG C N N 221 LYS CD C N N 222 LYS CE C N N 223 LYS NZ N N N 224 LYS OXT O N N 225 LYS H H N N 226 LYS H2 H N N 227 LYS HA H N N 228 LYS HB2 H N N 229 LYS HB3 H N N 230 LYS HG2 H N N 231 LYS HG3 H N N 232 LYS HD2 H N N 233 LYS HD3 H N N 234 LYS HE2 H N N 235 LYS HE3 H N N 236 LYS HZ1 H N N 237 LYS HZ2 H N N 238 LYS HZ3 H N N 239 LYS HXT H N N 240 MET N N N N 241 MET CA C N S 242 MET C C N N 243 MET O O N N 244 MET CB C N N 245 MET CG C N N 246 MET SD S N N 247 MET CE C N N 248 MET OXT O N N 249 MET H H N N 250 MET H2 H N N 251 MET HA H N N 252 MET HB2 H N N 253 MET HB3 H N N 254 MET HG2 H N N 255 MET HG3 H N N 256 MET HE1 H N N 257 MET HE2 H N N 258 MET HE3 H N N 259 MET HXT H N N 260 PGE C1 C N N 261 PGE O1 O N N 262 PGE C2 C N N 263 PGE O2 O N N 264 PGE C3 C N N 265 PGE C4 C N N 266 PGE O4 O N N 267 PGE C6 C N N 268 PGE C5 C N N 269 PGE O3 O N N 270 PGE H1 H N N 271 PGE H12 H N N 272 PGE HO1 H N N 273 PGE H2 H N N 274 PGE H22 H N N 275 PGE H3 H N N 276 PGE H32 H N N 277 PGE H4 H N N 278 PGE H42 H N N 279 PGE HO4 H N N 280 PGE H6 H N N 281 PGE H62 H N N 282 PGE H5 H N N 283 PGE H52 H N N 284 PHE N N N N 285 PHE CA C N S 286 PHE C C N N 287 PHE O O N N 288 PHE CB C N N 289 PHE CG C Y N 290 PHE CD1 C Y N 291 PHE CD2 C Y N 292 PHE CE1 C Y N 293 PHE CE2 C Y N 294 PHE CZ C Y N 295 PHE OXT O N N 296 PHE H H N N 297 PHE H2 H N N 298 PHE HA H N N 299 PHE HB2 H N N 300 PHE HB3 H N N 301 PHE HD1 H N N 302 PHE HD2 H N N 303 PHE HE1 H N N 304 PHE HE2 H N N 305 PHE HZ H N N 306 PHE HXT H N N 307 PRO N N N N 308 PRO CA C N S 309 PRO C C N N 310 PRO O O N N 311 PRO CB C N N 312 PRO CG C N N 313 PRO CD C N N 314 PRO OXT O N N 315 PRO H H N N 316 PRO HA H N N 317 PRO HB2 H N N 318 PRO HB3 H N N 319 PRO HG2 H N N 320 PRO HG3 H N N 321 PRO HD2 H N N 322 PRO HD3 H N N 323 PRO HXT H N N 324 SAV N1 N N N 325 SAV N3 N N N 326 SAV C4 C Y N 327 SAV C5 C Y N 328 SAV C6 C Y N 329 SAV C7 C Y N 330 SAV C8 C Y N 331 SAV C10 C Y N 332 SAV C13 C Y N 333 SAV C15 C Y N 334 SAV C17 C Y N 335 SAV C20 C Y N 336 SAV C21 C N N 337 SAV C1 C N N 338 SAV O1 O N N 339 SAV C2 C Y N 340 SAV C3 C Y N 341 SAV N2 N Y N 342 SAV C9 C Y N 343 SAV C11 C Y N 344 SAV C12 C Y N 345 SAV C14 C N N 346 SAV N4 N Y N 347 SAV N5 N Y N 348 SAV C16 C Y N 349 SAV N6 N Y N 350 SAV C18 C Y N 351 SAV O2 O N N 352 SAV C19 C N N 353 SAV O3 O N N 354 SAV HN1 H N N 355 SAV HN3 H N N 356 SAV H6 H N N 357 SAV H7 H N N 358 SAV H10 H N N 359 SAV H17 H N N 360 SAV H21 H N N 361 SAV H21A H N N 362 SAV H21B H N N 363 SAV H1 H N N 364 SAV H1A H N N 365 SAV H1B H N N 366 SAV H3 H N N 367 SAV H11 H N N 368 SAV H14 H N N 369 SAV H14A H N N 370 SAV H14B H N N 371 SAV HN5 H N N 372 SAV H16 H N N 373 SAV H19 H N N 374 SAV H19A H N N 375 SAV H19B H N N 376 SER N N N N 377 SER CA C N S 378 SER C C N N 379 SER O O N N 380 SER CB C N N 381 SER OG O N N 382 SER OXT O N N 383 SER H H N N 384 SER H2 H N N 385 SER HA H N N 386 SER HB2 H N N 387 SER HB3 H N N 388 SER HG H N N 389 SER HXT H N N 390 THR N N N N 391 THR CA C N S 392 THR C C N N 393 THR O O N N 394 THR CB C N R 395 THR OG1 O N N 396 THR CG2 C N N 397 THR OXT O N N 398 THR H H N N 399 THR H2 H N N 400 THR HA H N N 401 THR HB H N N 402 THR HG1 H N N 403 THR HG21 H N N 404 THR HG22 H N N 405 THR HG23 H N N 406 THR HXT H N N 407 TRP N N N N 408 TRP CA C N S 409 TRP C C N N 410 TRP O O N N 411 TRP CB C N N 412 TRP CG C Y N 413 TRP CD1 C Y N 414 TRP CD2 C Y N 415 TRP NE1 N Y N 416 TRP CE2 C Y N 417 TRP CE3 C Y N 418 TRP CZ2 C Y N 419 TRP CZ3 C Y N 420 TRP CH2 C Y N 421 TRP OXT O N N 422 TRP H H N N 423 TRP H2 H N N 424 TRP HA H N N 425 TRP HB2 H N N 426 TRP HB3 H N N 427 TRP HD1 H N N 428 TRP HE1 H N N 429 TRP HE3 H N N 430 TRP HZ2 H N N 431 TRP HZ3 H N N 432 TRP HH2 H N N 433 TRP HXT H N N 434 TYR N N N N 435 TYR CA C N S 436 TYR C C N N 437 TYR O O N N 438 TYR CB C N N 439 TYR CG C Y N 440 TYR CD1 C Y N 441 TYR CD2 C Y N 442 TYR CE1 C Y N 443 TYR CE2 C Y N 444 TYR CZ C Y N 445 TYR OH O N N 446 TYR OXT O N N 447 TYR H H N N 448 TYR H2 H N N 449 TYR HA H N N 450 TYR HB2 H N N 451 TYR HB3 H N N 452 TYR HD1 H N N 453 TYR HD2 H N N 454 TYR HE1 H N N 455 TYR HE2 H N N 456 TYR HH H N N 457 TYR HXT H N N 458 VAL N N N N 459 VAL CA C N S 460 VAL C C N N 461 VAL O O N N 462 VAL CB C N N 463 VAL CG1 C N N 464 VAL CG2 C N N 465 VAL OXT O N N 466 VAL H H N N 467 VAL H2 H N N 468 VAL HA H N N 469 VAL HB H N N 470 VAL HG11 H N N 471 VAL HG12 H N N 472 VAL HG13 H N N 473 VAL HG21 H N N 474 VAL HG22 H N N 475 VAL HG23 H N N 476 VAL HXT H N N 477 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PGE C1 O1 sing N N 246 PGE C1 C2 sing N N 247 PGE C1 H1 sing N N 248 PGE C1 H12 sing N N 249 PGE O1 HO1 sing N N 250 PGE C2 O2 sing N N 251 PGE C2 H2 sing N N 252 PGE C2 H22 sing N N 253 PGE O2 C3 sing N N 254 PGE C3 C4 sing N N 255 PGE C3 H3 sing N N 256 PGE C3 H32 sing N N 257 PGE C4 O3 sing N N 258 PGE C4 H4 sing N N 259 PGE C4 H42 sing N N 260 PGE O4 C6 sing N N 261 PGE O4 HO4 sing N N 262 PGE C6 C5 sing N N 263 PGE C6 H6 sing N N 264 PGE C6 H62 sing N N 265 PGE C5 O3 sing N N 266 PGE C5 H5 sing N N 267 PGE C5 H52 sing N N 268 PHE N CA sing N N 269 PHE N H sing N N 270 PHE N H2 sing N N 271 PHE CA C sing N N 272 PHE CA CB sing N N 273 PHE CA HA sing N N 274 PHE C O doub N N 275 PHE C OXT sing N N 276 PHE CB CG sing N N 277 PHE CB HB2 sing N N 278 PHE CB HB3 sing N N 279 PHE CG CD1 doub Y N 280 PHE CG CD2 sing Y N 281 PHE CD1 CE1 sing Y N 282 PHE CD1 HD1 sing N N 283 PHE CD2 CE2 doub Y N 284 PHE CD2 HD2 sing N N 285 PHE CE1 CZ doub Y N 286 PHE CE1 HE1 sing N N 287 PHE CE2 CZ sing Y N 288 PHE CE2 HE2 sing N N 289 PHE CZ HZ sing N N 290 PHE OXT HXT sing N N 291 PRO N CA sing N N 292 PRO N CD sing N N 293 PRO N H sing N N 294 PRO CA C sing N N 295 PRO CA CB sing N N 296 PRO CA HA sing N N 297 PRO C O doub N N 298 PRO C OXT sing N N 299 PRO CB CG sing N N 300 PRO CB HB2 sing N N 301 PRO CB HB3 sing N N 302 PRO CG CD sing N N 303 PRO CG HG2 sing N N 304 PRO CG HG3 sing N N 305 PRO CD HD2 sing N N 306 PRO CD HD3 sing N N 307 PRO OXT HXT sing N N 308 SAV N1 C4 sing N N 309 SAV N1 C5 sing N N 310 SAV N3 C8 sing N N 311 SAV N3 C9 sing N N 312 SAV C4 C17 doub Y N 313 SAV C4 C3 sing Y N 314 SAV C5 N2 doub Y N 315 SAV C5 N6 sing Y N 316 SAV C6 C7 doub Y N 317 SAV C6 N2 sing Y N 318 SAV C7 C8 sing Y N 319 SAV C8 N6 doub Y N 320 SAV C10 C9 doub Y N 321 SAV C10 C11 sing Y N 322 SAV C13 C12 sing Y N 323 SAV C13 C14 sing N N 324 SAV C13 N4 doub Y N 325 SAV C15 C12 sing Y N 326 SAV C15 N5 sing Y N 327 SAV C15 C16 doub Y N 328 SAV C17 C18 sing Y N 329 SAV C20 C2 sing Y N 330 SAV C20 C18 doub Y N 331 SAV C20 O3 sing N N 332 SAV C21 O3 sing N N 333 SAV C1 O1 sing N N 334 SAV O1 C2 sing N N 335 SAV C2 C3 doub Y N 336 SAV C9 C16 sing Y N 337 SAV C11 C12 doub Y N 338 SAV N4 N5 sing Y N 339 SAV C18 O2 sing N N 340 SAV O2 C19 sing N N 341 SAV N1 HN1 sing N N 342 SAV N3 HN3 sing N N 343 SAV C6 H6 sing N N 344 SAV C7 H7 sing N N 345 SAV C10 H10 sing N N 346 SAV C17 H17 sing N N 347 SAV C21 H21 sing N N 348 SAV C21 H21A sing N N 349 SAV C21 H21B sing N N 350 SAV C1 H1 sing N N 351 SAV C1 H1A sing N N 352 SAV C1 H1B sing N N 353 SAV C3 H3 sing N N 354 SAV C11 H11 sing N N 355 SAV C14 H14 sing N N 356 SAV C14 H14A sing N N 357 SAV C14 H14B sing N N 358 SAV N5 HN5 sing N N 359 SAV C16 H16 sing N N 360 SAV C19 H19 sing N N 361 SAV C19 H19A sing N N 362 SAV C19 H19B sing N N 363 SER N CA sing N N 364 SER N H sing N N 365 SER N H2 sing N N 366 SER CA C sing N N 367 SER CA CB sing N N 368 SER CA HA sing N N 369 SER C O doub N N 370 SER C OXT sing N N 371 SER CB OG sing N N 372 SER CB HB2 sing N N 373 SER CB HB3 sing N N 374 SER OG HG sing N N 375 SER OXT HXT sing N N 376 THR N CA sing N N 377 THR N H sing N N 378 THR N H2 sing N N 379 THR CA C sing N N 380 THR CA CB sing N N 381 THR CA HA sing N N 382 THR C O doub N N 383 THR C OXT sing N N 384 THR CB OG1 sing N N 385 THR CB CG2 sing N N 386 THR CB HB sing N N 387 THR OG1 HG1 sing N N 388 THR CG2 HG21 sing N N 389 THR CG2 HG22 sing N N 390 THR CG2 HG23 sing N N 391 THR OXT HXT sing N N 392 TRP N CA sing N N 393 TRP N H sing N N 394 TRP N H2 sing N N 395 TRP CA C sing N N 396 TRP CA CB sing N N 397 TRP CA HA sing N N 398 TRP C O doub N N 399 TRP C OXT sing N N 400 TRP CB CG sing N N 401 TRP CB HB2 sing N N 402 TRP CB HB3 sing N N 403 TRP CG CD1 doub Y N 404 TRP CG CD2 sing Y N 405 TRP CD1 NE1 sing Y N 406 TRP CD1 HD1 sing N N 407 TRP CD2 CE2 doub Y N 408 TRP CD2 CE3 sing Y N 409 TRP NE1 CE2 sing Y N 410 TRP NE1 HE1 sing N N 411 TRP CE2 CZ2 sing Y N 412 TRP CE3 CZ3 doub Y N 413 TRP CE3 HE3 sing N N 414 TRP CZ2 CH2 doub Y N 415 TRP CZ2 HZ2 sing N N 416 TRP CZ3 CH2 sing Y N 417 TRP CZ3 HZ3 sing N N 418 TRP CH2 HH2 sing N N 419 TRP OXT HXT sing N N 420 TYR N CA sing N N 421 TYR N H sing N N 422 TYR N H2 sing N N 423 TYR CA C sing N N 424 TYR CA CB sing N N 425 TYR CA HA sing N N 426 TYR C O doub N N 427 TYR C OXT sing N N 428 TYR CB CG sing N N 429 TYR CB HB2 sing N N 430 TYR CB HB3 sing N N 431 TYR CG CD1 doub Y N 432 TYR CG CD2 sing Y N 433 TYR CD1 CE1 sing Y N 434 TYR CD1 HD1 sing N N 435 TYR CD2 CE2 doub Y N 436 TYR CD2 HD2 sing N N 437 TYR CE1 CZ doub Y N 438 TYR CE1 HE1 sing N N 439 TYR CE2 CZ sing Y N 440 TYR CE2 HE2 sing N N 441 TYR CZ OH sing N N 442 TYR OH HH sing N N 443 TYR OXT HXT sing N N 444 VAL N CA sing N N 445 VAL N H sing N N 446 VAL N H2 sing N N 447 VAL CA C sing N N 448 VAL CA CB sing N N 449 VAL CA HA sing N N 450 VAL C O doub N N 451 VAL C OXT sing N N 452 VAL CB CG1 sing N N 453 VAL CB CG2 sing N N 454 VAL CB HB sing N N 455 VAL CG1 HG11 sing N N 456 VAL CG1 HG12 sing N N 457 VAL CG1 HG13 sing N N 458 VAL CG2 HG21 sing N N 459 VAL CG2 HG22 sing N N 460 VAL CG2 HG23 sing N N 461 VAL OXT HXT sing N N 462 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N~4~-(3-methyl-1H-indazol-6-yl)-N~2~-(3,4,5-trimethoxyphenyl)pyrimidine-2,4-diamine' SAV 3 1,2-ETHANEDIOL EDO 4 'TRIETHYLENE GLYCOL' PGE 5 'CHLORIDE ION' CL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OSS _pdbx_initial_refinement_model.details 'PDB entry 2OSS' #