HEADER IMMUNE SYSTEM 09-JAN-14 4OCS TITLE CRYSTAL STRUCTURE OF HUMAN FAB CAP256-VRC26.10, A POTENT V1V2-DIRECTED TITLE 2 HIV-1 NEUTRALIZING ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAP256-VRC26.10 LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: FAB; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAP256-VRC26.10 HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 FRAGMENT: FAB; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PVRC8400 KEYWDS FAB, HIV-1, V1V2, CAP256, VRC26, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.GORMAN,N.A.DORIA-ROSE,C.A.SCHRAMM,P.L.MOORE,J.R.MASCOLA,L.SHAPIRO, AUTHOR 2 L.MORRIS,P.D.KWONG REVDAT 6 30-OCT-24 4OCS 1 REMARK REVDAT 5 06-DEC-23 4OCS 1 REMARK REVDAT 4 20-SEP-23 4OCS 1 REMARK REVDAT 3 14-MAY-14 4OCS 1 JRNL REVDAT 2 02-APR-14 4OCS 1 JRNL REVDAT 1 26-FEB-14 4OCS 0 JRNL AUTH N.A.DORIA-ROSE,C.A.SCHRAMM,J.GORMAN,P.L.MOORE,J.N.BHIMAN, JRNL AUTH 2 B.J.DEKOSKY,M.J.ERNANDES,I.S.GEORGIEV,H.J.KIM,M.PANCERA, JRNL AUTH 3 R.P.STAUPE,H.R.ALTAE-TRAN,R.T.BAILER,E.T.CROOKS,A.CUPO, JRNL AUTH 4 A.DRUZ,N.J.GARRETT,K.H.HOI,R.KONG,M.K.LOUDER,N.S.LONGO, JRNL AUTH 5 K.MCKEE,M.NONYANE,S.O'DELL,R.S.ROARK,R.S.RUDICELL, JRNL AUTH 6 S.D.SCHMIDT,D.J.SHEWARD,C.SOTO,C.K.WIBMER,Y.YANG,Z.ZHANG, JRNL AUTH 7 NISC COMPARATIVE SEQUENCING,J.C.MULLIKIN,J.M.BINLEY, JRNL AUTH 8 R.W.SANDERS,I.A.WILSON,J.P.MOORE,A.B.WARD,G.GEORGIOU, JRNL AUTH 9 C.WILLIAMSON,S.S.ABDOOL KARIM,L.MORRIS,P.D.KWONG,L.SHAPIRO, JRNL AUTH10 J.R.MASCOLA JRNL TITL DEVELOPMENTAL PATHWAY FOR POTENT V1V2-DIRECTED JRNL TITL 2 HIV-NEUTRALIZING ANTIBODIES. JRNL REF NATURE V. 509 55 2014 JRNL REFN ISSN 0028-0836 JRNL PMID 24590074 JRNL DOI 10.1038/NATURE13036 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 65.1 REMARK 3 NUMBER OF REFLECTIONS : 24684 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1234 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.7763 - 3.9532 0.78 3309 174 0.1772 0.1976 REMARK 3 2 3.9532 - 3.1386 0.68 2783 151 0.1906 0.1839 REMARK 3 3 3.1386 - 2.7420 0.70 2791 148 0.2199 0.2860 REMARK 3 4 2.7420 - 2.4914 0.69 2774 131 0.2357 0.2907 REMARK 3 5 2.4914 - 2.3129 0.69 2707 143 0.2313 0.2267 REMARK 3 6 2.3129 - 2.1766 0.64 2500 144 0.2270 0.2999 REMARK 3 7 2.1766 - 2.0676 0.61 2424 117 0.2452 0.2917 REMARK 3 8 2.0676 - 1.9776 0.57 2234 125 0.2475 0.3290 REMARK 3 9 1.9776 - 1.9010 0.49 1928 101 0.2644 0.3245 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3408 REMARK 3 ANGLE : 0.957 4637 REMARK 3 CHIRALITY : 0.058 526 REMARK 3 PLANARITY : 0.004 592 REMARK 3 DIHEDRAL : 12.333 1212 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 3 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9964 -8.1970 -9.5222 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.4235 REMARK 3 T33: 0.1487 T12: 0.0354 REMARK 3 T13: -0.0151 T23: -0.0503 REMARK 3 L TENSOR REMARK 3 L11: 0.4360 L22: 0.8560 REMARK 3 L33: 0.4365 L12: 0.1328 REMARK 3 L13: 0.0026 L23: -0.1819 REMARK 3 S TENSOR REMARK 3 S11: -0.0763 S12: -0.5070 S13: 0.0220 REMARK 3 S21: -0.0554 S22: 0.1058 S23: -0.0393 REMARK 3 S31: -0.0028 S32: 0.0388 S33: -0.0018 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 108 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5044 -10.0318 -40.5306 REMARK 3 T TENSOR REMARK 3 T11: 0.1504 T22: 0.0724 REMARK 3 T33: 0.1385 T12: 0.0046 REMARK 3 T13: -0.0167 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.3117 L22: 0.4970 REMARK 3 L33: 0.3507 L12: -0.0403 REMARK 3 L13: -0.0831 L23: 0.2725 REMARK 3 S TENSOR REMARK 3 S11: -0.0520 S12: -0.0023 S13: -0.0024 REMARK 3 S21: -0.0096 S22: 0.0166 S23: 0.0045 REMARK 3 S31: -0.0250 S32: 0.1343 S33: 0.0623 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5126 1.7515 -18.0418 REMARK 3 T TENSOR REMARK 3 T11: 0.1163 T22: 0.2385 REMARK 3 T33: 0.1222 T12: -0.0169 REMARK 3 T13: -0.0006 T23: -0.0532 REMARK 3 L TENSOR REMARK 3 L11: 0.4115 L22: 0.4535 REMARK 3 L33: 0.2359 L12: -0.0452 REMARK 3 L13: -0.0496 L23: 0.0069 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: -0.2263 S13: 0.0565 REMARK 3 S21: 0.0149 S22: 0.0145 S23: 0.0065 REMARK 3 S31: -0.0275 S32: 0.0168 S33: -0.0359 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 110 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4571 -14.1204 -48.0637 REMARK 3 T TENSOR REMARK 3 T11: 0.1589 T22: 0.1131 REMARK 3 T33: 0.1846 T12: 0.0071 REMARK 3 T13: -0.0195 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.2254 L22: 0.2928 REMARK 3 L33: 0.3237 L12: 0.0839 REMARK 3 L13: -0.0565 L23: 0.1685 REMARK 3 S TENSOR REMARK 3 S11: 0.0698 S12: 0.0642 S13: -0.0482 REMARK 3 S21: -0.0485 S22: -0.0295 S23: -0.0078 REMARK 3 S31: 0.0439 S32: 0.0287 S33: -0.0124 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OCS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084329. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24746 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.901 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 65.2 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.46300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3U4E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG4000, 0.4 M SODIUM ACETATE, 0.1 REMARK 280 M TRIS, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.69450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.26300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.09400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 116.26300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.69450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.09400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN L 1 REMARK 465 SER L 2 REMARK 465 GLU L 210 REMARK 465 CYS L 211 REMARK 465 SER L 212 REMARK 465 SER H 100F REMARK 465 ASP H 100G REMARK 465 TYS H 100H REMARK 465 TYS H 100I REMARK 465 ASP H 100J REMARK 465 PHE H 100K REMARK 465 GLY H 100L REMARK 465 ARG H 100M REMARK 465 PRO H 100N REMARK 465 GLN H 100O REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 LYS H 218 REMARK 465 GLY H 219 REMARK 465 LEU H 220 REMARK 465 GLU H 221 REMARK 465 VAL H 222 REMARK 465 LEU H 223 REMARK 465 PHE H 224 REMARK 465 GLN H 225 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER L 26 -166.19 -73.66 REMARK 500 ASN L 27B -79.81 -72.56 REMARK 500 ASP L 30 22.13 -142.53 REMARK 500 ASN L 51 -51.16 73.16 REMARK 500 THR L 69 37.53 -143.81 REMARK 500 ASN L 95A -6.63 72.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OCR RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4OCW RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4OD1 RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4OD3 RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4ODH RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4ORG RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE DBREF 4OCS H 1 225 PDB 4OCS 4OCS 1 225 DBREF 4OCS L 1 212 PDB 4OCS 4OCS 1 212 SEQRES 1 L 217 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER ALA ALA SEQRES 2 L 217 PRO GLY GLN LYS VAL THR ILE SER CYS SER GLY SER SER SEQRES 3 L 217 SER ASN ILE GLY ASP ASN TYR VAL SER TRP TYR GLN HIS SEQRES 4 L 217 LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR GLU ASN SEQRES 5 L 217 THR ARG ARG PRO SER GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 217 SER LYS SER GLY THR SER ALA THR LEU ALA ILE THR GLY SEQRES 7 L 217 LEU GLN THR GLY ASP GLU ALA ASP TYR TYR CYS GLY THR SEQRES 8 L 217 TRP ASP VAL ARG PRO ASN ARG GLY ALA VAL PHE GLY THR SEQRES 9 L 217 GLY THR LYS VAL THR VAL LEU GLY GLN PRO LYS ALA ASN SEQRES 10 L 217 PRO THR VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU SEQRES 11 L 217 GLN ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP SEQRES 12 L 217 PHE TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SEQRES 13 L 217 SER SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SEQRES 14 L 217 SER LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR SEQRES 15 L 217 LEU SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER SEQRES 16 L 217 TYR SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU SEQRES 17 L 217 LYS THR VAL ALA PRO THR GLU CYS SER SEQRES 1 H 256 GLN ALA ILE LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 256 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLN SEQRES 3 H 256 PHE THR PHE SER GLY HIS GLY LEU HIS TRP VAL ARG GLN SEQRES 4 H 256 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SER ILE SER SEQRES 5 H 256 PHE ALA GLY THR LYS MET ASP TYR ALA ASP SER VAL LYS SEQRES 6 H 256 GLY ARG PHE ALA ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 256 LEU TYR LEU GLN MET ASN SER LEU ARG VAL GLU ASP THR SEQRES 8 H 256 ALA LEU TYR TYR CYS ALA LYS ASP MET ARG GLU TYR GLU SEQRES 9 H 256 CYS GLU TYR TRP THR SER ASP TYS TYS ASP PHE GLY ARG SEQRES 10 H 256 PRO GLN PRO CYS ILE ASP ARG ARG GLY VAL VAL GLY ILE SEQRES 11 H 256 PHE ASP MET TRP GLY GLN GLY THR MET VAL THR VAL SER SEQRES 12 H 256 THR ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 13 H 256 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 14 H 256 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 15 H 256 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 16 H 256 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 17 H 256 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 18 H 256 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 19 H 256 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 20 H 256 ASP LYS GLY LEU GLU VAL LEU PHE GLN FORMUL 3 HOH *256(H2 O) HELIX 1 1 GLN L 79 GLU L 83 5 5 HELIX 2 2 SER L 121 ALA L 127 1 7 HELIX 3 3 THR L 181 SER L 187 1 7 HELIX 4 4 THR H 28 SER H 30 5 3 HELIX 5 5 ASN H 73 LYS H 75 5 3 HELIX 6 6 ARG H 83 THR H 87 5 5 HELIX 7 7 SER H 156 ALA H 158 5 3 HELIX 8 8 SER H 187 LEU H 189 5 3 HELIX 9 9 LYS H 201 ASN H 204 5 4 SHEET 1 A 5 SER L 9 ALA L 13 0 SHEET 2 A 5 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 A 5 ASP L 85 TRP L 91 -1 N TYR L 86 O THR L 102 SHEET 4 A 5 SER L 34 HIS L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 A 5 LYS L 45 ILE L 48 -1 O LEU L 47 N TRP L 35 SHEET 1 B 4 SER L 9 ALA L 13 0 SHEET 2 B 4 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 B 4 ASP L 85 TRP L 91 -1 N TYR L 86 O THR L 102 SHEET 4 B 4 ALA L 96 PHE L 98 -1 O VAL L 97 N THR L 90 SHEET 1 C 3 VAL L 19 SER L 24 0 SHEET 2 C 3 SER L 70 ILE L 75 -1 O ALA L 71 N CYS L 23 SHEET 3 C 3 PHE L 62 LYS L 66 -1 N SER L 65 O THR L 72 SHEET 1 D 4 THR L 114 PHE L 118 0 SHEET 2 D 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 D 4 TYR L 172 LEU L 180 -1 O SER L 176 N CYS L 134 SHEET 4 D 4 VAL L 159 THR L 161 -1 N GLU L 160 O TYR L 177 SHEET 1 E 4 THR L 114 PHE L 118 0 SHEET 2 E 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 E 4 TYR L 172 LEU L 180 -1 O SER L 176 N CYS L 134 SHEET 4 E 4 SER L 165 LYS L 166 -1 N SER L 165 O ALA L 173 SHEET 1 F 4 SER L 153 VAL L 155 0 SHEET 2 F 4 THR L 145 ALA L 150 -1 N TRP L 148 O VAL L 155 SHEET 3 F 4 TYR L 191 HIS L 197 -1 O THR L 196 N THR L 145 SHEET 4 F 4 SER L 200 VAL L 206 -1 O SER L 200 N HIS L 197 SHEET 1 G 4 ILE H 3 SER H 7 0 SHEET 2 G 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 G 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 G 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 H 6 VAL H 11 VAL H 12 0 SHEET 2 H 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 H 6 ALA H 88 GLU H 98 -1 N TYR H 90 O THR H 107 SHEET 4 H 6 HIS H 32 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 H 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 H 6 MET H 57 TYR H 59 -1 O ASP H 58 N SER H 50 SHEET 1 I 4 VAL H 11 VAL H 12 0 SHEET 2 I 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 I 4 ALA H 88 GLU H 98 -1 N TYR H 90 O THR H 107 SHEET 4 I 4 PHE H 101 TRP H 103 -1 O MET H 102 N LYS H 94 SHEET 1 J 4 SER H 120 LEU H 124 0 SHEET 2 J 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 J 4 TYR H 176 PRO H 185 -1 O VAL H 182 N LEU H 138 SHEET 4 J 4 HIS H 164 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 K 4 SER H 120 LEU H 124 0 SHEET 2 K 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 K 4 TYR H 176 PRO H 185 -1 O VAL H 182 N LEU H 138 SHEET 4 K 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 L 3 THR H 151 TRP H 154 0 SHEET 2 L 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 L 3 THR H 205 ARG H 210 -1 O VAL H 207 N VAL H 198 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 2 CYS L 134 CYS L 193 1555 1555 2.03 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 4 CYS H 100A CYS H 100Q 1555 1555 2.03 SSBOND 5 CYS H 140 CYS H 196 1555 1555 2.03 CISPEP 1 SER L 56 GLY L 57 0 11.25 CISPEP 2 ARG L 94 PRO L 95 0 -9.79 CISPEP 3 THR L 100 GLY L 101 0 -10.62 CISPEP 4 TYR L 140 PRO L 141 0 0.40 CISPEP 5 PHE H 146 PRO H 147 0 -5.19 CISPEP 6 GLU H 148 PRO H 149 0 -4.44 CRYST1 43.389 46.188 232.526 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023047 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021651 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004301 0.00000