HEADER IMMUNE SYSTEM 09-JAN-14 4OCW TITLE CRYSTAL STRUCTURE OF HUMAN FAB CAP256-VRC26.06, A POTENT V1V2-DIRECTED TITLE 2 HIV-1 NEUTRALIZING ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAP256-VRC26.06 LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: FAB; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAP256-VRC26.06 HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 FRAGMENT: FAB; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PVRC8400 KEYWDS FAB, HIV-1, V1V2, CAP256, VRC26, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.GORMAN,N.A.DORIA-ROSE,C.A.SCHRAMM,P.L.MOORE,J.R.MASCOLA,L.SHAPIRO, AUTHOR 2 L.MORRIS,P.D.KWONG REVDAT 6 09-OCT-24 4OCW 1 REMARK REVDAT 5 06-DEC-23 4OCW 1 REMARK REVDAT 4 20-SEP-23 4OCW 1 LINK REVDAT 3 14-MAY-14 4OCW 1 JRNL REVDAT 2 02-APR-14 4OCW 1 JRNL REVDAT 1 26-FEB-14 4OCW 0 JRNL AUTH N.A.DORIA-ROSE,C.A.SCHRAMM,J.GORMAN,P.L.MOORE,J.N.BHIMAN, JRNL AUTH 2 B.J.DEKOSKY,M.J.ERNANDES,I.S.GEORGIEV,H.J.KIM,M.PANCERA, JRNL AUTH 3 R.P.STAUPE,H.R.ALTAE-TRAN,R.T.BAILER,E.T.CROOKS,A.CUPO, JRNL AUTH 4 A.DRUZ,N.J.GARRETT,K.H.HOI,R.KONG,M.K.LOUDER,N.S.LONGO, JRNL AUTH 5 K.MCKEE,M.NONYANE,S.O'DELL,R.S.ROARK,R.S.RUDICELL, JRNL AUTH 6 S.D.SCHMIDT,D.J.SHEWARD,C.SOTO,C.K.WIBMER,Y.YANG,Z.ZHANG, JRNL AUTH 7 NISC COMPARATIVE SEQUENCING,J.C.MULLIKIN,J.M.BINLEY, JRNL AUTH 8 R.W.SANDERS,I.A.WILSON,J.P.MOORE,A.B.WARD,G.GEORGIOU, JRNL AUTH 9 C.WILLIAMSON,S.S.ABDOOL KARIM,L.MORRIS,P.D.KWONG,L.SHAPIRO, JRNL AUTH10 J.R.MASCOLA JRNL TITL DEVELOPMENTAL PATHWAY FOR POTENT V1V2-DIRECTED JRNL TITL 2 HIV-NEUTRALIZING ANTIBODIES. JRNL REF NATURE V. 509 55 2014 JRNL REFN ISSN 0028-0836 JRNL PMID 24590074 JRNL DOI 10.1038/NATURE13036 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 16148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.8980 - 5.4490 1.00 2791 147 0.1868 0.2477 REMARK 3 2 5.4490 - 4.3266 1.00 2727 144 0.1516 0.1795 REMARK 3 3 4.3266 - 3.7801 1.00 2730 142 0.1716 0.2219 REMARK 3 4 3.7801 - 3.4347 1.00 2713 143 0.2157 0.2499 REMARK 3 5 3.4347 - 3.1886 1.00 2700 143 0.2410 0.2554 REMARK 3 6 3.1886 - 3.0010 0.92 2487 130 0.2994 0.3332 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3564 REMARK 3 ANGLE : 0.793 4849 REMARK 3 CHIRALITY : 0.030 546 REMARK 3 PLANARITY : 0.004 621 REMARK 3 DIHEDRAL : 13.343 1267 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 262.4757 43.9609 22.5506 REMARK 3 T TENSOR REMARK 3 T11: 0.7732 T22: 0.4384 REMARK 3 T33: 0.5440 T12: -0.1145 REMARK 3 T13: -0.0347 T23: -0.0404 REMARK 3 L TENSOR REMARK 3 L11: 0.4304 L22: 0.1916 REMARK 3 L33: -0.0851 L12: 0.3397 REMARK 3 L13: 0.0828 L23: -0.0130 REMARK 3 S TENSOR REMARK 3 S11: 0.1901 S12: 0.0569 S13: -0.0197 REMARK 3 S21: 0.5366 S22: -0.2481 S23: 0.1754 REMARK 3 S31: -0.0638 S32: -0.0458 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 112 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 264.9166 71.0324 10.6909 REMARK 3 T TENSOR REMARK 3 T11: 0.6448 T22: 0.4365 REMARK 3 T33: 0.4525 T12: 0.0425 REMARK 3 T13: 0.0005 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.1940 L22: 0.5939 REMARK 3 L33: 0.5317 L12: 0.6221 REMARK 3 L13: 0.0176 L23: -0.1464 REMARK 3 S TENSOR REMARK 3 S11: 0.2393 S12: -0.0326 S13: 0.0096 REMARK 3 S21: 0.0193 S22: 0.0612 S23: 0.1813 REMARK 3 S31: -0.0335 S32: 0.0259 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 257.3114 33.6336 1.9811 REMARK 3 T TENSOR REMARK 3 T11: 0.4831 T22: 0.3756 REMARK 3 T33: 0.6015 T12: -0.0989 REMARK 3 T13: -0.0972 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 1.0047 L22: 0.5373 REMARK 3 L33: 1.1191 L12: -0.1275 REMARK 3 L13: -0.9331 L23: 0.0559 REMARK 3 S TENSOR REMARK 3 S11: -0.0883 S12: -0.0131 S13: -0.1849 REMARK 3 S21: -0.0284 S22: 0.0449 S23: 0.2131 REMARK 3 S31: -0.0700 S32: -0.1118 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 112 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 275.9808 72.0308 0.2157 REMARK 3 T TENSOR REMARK 3 T11: 0.6657 T22: 0.5599 REMARK 3 T33: 0.4589 T12: 0.0412 REMARK 3 T13: 0.0034 T23: -0.0767 REMARK 3 L TENSOR REMARK 3 L11: 0.0987 L22: 0.5543 REMARK 3 L33: 0.2194 L12: 0.0650 REMARK 3 L13: 0.5414 L23: -0.2013 REMARK 3 S TENSOR REMARK 3 S11: 0.0133 S12: 0.1027 S13: 0.1405 REMARK 3 S21: 0.0953 S22: 0.0814 S23: 0.1143 REMARK 3 S31: 0.1765 S32: 0.1946 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084333. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17032 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.13300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3U4E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3 M SODIUM FORMATE, 0.1 M TRIS, PH REMARK 280 7.5, CRYOPROTECTANT: 20% XYLITOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 126.75700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 73.18319 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 23.35000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 126.75700 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 73.18319 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 23.35000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 126.75700 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 73.18319 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 23.35000 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 126.75700 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 73.18319 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 23.35000 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 126.75700 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 73.18319 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 23.35000 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 126.75700 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 73.18319 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 23.35000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 146.36638 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 46.70000 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 146.36638 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 46.70000 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 146.36638 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 46.70000 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 146.36638 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 46.70000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 146.36638 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 46.70000 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 146.36638 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 46.70000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU L 210 REMARK 465 CYS L 211 REMARK 465 SER L 212 REMARK 465 PHE H 100L REMARK 465 GLY H 100M REMARK 465 SER H 100N REMARK 465 GLN H 225 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR H 100J CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP H 100K CG OD1 OD2 REMARK 470 ARG H 100O CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS L 27B -72.16 -132.89 REMARK 500 ASN L 51 -41.04 67.81 REMARK 500 ASP L 52 32.50 -153.46 REMARK 500 SER L 56 87.87 -44.27 REMARK 500 ALA L 84 -177.65 -174.01 REMARK 500 VAL H 48 -61.89 -99.13 REMARK 500 GLU H 100C 103.03 -174.75 REMARK 500 TYS H 100I 20.67 -76.51 REMARK 500 SER H 132 110.71 -167.82 REMARK 500 ASP H 144 74.75 56.68 REMARK 500 PHE H 146 140.19 -172.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OCR RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4OCS RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4OD1 RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4OD3 RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4ODH RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE REMARK 900 RELATED ID: 4ORG RELATED DB: PDB REMARK 900 ANTIBODY FROM THE SAME LINEAGE DBREF 4OCW H 1 225 PDB 4OCW 4OCW 1 225 DBREF 4OCW L 1 212 PDB 4OCW 4OCW 1 212 SEQRES 1 L 214 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER ALA ALA SEQRES 2 L 214 PRO GLY GLN LYS VAL THR ILE SER CYS SER GLY SER THR SEQRES 3 L 214 SER LYS ILE GLY GLN ASN SER VAL SER TRP TYR GLN GLN SEQRES 4 L 214 LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR GLU ASN SEQRES 5 L 214 ASP ARG ARG PRO SER GLY THR PRO ASP ARG PHE SER GLY SEQRES 6 L 214 SER LYS SER GLY THR SER ALA THR LEU ALA ILE THR GLY SEQRES 7 L 214 LEU GLN THR GLY ASP GLU ALA GLU TYR TYR CYS GLU THR SEQRES 8 L 214 TRP ASP GLY SER GLY GLY VAL PHE GLY THR GLY THR LYS SEQRES 9 L 214 VAL THR VAL LEU GLY GLN PRO LYS ALA ASN PRO THR VAL SEQRES 10 L 214 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 L 214 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 L 214 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 L 214 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 L 214 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 L 214 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 L 214 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 L 214 ALA PRO THR GLU CYS SER SEQRES 1 H 257 GLU VAL GLN LEU ILE GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 257 PRO GLY ARG SER LEU ARG LEU SER CYS GLY ALA SER GLY SEQRES 3 H 257 PHE SER PHE ASN ASN TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 H 257 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA GLY ILE SER SEQRES 5 H 257 PHE ALA GLY ILE LYS LYS TYR TYR GLY THR SER VAL LYS SEQRES 6 H 257 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN ASN SEQRES 7 H 257 PHE TYR LEU GLN MET ASN SER LEU ARG VAL GLU ASP THR SEQRES 8 H 257 ALA LEU TYR TYR CYS ALA ARG ASP LEU ARG GLU LEU GLU SEQRES 9 H 257 CYS GLU GLU TRP THR LEU TYS ASN TYS TYR ASP PHE GLY SEQRES 10 H 257 SER ARG GLY PRO CYS VAL ASP PRO ARG GLY VAL ALA GLY SEQRES 11 H 257 SER PHE ASP VAL TRP GLY GLN GLY THR MET VAL THR VAL SEQRES 12 H 257 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 13 H 257 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 14 H 257 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 15 H 257 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 16 H 257 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 17 H 257 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 18 H 257 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 19 H 257 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 20 H 257 CYS ASP LYS GLY LEU GLU VAL LEU PHE GLN MODRES 4OCW TYS H 100G TYR O-SULFO-L-TYROSINE MODRES 4OCW TYS H 100I TYR O-SULFO-L-TYROSINE HET TYS H 100G 25 HET TYS H 100I 25 HETNAM TYS O-SULFO-L-TYROSINE FORMUL 2 TYS 2(C9 H11 N O6 S) HELIX 1 1 GLN L 79 GLU L 83 5 5 HELIX 2 2 SER L 121 ALA L 127 1 7 HELIX 3 3 THR L 181 SER L 187 1 7 HELIX 4 4 SER H 28 ASN H 30 5 3 HELIX 5 5 ARG H 83 THR H 87 5 5 HELIX 6 6 SER H 156 ALA H 158 5 3 HELIX 7 7 SER H 187 THR H 191 5 5 HELIX 8 8 LYS H 201 ASN H 204 5 4 SHEET 1 A 5 SER L 9 ALA L 13 0 SHEET 2 A 5 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 A 5 ALA L 84 THR L 90 -1 N TYR L 86 O THR L 102 SHEET 4 A 5 SER L 34 GLN L 38 -1 N SER L 34 O GLU L 89 SHEET 5 A 5 LEU L 46 ILE L 48 -1 O LEU L 47 N TRP L 35 SHEET 1 B 4 SER L 9 ALA L 13 0 SHEET 2 B 4 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 B 4 ALA L 84 THR L 90 -1 N TYR L 86 O THR L 102 SHEET 4 B 4 VAL L 97 PHE L 98 -1 O VAL L 97 N THR L 90 SHEET 1 C 3 VAL L 19 SER L 24 0 SHEET 2 C 3 SER L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 3 C 3 PHE L 62 SER L 67 -1 N SER L 63 O ALA L 74 SHEET 1 D 4 THR L 114 PHE L 118 0 SHEET 2 D 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 D 4 TYR L 172 LEU L 180 -1 O LEU L 178 N LEU L 132 SHEET 4 D 4 VAL L 159 THR L 161 -1 N GLU L 160 O TYR L 177 SHEET 1 E 4 THR L 114 PHE L 118 0 SHEET 2 E 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 E 4 TYR L 172 LEU L 180 -1 O LEU L 178 N LEU L 132 SHEET 4 E 4 SER L 165 LYS L 166 -1 N SER L 165 O ALA L 173 SHEET 1 F 4 SER L 153 VAL L 155 0 SHEET 2 F 4 THR L 145 ALA L 150 -1 N ALA L 150 O SER L 153 SHEET 3 F 4 TYR L 191 HIS L 197 -1 O GLN L 194 N ALA L 147 SHEET 4 F 4 SER L 200 VAL L 206 -1 O SER L 200 N HIS L 197 SHEET 1 G 4 GLN H 3 SER H 7 0 SHEET 2 G 4 LEU H 18 SER H 25 -1 O GLY H 23 N ILE H 5 SHEET 3 G 4 ASN H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 G 4 THR H 68 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 H 6 GLY H 10 VAL H 12 0 SHEET 2 H 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 H 6 ALA H 88 GLU H 98 -1 N TYR H 90 O THR H 107 SHEET 4 H 6 TYR H 32 ALA H 40 -1 N VAL H 37 O TYR H 91 SHEET 5 H 6 GLY H 44 ILE H 51 -1 O ALA H 49 N TRP H 36 SHEET 6 H 6 LYS H 57 TYR H 59 -1 O TYR H 58 N GLY H 50 SHEET 1 I 4 GLY H 10 VAL H 12 0 SHEET 2 I 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 I 4 ALA H 88 GLU H 98 -1 N TYR H 90 O THR H 107 SHEET 4 I 4 PHE H 101A TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 J 4 SER H 120 LEU H 124 0 SHEET 2 J 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 J 4 TYR H 176 PRO H 185 -1 O VAL H 184 N ALA H 136 SHEET 4 J 4 HIS H 164 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 K 4 SER H 120 LEU H 124 0 SHEET 2 K 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 K 4 TYR H 176 PRO H 185 -1 O VAL H 184 N ALA H 136 SHEET 4 K 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 L 3 THR H 151 TRP H 154 0 SHEET 2 L 3 TYR H 194 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 L 3 THR H 205 VAL H 211 -1 O THR H 205 N HIS H 200 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 2 CYS L 134 CYS L 193 1555 1555 2.03 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 4 CYS H 100A CYS H 100R 1555 1555 2.03 SSBOND 5 CYS H 140 CYS H 196 1555 1555 2.03 LINK C LEU H 100F N TYS H 100G 1555 1555 1.33 LINK C TYS H 100G N ASN H 100H 1555 1555 1.33 LINK C ASN H 100H N TYS H 100I 1555 1555 1.33 LINK C TYS H 100I N TYR H 100J 1555 1555 1.33 CISPEP 1 THR L 100 GLY L 101 0 -7.59 CISPEP 2 TYR L 140 PRO L 141 0 -0.32 CISPEP 3 PRO H 41 GLY H 42 0 -5.67 CISPEP 4 ARG H 100V GLY H 100W 0 3.77 CISPEP 5 PHE H 146 PRO H 147 0 -10.02 CISPEP 6 GLU H 148 PRO H 149 0 -2.36 CRYST1 253.514 253.514 70.050 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003945 0.002277 0.000000 0.00000 SCALE2 0.000000 0.004555 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014276 0.00000