HEADER TRANSPORT PROTEIN 13-JAN-14 4OES TITLE CRYSTAL STRUCTURE OF NIKA FROM BRUCELLA SUIS IN COMPLEX WITH FE(III)- TITLE 2 EDTA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NIKA PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA SUIS; SOURCE 3 ORGANISM_TAXID: 29461; SOURCE 4 GENE: NIKA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EXTRACYTOPLASMIC, NICKEL IMPORT, METAL TRANSPORT, ABC-TYPE IMPORTER, KEYWDS 2 EXTRACYTOPLASMIC NICKEL-BINDING PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LEBRETTE,C.CAVAZZA REVDAT 3 20-SEP-23 4OES 1 REMARK LINK REVDAT 2 19-NOV-14 4OES 1 JRNL REVDAT 1 01-OCT-14 4OES 0 JRNL AUTH H.LEBRETTE,C.BROCHIER-ARMANET,B.ZAMBELLI,H.DE REUSE, JRNL AUTH 2 E.BOREZEE-DURANT,S.CIURLI,C.CAVAZZA JRNL TITL PROMISCUOUS NICKEL IMPORT IN HUMAN PATHOGENS: STRUCTURE, JRNL TITL 2 THERMODYNAMICS, AND EVOLUTION OF EXTRACYTOPLASMIC JRNL TITL 3 NICKEL-BINDING PROTEINS. JRNL REF STRUCTURE V. 22 1421 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25199691 JRNL DOI 10.1016/J.STR.2014.07.012 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 43063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2153 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8587 - 4.8105 0.99 2832 149 0.1647 0.2017 REMARK 3 2 4.8105 - 3.8187 0.96 2683 141 0.1455 0.1650 REMARK 3 3 3.8187 - 3.3362 0.95 2664 140 0.1648 0.2180 REMARK 3 4 3.3362 - 3.0312 0.99 2767 146 0.1923 0.2385 REMARK 3 5 3.0312 - 2.8140 0.99 2747 144 0.2098 0.2750 REMARK 3 6 2.8140 - 2.6481 0.99 2765 146 0.2123 0.3083 REMARK 3 7 2.6481 - 2.5155 0.99 2757 145 0.2122 0.2944 REMARK 3 8 2.5155 - 2.4060 0.99 2749 145 0.2232 0.2745 REMARK 3 9 2.4060 - 2.3134 1.00 2738 144 0.2103 0.2487 REMARK 3 10 2.3134 - 2.2335 0.98 2729 143 0.2209 0.2726 REMARK 3 11 2.2335 - 2.1637 0.99 2778 147 0.2245 0.2887 REMARK 3 12 2.1637 - 2.1019 1.00 2759 145 0.2189 0.2592 REMARK 3 13 2.1019 - 2.0465 0.98 2698 142 0.2320 0.2623 REMARK 3 14 2.0465 - 1.9966 1.00 2769 146 0.2265 0.2808 REMARK 3 15 1.9966 - 1.9512 0.89 2475 130 0.2900 0.3607 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 4063 REMARK 3 ANGLE : 1.459 5526 REMARK 3 CHIRALITY : 0.091 601 REMARK 3 PLANARITY : 0.008 721 REMARK 3 DIHEDRAL : 13.569 1503 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2246 1.5343 18.6023 REMARK 3 T TENSOR REMARK 3 T11: 0.1601 T22: 0.1775 REMARK 3 T33: 0.2997 T12: 0.0066 REMARK 3 T13: -0.0654 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.8025 L22: 1.8845 REMARK 3 L33: 1.2708 L12: -0.0101 REMARK 3 L13: -0.1453 L23: 0.5943 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: 0.1809 S13: 0.0779 REMARK 3 S21: -0.2041 S22: -0.0729 S23: 0.4456 REMARK 3 S31: -0.1097 S32: -0.1554 S33: 0.0922 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 309 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4143 2.9346 21.1850 REMARK 3 T TENSOR REMARK 3 T11: 0.1423 T22: 0.2017 REMARK 3 T33: 0.2398 T12: -0.0040 REMARK 3 T13: 0.0178 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.3722 L22: 1.1985 REMARK 3 L33: 1.1990 L12: 0.4076 REMARK 3 L13: 0.3302 L23: 0.6688 REMARK 3 S TENSOR REMARK 3 S11: -0.0616 S12: 0.2346 S13: -0.0678 REMARK 3 S21: -0.1637 S22: 0.1071 S23: -0.1764 REMARK 3 S31: -0.0570 S32: 0.1636 S33: -0.0955 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 310 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.5700 -6.5567 37.2516 REMARK 3 T TENSOR REMARK 3 T11: 0.2385 T22: 0.2846 REMARK 3 T33: 0.7286 T12: 0.0109 REMARK 3 T13: -0.0969 T23: 0.1070 REMARK 3 L TENSOR REMARK 3 L11: 2.4679 L22: 1.1622 REMARK 3 L33: 2.5016 L12: 1.0550 REMARK 3 L13: -0.5269 L23: 0.2607 REMARK 3 S TENSOR REMARK 3 S11: -0.0363 S12: -0.4104 S13: -0.7503 REMARK 3 S21: 0.1656 S22: -0.1758 S23: -0.7339 REMARK 3 S31: 0.4561 S32: 0.1761 S33: 0.0156 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 498 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8427 3.4746 31.4871 REMARK 3 T TENSOR REMARK 3 T11: 0.1222 T22: 0.1313 REMARK 3 T33: 0.1768 T12: -0.0082 REMARK 3 T13: 0.0004 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.1369 L22: 1.4238 REMARK 3 L33: 1.0599 L12: 0.0523 REMARK 3 L13: -0.0102 L23: 0.0672 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: 0.0130 S13: -0.0628 REMARK 3 S21: 0.0022 S22: 0.0111 S23: 0.0455 REMARK 3 S31: -0.0058 S32: 0.0196 S33: -0.0209 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OES COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084401. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97973 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43076 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 46.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 10.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.35600 REMARK 200 FOR SHELL : 3.450 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4OER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M TRIS PH REMARK 280 8.5, 25 MM MGSO4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 71.35500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.15000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 71.35500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.15000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1003 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1065 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 499 REMARK 465 ASN A 500 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 325 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 20 -131.69 -110.42 REMARK 500 TRP A 47 -105.66 -159.15 REMARK 500 PHE A 137 58.58 -93.89 REMARK 500 LEU A 244 -137.95 -102.91 REMARK 500 THR A 279 -74.95 -87.84 REMARK 500 TYR A 298 -3.16 68.41 REMARK 500 ASP A 309 79.24 -160.96 REMARK 500 ALA A 324 -164.04 -104.97 REMARK 500 LYS A 325 -71.95 -128.83 REMARK 500 PRO A 399 46.40 -102.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 EDT A 601 O13 REMARK 620 2 EDT A 601 O15 98.4 REMARK 620 3 EDT A 601 N3 85.0 147.0 REMARK 620 4 EDT A 601 O19 85.6 136.1 76.7 REMARK 620 5 EDT A 601 O17 165.3 86.0 83.8 101.0 REMARK 620 6 EDT A 601 N8 77.3 76.3 72.5 145.9 90.2 REMARK 620 7 HOH A 701 O 91.6 66.6 146.3 69.6 103.0 139.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDT A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 608 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OER RELATED DB: PDB REMARK 900 THE SAME PROTEIN, UNLIGANDED FORM DBREF 4OES A 1 500 UNP Q9AL82 Q9AL82_BRUSS 27 526 SEQRES 1 A 500 ASP PRO LYS LEU ASN PHE SER TRP PRO VAL ASN VAL GLY SEQRES 2 A 500 PRO LEU ASN PRO HIS LEU TYR SER PRO ASN GLN MET PHE SEQRES 3 A 500 ALA GLN ASN MET VAL TYR GLU PRO LEU VAL HIS TYR ASN SEQRES 4 A 500 ALA ASP GLY THR VAL GLY PRO TRP LEU ALA GLU SER TRP SEQRES 5 A 500 GLU ALA SER GLN ASP GLY ARG SER TYR THR PHE LYS LEU SEQRES 6 A 500 ARG GLU ASP VAL LYS PHE SER ASN GLY GLU VAL PHE ASP SEQRES 7 A 500 ALA ALA ALA VAL LYS ALA ASN ILE ASP THR VAL LEU GLN SEQRES 8 A 500 ASN ARG PRO ARG HIS ASN TRP LEU GLU LEU VAL ASN GLN SEQRES 9 A 500 MET VAL SER ALA GLU VAL VAL GLY PRO TYR LYS VAL ARG SEQRES 10 A 500 ILE ASN LEU LYS LYS PRO TYR TYR PRO LEU LEU GLN GLU SEQRES 11 A 500 LEU SER LEU PRO ARG PRO PHE ARG PHE ILE ALA PRO SER SEQRES 12 A 500 GLN PHE LYS ASN GLY GLY THR ALA ASP GLY ILE VAL ALA SEQRES 13 A 500 PRO ILE GLY THR GLY PRO TRP LYS LEU THR GLU THR LYS SEQRES 14 A 500 LEU GLY GLU HIS ASP VAL PHE THR ARG ASN ASP SER TYR SEQRES 15 A 500 TRP GLY PRO LYS PRO ALA TYR GLU GLN ILE THR VAL LYS SEQRES 16 A 500 VAL ILE PRO ASP PRO ASN THR ARG ALA ILE ALA PHE GLU SEQRES 17 A 500 ALA GLY GLU ILE ASP LEU ILE TYR GLY THR GLU GLY PRO SEQRES 18 A 500 ILE SER PRO ASP THR PHE GLU ARG PHE GLN LYS MET GLY SEQRES 19 A 500 ILE TYR ASN THR GLU LEU SER GLU PRO LEU GLU THR ARG SEQRES 20 A 500 VAL LEU ALA LEU ASN THR ASN HIS GLY ALA THR LYS ASP SEQRES 21 A 500 LEU ALA VAL ARG LYS ALA ILE ASN HIS ALA VAL ASP LYS SEQRES 22 A 500 ASP THR MET ILE ALA THR VAL LEU TYR GLY THR GLN LYS SEQRES 23 A 500 ARG ALA ASP THR LEU PHE ALA ASP ASN VAL PRO TYR ALA SEQRES 24 A 500 ASN ILE GLY LEU LYS PRO TYR ALA PHE ASP PRO ALA LEU SEQRES 25 A 500 ALA ALA ARG LEU LEU ASP GLU ALA GLY TRP THR ALA LYS SEQRES 26 A 500 ALA SER GLY ASP ILE ARG GLU LYS ASP GLY GLN PRO LEU SEQRES 27 A 500 ALA ILE GLU LEU CYS PHE ILE GLY THR ASP ALA ILE SER SEQRES 28 A 500 LYS SER MET ALA GLU ILE VAL GLN ALA ASP LEU ARG LYS SEQRES 29 A 500 VAL GLY ILE ASP VAL LYS LEU THR GLY GLU GLU GLU SER SEQRES 30 A 500 SER ILE TYR ALA ARG GLN ARG ASP GLY ARG PHE ASP MET SEQRES 31 A 500 ILE PHE ASN GLN THR TRP GLY ALA PRO TYR ASP PRO HIS SEQRES 32 A 500 ALA PHE VAL SER SER MET ARG VAL PRO SER HIS ALA ASP SEQRES 33 A 500 TYR GLN ALA GLN LEU GLY LEU PRO ASP LYS ALA LYS ILE SEQRES 34 A 500 ASP ALA GLU ILE GLY GLN VAL LEU VAL SER THR ASP GLU SEQRES 35 A 500 THR ALA ARG GLN ALA LEU TYR LYS ASP ILE LEU THR ARG SEQRES 36 A 500 LEU HIS GLU GLU ALA VAL TYR LEU PRO LEU THR SER VAL SEQRES 37 A 500 THR ALA MET ALA VAL ALA LYS PRO GLU VAL GLY LYS ILE SEQRES 38 A 500 THR PHE GLY ALA MET SER SER GLU ILE PRO PHE GLU LYS SEQRES 39 A 500 LEU THR PRO LYS ALA ASN HET EDT A 601 20 HET FE A 602 1 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET GOL A 606 6 HET GOL A 607 6 HET GOL A 608 6 HETNAM EDT {[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL- HETNAM 2 EDT AMINO}-ACETIC ACID HETNAM FE FE (III) ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 EDT C10 H16 N2 O8 FORMUL 3 FE FE 3+ FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 GOL 3(C3 H8 O3) FORMUL 10 HOH *391(H2 O) HELIX 1 1 GLN A 24 TYR A 32 1 9 HELIX 2 2 ASP A 78 GLN A 91 1 14 HELIX 3 3 ASN A 92 ASN A 97 1 6 HELIX 4 4 LEU A 99 GLN A 104 1 6 HELIX 5 5 PRO A 126 LEU A 131 1 6 HELIX 6 6 ALA A 141 PHE A 145 5 5 HELIX 7 7 ASP A 199 ALA A 209 1 11 HELIX 8 8 SER A 223 GLY A 234 1 12 HELIX 9 9 HIS A 255 LYS A 259 5 5 HELIX 10 10 ASP A 260 VAL A 271 1 12 HELIX 11 11 ASP A 272 VAL A 280 1 9 HELIX 12 12 ASP A 309 GLU A 319 1 11 HELIX 13 13 ASP A 348 LYS A 364 1 17 HELIX 14 14 GLU A 375 GLY A 386 1 12 HELIX 15 15 PRO A 402 MET A 409 1 8 HELIX 16 16 HIS A 414 LEU A 421 1 8 HELIX 17 17 ASP A 425 SER A 439 1 15 HELIX 18 18 ASP A 441 GLU A 459 1 19 HELIX 19 19 PRO A 476 GLY A 479 5 4 HELIX 20 20 PRO A 491 LEU A 495 5 5 SHEET 1 A 4 LYS A 3 TRP A 8 0 SHEET 2 A 4 GLN A 191 VAL A 196 1 O THR A 193 N PHE A 6 SHEET 3 A 4 HIS A 173 ARG A 178 -1 N PHE A 176 O ILE A 192 SHEET 4 A 4 TRP A 163 LYS A 169 -1 N LYS A 169 O HIS A 173 SHEET 1 B 2 VAL A 36 TYR A 38 0 SHEET 2 B 2 VAL A 44 PRO A 46 -1 O GLY A 45 N HIS A 37 SHEET 1 C 4 ALA A 49 ALA A 54 0 SHEET 2 C 4 SER A 60 LEU A 65 -1 O LYS A 64 N GLU A 50 SHEET 3 C 4 LYS A 115 LEU A 120 -1 O VAL A 116 N PHE A 63 SHEET 4 C 4 MET A 105 GLY A 112 -1 N VAL A 106 O ASN A 119 SHEET 1 D 3 LEU A 214 GLY A 217 0 SHEET 2 D 3 MET A 471 ALA A 474 -1 O VAL A 473 N ILE A 215 SHEET 3 D 3 ASN A 237 LEU A 240 -1 N ASN A 237 O ALA A 474 SHEET 1 E 6 LYS A 286 ARG A 287 0 SHEET 2 E 6 TYR A 462 SER A 467 -1 O SER A 467 N LYS A 286 SHEET 3 E 6 THR A 246 LEU A 251 -1 N ARG A 247 O THR A 466 SHEET 4 E 6 MET A 390 GLN A 394 -1 O ILE A 391 N ALA A 250 SHEET 5 E 6 ALA A 339 ILE A 345 1 N CYS A 343 O MET A 390 SHEET 6 E 6 ASP A 368 GLU A 374 1 O LYS A 370 N ILE A 340 LINK O13 EDT A 601 FE FE A 602 1555 1555 2.05 LINK O15 EDT A 601 FE FE A 602 1555 1555 2.06 LINK N3 EDT A 601 FE FE A 602 1555 1555 2.15 LINK O19 EDT A 601 FE FE A 602 1555 1555 2.21 LINK O17 EDT A 601 FE FE A 602 1555 1555 2.23 LINK N8 EDT A 601 FE FE A 602 1555 1555 2.39 LINK FE FE A 602 O HOH A 701 1555 1555 2.37 CISPEP 1 SER A 21 PRO A 22 0 12.10 CISPEP 2 ARG A 135 PRO A 136 0 6.22 CISPEP 3 ALA A 398 PRO A 399 0 -1.64 CISPEP 4 ASP A 401 PRO A 402 0 -0.51 SITE 1 AC1 13 TYR A 20 MET A 25 TRP A 98 ARG A 135 SITE 2 AC1 13 TRP A 396 TYR A 400 FE A 602 HOH A 701 SITE 3 AC1 13 HOH A 703 HOH A 734 HOH A 778 HOH A 949 SITE 4 AC1 13 HOH A1060 SITE 1 AC2 2 EDT A 601 HOH A 701 SITE 1 AC3 6 SER A 21 PRO A 22 GLN A 24 HOH A 768 SITE 2 AC3 6 HOH A 781 HOH A 849 SITE 1 AC4 2 ARG A 287 HOH A 843 SITE 1 AC5 2 LYS A 428 ARG A 455 SITE 1 AC6 4 LYS A 304 PRO A 305 HOH A 853 HOH A1066 SITE 1 AC7 7 TRP A 8 GLN A 24 MET A 25 PHE A 26 SITE 2 AC7 7 HOH A 781 HOH A 849 HOH A 939 SITE 1 AC8 3 HIS A 255 GLY A 256 LYS A 259 CRYST1 142.710 76.300 59.580 90.00 109.51 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007007 0.000000 0.002483 0.00000 SCALE2 0.000000 0.013106 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017807 0.00000