HEADER TRANSPORT PROTEIN 13-JAN-14 4OET TITLE CRYSTAL STRUCTURE OF NIKZ FROM CAMPYLOBACTER JEJUNI, UNLIGANDED FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PEPTIDE ABC-TRANSPORT SYSTEM PERIPLASMIC PEPTIDE- COMPND 3 BINDING PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: NIKZ; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 192222; SOURCE 4 STRAIN: SUBSP. JEJUNI NCTC 11168 = ATCC 700819; SOURCE 5 GENE: CJ1584C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EXTRACYTOPLASMIC, NICKEL IMPORT, METAL TRANSPORT, ABC-TYPE IMPORTER, KEYWDS 2 EXTRACYTOPLASMIC NICKEL-BINDING PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LEBRETTE,C.CAVAZZA REVDAT 4 20-SEP-23 4OET 1 REMARK REVDAT 3 18-APR-18 4OET 1 REMARK REVDAT 2 19-NOV-14 4OET 1 JRNL REVDAT 1 01-OCT-14 4OET 0 JRNL AUTH H.LEBRETTE,C.BROCHIER-ARMANET,B.ZAMBELLI,H.DE REUSE, JRNL AUTH 2 E.BOREZEE-DURANT,S.CIURLI,C.CAVAZZA JRNL TITL PROMISCUOUS NICKEL IMPORT IN HUMAN PATHOGENS: STRUCTURE, JRNL TITL 2 THERMODYNAMICS, AND EVOLUTION OF EXTRACYTOPLASMIC JRNL TITL 3 NICKEL-BINDING PROTEINS. JRNL REF STRUCTURE V. 22 1421 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25199691 JRNL DOI 10.1016/J.STR.2014.07.012 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 40880 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2044 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0664 - 5.9150 1.00 2766 146 0.1681 0.1953 REMARK 3 2 5.9150 - 4.6964 1.00 2656 140 0.1668 0.1956 REMARK 3 3 4.6964 - 4.1032 1.00 2633 138 0.1394 0.1804 REMARK 3 4 4.1032 - 3.7282 1.00 2592 137 0.1489 0.1876 REMARK 3 5 3.7282 - 3.4611 1.00 2596 136 0.1600 0.2060 REMARK 3 6 3.4611 - 3.2571 1.00 2580 136 0.1720 0.1893 REMARK 3 7 3.2571 - 3.0940 1.00 2560 135 0.1930 0.2489 REMARK 3 8 3.0940 - 2.9593 1.00 2586 136 0.2061 0.2608 REMARK 3 9 2.9593 - 2.8454 1.00 2592 137 0.2023 0.2621 REMARK 3 10 2.8454 - 2.7472 1.00 2544 133 0.2104 0.2528 REMARK 3 11 2.7472 - 2.6614 1.00 2554 135 0.2110 0.2436 REMARK 3 12 2.6614 - 2.5853 1.00 2559 134 0.2122 0.2882 REMARK 3 13 2.5853 - 2.5172 1.00 2556 135 0.2158 0.2476 REMARK 3 14 2.5172 - 2.4558 1.00 2532 133 0.2252 0.2720 REMARK 3 15 2.4558 - 2.4000 0.99 2530 133 0.2374 0.2869 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 8300 REMARK 3 ANGLE : 0.902 11208 REMARK 3 CHIRALITY : 0.039 1188 REMARK 3 PLANARITY : 0.005 1434 REMARK 3 DIHEDRAL : 14.401 3056 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8142 64.8606 20.9181 REMARK 3 T TENSOR REMARK 3 T11: 0.2535 T22: 0.2756 REMARK 3 T33: 0.1977 T12: 0.0091 REMARK 3 T13: 0.0343 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.6329 L22: 4.8797 REMARK 3 L33: 1.1546 L12: -3.0875 REMARK 3 L13: 0.6707 L23: 0.9549 REMARK 3 S TENSOR REMARK 3 S11: 0.1022 S12: -0.2055 S13: 0.3897 REMARK 3 S21: -0.3989 S22: -0.2403 S23: -0.6935 REMARK 3 S31: -0.0119 S32: 0.1045 S33: 0.1229 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6339 74.8267 10.1003 REMARK 3 T TENSOR REMARK 3 T11: 0.1753 T22: 0.2490 REMARK 3 T33: 0.3072 T12: 0.0155 REMARK 3 T13: -0.0074 T23: -0.0753 REMARK 3 L TENSOR REMARK 3 L11: 1.7986 L22: 1.3829 REMARK 3 L33: 1.9144 L12: -0.1063 REMARK 3 L13: 0.4483 L23: -0.7991 REMARK 3 S TENSOR REMARK 3 S11: -0.0454 S12: -0.2811 S13: 0.2799 REMARK 3 S21: 0.0595 S22: 0.0202 S23: 0.1004 REMARK 3 S31: -0.1780 S32: -0.2492 S33: 0.0434 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.1517 74.6865 10.3470 REMARK 3 T TENSOR REMARK 3 T11: 0.1821 T22: 0.1283 REMARK 3 T33: 0.1364 T12: 0.0214 REMARK 3 T13: 0.0033 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 1.2896 L22: 0.9721 REMARK 3 L33: 0.8890 L12: 0.3949 REMARK 3 L13: 0.2307 L23: -0.2044 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: -0.0284 S13: -0.0108 REMARK 3 S21: -0.0156 S22: -0.0266 S23: -0.1085 REMARK 3 S31: -0.0822 S32: 0.0126 S33: 0.0432 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 79.8584 69.8325 33.1453 REMARK 3 T TENSOR REMARK 3 T11: 0.2923 T22: 0.3106 REMARK 3 T33: 0.2322 T12: -0.0502 REMARK 3 T13: 0.0783 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.6584 L22: 3.2253 REMARK 3 L33: 2.7684 L12: 1.0446 REMARK 3 L13: 2.0599 L23: 2.0321 REMARK 3 S TENSOR REMARK 3 S11: 0.0061 S12: 0.1469 S13: -0.2246 REMARK 3 S21: 0.0699 S22: -0.0145 S23: -0.1502 REMARK 3 S31: -0.1157 S32: 0.2101 S33: 0.0744 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.1711 71.3045 49.2588 REMARK 3 T TENSOR REMARK 3 T11: 0.2024 T22: 0.3173 REMARK 3 T33: 0.3424 T12: -0.0602 REMARK 3 T13: 0.0427 T23: -0.0638 REMARK 3 L TENSOR REMARK 3 L11: 1.2180 L22: 0.9256 REMARK 3 L33: 2.6414 L12: 0.4740 REMARK 3 L13: -0.2044 L23: 0.5360 REMARK 3 S TENSOR REMARK 3 S11: 0.0359 S12: 0.2336 S13: 0.0484 REMARK 3 S21: -0.0969 S22: 0.2582 S23: -0.2433 REMARK 3 S31: -0.3651 S32: 0.5215 S33: -0.2609 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 179 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.2306 64.2416 44.1971 REMARK 3 T TENSOR REMARK 3 T11: 0.1824 T22: 0.1750 REMARK 3 T33: 0.2033 T12: -0.0308 REMARK 3 T13: 0.0047 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 1.0410 L22: 1.1985 REMARK 3 L33: 2.5855 L12: 0.2683 REMARK 3 L13: 1.0137 L23: 0.1967 REMARK 3 S TENSOR REMARK 3 S11: 0.0668 S12: -0.1509 S13: -0.0609 REMARK 3 S21: -0.0197 S22: 0.0339 S23: 0.1049 REMARK 3 S31: 0.1032 S32: -0.4163 S33: -0.0739 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084402. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00446 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40880 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 46.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11300 REMARK 200 FOR THE DATA SET : 14.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.50500 REMARK 200 FOR SHELL : 4.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR-SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1DPE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % PEG 5000, 100 MM HEPES PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.53000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.23000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.60500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.23000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.53000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.60500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 24 CG CD OE1 OE2 REMARK 480 GLU B 24 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 25 -145.40 48.00 REMARK 500 ASP A 49 -101.52 -126.70 REMARK 500 TYR A 279 46.27 -93.64 REMARK 500 LYS A 295 12.83 59.53 REMARK 500 ASP A 303 81.33 -154.14 REMARK 500 ASN A 319 -168.60 -103.07 REMARK 500 LEU A 388 -158.97 -83.54 REMARK 500 LEU A 457 -72.54 -110.43 REMARK 500 ASP B 25 138.12 -36.28 REMARK 500 ASP B 49 -101.24 -127.90 REMARK 500 TYR B 279 46.23 -92.10 REMARK 500 LYS B 295 18.40 59.53 REMARK 500 ASP B 303 82.39 -156.92 REMARK 500 ASN B 319 -167.21 -104.45 REMARK 500 LEU B 457 -73.41 -110.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 454 ILE A 455 148.08 REMARK 500 PHE B 454 ILE B 455 147.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OEU RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH NI(L-HIS) REMARK 900 RELATED ID: 4OEV RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH NI(II) ION DBREF 4OET A 1 494 UNP Q0P844 Q0P844_CAMJE 18 511 DBREF 4OET B 1 494 UNP Q0P844 Q0P844_CAMJE 18 511 SEQRES 1 A 494 LYS ILE PRO LYS ASP THR LEU ILE ILE ALA VAL GLU ASN SEQRES 2 A 494 GLU ILE ALA ARG ILE ASN PRO ALA TYR SER GLU ASP HIS SEQRES 3 A 494 ASP ALA VAL ILE ASN LEU VAL PHE SER GLY LEU THR ARG SEQRES 4 A 494 PHE ASP GLU ASN MET SER LEU LYS PRO ASP LEU ALA LYS SEQRES 5 A 494 SER TRP ASP ILE SER LYS ASP GLY LEU VAL TYR ASP ILE SEQRES 6 A 494 PHE LEU ARG ASP ASP VAL LEU TRP HIS ASP GLY VAL LYS SEQRES 7 A 494 PHE SER ALA ASP ASP VAL LYS PHE SER ILE GLU ALA PHE SEQRES 8 A 494 LYS ASN PRO LYS ASN ASN SER SER ILE TYR VAL ASN PHE SEQRES 9 A 494 GLU ASP ILE LYS SER VAL GLU ILE LEU ASN PRO SER HIS SEQRES 10 A 494 VAL LYS ILE THR LEU PHE LYS PRO TYR PRO ALA PHE LEU SEQRES 11 A 494 ASP ALA LEU SER ILE GLY MET LEU PRO LYS HIS LEU LEU SEQRES 12 A 494 GLU ASN GLU ASN LEU ASN THR SER SER PHE ASN GLN ASN SEQRES 13 A 494 PRO ILE GLY THR GLY PRO TYR LYS PHE VAL LYS TRP LYS SEQRES 14 A 494 LYS GLY GLU TYR VAL GLU PHE LYS ALA ASN GLU HIS PHE SEQRES 15 A 494 TYR LEU ASP LYS VAL LYS THR PRO ARG LEU ILE ILE LYS SEQRES 16 A 494 HIS ILE PHE ASP PRO SER ILE ALA SER ALA GLU LEU LYS SEQRES 17 A 494 ASN GLY LYS ILE ASP ALA ALA LEU ILE ASP VAL SER LEU SEQRES 18 A 494 LEU ASN ILE PHE LYS ASN ASP GLU ASN PHE GLY ILE LEU SEQRES 19 A 494 ARG GLU LYS SER ALA ASP TYR ARG ALA LEU MET PHE ASN SEQRES 20 A 494 LEU ASP ASN GLU PHE LEU LYS ASP LEU LYS VAL ARG GLN SEQRES 21 A 494 ALA LEU ASN TYR ALA VAL ASP LYS GLU SER ILE VAL LYS SEQRES 22 A 494 ASN LEU LEU HIS ASP TYR ALA PHE VAL ALA ASN HIS PRO SEQRES 23 A 494 LEU GLU ARG SER TRP ALA ASN SER LYS ASN PHE LYS ILE SEQRES 24 A 494 TYR LYS TYR ASP PRO LYS LYS ALA GLU ASP LEU LEU VAL SEQRES 25 A 494 SER ALA GLY PHE LYS LYS ASN LYS ASP GLY ASN PHE GLU SEQRES 26 A 494 LYS ASP GLY LYS ILE LEU GLU PHE GLU ILE TRP ALA MET SEQRES 27 A 494 SER ASN ASP PRO LEU ARG VAL SER LEU ALA GLY ILE LEU SEQRES 28 A 494 GLN SER GLU PHE ARG LYS ILE GLY VAL VAL SER LYS VAL SEQRES 29 A 494 VAL ALA LYS PRO ALA GLY SER PHE ASP TYR SER LYS VAL SEQRES 30 A 494 ASP SER PHE LEU ILE GLY TRP GLY SER PRO LEU ASP PRO SEQRES 31 A 494 ASP PHE HIS THR PHE ARG VAL PHE GLU SER SER GLN ASP SEQRES 32 A 494 SER ALA LEU ASN ASP GLU GLY TRP ASN PHE GLY HIS TYR SEQRES 33 A 494 HIS ASP LYS LYS VAL ASP ILE ALA LEU GLN LYS ALA ARG SEQRES 34 A 494 ASN THR SER ASN LEU GLU GLU ARG LYS LYS TYR TYR LYS SEQRES 35 A 494 ASP PHE ILE ASP ALA LEU TYR GLU ASN PRO PRO PHE ILE SEQRES 36 A 494 PHE LEU ALA TYR LEU ASP PHE ALA LEU VAL TYR ASN LYS SEQRES 37 A 494 ASP LEU LYS GLY ILE LYS THR ARG THR LEU GLY HIS HIS SEQRES 38 A 494 GLY VAL GLY PHE THR TRP ASN VAL TYR GLU TRP SER LYS SEQRES 1 B 494 LYS ILE PRO LYS ASP THR LEU ILE ILE ALA VAL GLU ASN SEQRES 2 B 494 GLU ILE ALA ARG ILE ASN PRO ALA TYR SER GLU ASP HIS SEQRES 3 B 494 ASP ALA VAL ILE ASN LEU VAL PHE SER GLY LEU THR ARG SEQRES 4 B 494 PHE ASP GLU ASN MET SER LEU LYS PRO ASP LEU ALA LYS SEQRES 5 B 494 SER TRP ASP ILE SER LYS ASP GLY LEU VAL TYR ASP ILE SEQRES 6 B 494 PHE LEU ARG ASP ASP VAL LEU TRP HIS ASP GLY VAL LYS SEQRES 7 B 494 PHE SER ALA ASP ASP VAL LYS PHE SER ILE GLU ALA PHE SEQRES 8 B 494 LYS ASN PRO LYS ASN ASN SER SER ILE TYR VAL ASN PHE SEQRES 9 B 494 GLU ASP ILE LYS SER VAL GLU ILE LEU ASN PRO SER HIS SEQRES 10 B 494 VAL LYS ILE THR LEU PHE LYS PRO TYR PRO ALA PHE LEU SEQRES 11 B 494 ASP ALA LEU SER ILE GLY MET LEU PRO LYS HIS LEU LEU SEQRES 12 B 494 GLU ASN GLU ASN LEU ASN THR SER SER PHE ASN GLN ASN SEQRES 13 B 494 PRO ILE GLY THR GLY PRO TYR LYS PHE VAL LYS TRP LYS SEQRES 14 B 494 LYS GLY GLU TYR VAL GLU PHE LYS ALA ASN GLU HIS PHE SEQRES 15 B 494 TYR LEU ASP LYS VAL LYS THR PRO ARG LEU ILE ILE LYS SEQRES 16 B 494 HIS ILE PHE ASP PRO SER ILE ALA SER ALA GLU LEU LYS SEQRES 17 B 494 ASN GLY LYS ILE ASP ALA ALA LEU ILE ASP VAL SER LEU SEQRES 18 B 494 LEU ASN ILE PHE LYS ASN ASP GLU ASN PHE GLY ILE LEU SEQRES 19 B 494 ARG GLU LYS SER ALA ASP TYR ARG ALA LEU MET PHE ASN SEQRES 20 B 494 LEU ASP ASN GLU PHE LEU LYS ASP LEU LYS VAL ARG GLN SEQRES 21 B 494 ALA LEU ASN TYR ALA VAL ASP LYS GLU SER ILE VAL LYS SEQRES 22 B 494 ASN LEU LEU HIS ASP TYR ALA PHE VAL ALA ASN HIS PRO SEQRES 23 B 494 LEU GLU ARG SER TRP ALA ASN SER LYS ASN PHE LYS ILE SEQRES 24 B 494 TYR LYS TYR ASP PRO LYS LYS ALA GLU ASP LEU LEU VAL SEQRES 25 B 494 SER ALA GLY PHE LYS LYS ASN LYS ASP GLY ASN PHE GLU SEQRES 26 B 494 LYS ASP GLY LYS ILE LEU GLU PHE GLU ILE TRP ALA MET SEQRES 27 B 494 SER ASN ASP PRO LEU ARG VAL SER LEU ALA GLY ILE LEU SEQRES 28 B 494 GLN SER GLU PHE ARG LYS ILE GLY VAL VAL SER LYS VAL SEQRES 29 B 494 VAL ALA LYS PRO ALA GLY SER PHE ASP TYR SER LYS VAL SEQRES 30 B 494 ASP SER PHE LEU ILE GLY TRP GLY SER PRO LEU ASP PRO SEQRES 31 B 494 ASP PHE HIS THR PHE ARG VAL PHE GLU SER SER GLN ASP SEQRES 32 B 494 SER ALA LEU ASN ASP GLU GLY TRP ASN PHE GLY HIS TYR SEQRES 33 B 494 HIS ASP LYS LYS VAL ASP ILE ALA LEU GLN LYS ALA ARG SEQRES 34 B 494 ASN THR SER ASN LEU GLU GLU ARG LYS LYS TYR TYR LYS SEQRES 35 B 494 ASP PHE ILE ASP ALA LEU TYR GLU ASN PRO PRO PHE ILE SEQRES 36 B 494 PHE LEU ALA TYR LEU ASP PHE ALA LEU VAL TYR ASN LYS SEQRES 37 B 494 ASP LEU LYS GLY ILE LYS THR ARG THR LEU GLY HIS HIS SEQRES 38 B 494 GLY VAL GLY PHE THR TRP ASN VAL TYR GLU TRP SER LYS HET GOL A 501 6 HET GOL A 502 6 HET GOL A 503 6 HET GOL A 504 6 HET GOL A 505 6 HET GOL A 506 6 HET GOL B 501 6 HET GOL B 502 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 8(C3 H8 O3) FORMUL 11 HOH *432(H2 O) HELIX 1 1 ASN A 19 SER A 23 5 5 HELIX 2 2 VAL A 29 PHE A 34 1 6 HELIX 3 3 SER A 80 ASN A 93 1 14 HELIX 4 4 PRO A 94 ASN A 97 5 4 HELIX 5 5 ILE A 100 GLU A 105 5 6 HELIX 6 6 ALA A 128 LEU A 133 1 6 HELIX 7 7 PRO A 139 GLU A 144 1 6 HELIX 8 8 SER A 151 ASN A 156 5 6 HELIX 9 9 ASP A 199 ASN A 209 1 11 HELIX 10 10 ASP A 218 PHE A 225 5 8 HELIX 11 11 ASP A 255 ALA A 265 1 11 HELIX 12 12 ASP A 267 LEU A 275 1 9 HELIX 13 13 ASP A 303 ALA A 314 1 12 HELIX 14 14 ASP A 341 ILE A 358 1 18 HELIX 15 15 THR A 394 GLU A 399 1 6 HELIX 16 16 SER A 400 ASP A 403 5 4 HELIX 17 17 ASP A 418 ARG A 429 1 12 HELIX 18 18 ASN A 433 ASN A 451 1 19 HELIX 19 19 GLY A 479 VAL A 483 5 5 HELIX 20 20 ASN A 488 TRP A 492 5 5 HELIX 21 21 ASN B 19 SER B 23 5 5 HELIX 22 22 VAL B 29 PHE B 34 1 6 HELIX 23 23 SER B 80 ASN B 93 1 14 HELIX 24 24 PRO B 94 ASN B 97 5 4 HELIX 25 25 ILE B 100 GLU B 105 5 6 HELIX 26 26 ALA B 128 LEU B 133 1 6 HELIX 27 27 PRO B 139 GLU B 144 1 6 HELIX 28 28 SER B 151 ASN B 156 5 6 HELIX 29 29 ASP B 199 ASN B 209 1 11 HELIX 30 30 ASP B 218 LYS B 226 5 9 HELIX 31 31 ASP B 255 ALA B 265 1 11 HELIX 32 32 ASP B 267 LEU B 275 1 9 HELIX 33 33 ASP B 303 ALA B 314 1 12 HELIX 34 34 ASP B 341 ILE B 358 1 18 HELIX 35 35 THR B 394 GLU B 399 1 6 HELIX 36 36 SER B 400 ASP B 403 5 4 HELIX 37 37 ASP B 418 ARG B 429 1 12 HELIX 38 38 ASN B 433 ASN B 451 1 19 HELIX 39 39 GLY B 479 VAL B 483 5 5 HELIX 40 40 ASN B 488 TRP B 492 5 5 SHEET 1 A 4 THR A 6 VAL A 11 0 SHEET 2 A 4 ARG A 191 HIS A 196 1 O ILE A 193 N LEU A 7 SHEET 3 A 4 TYR A 173 ALA A 178 -1 N PHE A 176 O LEU A 192 SHEET 4 A 4 TYR A 163 LYS A 169 -1 N LYS A 164 O LYS A 177 SHEET 1 B 2 THR A 38 PHE A 40 0 SHEET 2 B 2 LEU A 46 PRO A 48 -1 O LYS A 47 N ARG A 39 SHEET 1 C 4 ALA A 51 ILE A 56 0 SHEET 2 C 4 VAL A 62 LEU A 67 -1 O ASP A 64 N ASP A 55 SHEET 3 C 4 HIS A 117 LEU A 122 -1 O ILE A 120 N TYR A 63 SHEET 4 C 4 ILE A 107 ASN A 114 -1 N GLU A 111 O LYS A 119 SHEET 1 D 3 ALA A 214 ILE A 217 0 SHEET 2 D 3 PHE A 454 ASN A 467 -1 O VAL A 465 N ALA A 215 SHEET 3 D 3 ALA A 280 VAL A 282 -1 N PHE A 281 O TYR A 459 SHEET 1 E 6 ALA A 214 ILE A 217 0 SHEET 2 E 6 PHE A 454 ASN A 467 -1 O VAL A 465 N ALA A 215 SHEET 3 E 6 PHE A 231 PHE A 246 -1 N GLU A 236 O PHE A 462 SHEET 4 E 6 SER A 379 TRP A 384 -1 O PHE A 380 N MET A 245 SHEET 5 E 6 GLU A 332 MET A 338 1 N TRP A 336 O LEU A 381 SHEET 6 E 6 VAL A 361 LYS A 367 1 O LYS A 363 N ILE A 335 SHEET 1 F 3 LYS A 317 LYS A 318 0 SHEET 2 F 3 PHE A 324 LYS A 326 -1 O GLU A 325 N LYS A 317 SHEET 3 F 3 LYS A 329 ILE A 330 -1 O LYS A 329 N LYS A 326 SHEET 1 G 4 THR B 6 VAL B 11 0 SHEET 2 G 4 ARG B 191 HIS B 196 1 O ILE B 193 N LEU B 7 SHEET 3 G 4 TYR B 173 ALA B 178 -1 N PHE B 176 O LEU B 192 SHEET 4 G 4 TYR B 163 LYS B 169 -1 N LYS B 164 O LYS B 177 SHEET 1 H 2 THR B 38 PHE B 40 0 SHEET 2 H 2 LEU B 46 PRO B 48 -1 O LYS B 47 N ARG B 39 SHEET 1 I 4 ALA B 51 ILE B 56 0 SHEET 2 I 4 VAL B 62 LEU B 67 -1 O ASP B 64 N ASP B 55 SHEET 3 I 4 HIS B 117 LEU B 122 -1 O VAL B 118 N ILE B 65 SHEET 4 I 4 ILE B 107 ASN B 114 -1 N GLU B 111 O LYS B 119 SHEET 1 J 3 ALA B 214 ILE B 217 0 SHEET 2 J 3 PHE B 454 ASN B 467 -1 O ALA B 463 N ILE B 217 SHEET 3 J 3 ALA B 280 VAL B 282 -1 N PHE B 281 O TYR B 459 SHEET 1 K 6 ALA B 214 ILE B 217 0 SHEET 2 K 6 PHE B 454 ASN B 467 -1 O ALA B 463 N ILE B 217 SHEET 3 K 6 PHE B 231 PHE B 246 -1 N GLU B 236 O PHE B 462 SHEET 4 K 6 SER B 379 TRP B 384 -1 O PHE B 380 N MET B 245 SHEET 5 K 6 GLU B 332 MET B 338 1 N TRP B 336 O LEU B 381 SHEET 6 K 6 VAL B 361 LYS B 367 1 O LYS B 363 N ILE B 335 SHEET 1 L 3 LYS B 317 LYS B 318 0 SHEET 2 L 3 PHE B 324 LYS B 326 -1 O GLU B 325 N LYS B 317 SHEET 3 L 3 LYS B 329 ILE B 330 -1 O LYS B 329 N LYS B 326 SITE 1 AC1 7 PHE A 66 LEU A 67 ASP A 69 ARG A 235 SITE 2 AC1 7 PHE A 281 HOH A 615 HOH A 664 SITE 1 AC2 6 LEU A 248 ARG A 259 HIS A 415 TYR A 416 SITE 2 AC2 6 HIS A 417 ASN A 451 SITE 1 AC3 5 TYR A 466 LEU A 470 LYS A 471 GLY A 472 SITE 2 AC3 5 ILE A 473 SITE 1 AC4 4 ASP A 55 PHE A 66 ARG A 235 HOH A 835 SITE 1 AC5 3 MET A 338 ARG A 344 GLY A 383 SITE 1 AC6 7 MET A 44 ASP A 131 TRP A 291 PRO A 387 SITE 2 AC6 7 LEU A 388 ASP A 389 HOH A 842 SITE 1 AC7 5 MET B 338 ARG B 344 PHE B 380 ILE B 382 SITE 2 AC7 5 GLY B 383 SITE 1 AC8 9 ALA B 10 VAL B 11 GLU B 12 ILE B 197 SITE 2 AC8 9 PHE B 198 PRO B 200 ALA B 203 LEU B 216 SITE 3 AC8 9 HOH B 712 CRYST1 81.060 85.210 148.460 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012337 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006736 0.00000