data_4OHB # _entry.id 4OHB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OHB pdb_00004ohb 10.2210/pdb4ohb/pdb RCSB RCSB084492 ? ? WWPDB D_1000084492 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-25 2 'Structure model' 1 1 2016-10-19 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_database_2.pdbx_DOI' 11 4 'Structure model' '_database_2.pdbx_database_accession' 12 4 'Structure model' '_struct_ref_seq_dif.details' 13 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 14 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 15 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4OHB _pdbx_database_status.status_code REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2014-01-17 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4OHR _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhao, G.' 1 'Zhang, Y.' 2 'Liu, G.' 3 'Wu, G.' 4 'He, X.' 5 # _citation.id primary _citation.title ;Structure of the N-glycosidase MilB in complex with hydroxymethyl CMP reveals its Arg23 specifically recognizes the substrate and controls its entry ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 42 _citation.page_first 8115 _citation.page_last 8124 _citation.year 2014 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24920828 _citation.pdbx_database_id_DOI 10.1093/nar/gku486 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhao, G.' 1 ? primary 'Wu, G.' 2 ? primary 'Zhang, Y.' 3 ? primary 'Liu, G.' 4 ? primary 'Han, T.' 5 ? primary 'Deng, Z.' 6 ? primary 'He, X.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CMP/hydroxymethyl CMP hydrolase' 20469.988 1 ? E103A ? ? 2 non-polymer syn ;5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) ; 353.223 1 ? ? ? ? 3 water nat water 18.015 37 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMTTTPKPRTAPAVGSVFLGGPFRQLVDPRTGVMSSGDQNVFSRLIEHFESRGTTVYNAHR REAWGAEFLSPAEATRLDHDEIKAADVFVAFPGVPASPGTHVAIGWASGMGKPMVLLLERDEDYAFLVTGLESQANVEIL RFSGTEEIVERLDGAVARVLGRAGEPTVIG ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMTTTPKPRTAPAVGSVFLGGPFRQLVDPRTGVMSSGDQNVFSRLIEHFESRGTTVYNAHR REAWGAEFLSPAEATRLDHDEIKAADVFVAFPGVPASPGTHVAIGWASGMGKPMVLLLERDEDYAFLVTGLESQANVEIL RFSGTEEIVERLDGAVARVLGRAGEPTVIG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) ; 5HM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 THR n 1 23 THR n 1 24 THR n 1 25 PRO n 1 26 LYS n 1 27 PRO n 1 28 ARG n 1 29 THR n 1 30 ALA n 1 31 PRO n 1 32 ALA n 1 33 VAL n 1 34 GLY n 1 35 SER n 1 36 VAL n 1 37 PHE n 1 38 LEU n 1 39 GLY n 1 40 GLY n 1 41 PRO n 1 42 PHE n 1 43 ARG n 1 44 GLN n 1 45 LEU n 1 46 VAL n 1 47 ASP n 1 48 PRO n 1 49 ARG n 1 50 THR n 1 51 GLY n 1 52 VAL n 1 53 MET n 1 54 SER n 1 55 SER n 1 56 GLY n 1 57 ASP n 1 58 GLN n 1 59 ASN n 1 60 VAL n 1 61 PHE n 1 62 SER n 1 63 ARG n 1 64 LEU n 1 65 ILE n 1 66 GLU n 1 67 HIS n 1 68 PHE n 1 69 GLU n 1 70 SER n 1 71 ARG n 1 72 GLY n 1 73 THR n 1 74 THR n 1 75 VAL n 1 76 TYR n 1 77 ASN n 1 78 ALA n 1 79 HIS n 1 80 ARG n 1 81 ARG n 1 82 GLU n 1 83 ALA n 1 84 TRP n 1 85 GLY n 1 86 ALA n 1 87 GLU n 1 88 PHE n 1 89 LEU n 1 90 SER n 1 91 PRO n 1 92 ALA n 1 93 GLU n 1 94 ALA n 1 95 THR n 1 96 ARG n 1 97 LEU n 1 98 ASP n 1 99 HIS n 1 100 ASP n 1 101 GLU n 1 102 ILE n 1 103 LYS n 1 104 ALA n 1 105 ALA n 1 106 ASP n 1 107 VAL n 1 108 PHE n 1 109 VAL n 1 110 ALA n 1 111 PHE n 1 112 PRO n 1 113 GLY n 1 114 VAL n 1 115 PRO n 1 116 ALA n 1 117 SER n 1 118 PRO n 1 119 GLY n 1 120 THR n 1 121 HIS n 1 122 VAL n 1 123 ALA n 1 124 ILE n 1 125 GLY n 1 126 TRP n 1 127 ALA n 1 128 SER n 1 129 GLY n 1 130 MET n 1 131 GLY n 1 132 LYS n 1 133 PRO n 1 134 MET n 1 135 VAL n 1 136 LEU n 1 137 LEU n 1 138 LEU n 1 139 GLU n 1 140 ARG n 1 141 ASP n 1 142 GLU n 1 143 ASP n 1 144 TYR n 1 145 ALA n 1 146 PHE n 1 147 LEU n 1 148 VAL n 1 149 THR n 1 150 GLY n 1 151 LEU n 1 152 GLU n 1 153 SER n 1 154 GLN n 1 155 ALA n 1 156 ASN n 1 157 VAL n 1 158 GLU n 1 159 ILE n 1 160 LEU n 1 161 ARG n 1 162 PHE n 1 163 SER n 1 164 GLY n 1 165 THR n 1 166 GLU n 1 167 GLU n 1 168 ILE n 1 169 VAL n 1 170 GLU n 1 171 ARG n 1 172 LEU n 1 173 ASP n 1 174 GLY n 1 175 ALA n 1 176 VAL n 1 177 ALA n 1 178 ARG n 1 179 VAL n 1 180 LEU n 1 181 GLY n 1 182 ARG n 1 183 ALA n 1 184 GLY n 1 185 GLU n 1 186 PRO n 1 187 THR n 1 188 VAL n 1 189 ILE n 1 190 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MilB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces rimofaciens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 504097 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5HM 'RNA linking' n ;5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) ; ;5-hydroxymethylcytidine 5'-monophosphate ; 'C10 H16 N3 O9 P' 353.223 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 ? ? ? A . n A 1 22 THR 22 2 ? ? ? A . n A 1 23 THR 23 3 ? ? ? A . n A 1 24 THR 24 4 ? ? ? A . n A 1 25 PRO 25 5 ? ? ? A . n A 1 26 LYS 26 6 ? ? ? A . n A 1 27 PRO 27 7 ? ? ? A . n A 1 28 ARG 28 8 ? ? ? A . n A 1 29 THR 29 9 ? ? ? A . n A 1 30 ALA 30 10 ? ? ? A . n A 1 31 PRO 31 11 ? ? ? A . n A 1 32 ALA 32 12 12 ALA ALA A . n A 1 33 VAL 33 13 13 VAL VAL A . n A 1 34 GLY 34 14 14 GLY GLY A . n A 1 35 SER 35 15 15 SER SER A . n A 1 36 VAL 36 16 16 VAL VAL A . n A 1 37 PHE 37 17 17 PHE PHE A . n A 1 38 LEU 38 18 18 LEU LEU A . n A 1 39 GLY 39 19 19 GLY GLY A . n A 1 40 GLY 40 20 20 GLY GLY A . n A 1 41 PRO 41 21 21 PRO PRO A . n A 1 42 PHE 42 22 22 PHE PHE A . n A 1 43 ARG 43 23 23 ARG ARG A . n A 1 44 GLN 44 24 24 GLN GLN A . n A 1 45 LEU 45 25 25 LEU LEU A . n A 1 46 VAL 46 26 26 VAL VAL A . n A 1 47 ASP 47 27 27 ASP ASP A . n A 1 48 PRO 48 28 28 PRO PRO A . n A 1 49 ARG 49 29 29 ARG ARG A . n A 1 50 THR 50 30 30 THR THR A . n A 1 51 GLY 51 31 31 GLY GLY A . n A 1 52 VAL 52 32 32 VAL VAL A . n A 1 53 MET 53 33 33 MET MET A . n A 1 54 SER 54 34 34 SER SER A . n A 1 55 SER 55 35 35 SER SER A . n A 1 56 GLY 56 36 36 GLY GLY A . n A 1 57 ASP 57 37 37 ASP ASP A . n A 1 58 GLN 58 38 38 GLN GLN A . n A 1 59 ASN 59 39 39 ASN ASN A . n A 1 60 VAL 60 40 40 VAL VAL A . n A 1 61 PHE 61 41 41 PHE PHE A . n A 1 62 SER 62 42 42 SER SER A . n A 1 63 ARG 63 43 43 ARG ARG A . n A 1 64 LEU 64 44 44 LEU LEU A . n A 1 65 ILE 65 45 45 ILE ILE A . n A 1 66 GLU 66 46 46 GLU GLU A . n A 1 67 HIS 67 47 47 HIS HIS A . n A 1 68 PHE 68 48 48 PHE PHE A . n A 1 69 GLU 69 49 49 GLU GLU A . n A 1 70 SER 70 50 50 SER SER A . n A 1 71 ARG 71 51 51 ARG ARG A . n A 1 72 GLY 72 52 52 GLY GLY A . n A 1 73 THR 73 53 53 THR THR A . n A 1 74 THR 74 54 54 THR THR A . n A 1 75 VAL 75 55 55 VAL VAL A . n A 1 76 TYR 76 56 56 TYR TYR A . n A 1 77 ASN 77 57 57 ASN ASN A . n A 1 78 ALA 78 58 58 ALA ALA A . n A 1 79 HIS 79 59 59 HIS HIS A . n A 1 80 ARG 80 60 60 ARG ARG A . n A 1 81 ARG 81 61 61 ARG ARG A . n A 1 82 GLU 82 62 62 GLU GLU A . n A 1 83 ALA 83 63 63 ALA ALA A . n A 1 84 TRP 84 64 64 TRP TRP A . n A 1 85 GLY 85 65 65 GLY GLY A . n A 1 86 ALA 86 66 66 ALA ALA A . n A 1 87 GLU 87 67 67 GLU GLU A . n A 1 88 PHE 88 68 68 PHE PHE A . n A 1 89 LEU 89 69 69 LEU LEU A . n A 1 90 SER 90 70 70 SER SER A . n A 1 91 PRO 91 71 71 PRO PRO A . n A 1 92 ALA 92 72 72 ALA ALA A . n A 1 93 GLU 93 73 73 GLU GLU A . n A 1 94 ALA 94 74 74 ALA ALA A . n A 1 95 THR 95 75 75 THR THR A . n A 1 96 ARG 96 76 76 ARG ARG A . n A 1 97 LEU 97 77 77 LEU LEU A . n A 1 98 ASP 98 78 78 ASP ASP A . n A 1 99 HIS 99 79 79 HIS HIS A . n A 1 100 ASP 100 80 80 ASP ASP A . n A 1 101 GLU 101 81 81 GLU GLU A . n A 1 102 ILE 102 82 82 ILE ILE A . n A 1 103 LYS 103 83 83 LYS LYS A . n A 1 104 ALA 104 84 84 ALA ALA A . n A 1 105 ALA 105 85 85 ALA ALA A . n A 1 106 ASP 106 86 86 ASP ASP A . n A 1 107 VAL 107 87 87 VAL VAL A . n A 1 108 PHE 108 88 88 PHE PHE A . n A 1 109 VAL 109 89 89 VAL VAL A . n A 1 110 ALA 110 90 90 ALA ALA A . n A 1 111 PHE 111 91 91 PHE PHE A . n A 1 112 PRO 112 92 92 PRO PRO A . n A 1 113 GLY 113 93 93 GLY GLY A . n A 1 114 VAL 114 94 94 VAL VAL A . n A 1 115 PRO 115 95 95 PRO PRO A . n A 1 116 ALA 116 96 96 ALA ALA A . n A 1 117 SER 117 97 97 SER SER A . n A 1 118 PRO 118 98 98 PRO PRO A . n A 1 119 GLY 119 99 99 GLY GLY A . n A 1 120 THR 120 100 100 THR THR A . n A 1 121 HIS 121 101 101 HIS HIS A . n A 1 122 VAL 122 102 102 VAL VAL A . n A 1 123 ALA 123 103 103 ALA ALA A . n A 1 124 ILE 124 104 104 ILE ILE A . n A 1 125 GLY 125 105 105 GLY GLY A . n A 1 126 TRP 126 106 106 TRP TRP A . n A 1 127 ALA 127 107 107 ALA ALA A . n A 1 128 SER 128 108 108 SER SER A . n A 1 129 GLY 129 109 109 GLY GLY A . n A 1 130 MET 130 110 110 MET MET A . n A 1 131 GLY 131 111 111 GLY GLY A . n A 1 132 LYS 132 112 112 LYS LYS A . n A 1 133 PRO 133 113 113 PRO PRO A . n A 1 134 MET 134 114 114 MET MET A . n A 1 135 VAL 135 115 115 VAL VAL A . n A 1 136 LEU 136 116 116 LEU LEU A . n A 1 137 LEU 137 117 117 LEU LEU A . n A 1 138 LEU 138 118 118 LEU LEU A . n A 1 139 GLU 139 119 119 GLU GLU A . n A 1 140 ARG 140 120 120 ARG ARG A . n A 1 141 ASP 141 121 121 ASP ASP A . n A 1 142 GLU 142 122 122 GLU GLU A . n A 1 143 ASP 143 123 123 ASP ASP A . n A 1 144 TYR 144 124 124 TYR TYR A . n A 1 145 ALA 145 125 125 ALA ALA A . n A 1 146 PHE 146 126 126 PHE PHE A . n A 1 147 LEU 147 127 127 LEU LEU A . n A 1 148 VAL 148 128 128 VAL VAL A . n A 1 149 THR 149 129 129 THR THR A . n A 1 150 GLY 150 130 130 GLY GLY A . n A 1 151 LEU 151 131 131 LEU LEU A . n A 1 152 GLU 152 132 132 GLU GLU A . n A 1 153 SER 153 133 133 SER SER A . n A 1 154 GLN 154 134 134 GLN GLN A . n A 1 155 ALA 155 135 135 ALA ALA A . n A 1 156 ASN 156 136 136 ASN ASN A . n A 1 157 VAL 157 137 137 VAL VAL A . n A 1 158 GLU 158 138 138 GLU GLU A . n A 1 159 ILE 159 139 139 ILE ILE A . n A 1 160 LEU 160 140 140 LEU LEU A . n A 1 161 ARG 161 141 141 ARG ARG A . n A 1 162 PHE 162 142 142 PHE PHE A . n A 1 163 SER 163 143 143 SER SER A . n A 1 164 GLY 164 144 144 GLY GLY A . n A 1 165 THR 165 145 145 THR THR A . n A 1 166 GLU 166 146 146 GLU GLU A . n A 1 167 GLU 167 147 147 GLU GLU A . n A 1 168 ILE 168 148 148 ILE ILE A . n A 1 169 VAL 169 149 149 VAL VAL A . n A 1 170 GLU 170 150 150 GLU GLU A . n A 1 171 ARG 171 151 151 ARG ARG A . n A 1 172 LEU 172 152 152 LEU LEU A . n A 1 173 ASP 173 153 153 ASP ASP A . n A 1 174 GLY 174 154 154 GLY GLY A . n A 1 175 ALA 175 155 155 ALA ALA A . n A 1 176 VAL 176 156 156 VAL VAL A . n A 1 177 ALA 177 157 157 ALA ALA A . n A 1 178 ARG 178 158 158 ARG ARG A . n A 1 179 VAL 179 159 159 VAL VAL A . n A 1 180 LEU 180 160 160 LEU LEU A . n A 1 181 GLY 181 161 161 GLY GLY A . n A 1 182 ARG 182 162 162 ARG ARG A . n A 1 183 ALA 183 163 163 ALA ALA A . n A 1 184 GLY 184 164 164 GLY GLY A . n A 1 185 GLU 185 165 165 GLU GLU A . n A 1 186 PRO 186 166 166 PRO PRO A . n A 1 187 THR 187 167 167 THR THR A . n A 1 188 VAL 188 168 168 VAL VAL A . n A 1 189 ILE 189 169 169 ILE ILE A . n A 1 190 GLY 190 170 170 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5HM 1 201 1 5HM 5HM A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 8 HOH HOH A . C 3 HOH 7 307 9 HOH HOH A . C 3 HOH 8 308 10 HOH HOH A . C 3 HOH 9 309 11 HOH HOH A . C 3 HOH 10 310 12 HOH HOH A . C 3 HOH 11 311 13 HOH HOH A . C 3 HOH 12 312 14 HOH HOH A . C 3 HOH 13 313 15 HOH HOH A . C 3 HOH 14 314 16 HOH HOH A . C 3 HOH 15 315 17 HOH HOH A . C 3 HOH 16 316 19 HOH HOH A . C 3 HOH 17 317 20 HOH HOH A . C 3 HOH 18 318 21 HOH HOH A . C 3 HOH 19 319 22 HOH HOH A . C 3 HOH 20 320 24 HOH HOH A . C 3 HOH 21 321 26 HOH HOH A . C 3 HOH 22 322 27 HOH HOH A . C 3 HOH 23 323 28 HOH HOH A . C 3 HOH 24 324 31 HOH HOH A . C 3 HOH 25 325 32 HOH HOH A . C 3 HOH 26 326 33 HOH HOH A . C 3 HOH 27 327 34 HOH HOH A . C 3 HOH 28 328 37 HOH HOH A . C 3 HOH 29 329 39 HOH HOH A . C 3 HOH 30 330 40 HOH HOH A . C 3 HOH 31 331 41 HOH HOH A . C 3 HOH 32 332 42 HOH HOH A . C 3 HOH 33 333 43 HOH HOH A . C 3 HOH 34 334 44 HOH HOH A . C 3 HOH 35 335 45 HOH HOH A . C 3 HOH 36 336 46 HOH HOH A . C 3 HOH 37 337 48 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.7.0032 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.length_a 45.426 _cell.length_b 101.808 _cell.length_c 81.744 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4OHB _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 4OHB _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4OHB _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.827 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 46.72 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;16% PEG 4000, 0.08M Magnesium chloride hexahydrate, 0.1M Tris hydrochloride, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U # _reflns.entry_id 4OHB _reflns.d_resolution_high 2.400 _reflns.d_resolution_low 50.000 _reflns.number_obs 7108 _reflns.pdbx_Rmerge_I_obs 0.125 _reflns.pdbx_netI_over_sigmaI 9.100 _reflns.pdbx_chi_squared 1.000 _reflns.pdbx_redundancy 4.400 _reflns.percent_possible_obs 92.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.400 2.490 ? ? ? 0 0.460 ? ? 1.006 4.200 ? ? ? 735 ? ? ? ? 98.700 ? ? 1 1 2.490 2.590 ? ? ? 0 0.374 ? ? 1.004 4.500 ? ? ? 736 ? ? ? ? 97.900 ? ? 2 1 2.590 2.700 ? ? ? 0 0.441 ? ? 0.994 3.700 ? ? ? 704 ? ? ? ? 92.800 ? ? 3 1 2.700 2.850 ? ? ? 0 0.251 ? ? 0.993 4.600 ? ? ? 752 ? ? ? ? 97.900 ? ? 4 1 2.850 3.020 ? ? ? 0 0.182 ? ? 1.005 4.700 ? ? ? 751 ? ? ? ? 98.300 ? ? 5 1 3.020 3.260 ? ? ? 0 0.144 ? ? 1.003 4.700 ? ? ? 745 ? ? ? ? 97.800 ? ? 6 1 3.260 3.580 ? ? ? 0 0.123 ? ? 0.997 4.200 ? ? ? 634 ? ? ? ? 83.900 ? ? 7 1 3.580 4.100 ? ? ? 0 0.116 ? ? 0.999 3.900 ? ? ? 494 ? ? ? ? 63.200 ? ? 8 1 4.100 5.170 ? ? ? 0 0.091 ? ? 0.997 4.700 ? ? ? 764 ? ? ? ? 96.600 ? ? 9 1 5.170 50.000 ? ? ? 0 0.069 ? ? 0.998 4.400 ? ? ? 793 ? ? ? ? 94.400 ? ? 10 1 # _refine.entry_id 4OHB _refine.ls_d_res_high 2.4000 _refine.ls_d_res_low 43.2500 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 91.6200 _refine.ls_number_reflns_obs 7060 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1954 _refine.ls_R_factor_R_work 0.1924 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2570 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.7000 _refine.ls_number_reflns_R_free 330 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 41.1590 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 3.2000 _refine.aniso_B[2][2] -2.0400 _refine.aniso_B[3][3] -1.1600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9540 _refine.correlation_coeff_Fo_to_Fc_free 0.9250 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.4300 _refine.pdbx_overall_ESU_R_Free 0.2810 _refine.overall_SU_ML 0.2100 _refine.overall_SU_B 9.3510 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 111.870 _refine.B_iso_min 21.330 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1206 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 37 _refine_hist.number_atoms_total 1266 _refine_hist.d_res_high 2.4000 _refine_hist.d_res_low 43.2500 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1268 0.015 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1187 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1725 1.761 1.973 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2720 0.854 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 160 6.361 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 58 32.546 22.586 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 191 17.194 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13 17.094 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 190 0.089 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1452 0.008 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 302 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 640 3.274 3.901 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 639 3.274 3.896 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 800 5.046 5.832 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.4020 _refine_ls_shell.d_res_low 2.4640 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.4000 _refine_ls_shell.number_reflns_R_work 503 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2610 _refine_ls_shell.R_factor_R_free 0.4480 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 16 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 519 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4OHB _struct.title ;Crystal structure of MilB E103A in complex with 5-hydroxymethylcytidine 5'-monophosphate (hmCMP) from Streptomyces rimofaciens ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OHB _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'hydrolase, protein-hmCMP complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B4Y381_9ACTO _struct_ref.pdbx_db_accession B4Y381 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTTTPKPRTAPAVGSVFLGGPFRQLVDPRTGVMSSGDQNVFSRLIEHFESRGTTVYNAHRREAWGAEFLSPAEATRLDHD EIKAADVFVAFPGVPASPGTHVEIGWASGMGKPMVLLLERDEDYAFLVTGLESQANVEILRFSGTEEIVERLDGAVARVL GRAGEPTVIG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4OHB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 190 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B4Y381 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 170 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 170 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4OHB MET A 1 ? UNP B4Y381 ? ? 'expression tag' -19 1 1 4OHB GLY A 2 ? UNP B4Y381 ? ? 'expression tag' -18 2 1 4OHB SER A 3 ? UNP B4Y381 ? ? 'expression tag' -17 3 1 4OHB SER A 4 ? UNP B4Y381 ? ? 'expression tag' -16 4 1 4OHB HIS A 5 ? UNP B4Y381 ? ? 'expression tag' -15 5 1 4OHB HIS A 6 ? UNP B4Y381 ? ? 'expression tag' -14 6 1 4OHB HIS A 7 ? UNP B4Y381 ? ? 'expression tag' -13 7 1 4OHB HIS A 8 ? UNP B4Y381 ? ? 'expression tag' -12 8 1 4OHB HIS A 9 ? UNP B4Y381 ? ? 'expression tag' -11 9 1 4OHB HIS A 10 ? UNP B4Y381 ? ? 'expression tag' -10 10 1 4OHB SER A 11 ? UNP B4Y381 ? ? 'expression tag' -9 11 1 4OHB SER A 12 ? UNP B4Y381 ? ? 'expression tag' -8 12 1 4OHB GLY A 13 ? UNP B4Y381 ? ? 'expression tag' -7 13 1 4OHB LEU A 14 ? UNP B4Y381 ? ? 'expression tag' -6 14 1 4OHB VAL A 15 ? UNP B4Y381 ? ? 'expression tag' -5 15 1 4OHB PRO A 16 ? UNP B4Y381 ? ? 'expression tag' -4 16 1 4OHB ARG A 17 ? UNP B4Y381 ? ? 'expression tag' -3 17 1 4OHB GLY A 18 ? UNP B4Y381 ? ? 'expression tag' -2 18 1 4OHB SER A 19 ? UNP B4Y381 ? ? 'expression tag' -1 19 1 4OHB HIS A 20 ? UNP B4Y381 ? ? 'expression tag' 0 20 1 4OHB ALA A 123 ? UNP B4Y381 GLU 103 'engineered mutation' 103 21 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2690 ? 2 MORE -27 ? 2 'SSA (A^2)' 13120 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 2 1,2 A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 42 ? VAL A 46 ? PHE A 22 VAL A 26 5 ? 5 HELX_P HELX_P2 2 SER A 54 ? SER A 70 ? SER A 34 SER A 50 1 ? 17 HELX_P HELX_P3 3 ALA A 78 ? GLU A 82 ? ALA A 58 GLU A 62 1 ? 5 HELX_P HELX_P4 4 ALA A 83 ? ALA A 86 ? ALA A 63 ALA A 66 5 ? 4 HELX_P HELX_P5 5 SER A 90 ? ALA A 105 ? SER A 70 ALA A 85 1 ? 16 HELX_P HELX_P6 6 SER A 117 ? MET A 130 ? SER A 97 MET A 110 1 ? 14 HELX_P HELX_P7 7 ALA A 145 ? GLY A 150 ? ALA A 125 GLY A 130 1 ? 6 HELX_P HELX_P8 8 GLY A 150 ? ALA A 155 ? GLY A 130 ALA A 135 1 ? 6 HELX_P HELX_P9 9 GLY A 164 ? GLY A 181 ? GLY A 144 GLY A 161 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 114 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 94 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 115 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 95 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.93 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 74 ? ASN A 77 ? THR A 54 ASN A 57 A 2 SER A 35 ? GLY A 39 ? SER A 15 GLY A 19 A 3 VAL A 107 ? ALA A 110 ? VAL A 87 ALA A 90 A 4 MET A 134 ? GLU A 139 ? MET A 114 GLU A 119 A 5 VAL A 157 ? PHE A 162 ? VAL A 137 PHE A 142 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 76 ? O TYR A 56 N VAL A 36 ? N VAL A 16 A 2 3 N PHE A 37 ? N PHE A 17 O VAL A 109 ? O VAL A 89 A 3 4 N PHE A 108 ? N PHE A 88 O VAL A 135 ? O VAL A 115 A 4 5 N LEU A 136 ? N LEU A 116 O LEU A 160 ? O LEU A 140 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 5HM _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 20 _struct_site.details 'BINDING SITE FOR RESIDUE 5HM A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 GLY A 39 ? GLY A 19 . ? 1_555 ? 2 AC1 20 GLY A 40 ? GLY A 20 . ? 1_555 ? 3 AC1 20 PRO A 41 ? PRO A 21 . ? 1_555 ? 4 AC1 20 PHE A 42 ? PHE A 22 . ? 1_555 ? 5 AC1 20 ARG A 43 ? ARG A 23 . ? 1_555 ? 6 AC1 20 ALA A 78 ? ALA A 58 . ? 1_555 ? 7 AC1 20 GLU A 82 ? GLU A 62 . ? 1_555 ? 8 AC1 20 PHE A 88 ? PHE A 68 . ? 1_555 ? 9 AC1 20 ASP A 98 ? ASP A 78 . ? 1_555 ? 10 AC1 20 SER A 117 ? SER A 97 . ? 1_555 ? 11 AC1 20 PRO A 118 ? PRO A 98 . ? 1_555 ? 12 AC1 20 GLY A 119 ? GLY A 99 . ? 1_555 ? 13 AC1 20 THR A 120 ? THR A 100 . ? 1_555 ? 14 AC1 20 PHE A 146 ? PHE A 126 . ? 4_555 ? 15 AC1 20 LEU A 147 ? LEU A 127 . ? 4_555 ? 16 AC1 20 HOH C . ? HOH A 303 . ? 1_555 ? 17 AC1 20 HOH C . ? HOH A 305 . ? 1_555 ? 18 AC1 20 HOH C . ? HOH A 306 . ? 1_555 ? 19 AC1 20 HOH C . ? HOH A 312 . ? 1_555 ? 20 AC1 20 HOH C . ? HOH A 317 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 22 ? ? -138.78 -76.12 2 1 PHE A 22 ? ? -138.78 -77.22 3 1 ASN A 39 ? ? -26.82 -66.19 4 1 GLU A 67 ? ? -107.48 62.19 5 1 SER A 133 ? ? 82.11 -57.00 6 1 ILE A 169 ? ? 80.55 -33.32 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 326 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.250 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 9244 _diffrn_reflns.pdbx_Rmerge_I_obs 0.143 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.00 _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy 13.30 _diffrn_reflns.pdbx_percent_possible_obs 98.40 _diffrn_reflns.number 122549 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.85 50.00 ? ? 0.084 ? 0.999 13.30 99.70 1 3.85 4.85 ? ? 0.096 ? 0.998 12.90 94.50 1 3.36 3.85 ? ? 0.160 ? 0.995 11.50 96.80 1 3.05 3.36 ? ? 0.112 ? 0.997 14.40 100.00 1 2.83 3.05 ? ? 0.141 ? 0.992 14.50 100.00 1 2.67 2.83 ? ? 0.201 ? 0.993 14.50 100.00 1 2.53 2.67 ? ? 0.313 ? 1.007 14.30 100.00 1 2.42 2.53 ? ? 0.286 ? 1.007 14.00 100.00 1 2.33 2.42 ? ? 0.337 ? 0.992 12.70 99.80 1 2.25 2.33 ? ? 0.503 ? 1.005 10.40 93.60 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MET 1 ? A MET 21 22 1 Y 1 A THR 2 ? A THR 22 23 1 Y 1 A THR 3 ? A THR 23 24 1 Y 1 A THR 4 ? A THR 24 25 1 Y 1 A PRO 5 ? A PRO 25 26 1 Y 1 A LYS 6 ? A LYS 26 27 1 Y 1 A PRO 7 ? A PRO 27 28 1 Y 1 A ARG 8 ? A ARG 28 29 1 Y 1 A THR 9 ? A THR 29 30 1 Y 1 A ALA 10 ? A ALA 30 31 1 Y 1 A PRO 11 ? A PRO 31 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5HM OP3 O N N 1 5HM P P N N 2 5HM OP1 O N N 3 5HM OP2 O N N 4 5HM "O5'" O N N 5 5HM "C5'" C N N 6 5HM "C4'" C N R 7 5HM "O4'" O N N 8 5HM "C3'" C N S 9 5HM "O3'" O N N 10 5HM "C2'" C N R 11 5HM "O2'" O N N 12 5HM "C1'" C N R 13 5HM N1 N N N 14 5HM C2 C N N 15 5HM O2 O N N 16 5HM C6 C N N 17 5HM C5 C N N 18 5HM CM5 C N N 19 5HM OM5 O N N 20 5HM C4 C N N 21 5HM N3 N N N 22 5HM N4 N N N 23 5HM H1 H N N 24 5HM H2 H N N 25 5HM H3 H N N 26 5HM H4 H N N 27 5HM H5 H N N 28 5HM H6 H N N 29 5HM "HO3'" H N N 30 5HM H8 H N N 31 5HM H9 H N N 32 5HM H10 H N N 33 5HM H11 H N N 34 5HM H12 H N N 35 5HM H13 H N N 36 5HM H14 H N N 37 5HM H15 H N N 38 5HM H16 H N N 39 ALA N N N N 40 ALA CA C N S 41 ALA C C N N 42 ALA O O N N 43 ALA CB C N N 44 ALA OXT O N N 45 ALA H H N N 46 ALA H2 H N N 47 ALA HA H N N 48 ALA HB1 H N N 49 ALA HB2 H N N 50 ALA HB3 H N N 51 ALA HXT H N N 52 ARG N N N N 53 ARG CA C N S 54 ARG C C N N 55 ARG O O N N 56 ARG CB C N N 57 ARG CG C N N 58 ARG CD C N N 59 ARG NE N N N 60 ARG CZ C N N 61 ARG NH1 N N N 62 ARG NH2 N N N 63 ARG OXT O N N 64 ARG H H N N 65 ARG H2 H N N 66 ARG HA H N N 67 ARG HB2 H N N 68 ARG HB3 H N N 69 ARG HG2 H N N 70 ARG HG3 H N N 71 ARG HD2 H N N 72 ARG HD3 H N N 73 ARG HE H N N 74 ARG HH11 H N N 75 ARG HH12 H N N 76 ARG HH21 H N N 77 ARG HH22 H N N 78 ARG HXT H N N 79 ASN N N N N 80 ASN CA C N S 81 ASN C C N N 82 ASN O O N N 83 ASN CB C N N 84 ASN CG C N N 85 ASN OD1 O N N 86 ASN ND2 N N N 87 ASN OXT O N N 88 ASN H H N N 89 ASN H2 H N N 90 ASN HA H N N 91 ASN HB2 H N N 92 ASN HB3 H N N 93 ASN HD21 H N N 94 ASN HD22 H N N 95 ASN HXT H N N 96 ASP N N N N 97 ASP CA C N S 98 ASP C C N N 99 ASP O O N N 100 ASP CB C N N 101 ASP CG C N N 102 ASP OD1 O N N 103 ASP OD2 O N N 104 ASP OXT O N N 105 ASP H H N N 106 ASP H2 H N N 107 ASP HA H N N 108 ASP HB2 H N N 109 ASP HB3 H N N 110 ASP HD2 H N N 111 ASP HXT H N N 112 GLN N N N N 113 GLN CA C N S 114 GLN C C N N 115 GLN O O N N 116 GLN CB C N N 117 GLN CG C N N 118 GLN CD C N N 119 GLN OE1 O N N 120 GLN NE2 N N N 121 GLN OXT O N N 122 GLN H H N N 123 GLN H2 H N N 124 GLN HA H N N 125 GLN HB2 H N N 126 GLN HB3 H N N 127 GLN HG2 H N N 128 GLN HG3 H N N 129 GLN HE21 H N N 130 GLN HE22 H N N 131 GLN HXT H N N 132 GLU N N N N 133 GLU CA C N S 134 GLU C C N N 135 GLU O O N N 136 GLU CB C N N 137 GLU CG C N N 138 GLU CD C N N 139 GLU OE1 O N N 140 GLU OE2 O N N 141 GLU OXT O N N 142 GLU H H N N 143 GLU H2 H N N 144 GLU HA H N N 145 GLU HB2 H N N 146 GLU HB3 H N N 147 GLU HG2 H N N 148 GLU HG3 H N N 149 GLU HE2 H N N 150 GLU HXT H N N 151 GLY N N N N 152 GLY CA C N N 153 GLY C C N N 154 GLY O O N N 155 GLY OXT O N N 156 GLY H H N N 157 GLY H2 H N N 158 GLY HA2 H N N 159 GLY HA3 H N N 160 GLY HXT H N N 161 HIS N N N N 162 HIS CA C N S 163 HIS C C N N 164 HIS O O N N 165 HIS CB C N N 166 HIS CG C Y N 167 HIS ND1 N Y N 168 HIS CD2 C Y N 169 HIS CE1 C Y N 170 HIS NE2 N Y N 171 HIS OXT O N N 172 HIS H H N N 173 HIS H2 H N N 174 HIS HA H N N 175 HIS HB2 H N N 176 HIS HB3 H N N 177 HIS HD1 H N N 178 HIS HD2 H N N 179 HIS HE1 H N N 180 HIS HE2 H N N 181 HIS HXT H N N 182 HOH O O N N 183 HOH H1 H N N 184 HOH H2 H N N 185 ILE N N N N 186 ILE CA C N S 187 ILE C C N N 188 ILE O O N N 189 ILE CB C N S 190 ILE CG1 C N N 191 ILE CG2 C N N 192 ILE CD1 C N N 193 ILE OXT O N N 194 ILE H H N N 195 ILE H2 H N N 196 ILE HA H N N 197 ILE HB H N N 198 ILE HG12 H N N 199 ILE HG13 H N N 200 ILE HG21 H N N 201 ILE HG22 H N N 202 ILE HG23 H N N 203 ILE HD11 H N N 204 ILE HD12 H N N 205 ILE HD13 H N N 206 ILE HXT H N N 207 LEU N N N N 208 LEU CA C N S 209 LEU C C N N 210 LEU O O N N 211 LEU CB C N N 212 LEU CG C N N 213 LEU CD1 C N N 214 LEU CD2 C N N 215 LEU OXT O N N 216 LEU H H N N 217 LEU H2 H N N 218 LEU HA H N N 219 LEU HB2 H N N 220 LEU HB3 H N N 221 LEU HG H N N 222 LEU HD11 H N N 223 LEU HD12 H N N 224 LEU HD13 H N N 225 LEU HD21 H N N 226 LEU HD22 H N N 227 LEU HD23 H N N 228 LEU HXT H N N 229 LYS N N N N 230 LYS CA C N S 231 LYS C C N N 232 LYS O O N N 233 LYS CB C N N 234 LYS CG C N N 235 LYS CD C N N 236 LYS CE C N N 237 LYS NZ N N N 238 LYS OXT O N N 239 LYS H H N N 240 LYS H2 H N N 241 LYS HA H N N 242 LYS HB2 H N N 243 LYS HB3 H N N 244 LYS HG2 H N N 245 LYS HG3 H N N 246 LYS HD2 H N N 247 LYS HD3 H N N 248 LYS HE2 H N N 249 LYS HE3 H N N 250 LYS HZ1 H N N 251 LYS HZ2 H N N 252 LYS HZ3 H N N 253 LYS HXT H N N 254 MET N N N N 255 MET CA C N S 256 MET C C N N 257 MET O O N N 258 MET CB C N N 259 MET CG C N N 260 MET SD S N N 261 MET CE C N N 262 MET OXT O N N 263 MET H H N N 264 MET H2 H N N 265 MET HA H N N 266 MET HB2 H N N 267 MET HB3 H N N 268 MET HG2 H N N 269 MET HG3 H N N 270 MET HE1 H N N 271 MET HE2 H N N 272 MET HE3 H N N 273 MET HXT H N N 274 PHE N N N N 275 PHE CA C N S 276 PHE C C N N 277 PHE O O N N 278 PHE CB C N N 279 PHE CG C Y N 280 PHE CD1 C Y N 281 PHE CD2 C Y N 282 PHE CE1 C Y N 283 PHE CE2 C Y N 284 PHE CZ C Y N 285 PHE OXT O N N 286 PHE H H N N 287 PHE H2 H N N 288 PHE HA H N N 289 PHE HB2 H N N 290 PHE HB3 H N N 291 PHE HD1 H N N 292 PHE HD2 H N N 293 PHE HE1 H N N 294 PHE HE2 H N N 295 PHE HZ H N N 296 PHE HXT H N N 297 PRO N N N N 298 PRO CA C N S 299 PRO C C N N 300 PRO O O N N 301 PRO CB C N N 302 PRO CG C N N 303 PRO CD C N N 304 PRO OXT O N N 305 PRO H H N N 306 PRO HA H N N 307 PRO HB2 H N N 308 PRO HB3 H N N 309 PRO HG2 H N N 310 PRO HG3 H N N 311 PRO HD2 H N N 312 PRO HD3 H N N 313 PRO HXT H N N 314 SER N N N N 315 SER CA C N S 316 SER C C N N 317 SER O O N N 318 SER CB C N N 319 SER OG O N N 320 SER OXT O N N 321 SER H H N N 322 SER H2 H N N 323 SER HA H N N 324 SER HB2 H N N 325 SER HB3 H N N 326 SER HG H N N 327 SER HXT H N N 328 THR N N N N 329 THR CA C N S 330 THR C C N N 331 THR O O N N 332 THR CB C N R 333 THR OG1 O N N 334 THR CG2 C N N 335 THR OXT O N N 336 THR H H N N 337 THR H2 H N N 338 THR HA H N N 339 THR HB H N N 340 THR HG1 H N N 341 THR HG21 H N N 342 THR HG22 H N N 343 THR HG23 H N N 344 THR HXT H N N 345 TRP N N N N 346 TRP CA C N S 347 TRP C C N N 348 TRP O O N N 349 TRP CB C N N 350 TRP CG C Y N 351 TRP CD1 C Y N 352 TRP CD2 C Y N 353 TRP NE1 N Y N 354 TRP CE2 C Y N 355 TRP CE3 C Y N 356 TRP CZ2 C Y N 357 TRP CZ3 C Y N 358 TRP CH2 C Y N 359 TRP OXT O N N 360 TRP H H N N 361 TRP H2 H N N 362 TRP HA H N N 363 TRP HB2 H N N 364 TRP HB3 H N N 365 TRP HD1 H N N 366 TRP HE1 H N N 367 TRP HE3 H N N 368 TRP HZ2 H N N 369 TRP HZ3 H N N 370 TRP HH2 H N N 371 TRP HXT H N N 372 TYR N N N N 373 TYR CA C N S 374 TYR C C N N 375 TYR O O N N 376 TYR CB C N N 377 TYR CG C Y N 378 TYR CD1 C Y N 379 TYR CD2 C Y N 380 TYR CE1 C Y N 381 TYR CE2 C Y N 382 TYR CZ C Y N 383 TYR OH O N N 384 TYR OXT O N N 385 TYR H H N N 386 TYR H2 H N N 387 TYR HA H N N 388 TYR HB2 H N N 389 TYR HB3 H N N 390 TYR HD1 H N N 391 TYR HD2 H N N 392 TYR HE1 H N N 393 TYR HE2 H N N 394 TYR HH H N N 395 TYR HXT H N N 396 VAL N N N N 397 VAL CA C N S 398 VAL C C N N 399 VAL O O N N 400 VAL CB C N N 401 VAL CG1 C N N 402 VAL CG2 C N N 403 VAL OXT O N N 404 VAL H H N N 405 VAL H2 H N N 406 VAL HA H N N 407 VAL HB H N N 408 VAL HG11 H N N 409 VAL HG12 H N N 410 VAL HG13 H N N 411 VAL HG21 H N N 412 VAL HG22 H N N 413 VAL HG23 H N N 414 VAL HXT H N N 415 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5HM N4 C4 sing N N 1 5HM C4 N3 doub N N 2 5HM C4 C5 sing N N 3 5HM N3 C2 sing N N 4 5HM CM5 OM5 sing N N 5 5HM CM5 C5 sing N N 6 5HM C5 C6 doub N N 7 5HM C2 O2 doub N N 8 5HM C2 N1 sing N N 9 5HM C6 N1 sing N N 10 5HM N1 "C1'" sing N N 11 5HM OP1 P doub N N 12 5HM "C1'" "O4'" sing N N 13 5HM "C1'" "C2'" sing N N 14 5HM OP2 P sing N N 15 5HM "O4'" "C4'" sing N N 16 5HM "C2'" "O2'" sing N N 17 5HM "C2'" "C3'" sing N N 18 5HM P "O5'" sing N N 19 5HM P OP3 sing N N 20 5HM "O5'" "C5'" sing N N 21 5HM "C5'" "C4'" sing N N 22 5HM "C4'" "C3'" sing N N 23 5HM "C3'" "O3'" sing N N 24 5HM OP3 H1 sing N N 25 5HM OP2 H2 sing N N 26 5HM "C5'" H3 sing N N 27 5HM "C5'" H4 sing N N 28 5HM "C4'" H5 sing N N 29 5HM "C3'" H6 sing N N 30 5HM "O3'" "HO3'" sing N N 31 5HM "C2'" H8 sing N N 32 5HM "O2'" H9 sing N N 33 5HM "C1'" H10 sing N N 34 5HM C6 H11 sing N N 35 5HM CM5 H12 sing N N 36 5HM CM5 H13 sing N N 37 5HM OM5 H14 sing N N 38 5HM N4 H15 sing N N 39 5HM N4 H16 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 GLN N CA sing N N 110 GLN N H sing N N 111 GLN N H2 sing N N 112 GLN CA C sing N N 113 GLN CA CB sing N N 114 GLN CA HA sing N N 115 GLN C O doub N N 116 GLN C OXT sing N N 117 GLN CB CG sing N N 118 GLN CB HB2 sing N N 119 GLN CB HB3 sing N N 120 GLN CG CD sing N N 121 GLN CG HG2 sing N N 122 GLN CG HG3 sing N N 123 GLN CD OE1 doub N N 124 GLN CD NE2 sing N N 125 GLN NE2 HE21 sing N N 126 GLN NE2 HE22 sing N N 127 GLN OXT HXT sing N N 128 GLU N CA sing N N 129 GLU N H sing N N 130 GLU N H2 sing N N 131 GLU CA C sing N N 132 GLU CA CB sing N N 133 GLU CA HA sing N N 134 GLU C O doub N N 135 GLU C OXT sing N N 136 GLU CB CG sing N N 137 GLU CB HB2 sing N N 138 GLU CB HB3 sing N N 139 GLU CG CD sing N N 140 GLU CG HG2 sing N N 141 GLU CG HG3 sing N N 142 GLU CD OE1 doub N N 143 GLU CD OE2 sing N N 144 GLU OE2 HE2 sing N N 145 GLU OXT HXT sing N N 146 GLY N CA sing N N 147 GLY N H sing N N 148 GLY N H2 sing N N 149 GLY CA C sing N N 150 GLY CA HA2 sing N N 151 GLY CA HA3 sing N N 152 GLY C O doub N N 153 GLY C OXT sing N N 154 GLY OXT HXT sing N N 155 HIS N CA sing N N 156 HIS N H sing N N 157 HIS N H2 sing N N 158 HIS CA C sing N N 159 HIS CA CB sing N N 160 HIS CA HA sing N N 161 HIS C O doub N N 162 HIS C OXT sing N N 163 HIS CB CG sing N N 164 HIS CB HB2 sing N N 165 HIS CB HB3 sing N N 166 HIS CG ND1 sing Y N 167 HIS CG CD2 doub Y N 168 HIS ND1 CE1 doub Y N 169 HIS ND1 HD1 sing N N 170 HIS CD2 NE2 sing Y N 171 HIS CD2 HD2 sing N N 172 HIS CE1 NE2 sing Y N 173 HIS CE1 HE1 sing N N 174 HIS NE2 HE2 sing N N 175 HIS OXT HXT sing N N 176 HOH O H1 sing N N 177 HOH O H2 sing N N 178 ILE N CA sing N N 179 ILE N H sing N N 180 ILE N H2 sing N N 181 ILE CA C sing N N 182 ILE CA CB sing N N 183 ILE CA HA sing N N 184 ILE C O doub N N 185 ILE C OXT sing N N 186 ILE CB CG1 sing N N 187 ILE CB CG2 sing N N 188 ILE CB HB sing N N 189 ILE CG1 CD1 sing N N 190 ILE CG1 HG12 sing N N 191 ILE CG1 HG13 sing N N 192 ILE CG2 HG21 sing N N 193 ILE CG2 HG22 sing N N 194 ILE CG2 HG23 sing N N 195 ILE CD1 HD11 sing N N 196 ILE CD1 HD12 sing N N 197 ILE CD1 HD13 sing N N 198 ILE OXT HXT sing N N 199 LEU N CA sing N N 200 LEU N H sing N N 201 LEU N H2 sing N N 202 LEU CA C sing N N 203 LEU CA CB sing N N 204 LEU CA HA sing N N 205 LEU C O doub N N 206 LEU C OXT sing N N 207 LEU CB CG sing N N 208 LEU CB HB2 sing N N 209 LEU CB HB3 sing N N 210 LEU CG CD1 sing N N 211 LEU CG CD2 sing N N 212 LEU CG HG sing N N 213 LEU CD1 HD11 sing N N 214 LEU CD1 HD12 sing N N 215 LEU CD1 HD13 sing N N 216 LEU CD2 HD21 sing N N 217 LEU CD2 HD22 sing N N 218 LEU CD2 HD23 sing N N 219 LEU OXT HXT sing N N 220 LYS N CA sing N N 221 LYS N H sing N N 222 LYS N H2 sing N N 223 LYS CA C sing N N 224 LYS CA CB sing N N 225 LYS CA HA sing N N 226 LYS C O doub N N 227 LYS C OXT sing N N 228 LYS CB CG sing N N 229 LYS CB HB2 sing N N 230 LYS CB HB3 sing N N 231 LYS CG CD sing N N 232 LYS CG HG2 sing N N 233 LYS CG HG3 sing N N 234 LYS CD CE sing N N 235 LYS CD HD2 sing N N 236 LYS CD HD3 sing N N 237 LYS CE NZ sing N N 238 LYS CE HE2 sing N N 239 LYS CE HE3 sing N N 240 LYS NZ HZ1 sing N N 241 LYS NZ HZ2 sing N N 242 LYS NZ HZ3 sing N N 243 LYS OXT HXT sing N N 244 MET N CA sing N N 245 MET N H sing N N 246 MET N H2 sing N N 247 MET CA C sing N N 248 MET CA CB sing N N 249 MET CA HA sing N N 250 MET C O doub N N 251 MET C OXT sing N N 252 MET CB CG sing N N 253 MET CB HB2 sing N N 254 MET CB HB3 sing N N 255 MET CG SD sing N N 256 MET CG HG2 sing N N 257 MET CG HG3 sing N N 258 MET SD CE sing N N 259 MET CE HE1 sing N N 260 MET CE HE2 sing N N 261 MET CE HE3 sing N N 262 MET OXT HXT sing N N 263 PHE N CA sing N N 264 PHE N H sing N N 265 PHE N H2 sing N N 266 PHE CA C sing N N 267 PHE CA CB sing N N 268 PHE CA HA sing N N 269 PHE C O doub N N 270 PHE C OXT sing N N 271 PHE CB CG sing N N 272 PHE CB HB2 sing N N 273 PHE CB HB3 sing N N 274 PHE CG CD1 doub Y N 275 PHE CG CD2 sing Y N 276 PHE CD1 CE1 sing Y N 277 PHE CD1 HD1 sing N N 278 PHE CD2 CE2 doub Y N 279 PHE CD2 HD2 sing N N 280 PHE CE1 CZ doub Y N 281 PHE CE1 HE1 sing N N 282 PHE CE2 CZ sing Y N 283 PHE CE2 HE2 sing N N 284 PHE CZ HZ sing N N 285 PHE OXT HXT sing N N 286 PRO N CA sing N N 287 PRO N CD sing N N 288 PRO N H sing N N 289 PRO CA C sing N N 290 PRO CA CB sing N N 291 PRO CA HA sing N N 292 PRO C O doub N N 293 PRO C OXT sing N N 294 PRO CB CG sing N N 295 PRO CB HB2 sing N N 296 PRO CB HB3 sing N N 297 PRO CG CD sing N N 298 PRO CG HG2 sing N N 299 PRO CG HG3 sing N N 300 PRO CD HD2 sing N N 301 PRO CD HD3 sing N N 302 PRO OXT HXT sing N N 303 SER N CA sing N N 304 SER N H sing N N 305 SER N H2 sing N N 306 SER CA C sing N N 307 SER CA CB sing N N 308 SER CA HA sing N N 309 SER C O doub N N 310 SER C OXT sing N N 311 SER CB OG sing N N 312 SER CB HB2 sing N N 313 SER CB HB3 sing N N 314 SER OG HG sing N N 315 SER OXT HXT sing N N 316 THR N CA sing N N 317 THR N H sing N N 318 THR N H2 sing N N 319 THR CA C sing N N 320 THR CA CB sing N N 321 THR CA HA sing N N 322 THR C O doub N N 323 THR C OXT sing N N 324 THR CB OG1 sing N N 325 THR CB CG2 sing N N 326 THR CB HB sing N N 327 THR OG1 HG1 sing N N 328 THR CG2 HG21 sing N N 329 THR CG2 HG22 sing N N 330 THR CG2 HG23 sing N N 331 THR OXT HXT sing N N 332 TRP N CA sing N N 333 TRP N H sing N N 334 TRP N H2 sing N N 335 TRP CA C sing N N 336 TRP CA CB sing N N 337 TRP CA HA sing N N 338 TRP C O doub N N 339 TRP C OXT sing N N 340 TRP CB CG sing N N 341 TRP CB HB2 sing N N 342 TRP CB HB3 sing N N 343 TRP CG CD1 doub Y N 344 TRP CG CD2 sing Y N 345 TRP CD1 NE1 sing Y N 346 TRP CD1 HD1 sing N N 347 TRP CD2 CE2 doub Y N 348 TRP CD2 CE3 sing Y N 349 TRP NE1 CE2 sing Y N 350 TRP NE1 HE1 sing N N 351 TRP CE2 CZ2 sing Y N 352 TRP CE3 CZ3 doub Y N 353 TRP CE3 HE3 sing N N 354 TRP CZ2 CH2 doub Y N 355 TRP CZ2 HZ2 sing N N 356 TRP CZ3 CH2 sing Y N 357 TRP CZ3 HZ3 sing N N 358 TRP CH2 HH2 sing N N 359 TRP OXT HXT sing N N 360 TYR N CA sing N N 361 TYR N H sing N N 362 TYR N H2 sing N N 363 TYR CA C sing N N 364 TYR CA CB sing N N 365 TYR CA HA sing N N 366 TYR C O doub N N 367 TYR C OXT sing N N 368 TYR CB CG sing N N 369 TYR CB HB2 sing N N 370 TYR CB HB3 sing N N 371 TYR CG CD1 doub Y N 372 TYR CG CD2 sing Y N 373 TYR CD1 CE1 sing Y N 374 TYR CD1 HD1 sing N N 375 TYR CD2 CE2 doub Y N 376 TYR CD2 HD2 sing N N 377 TYR CE1 CZ doub Y N 378 TYR CE1 HE1 sing N N 379 TYR CE2 CZ sing Y N 380 TYR CE2 HE2 sing N N 381 TYR CZ OH sing N N 382 TYR OH HH sing N N 383 TYR OXT HXT sing N N 384 VAL N CA sing N N 385 VAL N H sing N N 386 VAL N H2 sing N N 387 VAL CA C sing N N 388 VAL CA CB sing N N 389 VAL CA HA sing N N 390 VAL C O doub N N 391 VAL C OXT sing N N 392 VAL CB CG1 sing N N 393 VAL CB CG2 sing N N 394 VAL CB HB sing N N 395 VAL CG1 HG11 sing N N 396 VAL CG1 HG12 sing N N 397 VAL CG1 HG13 sing N N 398 VAL CG2 HG21 sing N N 399 VAL CG2 HG22 sing N N 400 VAL CG2 HG23 sing N N 401 VAL OXT HXT sing N N 402 # _atom_sites.entry_id 4OHB _atom_sites.fract_transf_matrix[1][1] 0.022014 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009822 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012233 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_