HEADER MEMBRANE PROTEIN 21-JAN-14 4OJC TITLE CRYSTAL STRUCTURE OF THE WILD-TYPE FULL-LENGTH TRIMERIC ECTODOMAIN OF TITLE 2 THE C. ELEGANS FUSION PROTEIN EFF-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EFF-1A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 23-561; COMPND 5 SYNONYM: PROTEIN EFF-1, ISOFORM A; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_COMMON: NEMATODE; SOURCE 4 ORGANISM_TAXID: 6239; SOURCE 5 GENE: C26D10.5, CELE_C26D10.5, EFF-1; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 EXPRESSION_SYSTEM_CELL: S2 CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMT-BASED KEYWDS CLASS II FUSION PROTEIN, MEMBRANE FUSION PROTEIN, CELL SURFACE, KEYWDS 2 MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.KREY,F.A.REY REVDAT 2 29-JUL-20 4OJC 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 14-MAY-14 4OJC 0 JRNL AUTH J.PEREZ-VARGAS,T.KREY,C.VALANSI,O.AVINOAM,A.HAOUZ,M.JAMIN, JRNL AUTH 2 H.RAVEH-BARAK,B.PODBILEWICZ,F.A.REY JRNL TITL STRUCTURAL BASIS OF EUKARYOTIC CELL-CELL FUSION JRNL REF CELL(CAMBRIDGE,MASS.) V. 157 407 2014 JRNL REFN ISSN 0092-8674 JRNL PMID 24725407 JRNL DOI 10.1016/J.CELL.2014.02.020 REMARK 2 REMARK 2 RESOLUTION. 2.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.42 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 17553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 906 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.93 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.11 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.87 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2514 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3147 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2374 REMARK 3 BIN R VALUE (WORKING SET) : 0.3102 REMARK 3 BIN FREE R VALUE : 0.3892 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.57 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 140 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3639 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 115 REMARK 3 SOLVENT ATOMS : 19 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 113.4 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.549 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.814 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.887 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3833 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5195 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1296 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 93 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 560 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3833 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 528 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4121 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.34 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.97 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.88 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OJC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000084565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03960 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18417 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.930 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% 2-PROPANOL, 50MM SODIUM CITRATE, REMARK 280 0.8-1.2M AMMONIUM SULFATE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.84900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 86.84900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.84900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 86.84900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 86.84900 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 86.84900 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 86.84900 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 86.84900 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 86.84900 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 86.84900 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 86.84900 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 86.84900 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 86.84900 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 86.84900 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 86.84900 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 86.84900 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 86.84900 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 86.84900 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 86.84900 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 86.84900 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 86.84900 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 86.84900 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 86.84900 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 86.84900 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 86.84900 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 27780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -366.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A1106 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 21 REMARK 465 SER A 22 REMARK 465 PHE A 23 REMARK 465 PRO A 24 REMARK 465 LEU A 25 REMARK 465 GLU A 26 REMARK 465 GLU A 27 REMARK 465 LYS A 28 REMARK 465 PHE A 29 REMARK 465 ASP A 30 REMARK 465 GLY A 31 REMARK 465 LEU A 32 REMARK 465 PHE A 33 REMARK 465 SER A 57 REMARK 465 ILE A 58 REMARK 465 ALA A 59 REMARK 465 GLU A 80 REMARK 465 ASP A 81 REMARK 465 THR A 82 REMARK 465 GLN A 83 REMARK 465 LEU A 84 REMARK 465 ALA A 85 REMARK 465 SER A 86 REMARK 465 GLN A 87 REMARK 465 GLU A 88 REMARK 465 ILE A 89 REMARK 465 ASN A 90 REMARK 465 ASP A 91 REMARK 465 ASP A 92 REMARK 465 GLU A 93 REMARK 465 ASN A 94 REMARK 465 ALA A 95 REMARK 465 GLY A 96 REMARK 465 ASN A 97 REMARK 465 GLN A 98 REMARK 465 THR A 99 REMARK 465 SER A 100 REMARK 465 GLY A 278 REMARK 465 GLY A 279 REMARK 465 ASP A 393 REMARK 465 ASP A 394 REMARK 465 GLU A 395 REMARK 465 VAL A 396 REMARK 465 GLU A 510 REMARK 465 ILE A 511 REMARK 465 ASP A 512 REMARK 465 LEU A 513 REMARK 465 VAL A 514 REMARK 465 GLU A 515 REMARK 465 GLY A 516 REMARK 465 LYS A 517 REMARK 465 TRP A 518 REMARK 465 HIS A 519 REMARK 465 GLU A 520 REMARK 465 MET A 521 REMARK 465 ILE A 522 REMARK 465 GLY A 523 REMARK 465 THR A 524 REMARK 465 CYS A 525 REMARK 465 PRO A 526 REMARK 465 THR A 527 REMARK 465 CYS A 528 REMARK 465 ASN A 529 REMARK 465 GLN A 530 REMARK 465 ILE A 531 REMARK 465 ASN A 532 REMARK 465 PHE A 533 REMARK 465 ASN A 534 REMARK 465 GLY A 535 REMARK 465 MET A 536 REMARK 465 MET A 537 REMARK 465 LYS A 538 REMARK 465 PHE A 539 REMARK 465 LEU A 540 REMARK 465 ASN A 541 REMARK 465 PRO A 542 REMARK 465 ALA A 543 REMARK 465 HIS A 544 REMARK 465 TRP A 545 REMARK 465 ASP A 561 REMARK 465 GLY A 562 REMARK 465 PRO A 563 REMARK 465 PHE A 564 REMARK 465 GLU A 565 REMARK 465 ASP A 566 REMARK 465 ASP A 567 REMARK 465 ASP A 568 REMARK 465 ASP A 569 REMARK 465 LYS A 570 REMARK 465 ALA A 571 REMARK 465 GLY A 572 REMARK 465 TRP A 573 REMARK 465 SER A 574 REMARK 465 HIS A 575 REMARK 465 PRO A 576 REMARK 465 GLN A 577 REMARK 465 PHE A 578 REMARK 465 GLU A 579 REMARK 465 LYS A 580 REMARK 465 GLY A 581 REMARK 465 GLY A 582 REMARK 465 GLY A 583 REMARK 465 SER A 584 REMARK 465 GLY A 585 REMARK 465 GLY A 586 REMARK 465 GLY A 587 REMARK 465 SER A 588 REMARK 465 GLY A 589 REMARK 465 GLY A 590 REMARK 465 GLY A 591 REMARK 465 SER A 592 REMARK 465 TRP A 593 REMARK 465 SER A 594 REMARK 465 HIS A 595 REMARK 465 PRO A 596 REMARK 465 GLN A 597 REMARK 465 PHE A 598 REMARK 465 GLU A 599 REMARK 465 LYS A 600 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 55 -156.95 -165.53 REMARK 500 TYR A 120 133.66 -170.24 REMARK 500 SER A 139 146.39 -39.82 REMARK 500 CYS A 142 84.62 70.65 REMARK 500 GLU A 154 125.02 -37.72 REMARK 500 ASP A 156 -33.80 72.55 REMARK 500 SER A 158 151.03 -49.54 REMARK 500 GLU A 179 -25.08 -39.77 REMARK 500 GLN A 206 122.67 -36.75 REMARK 500 ASN A 222 78.76 57.36 REMARK 500 LYS A 228 -73.87 -76.20 REMARK 500 SER A 276 50.99 -105.57 REMARK 500 THR A 281 156.71 -48.19 REMARK 500 ASP A 307 -53.40 -24.67 REMARK 500 ASN A 330 113.94 -163.25 REMARK 500 GLN A 399 -153.39 -136.00 REMARK 500 ASP A 494 4.76 -64.00 REMARK 500 ILE A 552 -51.43 -23.80 REMARK 500 ALA A 559 -75.11 -75.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OJD RELATED DB: PDB REMARK 900 RELATED ID: 4OJE RELATED DB: PDB DBREF 4OJC A 23 561 UNP G5ECA1 G5ECA1_CAEEL 23 561 SEQADV 4OJC ARG A 21 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC SER A 22 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 562 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC PRO A 563 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC PHE A 564 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLU A 565 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC ASP A 566 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC ASP A 567 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC ASP A 568 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC ASP A 569 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC LYS A 570 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC ALA A 571 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 572 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC TRP A 573 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC SER A 574 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC HIS A 575 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC PRO A 576 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLN A 577 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC PHE A 578 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLU A 579 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC LYS A 580 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 581 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 582 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 583 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC SER A 584 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 585 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 586 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 587 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC SER A 588 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 589 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 590 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLY A 591 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC SER A 592 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC TRP A 593 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC SER A 594 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC HIS A 595 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC PRO A 596 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLN A 597 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC PHE A 598 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC GLU A 599 UNP G5ECA1 EXPRESSION TAG SEQADV 4OJC LYS A 600 UNP G5ECA1 EXPRESSION TAG SEQRES 1 A 580 ARG SER PHE PRO LEU GLU GLU LYS PHE ASP GLY LEU PHE SEQRES 2 A 580 ARG ALA GLU PRO PRO HIS CYS SER LYS THR PRO ILE VAL SEQRES 3 A 580 ARG ALA GLN THR SER GLN ASN ALA MET SER SER ILE ALA SEQRES 4 A 580 ARG GLY MET GLN MET GLN PHE SER ILE GLY LEU HIS THR SEQRES 5 A 580 ALA VAL CYS PHE ARG LEU TYR GLU ASP THR GLN LEU ALA SEQRES 6 A 580 SER GLN GLU ILE ASN ASP ASP GLU ASN ALA GLY ASN GLN SEQRES 7 A 580 THR SER LEU LEU HIS THR ILE ARG LEU GLU LYS LEU GLU SEQRES 8 A 580 HIS HIS HIS PRO ILE THR GLN ARG TYR THR PHE GLY ILE SEQRES 9 A 580 PRO GLU VAL HIS ALA SER CYS ILE CYS GLU CYS ASP ALA SEQRES 10 A 580 THR SER SER THR CYS THR ALA GLU SER HIS GLN PHE THR SEQRES 11 A 580 ALA CYS PRO GLU SER ASP LYS SER ASP GLU THR SER SER SEQRES 12 A 580 CYS TYR ARG THR PHE PHE PRO ASN GLN THR PRO ILE GLY SEQRES 13 A 580 CYS SER GLU ASP ASP ILE PRO LYS LEU CYS CYS ASP VAL SEQRES 14 A 580 ARG PHE LYS PRO TYR LYS ASN MET THR PHE LEU ALA VAL SEQRES 15 A 580 LYS LEU GLU GLN PRO THR THR TYR ALA THR PHE VAL TYR SEQRES 16 A 580 ALA ALA TYR ASP PHE VAL ASN GLY TYR TRP VAL GLU LYS SEQRES 17 A 580 ASP LYS THR LYS ILE ARG SER GLN LEU ASP GLY GLY THR SEQRES 18 A 580 GLN ASP ARG HIS LEU ASP GLN LYS ARG ARG ILE SER LEU SEQRES 19 A 580 ALA VAL THR ALA GLY GLY ARG ALA SER HIS GLN LEU GLU SEQRES 20 A 580 THR GLY MET TYR PHE SER ARG THR SER ASN GLY GLY GLU SEQRES 21 A 580 THR GLU GLU LEU ARG MET GLN PRO LEU ASN GLU ILE THR SEQRES 22 A 580 ASP ASN ASN PHE ASP ARG LEU GLY TRP TYR ARG MET ASP SEQRES 23 A 580 ASP SER GLY HIS PHE HIS VAL ASN ASN GLY VAL VAL LYS SEQRES 24 A 580 MET ASP ASP ILE HIS LYS ALA LYS VAL LYS ASN CYS LYS SEQRES 25 A 580 GLU GLN THR TYR LYS SER ILE LEU SER ALA ASN HIS TYR SEQRES 26 A 580 MET PRO GLY HIS PHE ASN LEU THR ARG PRO LEU GLU VAL SEQRES 27 A 580 ILE LYS PRO TRP ILE GLN SER ALA ARG ILE PHE ASP SER SEQRES 28 A 580 SER LEU ARG GLN ALA VAL VAL THR HIS ALA GLU GLY THR SEQRES 29 A 580 ASN LEU GLN ILE SER ILE HIS LEU ASP ASP GLU VAL GLU SEQRES 30 A 580 SER GLN ASN LEU VAL PHE PHE HIS ASN ALA SER ARG ILE SEQRES 31 A 580 ARG ASP PHE SER GLY SER ILE ILE VAL ASP SER LYS SER SEQRES 32 A 580 ASN ARG LEU PHE ASN LEU THR VAL TYR GLU ALA SER GLY SEQRES 33 A 580 LYS ILE ASP GLY SER VAL LYS MET SER THR GLY PHE GLY SEQRES 34 A 580 SER ASP THR ILE HIS THR PHE THR ALA TYR VAL SER ASP SEQRES 35 A 580 LEU HIS ALA SER ASN ARG SER MET ILE ILE PRO LEU PRO SEQRES 36 A 580 ALA ILE VAL GLY GLN GLY ALA ARG ALA ILE CYS LEU ARG SEQRES 37 A 580 ALA ASP SER MET ALA ASP ILE ASP LYS ILE CYS HIS VAL SEQRES 38 A 580 ILE GLU TYR PHE GLU SER PRO LEU GLU ILE ASP LEU VAL SEQRES 39 A 580 GLU GLY LYS TRP HIS GLU MET ILE GLY THR CYS PRO THR SEQRES 40 A 580 CYS ASN GLN ILE ASN PHE ASN GLY MET MET LYS PHE LEU SEQRES 41 A 580 ASN PRO ALA HIS TRP ILE LYS GLY ILE SER SER ILE GLY SEQRES 42 A 580 ASP GLY VAL MET ILE ALA THR ASP GLY PRO PHE GLU ASP SEQRES 43 A 580 ASP ASP ASP LYS ALA GLY TRP SER HIS PRO GLN PHE GLU SEQRES 44 A 580 LYS GLY GLY GLY SER GLY GLY GLY SER GLY GLY GLY SER SEQRES 45 A 580 TRP SER HIS PRO GLN PHE GLU LYS MODRES 4OJC ASN A 467 ASN GLYCOSYLATION SITE MODRES 4OJC ASN A 406 ASN GLYCOSYLATION SITE MODRES 4OJC ASN A 196 ASN GLYCOSYLATION SITE MODRES 4OJC ASN A 428 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET NAG A1103 14 HET NAG A1104 14 HET NAG A1105 14 HET SO4 A1106 5 HET SO4 A1107 5 HET SO4 A1108 5 HET SO4 A1109 5 HET SO4 A1110 5 HET SO4 A1111 5 HET SO4 A1112 5 HET SO4 A1113 5 HET SO4 A1114 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 6 SO4 9(O4 S 2-) FORMUL 15 HOH *19(H2 O) HELIX 1 1 THR A 143 GLN A 148 1 6 HELIX 2 2 ASN A 315 ILE A 323 1 9 HELIX 3 3 PRO A 355 LYS A 360 1 6 SHEET 1 A 5 VAL A 46 ALA A 48 0 SHEET 2 A 5 GLN A 63 ILE A 68 -1 O GLN A 65 N VAL A 46 SHEET 3 A 5 LEU A 386 HIS A 391 -1 O ILE A 388 N PHE A 66 SHEET 4 A 5 SER A 253 THR A 257 -1 N SER A 253 O HIS A 391 SHEET 5 A 5 GLN A 242 HIS A 245 -1 N ARG A 244 O LEU A 254 SHEET 1 B 5 TRP A 225 GLN A 236 0 SHEET 2 B 5 THR A 208 PHE A 220 -1 N PHE A 213 O ILE A 233 SHEET 3 B 5 LEU A 102 PHE A 122 -1 N GLU A 111 O TYR A 210 SHEET 4 B 5 GLN A 375 HIS A 380 -1 O HIS A 380 N LEU A 110 SHEET 5 B 5 ILE A 363 ILE A 368 -1 N ARG A 367 O VAL A 377 SHEET 1 C 5 GLY A 269 THR A 275 0 SHEET 2 C 5 THR A 198 LEU A 204 -1 N THR A 198 O THR A 275 SHEET 3 C 5 LEU A 102 PHE A 122 -1 N PHE A 122 O PHE A 199 SHEET 4 C 5 ALA A 73 LEU A 78 -1 N PHE A 76 O HIS A 103 SHEET 5 C 5 LEU A 401 PHE A 404 -1 O VAL A 402 N ARG A 77 SHEET 1 D 3 PRO A 125 SER A 130 0 SHEET 2 D 3 LYS A 184 PRO A 193 -1 O LYS A 192 N GLU A 126 SHEET 3 D 3 CYS A 133 GLU A 134 -1 N GLU A 134 O LYS A 184 SHEET 1 E 3 PRO A 125 SER A 130 0 SHEET 2 E 3 LYS A 184 PRO A 193 -1 O LYS A 192 N GLU A 126 SHEET 3 E 3 SER A 163 PRO A 170 -1 N TYR A 165 O VAL A 189 SHEET 1 F 2 TYR A 303 MET A 305 0 SHEET 2 F 2 PHE A 311 VAL A 313 -1 O HIS A 312 N ARG A 304 SHEET 1 G 3 HIS A 324 ASN A 330 0 SHEET 2 G 3 THR A 335 LEU A 340 -1 O THR A 335 N LYS A 329 SHEET 3 G 3 SER A 550 SER A 551 -1 O SER A 550 N TYR A 336 SHEET 1 H 7 ASP A 412 SER A 414 0 SHEET 2 H 7 ARG A 425 ALA A 434 -1 O TYR A 432 N ASP A 412 SHEET 3 H 7 SER A 416 VAL A 419 -1 N ILE A 418 O LEU A 426 SHEET 4 H 7 ILE A 498 GLU A 506 1 O GLU A 503 N ILE A 417 SHEET 5 H 7 ARG A 483 ALA A 489 -1 N ARG A 483 O ILE A 502 SHEET 6 H 7 GLY A 436 LYS A 443 -1 N LYS A 443 O ALA A 484 SHEET 7 H 7 THR A 452 VAL A 460 -1 O ALA A 458 N ILE A 438 SHEET 1 I 3 ASP A 412 SER A 414 0 SHEET 2 I 3 ARG A 425 ALA A 434 -1 O TYR A 432 N ASP A 412 SHEET 3 I 3 SER A 466 PRO A 473 -1 O MET A 470 N LEU A 429 SSBOND 1 CYS A 40 CYS A 75 1555 1555 2.02 SSBOND 2 CYS A 131 CYS A 187 1555 1555 2.04 SSBOND 3 CYS A 133 CYS A 331 1555 1555 2.04 SSBOND 4 CYS A 135 CYS A 177 1555 1555 2.03 SSBOND 5 CYS A 142 CYS A 186 1555 1555 2.04 SSBOND 6 CYS A 152 CYS A 164 1555 1555 2.04 SSBOND 7 CYS A 486 CYS A 499 1555 1555 2.05 LINK ND2 ASN A 196 C1 NAG A1105 1555 1555 1.44 LINK ND2 ASN A 406 C1 NAG B 1 1555 1555 1.43 LINK ND2 ASN A 428 C1 NAG A1103 1555 1555 1.45 LINK ND2 ASN A 467 C1 NAG A1104 1555 1555 1.42 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.47 CISPEP 1 MET A 346 PRO A 347 0 6.58 CRYST1 173.698 173.698 173.698 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005757 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005757 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005757 0.00000