HEADER HYDROLASE 21-JAN-14 4OJG TITLE THE CRYSTAL STRUCTURE OF V84D MUTANT OF S. SOLFATARICUS TITLE 2 ACYLPHOSPHATASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYLPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ACYLPHOSPHATE PHOSPHOHYDROLASE; COMPND 5 EC: 3.6.1.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: ATCC 35092 / DSM 1617 / JCM 11322 / P2; SOURCE 5 GENE: ACYP, SSO0887; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NATIVE-LIKE AGGREGATION, AMYLOID AGGREGATION, ACYLPHOSPHATASE, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.DE ROSA,M.BOLOGNESI,S.RICAGNO REVDAT 4 20-SEP-23 4OJG 1 REMARK SEQADV REVDAT 3 01-OCT-14 4OJG 1 JRNL REVDAT 2 18-JUN-14 4OJG 1 JRNL REVDAT 1 04-JUN-14 4OJG 0 JRNL AUTH M.DE ROSA,F.BEMPORAD,S.PELLEGRINO,F.CHITI,M.BOLOGNESI, JRNL AUTH 2 S.RICAGNO JRNL TITL EDGE STRAND ENGINEERING PREVENTS NATIVE-LIKE AGGREGATION IN JRNL TITL 2 SULFOLOBUS SOLFATARICUS ACYLPHOSPHATASE. JRNL REF FEBS J. V. 281 4072 2014 JRNL REFN ISSN 1742-464X JRNL PMID 24893801 JRNL DOI 10.1111/FEBS.12861 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 35134 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.690 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7504 - 3.3189 1.00 2575 155 0.1593 0.1788 REMARK 3 2 3.3189 - 2.6344 1.00 2450 148 0.1655 0.1981 REMARK 3 3 2.6344 - 2.3015 1.00 2431 147 0.1612 0.2000 REMARK 3 4 2.3015 - 2.0910 1.00 2393 144 0.1457 0.1787 REMARK 3 5 2.0910 - 1.9412 1.00 2413 147 0.1483 0.1952 REMARK 3 6 1.9412 - 1.8267 1.00 2360 142 0.1624 0.1942 REMARK 3 7 1.8267 - 1.7352 1.00 2400 144 0.1704 0.2266 REMARK 3 8 1.7352 - 1.6597 1.00 2378 144 0.1691 0.2114 REMARK 3 9 1.6597 - 1.5958 1.00 2365 143 0.1772 0.2423 REMARK 3 10 1.5958 - 1.5407 1.00 2349 141 0.1843 0.2021 REMARK 3 11 1.5407 - 1.4925 1.00 2386 144 0.1927 0.2378 REMARK 3 12 1.4925 - 1.4499 1.00 2345 142 0.2141 0.2379 REMARK 3 13 1.4499 - 1.4117 0.96 2251 136 0.2409 0.2389 REMARK 3 14 1.4117 - 1.3773 0.86 2038 123 0.2679 0.2874 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 1506 REMARK 3 ANGLE : 1.662 2022 REMARK 3 CHIRALITY : 0.104 205 REMARK 3 PLANARITY : 0.009 262 REMARK 3 DIHEDRAL : 14.436 569 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8499 3.7715 17.1535 REMARK 3 T TENSOR REMARK 3 T11: 0.0840 T22: 0.0834 REMARK 3 T33: 0.1047 T12: -0.0226 REMARK 3 T13: -0.0012 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 3.9499 L22: 1.1958 REMARK 3 L33: 1.5406 L12: -0.8999 REMARK 3 L13: -1.0643 L23: 0.1190 REMARK 3 S TENSOR REMARK 3 S11: -0.0353 S12: -0.0367 S13: 0.0545 REMARK 3 S21: 0.0061 S22: 0.0756 S23: -0.0342 REMARK 3 S31: 0.0391 S32: -0.0174 S33: -0.0529 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1420 -1.8425 26.9266 REMARK 3 T TENSOR REMARK 3 T11: 0.1700 T22: 0.1810 REMARK 3 T33: 0.1041 T12: 0.0117 REMARK 3 T13: -0.0040 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 8.1063 L22: 4.9774 REMARK 3 L33: 0.1980 L12: -4.6266 REMARK 3 L13: -0.5758 L23: 0.8860 REMARK 3 S TENSOR REMARK 3 S11: -0.1643 S12: -0.6016 S13: -0.2702 REMARK 3 S21: 0.3173 S22: 0.2735 S23: 0.0149 REMARK 3 S31: 0.0856 S32: -0.0386 S33: -0.0988 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9544 7.0161 22.4135 REMARK 3 T TENSOR REMARK 3 T11: 0.0991 T22: 0.0942 REMARK 3 T33: 0.0398 T12: -0.0092 REMARK 3 T13: -0.0013 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 9.0026 L22: 8.7186 REMARK 3 L33: 1.0430 L12: -6.8645 REMARK 3 L13: 0.5170 L23: -0.4467 REMARK 3 S TENSOR REMARK 3 S11: -0.0607 S12: -0.3415 S13: 0.4242 REMARK 3 S21: 0.1233 S22: 0.0791 S23: -0.2130 REMARK 3 S31: -0.0482 S32: -0.0558 S33: 0.0035 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9570 -1.8453 17.3547 REMARK 3 T TENSOR REMARK 3 T11: 0.0922 T22: 0.0887 REMARK 3 T33: 0.0588 T12: -0.0144 REMARK 3 T13: -0.0055 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 7.5198 L22: 2.4692 REMARK 3 L33: 3.4381 L12: -1.1299 REMARK 3 L13: -0.6614 L23: 0.8059 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: -0.0722 S13: -0.4445 REMARK 3 S21: 0.0573 S22: 0.0207 S23: 0.0169 REMARK 3 S31: 0.2050 S32: -0.0282 S33: -0.0053 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7835 0.5273 14.8137 REMARK 3 T TENSOR REMARK 3 T11: 0.0866 T22: 0.1009 REMARK 3 T33: 0.1199 T12: -0.0106 REMARK 3 T13: -0.0195 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 7.7137 L22: 1.1484 REMARK 3 L33: 3.3284 L12: 1.0832 REMARK 3 L13: -4.2095 L23: -1.4643 REMARK 3 S TENSOR REMARK 3 S11: 0.0105 S12: 0.1622 S13: 0.0876 REMARK 3 S21: -0.0630 S22: 0.0897 S23: 0.1992 REMARK 3 S31: 0.0882 S32: -0.1843 S33: -0.0779 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0701 7.5864 23.3685 REMARK 3 T TENSOR REMARK 3 T11: 0.1484 T22: 0.1528 REMARK 3 T33: 0.1570 T12: -0.0159 REMARK 3 T13: -0.0331 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 4.8148 L22: 2.1146 REMARK 3 L33: 3.4164 L12: -1.3543 REMARK 3 L13: -2.5130 L23: 2.6310 REMARK 3 S TENSOR REMARK 3 S11: 0.1916 S12: -0.4126 S13: 0.4468 REMARK 3 S21: 0.1071 S22: 0.0914 S23: -0.2311 REMARK 3 S31: -0.2429 S32: 0.2385 S33: -0.3056 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6307 1.5363 -1.7347 REMARK 3 T TENSOR REMARK 3 T11: 0.1311 T22: 0.1158 REMARK 3 T33: 0.0722 T12: 0.0120 REMARK 3 T13: 0.0003 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 7.9335 L22: 1.6911 REMARK 3 L33: 1.6857 L12: -0.0015 REMARK 3 L13: -0.9074 L23: 0.3012 REMARK 3 S TENSOR REMARK 3 S11: -0.0340 S12: 0.2656 S13: 0.1210 REMARK 3 S21: -0.1305 S22: 0.0520 S23: -0.0428 REMARK 3 S31: -0.0229 S32: 0.1070 S33: -0.0180 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.8216 -1.4977 -8.3073 REMARK 3 T TENSOR REMARK 3 T11: 0.1938 T22: 0.1592 REMARK 3 T33: 0.0814 T12: 0.0200 REMARK 3 T13: -0.0232 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 5.8902 L22: 3.7465 REMARK 3 L33: 3.2941 L12: 1.4506 REMARK 3 L13: 0.5178 L23: 0.4476 REMARK 3 S TENSOR REMARK 3 S11: 0.1149 S12: 0.6623 S13: -0.3070 REMARK 3 S21: -0.2782 S22: 0.0442 S23: -0.1116 REMARK 3 S31: 0.0576 S32: 0.1460 S33: -0.1177 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9851 -4.5399 -1.0328 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.0794 REMARK 3 T33: 0.1391 T12: 0.0155 REMARK 3 T13: -0.0355 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 5.2315 L22: 2.3070 REMARK 3 L33: 3.0851 L12: 0.5356 REMARK 3 L13: -0.9363 L23: 0.6770 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: 0.2060 S13: -0.5170 REMARK 3 S21: 0.0145 S22: 0.0373 S23: 0.0044 REMARK 3 S31: 0.1957 S32: 0.0120 S33: 0.0084 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6215 2.5213 -2.9158 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.0738 REMARK 3 T33: 0.0895 T12: 0.0106 REMARK 3 T13: -0.0268 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 4.4129 L22: 1.8661 REMARK 3 L33: 2.6326 L12: -0.3338 REMARK 3 L13: -0.2993 L23: 0.3524 REMARK 3 S TENSOR REMARK 3 S11: 0.1087 S12: 0.2844 S13: 0.0347 REMARK 3 S21: -0.3114 S22: -0.0800 S23: 0.0725 REMARK 3 S31: -0.0498 S32: -0.1285 S33: -0.0168 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OJG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084569. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35201 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 51.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4OJ3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M IMIDAZOLE MALATE, 25% PEG 4000, REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.70550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.86950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.79100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.86950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.70550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.79100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 TRP A 4 REMARK 465 SER A 5 REMARK 465 ASP A 6 REMARK 465 THR A 7 REMARK 465 GLU A 8 REMARK 465 VAL A 9 REMARK 465 PHE A 10 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 TRP B 4 REMARK 465 SER B 5 REMARK 465 ASP B 6 REMARK 465 THR B 7 REMARK 465 GLU B 8 REMARK 465 VAL B 9 REMARK 465 PHE B 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 GLU B 11 CG CD OE1 OE2 REMARK 470 GLU B 70 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 15 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 15 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 15 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OJ3 RELATED DB: PDB REMARK 900 MUTANT V84P REMARK 900 RELATED ID: 4OIX RELATED DB: PDB REMARK 900 W.T., TRUNCATED FORM (DELTAN11) REMARK 900 RELATED ID: 4OJ1 RELATED DB: PDB REMARK 900 W.T., TRUNCATED FORM (DELTAN11) REMARK 900 RELATED ID: 4OJH RELATED DB: PDB DBREF 4OJG A 1 101 UNP Q97ZL0 ACYP_SULSO 1 101 DBREF 4OJG B 1 101 UNP Q97ZL0 ACYP_SULSO 1 101 SEQADV 4OJG ASP A 84 UNP Q97ZL0 VAL 84 ENGINEERED MUTATION SEQADV 4OJG ASP B 84 UNP Q97ZL0 VAL 84 ENGINEERED MUTATION SEQRES 1 A 101 MET LYS LYS TRP SER ASP THR GLU VAL PHE GLU MET LEU SEQRES 2 A 101 LYS ARG MET TYR ALA ARG VAL TYR GLY LEU VAL GLN GLY SEQRES 3 A 101 VAL GLY PHE ARG LYS PHE VAL GLN ILE HIS ALA ILE ARG SEQRES 4 A 101 LEU GLY ILE LYS GLY TYR ALA LYS ASN LEU PRO ASP GLY SEQRES 5 A 101 SER VAL GLU VAL VAL ALA GLU GLY TYR GLU GLU ALA LEU SEQRES 6 A 101 SER LYS LEU LEU GLU ARG ILE LYS GLN GLY PRO PRO ALA SEQRES 7 A 101 ALA GLU VAL GLU LYS ASP ASP TYR SER PHE SER GLU TYR SEQRES 8 A 101 LYS GLY GLU PHE GLU ASP PHE GLU THR TYR SEQRES 1 B 101 MET LYS LYS TRP SER ASP THR GLU VAL PHE GLU MET LEU SEQRES 2 B 101 LYS ARG MET TYR ALA ARG VAL TYR GLY LEU VAL GLN GLY SEQRES 3 B 101 VAL GLY PHE ARG LYS PHE VAL GLN ILE HIS ALA ILE ARG SEQRES 4 B 101 LEU GLY ILE LYS GLY TYR ALA LYS ASN LEU PRO ASP GLY SEQRES 5 B 101 SER VAL GLU VAL VAL ALA GLU GLY TYR GLU GLU ALA LEU SEQRES 6 B 101 SER LYS LEU LEU GLU ARG ILE LYS GLN GLY PRO PRO ALA SEQRES 7 B 101 ALA GLU VAL GLU LYS ASP ASP TYR SER PHE SER GLU TYR SEQRES 8 B 101 LYS GLY GLU PHE GLU ASP PHE GLU THR TYR HET PO4 A 201 5 HET GOL B 201 6 HET PO4 B 202 5 HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 PO4 2(O4 P 3-) FORMUL 4 GOL C3 H8 O3 FORMUL 6 HOH *220(H2 O) HELIX 1 1 GLY A 28 LEU A 40 1 13 HELIX 2 2 GLU A 62 GLY A 75 1 14 HELIX 3 3 GLY B 28 GLY B 41 1 14 HELIX 4 4 GLU B 62 GLY B 75 1 14 SHEET 1 A10 PHE A 98 TYR A 101 0 SHEET 2 A10 LYS A 43 ASN A 48 1 N ALA A 46 O TYR A 101 SHEET 3 A10 VAL A 54 TYR A 61 -1 O GLU A 55 N LYS A 47 SHEET 4 A10 LEU A 13 LEU A 23 -1 N MET A 16 O ALA A 58 SHEET 5 A10 GLU A 80 SER A 89 -1 O GLU A 82 N TYR A 21 SHEET 6 A10 GLU B 80 SER B 89 -1 O PHE B 88 N TYR A 86 SHEET 7 A10 LEU B 13 LEU B 23 -1 N TYR B 21 O GLU B 82 SHEET 8 A10 VAL B 54 TYR B 61 -1 O ALA B 58 N MET B 16 SHEET 9 A10 LYS B 43 ASN B 48 -1 N LYS B 47 O GLU B 55 SHEET 10 A10 PHE B 98 TYR B 101 1 O GLU B 99 N GLY B 44 SITE 1 AC1 11 VAL A 24 GLN A 25 GLY A 26 VAL A 27 SITE 2 AC1 11 GLY A 28 PHE A 29 ARG A 30 ASN A 48 SITE 3 AC1 11 HOH A 303 HOH A 306 HOH A 425 SITE 1 AC2 10 SER A 66 LEU A 69 PHE A 88 HOH A 307 SITE 2 AC2 10 SER B 66 LEU B 69 PHE B 88 HOH B 304 SITE 3 AC2 10 HOH B 325 HOH B 362 SITE 1 AC3 10 VAL B 24 GLN B 25 GLY B 26 VAL B 27 SITE 2 AC3 10 GLY B 28 PHE B 29 ARG B 30 ASN B 48 SITE 3 AC3 10 HOH B 322 HOH B 384 CRYST1 35.411 45.582 103.739 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028240 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021938 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009640 0.00000