data_4OMX # _entry.id 4OMX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OMX pdb_00004omx 10.2210/pdb4omx/pdb RCSB RCSB084694 ? ? WWPDB D_1000084694 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-19 2 'Structure model' 1 1 2014-12-17 3 'Structure model' 1 2 2023-09-20 4 'Structure model' 1 3 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site 6 4 'Structure model' pdbx_entry_details 7 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OMX _pdbx_database_status.recvd_initial_deposition_date 2014-01-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4OMW _pdbx_database_related.details 'Crystal structure of goat beta-lactoglobulin (orthorhombic form)' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Loch, J.I.' 1 'Swiatek, S.' 2 'Czub, M.' 3 'Ludwikowska, M.' 4 'Lewinski, K.' 5 # _citation.id primary _citation.title 'Conformational variability of goat beta-lactoglobulin: Crystallographic and thermodynamic studies.' _citation.journal_abbrev Int.J.Biol.Macromol. _citation.journal_volume 72C _citation.page_first 1283 _citation.page_last 1291 _citation.year 2014 _citation.journal_id_ASTM IJBMDR _citation.country UK _citation.journal_id_ISSN 0141-8130 _citation.journal_id_CSD 0708 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25450833 _citation.pdbx_database_id_DOI 10.1016/j.ijbiomac.2014.10.031 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Loch, J.I.' 1 ? primary 'Bonarek, P.' 2 ? primary 'Polit, A.' 3 ? primary 'Swiatek, S.' 4 ? primary 'Czub, M.' 5 ? primary 'Ludwikowska, M.' 6 ? primary 'Lewinski, K.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat beta-lactoglobulin 18212.191 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn UREA 60.055 3 ? ? ? ? 4 non-polymer syn FORMAMIDE 45.041 2 ? ? ? ? 5 water nat water 18.015 161 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Beta-LG # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGNLEILLQKWENGECAQKKIIAEKTKIPA VFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDKEALEKFDKALKALPMHIRLAFNPTQLEGQC HV ; _entity_poly.pdbx_seq_one_letter_code_can ;IIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGNLEILLQKWENGECAQKKIIAEKTKIPA VFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDKEALEKFDKALKALPMHIRLAFNPTQLEGQC HV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 UREA URE 4 FORMAMIDE ARF 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ILE n 1 3 VAL n 1 4 THR n 1 5 GLN n 1 6 THR n 1 7 MET n 1 8 LYS n 1 9 GLY n 1 10 LEU n 1 11 ASP n 1 12 ILE n 1 13 GLN n 1 14 LYS n 1 15 VAL n 1 16 ALA n 1 17 GLY n 1 18 THR n 1 19 TRP n 1 20 TYR n 1 21 SER n 1 22 LEU n 1 23 ALA n 1 24 MET n 1 25 ALA n 1 26 ALA n 1 27 SER n 1 28 ASP n 1 29 ILE n 1 30 SER n 1 31 LEU n 1 32 LEU n 1 33 ASP n 1 34 ALA n 1 35 GLN n 1 36 SER n 1 37 ALA n 1 38 PRO n 1 39 LEU n 1 40 ARG n 1 41 VAL n 1 42 TYR n 1 43 VAL n 1 44 GLU n 1 45 GLU n 1 46 LEU n 1 47 LYS n 1 48 PRO n 1 49 THR n 1 50 PRO n 1 51 GLU n 1 52 GLY n 1 53 ASN n 1 54 LEU n 1 55 GLU n 1 56 ILE n 1 57 LEU n 1 58 LEU n 1 59 GLN n 1 60 LYS n 1 61 TRP n 1 62 GLU n 1 63 ASN n 1 64 GLY n 1 65 GLU n 1 66 CYS n 1 67 ALA n 1 68 GLN n 1 69 LYS n 1 70 LYS n 1 71 ILE n 1 72 ILE n 1 73 ALA n 1 74 GLU n 1 75 LYS n 1 76 THR n 1 77 LYS n 1 78 ILE n 1 79 PRO n 1 80 ALA n 1 81 VAL n 1 82 PHE n 1 83 LYS n 1 84 ILE n 1 85 ASP n 1 86 ALA n 1 87 LEU n 1 88 ASN n 1 89 GLU n 1 90 ASN n 1 91 LYS n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 LEU n 1 96 ASP n 1 97 THR n 1 98 ASP n 1 99 TYR n 1 100 LYS n 1 101 LYS n 1 102 TYR n 1 103 LEU n 1 104 LEU n 1 105 PHE n 1 106 CYS n 1 107 MET n 1 108 GLU n 1 109 ASN n 1 110 SER n 1 111 ALA n 1 112 GLU n 1 113 PRO n 1 114 GLU n 1 115 GLN n 1 116 SER n 1 117 LEU n 1 118 ALA n 1 119 CYS n 1 120 GLN n 1 121 CYS n 1 122 LEU n 1 123 VAL n 1 124 ARG n 1 125 THR n 1 126 PRO n 1 127 GLU n 1 128 VAL n 1 129 ASP n 1 130 LYS n 1 131 GLU n 1 132 ALA n 1 133 LEU n 1 134 GLU n 1 135 LYS n 1 136 PHE n 1 137 ASP n 1 138 LYS n 1 139 ALA n 1 140 LEU n 1 141 LYS n 1 142 ALA n 1 143 LEU n 1 144 PRO n 1 145 MET n 1 146 HIS n 1 147 ILE n 1 148 ARG n 1 149 LEU n 1 150 ALA n 1 151 PHE n 1 152 ASN n 1 153 PRO n 1 154 THR n 1 155 GLN n 1 156 LEU n 1 157 GLU n 1 158 GLY n 1 159 GLN n 1 160 CYS n 1 161 HIS n 1 162 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'domestic goat, goats' _entity_src_nat.pdbx_organism_scientific 'Capra hircus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9925 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARF 'L-peptide NH3 amino terminus' . FORMAMIDE ? 'C H3 N O' 45.041 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 URE non-polymer . UREA ? 'C H4 N2 O' 60.055 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 1 1 ILE ILE A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 MET 24 24 24 MET MET A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TRP 61 61 61 TRP TRP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 GLN 68 68 68 GLN GLN A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 MET 107 107 107 MET MET A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 CYS 119 119 119 CYS CYS A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 CYS 121 121 121 CYS CYS A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 GLU 131 131 131 GLU GLU A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 LYS 135 135 135 LYS LYS A . n A 1 136 PHE 136 136 136 PHE PHE A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 MET 145 145 145 MET MET A . n A 1 146 HIS 146 146 146 HIS HIS A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 PRO 153 153 153 PRO PRO A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 CYS 160 160 160 CYS CYS A . n A 1 161 HIS 161 161 161 HIS HIS A . n A 1 162 VAL 162 162 162 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 201 1 SO4 SO4 A . C 2 SO4 1 202 2 SO4 SO4 A . D 3 URE 1 203 1 URE URE A . E 3 URE 1 204 2 URE URE A . F 3 URE 1 205 3 URE URE A . G 4 ARF 1 206 1 ARF ARF A . H 4 ARF 1 207 2 ARF ARF A . I 5 HOH 1 301 3 HOH HOH A . I 5 HOH 2 302 4 HOH HOH A . I 5 HOH 3 303 5 HOH HOH A . I 5 HOH 4 304 6 HOH HOH A . I 5 HOH 5 305 7 HOH HOH A . I 5 HOH 6 306 8 HOH HOH A . I 5 HOH 7 307 9 HOH HOH A . I 5 HOH 8 308 10 HOH HOH A . I 5 HOH 9 309 11 HOH HOH A . I 5 HOH 10 310 12 HOH HOH A . I 5 HOH 11 311 13 HOH HOH A . I 5 HOH 12 312 15 HOH HOH A . I 5 HOH 13 313 16 HOH HOH A . I 5 HOH 14 314 17 HOH HOH A . I 5 HOH 15 315 18 HOH HOH A . I 5 HOH 16 316 19 HOH HOH A . I 5 HOH 17 317 21 HOH HOH A . I 5 HOH 18 318 22 HOH HOH A . I 5 HOH 19 319 24 HOH HOH A . I 5 HOH 20 320 25 HOH HOH A . I 5 HOH 21 321 26 HOH HOH A . I 5 HOH 22 322 27 HOH HOH A . I 5 HOH 23 323 28 HOH HOH A . I 5 HOH 24 324 29 HOH HOH A . I 5 HOH 25 325 30 HOH HOH A . I 5 HOH 26 326 31 HOH HOH A . I 5 HOH 27 327 32 HOH HOH A . I 5 HOH 28 328 33 HOH HOH A . I 5 HOH 29 329 34 HOH HOH A . I 5 HOH 30 330 35 HOH HOH A . I 5 HOH 31 331 36 HOH HOH A . I 5 HOH 32 332 37 HOH HOH A . I 5 HOH 33 333 38 HOH HOH A . I 5 HOH 34 334 39 HOH HOH A . I 5 HOH 35 335 40 HOH HOH A . I 5 HOH 36 336 44 HOH HOH A . I 5 HOH 37 337 45 HOH HOH A . I 5 HOH 38 338 46 HOH HOH A . I 5 HOH 39 339 47 HOH HOH A . I 5 HOH 40 340 48 HOH HOH A . I 5 HOH 41 341 49 HOH HOH A . I 5 HOH 42 342 50 HOH HOH A . I 5 HOH 43 343 51 HOH HOH A . I 5 HOH 44 344 52 HOH HOH A . I 5 HOH 45 345 54 HOH HOH A . I 5 HOH 46 346 56 HOH HOH A . I 5 HOH 47 347 57 HOH HOH A . I 5 HOH 48 348 58 HOH HOH A . I 5 HOH 49 349 59 HOH HOH A . I 5 HOH 50 350 61 HOH HOH A . I 5 HOH 51 351 63 HOH HOH A . I 5 HOH 52 352 65 HOH HOH A . I 5 HOH 53 353 66 HOH HOH A . I 5 HOH 54 354 67 HOH HOH A . I 5 HOH 55 355 68 HOH HOH A . I 5 HOH 56 356 69 HOH HOH A . I 5 HOH 57 357 70 HOH HOH A . I 5 HOH 58 358 71 HOH HOH A . I 5 HOH 59 359 72 HOH HOH A . I 5 HOH 60 360 73 HOH HOH A . I 5 HOH 61 361 74 HOH HOH A . I 5 HOH 62 362 75 HOH HOH A . I 5 HOH 63 363 76 HOH HOH A . I 5 HOH 64 364 77 HOH HOH A . I 5 HOH 65 365 78 HOH HOH A . I 5 HOH 66 366 79 HOH HOH A . I 5 HOH 67 367 80 HOH HOH A . I 5 HOH 68 368 81 HOH HOH A . I 5 HOH 69 369 82 HOH HOH A . I 5 HOH 70 370 83 HOH HOH A . I 5 HOH 71 371 85 HOH HOH A . I 5 HOH 72 372 86 HOH HOH A . I 5 HOH 73 373 87 HOH HOH A . I 5 HOH 74 374 88 HOH HOH A . I 5 HOH 75 375 89 HOH HOH A . I 5 HOH 76 376 90 HOH HOH A . I 5 HOH 77 377 91 HOH HOH A . I 5 HOH 78 378 92 HOH HOH A . I 5 HOH 79 379 93 HOH HOH A . I 5 HOH 80 380 94 HOH HOH A . I 5 HOH 81 381 95 HOH HOH A . I 5 HOH 82 382 96 HOH HOH A . I 5 HOH 83 383 97 HOH HOH A . I 5 HOH 84 384 99 HOH HOH A . I 5 HOH 85 385 100 HOH HOH A . I 5 HOH 86 386 101 HOH HOH A . I 5 HOH 87 387 102 HOH HOH A . I 5 HOH 88 388 103 HOH HOH A . I 5 HOH 89 389 105 HOH HOH A . I 5 HOH 90 390 106 HOH HOH A . I 5 HOH 91 391 107 HOH HOH A . I 5 HOH 92 392 110 HOH HOH A . I 5 HOH 93 393 111 HOH HOH A . I 5 HOH 94 394 112 HOH HOH A . I 5 HOH 95 395 114 HOH HOH A . I 5 HOH 96 396 118 HOH HOH A . I 5 HOH 97 397 119 HOH HOH A . I 5 HOH 98 398 120 HOH HOH A . I 5 HOH 99 399 121 HOH HOH A . I 5 HOH 100 400 122 HOH HOH A . I 5 HOH 101 401 123 HOH HOH A . I 5 HOH 102 402 125 HOH HOH A . I 5 HOH 103 403 126 HOH HOH A . I 5 HOH 104 404 127 HOH HOH A . I 5 HOH 105 405 128 HOH HOH A . I 5 HOH 106 406 129 HOH HOH A . I 5 HOH 107 407 130 HOH HOH A . I 5 HOH 108 408 132 HOH HOH A . I 5 HOH 109 409 133 HOH HOH A . I 5 HOH 110 410 134 HOH HOH A . I 5 HOH 111 411 135 HOH HOH A . I 5 HOH 112 412 136 HOH HOH A . I 5 HOH 113 413 137 HOH HOH A . I 5 HOH 114 414 138 HOH HOH A . I 5 HOH 115 415 139 HOH HOH A . I 5 HOH 116 416 140 HOH HOH A . I 5 HOH 117 417 141 HOH HOH A . I 5 HOH 118 418 142 HOH HOH A . I 5 HOH 119 419 144 HOH HOH A . I 5 HOH 120 420 145 HOH HOH A . I 5 HOH 121 421 146 HOH HOH A . I 5 HOH 122 422 147 HOH HOH A . I 5 HOH 123 423 148 HOH HOH A . I 5 HOH 124 424 149 HOH HOH A . I 5 HOH 125 425 150 HOH HOH A . I 5 HOH 126 426 151 HOH HOH A . I 5 HOH 127 427 152 HOH HOH A . I 5 HOH 128 428 154 HOH HOH A . I 5 HOH 129 429 155 HOH HOH A . I 5 HOH 130 430 157 HOH HOH A . I 5 HOH 131 431 158 HOH HOH A . I 5 HOH 132 432 159 HOH HOH A . I 5 HOH 133 433 162 HOH HOH A . I 5 HOH 134 434 163 HOH HOH A . I 5 HOH 135 435 164 HOH HOH A . I 5 HOH 136 436 165 HOH HOH A . I 5 HOH 137 437 166 HOH HOH A . I 5 HOH 138 438 167 HOH HOH A . I 5 HOH 139 439 168 HOH HOH A . I 5 HOH 140 440 169 HOH HOH A . I 5 HOH 141 441 170 HOH HOH A . I 5 HOH 142 442 171 HOH HOH A . I 5 HOH 143 443 172 HOH HOH A . I 5 HOH 144 444 173 HOH HOH A . I 5 HOH 145 445 174 HOH HOH A . I 5 HOH 146 446 175 HOH HOH A . I 5 HOH 147 447 176 HOH HOH A . I 5 HOH 148 448 177 HOH HOH A . I 5 HOH 149 449 178 HOH HOH A . I 5 HOH 150 450 179 HOH HOH A . I 5 HOH 151 451 180 HOH HOH A . I 5 HOH 152 452 181 HOH HOH A . I 5 HOH 153 453 182 HOH HOH A . I 5 HOH 154 454 183 HOH HOH A . I 5 HOH 155 455 184 HOH HOH A . I 5 HOH 156 456 185 HOH HOH A . I 5 HOH 157 457 186 HOH HOH A . I 5 HOH 158 458 187 HOH HOH A . I 5 HOH 159 459 188 HOH HOH A . I 5 HOH 160 460 189 HOH HOH A . I 5 HOH 161 461 190 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrysalisPro 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0032 ? 3 CrysalisPro 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4OMX _cell.length_a 97.490 _cell.length_b 97.490 _cell.length_c 67.820 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OMX _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4OMX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.11 _exptl_crystal.density_percent_sol 75.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '2.3 M (NH4)2SO4 in 0.5 M Tris-HCl pH 8.5 , VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'AGILENT ATLAS CCD' _diffrn_detector.pdbx_collection_date 2013-03-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'multilayer X-ray optics' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type 'OXFORD DIFFRACTION ENHANCE ULTRA' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 4OMX _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 14.28 _reflns.d_resolution_high 2.30 _reflns.number_obs 16871 _reflns.number_all 16973 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.080 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.392 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2445 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4OMX _refine.ls_number_reflns_obs 15901 _refine.ls_number_reflns_all . _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 14.28 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.31 _refine.ls_R_factor_obs 0.19573 _refine.ls_R_factor_all . _refine.ls_R_factor_R_work 0.19342 _refine.ls_R_factor_R_free 0.23987 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 852 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.B_iso_mean 36.081 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1BEB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.178 _refine.pdbx_overall_ESU_R_Free 0.173 _refine.overall_SU_ML 0.125 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.329 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1274 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 161 _refine_hist.number_atoms_total 1463 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 14.28 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.010 0.020 ? 1375 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1380 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.408 2.004 ? 1867 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.736 3.003 ? 3186 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.025 5.000 ? 174 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 35.178 26.250 ? 56 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.800 15.000 ? 266 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 12.458 15.000 ? 4 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.084 0.200 ? 217 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.021 ? 1534 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 304 ? 'X-RAY DIFFRACTION' r_mcbond_it 2.199 3.308 ? 671 ? 'X-RAY DIFFRACTION' r_mcbond_other 2.199 3.308 ? 671 ? 'X-RAY DIFFRACTION' r_mcangle_it 3.530 4.922 ? 834 ? 'X-RAY DIFFRACTION' r_mcangle_other 3.527 4.927 ? 835 ? 'X-RAY DIFFRACTION' r_scbond_it 3.024 3.793 ? 704 ? 'X-RAY DIFFRACTION' r_scbond_other 3.022 3.797 ? 705 ? 'X-RAY DIFFRACTION' r_scangle_other 5.064 5.525 ? 1028 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 7.805 27.696 ? 1618 ? 'X-RAY DIFFRACTION' r_long_range_B_other 7.802 27.718 ? 1619 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.358 _refine_ls_shell.number_reflns_R_work 1121 _refine_ls_shell.R_factor_R_work 0.276 _refine_ls_shell.percent_reflns_obs 99.92 _refine_ls_shell.R_factor_R_free 0.290 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2468 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4OMX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4OMX _struct.title 'Crystal structure of goat beta-lactoglobulin (trigonal form)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OMX _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'lipocalin, transport, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LACB_CAPHI _struct_ref.pdbx_db_accession P02756 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGNLEILLQKWENGECAQKKIIAEKTKIPA VFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDKEALEKFDKALKALPMHIRLAFNPTQLEGQC HV ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4OMX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 162 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02756 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 180 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 162 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 45.2133333333 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 11 ? ALA A 16 ? ASP A 11 ALA A 16 5 ? 6 HELX_P HELX_P2 2 ASP A 28 ? LEU A 32 ? ASP A 28 LEU A 32 5 ? 5 HELX_P HELX_P3 3 GLU A 112 ? SER A 116 ? GLU A 112 SER A 116 5 ? 5 HELX_P HELX_P4 4 ASP A 129 ? ALA A 142 ? ASP A 129 ALA A 142 1 ? 14 HELX_P HELX_P5 5 ASN A 152 ? GLY A 158 ? ASN A 152 GLY A 158 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 66 SG ? ? ? 1_555 A CYS 160 SG ? ? A CYS 66 A CYS 160 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf2 disulf ? ? A CYS 106 SG ? ? ? 1_555 A CYS 119 SG ? ? A CYS 106 A CYS 119 1_555 ? ? ? ? ? ? ? 2.089 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 66 ? CYS A 160 ? CYS A 66 ? 1_555 CYS A 160 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 106 ? CYS A 119 ? CYS A 106 ? 1_555 CYS A 119 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 17 ? THR A 18 ? GLY A 17 THR A 18 A 2 VAL A 41 ? PRO A 48 ? VAL A 41 PRO A 48 A 3 LEU A 54 ? GLU A 62 ? LEU A 54 GLU A 62 A 4 GLU A 65 ? LYS A 75 ? GLU A 65 LYS A 75 A 5 VAL A 81 ? ALA A 86 ? VAL A 81 ALA A 86 A 6 GLU A 89 ? THR A 97 ? GLU A 89 THR A 97 A 7 TYR A 102 ? GLU A 108 ? TYR A 102 GLU A 108 A 8 ALA A 118 ? VAL A 123 ? ALA A 118 VAL A 123 A 9 TYR A 20 ? ALA A 26 ? TYR A 20 ALA A 26 A 10 ILE A 147 ? ALA A 150 ? ILE A 147 ALA A 150 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 17 ? N GLY A 17 O LEU A 46 ? O LEU A 46 A 2 3 N GLU A 44 ? N GLU A 44 O LEU A 57 ? O LEU A 57 A 3 4 N ILE A 56 ? N ILE A 56 O ILE A 71 ? O ILE A 71 A 4 5 N GLU A 74 ? N GLU A 74 O LYS A 83 ? O LYS A 83 A 5 6 N PHE A 82 ? N PHE A 82 O VAL A 92 ? O VAL A 92 A 6 7 N ASP A 96 ? N ASP A 96 O LEU A 104 ? O LEU A 104 A 7 8 N PHE A 105 ? N PHE A 105 O GLN A 120 ? O GLN A 120 A 8 9 O CYS A 119 ? O CYS A 119 N ALA A 25 ? N ALA A 25 A 9 10 N MET A 24 ? N MET A 24 O LEU A 149 ? O LEU A 149 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 201 ? 6 'BINDING SITE FOR RESIDUE SO4 A 201' AC2 Software A SO4 202 ? 5 'BINDING SITE FOR RESIDUE SO4 A 202' AC3 Software A URE 203 ? 7 'BINDING SITE FOR RESIDUE URE A 203' AC4 Software A URE 204 ? 3 'BINDING SITE FOR RESIDUE URE A 204' AC5 Software A URE 205 ? 3 'BINDING SITE FOR RESIDUE URE A 205' AC6 Software A ARF 206 ? 6 'BINDING SITE FOR RESIDUE ARF A 206' AC7 Software A ARF 207 ? 7 'BINDING SITE FOR RESIDUE ARF A 207' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS A 8 ? LYS A 8 . ? 1_555 ? 2 AC1 6 GLY A 9 ? GLY A 9 . ? 1_555 ? 3 AC1 6 PRO A 79 ? PRO A 79 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 322 . ? 1_555 ? 5 AC1 6 HOH I . ? HOH A 337 . ? 1_555 ? 6 AC1 6 HOH I . ? HOH A 339 . ? 1_555 ? 7 AC2 5 LYS A 69 ? LYS A 69 . ? 1_555 ? 8 AC2 5 ALA A 86 ? ALA A 86 . ? 1_555 ? 9 AC2 5 LEU A 87 ? LEU A 87 . ? 1_555 ? 10 AC2 5 HOH I . ? HOH A 309 . ? 1_555 ? 11 AC2 5 HOH I . ? HOH A 416 . ? 1_555 ? 12 AC3 7 ILE A 2 ? ILE A 2 . ? 1_555 ? 13 AC3 7 ASN A 53 ? ASN A 53 . ? 3_654 ? 14 AC3 7 GLU A 74 ? GLU A 74 . ? 3_654 ? 15 AC3 7 LYS A 75 ? LYS A 75 . ? 3_654 ? 16 AC3 7 PRO A 113 ? PRO A 113 . ? 1_555 ? 17 AC3 7 GLU A 114 ? GLU A 114 . ? 1_555 ? 18 AC3 7 ARF G . ? ARF A 206 . ? 1_555 ? 19 AC4 3 THR A 76 ? THR A 76 . ? 1_555 ? 20 AC4 3 LYS A 77 ? LYS A 77 . ? 1_555 ? 21 AC4 3 HOH I . ? HOH A 350 . ? 1_555 ? 22 AC5 3 ASP A 129 ? ASP A 129 . ? 1_555 ? 23 AC5 3 LYS A 130 ? LYS A 130 . ? 1_555 ? 24 AC5 3 GLU A 131 ? GLU A 131 . ? 1_555 ? 25 AC6 6 GLU A 112 ? GLU A 112 . ? 1_555 ? 26 AC6 6 PRO A 113 ? PRO A 113 . ? 1_555 ? 27 AC6 6 GLU A 114 ? GLU A 114 . ? 1_555 ? 28 AC6 6 GLN A 115 ? GLN A 115 . ? 1_555 ? 29 AC6 6 URE D . ? URE A 203 . ? 1_555 ? 30 AC6 6 HOH I . ? HOH A 431 . ? 1_555 ? 31 AC7 7 MET A 145 ? MET A 145 . ? 1_555 ? 32 AC7 7 HIS A 146 ? HIS A 146 . ? 1_555 ? 33 AC7 7 ILE A 147 ? ILE A 147 . ? 1_555 ? 34 AC7 7 ARG A 148 ? ARG A 148 . ? 1_555 ? 35 AC7 7 ARG A 148 ? ARG A 148 . ? 5_555 ? 36 AC7 7 HOH I . ? HOH A 444 . ? 5_555 ? 37 AC7 7 HOH I . ? HOH A 460 . ? 5_555 ? # _pdbx_entry_details.entry_id 4OMX _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 34 ? ? 88.55 148.36 2 1 TYR A 99 ? ? 68.81 -42.40 3 1 SER A 116 ? ? -140.13 -5.40 # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARF N N N N 14 ARF C C N N 15 ARF O O N N 16 ARF HN1 H N N 17 ARF HN2 H N N 18 ARF H H N N 19 ARG N N N N 20 ARG CA C N S 21 ARG C C N N 22 ARG O O N N 23 ARG CB C N N 24 ARG CG C N N 25 ARG CD C N N 26 ARG NE N N N 27 ARG CZ C N N 28 ARG NH1 N N N 29 ARG NH2 N N N 30 ARG OXT O N N 31 ARG H H N N 32 ARG H2 H N N 33 ARG HA H N N 34 ARG HB2 H N N 35 ARG HB3 H N N 36 ARG HG2 H N N 37 ARG HG3 H N N 38 ARG HD2 H N N 39 ARG HD3 H N N 40 ARG HE H N N 41 ARG HH11 H N N 42 ARG HH12 H N N 43 ARG HH21 H N N 44 ARG HH22 H N N 45 ARG HXT H N N 46 ASN N N N N 47 ASN CA C N S 48 ASN C C N N 49 ASN O O N N 50 ASN CB C N N 51 ASN CG C N N 52 ASN OD1 O N N 53 ASN ND2 N N N 54 ASN OXT O N N 55 ASN H H N N 56 ASN H2 H N N 57 ASN HA H N N 58 ASN HB2 H N N 59 ASN HB3 H N N 60 ASN HD21 H N N 61 ASN HD22 H N N 62 ASN HXT H N N 63 ASP N N N N 64 ASP CA C N S 65 ASP C C N N 66 ASP O O N N 67 ASP CB C N N 68 ASP CG C N N 69 ASP OD1 O N N 70 ASP OD2 O N N 71 ASP OXT O N N 72 ASP H H N N 73 ASP H2 H N N 74 ASP HA H N N 75 ASP HB2 H N N 76 ASP HB3 H N N 77 ASP HD2 H N N 78 ASP HXT H N N 79 CYS N N N N 80 CYS CA C N R 81 CYS C C N N 82 CYS O O N N 83 CYS CB C N N 84 CYS SG S N N 85 CYS OXT O N N 86 CYS H H N N 87 CYS H2 H N N 88 CYS HA H N N 89 CYS HB2 H N N 90 CYS HB3 H N N 91 CYS HG H N N 92 CYS HXT H N N 93 GLN N N N N 94 GLN CA C N S 95 GLN C C N N 96 GLN O O N N 97 GLN CB C N N 98 GLN CG C N N 99 GLN CD C N N 100 GLN OE1 O N N 101 GLN NE2 N N N 102 GLN OXT O N N 103 GLN H H N N 104 GLN H2 H N N 105 GLN HA H N N 106 GLN HB2 H N N 107 GLN HB3 H N N 108 GLN HG2 H N N 109 GLN HG3 H N N 110 GLN HE21 H N N 111 GLN HE22 H N N 112 GLN HXT H N N 113 GLU N N N N 114 GLU CA C N S 115 GLU C C N N 116 GLU O O N N 117 GLU CB C N N 118 GLU CG C N N 119 GLU CD C N N 120 GLU OE1 O N N 121 GLU OE2 O N N 122 GLU OXT O N N 123 GLU H H N N 124 GLU H2 H N N 125 GLU HA H N N 126 GLU HB2 H N N 127 GLU HB3 H N N 128 GLU HG2 H N N 129 GLU HG3 H N N 130 GLU HE2 H N N 131 GLU HXT H N N 132 GLY N N N N 133 GLY CA C N N 134 GLY C C N N 135 GLY O O N N 136 GLY OXT O N N 137 GLY H H N N 138 GLY H2 H N N 139 GLY HA2 H N N 140 GLY HA3 H N N 141 GLY HXT H N N 142 HIS N N N N 143 HIS CA C N S 144 HIS C C N N 145 HIS O O N N 146 HIS CB C N N 147 HIS CG C Y N 148 HIS ND1 N Y N 149 HIS CD2 C Y N 150 HIS CE1 C Y N 151 HIS NE2 N Y N 152 HIS OXT O N N 153 HIS H H N N 154 HIS H2 H N N 155 HIS HA H N N 156 HIS HB2 H N N 157 HIS HB3 H N N 158 HIS HD1 H N N 159 HIS HD2 H N N 160 HIS HE1 H N N 161 HIS HE2 H N N 162 HIS HXT H N N 163 HOH O O N N 164 HOH H1 H N N 165 HOH H2 H N N 166 ILE N N N N 167 ILE CA C N S 168 ILE C C N N 169 ILE O O N N 170 ILE CB C N S 171 ILE CG1 C N N 172 ILE CG2 C N N 173 ILE CD1 C N N 174 ILE OXT O N N 175 ILE H H N N 176 ILE H2 H N N 177 ILE HA H N N 178 ILE HB H N N 179 ILE HG12 H N N 180 ILE HG13 H N N 181 ILE HG21 H N N 182 ILE HG22 H N N 183 ILE HG23 H N N 184 ILE HD11 H N N 185 ILE HD12 H N N 186 ILE HD13 H N N 187 ILE HXT H N N 188 LEU N N N N 189 LEU CA C N S 190 LEU C C N N 191 LEU O O N N 192 LEU CB C N N 193 LEU CG C N N 194 LEU CD1 C N N 195 LEU CD2 C N N 196 LEU OXT O N N 197 LEU H H N N 198 LEU H2 H N N 199 LEU HA H N N 200 LEU HB2 H N N 201 LEU HB3 H N N 202 LEU HG H N N 203 LEU HD11 H N N 204 LEU HD12 H N N 205 LEU HD13 H N N 206 LEU HD21 H N N 207 LEU HD22 H N N 208 LEU HD23 H N N 209 LEU HXT H N N 210 LYS N N N N 211 LYS CA C N S 212 LYS C C N N 213 LYS O O N N 214 LYS CB C N N 215 LYS CG C N N 216 LYS CD C N N 217 LYS CE C N N 218 LYS NZ N N N 219 LYS OXT O N N 220 LYS H H N N 221 LYS H2 H N N 222 LYS HA H N N 223 LYS HB2 H N N 224 LYS HB3 H N N 225 LYS HG2 H N N 226 LYS HG3 H N N 227 LYS HD2 H N N 228 LYS HD3 H N N 229 LYS HE2 H N N 230 LYS HE3 H N N 231 LYS HZ1 H N N 232 LYS HZ2 H N N 233 LYS HZ3 H N N 234 LYS HXT H N N 235 MET N N N N 236 MET CA C N S 237 MET C C N N 238 MET O O N N 239 MET CB C N N 240 MET CG C N N 241 MET SD S N N 242 MET CE C N N 243 MET OXT O N N 244 MET H H N N 245 MET H2 H N N 246 MET HA H N N 247 MET HB2 H N N 248 MET HB3 H N N 249 MET HG2 H N N 250 MET HG3 H N N 251 MET HE1 H N N 252 MET HE2 H N N 253 MET HE3 H N N 254 MET HXT H N N 255 PHE N N N N 256 PHE CA C N S 257 PHE C C N N 258 PHE O O N N 259 PHE CB C N N 260 PHE CG C Y N 261 PHE CD1 C Y N 262 PHE CD2 C Y N 263 PHE CE1 C Y N 264 PHE CE2 C Y N 265 PHE CZ C Y N 266 PHE OXT O N N 267 PHE H H N N 268 PHE H2 H N N 269 PHE HA H N N 270 PHE HB2 H N N 271 PHE HB3 H N N 272 PHE HD1 H N N 273 PHE HD2 H N N 274 PHE HE1 H N N 275 PHE HE2 H N N 276 PHE HZ H N N 277 PHE HXT H N N 278 PRO N N N N 279 PRO CA C N S 280 PRO C C N N 281 PRO O O N N 282 PRO CB C N N 283 PRO CG C N N 284 PRO CD C N N 285 PRO OXT O N N 286 PRO H H N N 287 PRO HA H N N 288 PRO HB2 H N N 289 PRO HB3 H N N 290 PRO HG2 H N N 291 PRO HG3 H N N 292 PRO HD2 H N N 293 PRO HD3 H N N 294 PRO HXT H N N 295 SER N N N N 296 SER CA C N S 297 SER C C N N 298 SER O O N N 299 SER CB C N N 300 SER OG O N N 301 SER OXT O N N 302 SER H H N N 303 SER H2 H N N 304 SER HA H N N 305 SER HB2 H N N 306 SER HB3 H N N 307 SER HG H N N 308 SER HXT H N N 309 SO4 S S N N 310 SO4 O1 O N N 311 SO4 O2 O N N 312 SO4 O3 O N N 313 SO4 O4 O N N 314 THR N N N N 315 THR CA C N S 316 THR C C N N 317 THR O O N N 318 THR CB C N R 319 THR OG1 O N N 320 THR CG2 C N N 321 THR OXT O N N 322 THR H H N N 323 THR H2 H N N 324 THR HA H N N 325 THR HB H N N 326 THR HG1 H N N 327 THR HG21 H N N 328 THR HG22 H N N 329 THR HG23 H N N 330 THR HXT H N N 331 TRP N N N N 332 TRP CA C N S 333 TRP C C N N 334 TRP O O N N 335 TRP CB C N N 336 TRP CG C Y N 337 TRP CD1 C Y N 338 TRP CD2 C Y N 339 TRP NE1 N Y N 340 TRP CE2 C Y N 341 TRP CE3 C Y N 342 TRP CZ2 C Y N 343 TRP CZ3 C Y N 344 TRP CH2 C Y N 345 TRP OXT O N N 346 TRP H H N N 347 TRP H2 H N N 348 TRP HA H N N 349 TRP HB2 H N N 350 TRP HB3 H N N 351 TRP HD1 H N N 352 TRP HE1 H N N 353 TRP HE3 H N N 354 TRP HZ2 H N N 355 TRP HZ3 H N N 356 TRP HH2 H N N 357 TRP HXT H N N 358 TYR N N N N 359 TYR CA C N S 360 TYR C C N N 361 TYR O O N N 362 TYR CB C N N 363 TYR CG C Y N 364 TYR CD1 C Y N 365 TYR CD2 C Y N 366 TYR CE1 C Y N 367 TYR CE2 C Y N 368 TYR CZ C Y N 369 TYR OH O N N 370 TYR OXT O N N 371 TYR H H N N 372 TYR H2 H N N 373 TYR HA H N N 374 TYR HB2 H N N 375 TYR HB3 H N N 376 TYR HD1 H N N 377 TYR HD2 H N N 378 TYR HE1 H N N 379 TYR HE2 H N N 380 TYR HH H N N 381 TYR HXT H N N 382 URE C C N N 383 URE O O N N 384 URE N1 N N N 385 URE N2 N N N 386 URE HN11 H N N 387 URE HN12 H N N 388 URE HN21 H N N 389 URE HN22 H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARF N C sing N N 13 ARF N HN1 sing N N 14 ARF N HN2 sing N N 15 ARF C O doub N N 16 ARF C H sing N N 17 ARG N CA sing N N 18 ARG N H sing N N 19 ARG N H2 sing N N 20 ARG CA C sing N N 21 ARG CA CB sing N N 22 ARG CA HA sing N N 23 ARG C O doub N N 24 ARG C OXT sing N N 25 ARG CB CG sing N N 26 ARG CB HB2 sing N N 27 ARG CB HB3 sing N N 28 ARG CG CD sing N N 29 ARG CG HG2 sing N N 30 ARG CG HG3 sing N N 31 ARG CD NE sing N N 32 ARG CD HD2 sing N N 33 ARG CD HD3 sing N N 34 ARG NE CZ sing N N 35 ARG NE HE sing N N 36 ARG CZ NH1 sing N N 37 ARG CZ NH2 doub N N 38 ARG NH1 HH11 sing N N 39 ARG NH1 HH12 sing N N 40 ARG NH2 HH21 sing N N 41 ARG NH2 HH22 sing N N 42 ARG OXT HXT sing N N 43 ASN N CA sing N N 44 ASN N H sing N N 45 ASN N H2 sing N N 46 ASN CA C sing N N 47 ASN CA CB sing N N 48 ASN CA HA sing N N 49 ASN C O doub N N 50 ASN C OXT sing N N 51 ASN CB CG sing N N 52 ASN CB HB2 sing N N 53 ASN CB HB3 sing N N 54 ASN CG OD1 doub N N 55 ASN CG ND2 sing N N 56 ASN ND2 HD21 sing N N 57 ASN ND2 HD22 sing N N 58 ASN OXT HXT sing N N 59 ASP N CA sing N N 60 ASP N H sing N N 61 ASP N H2 sing N N 62 ASP CA C sing N N 63 ASP CA CB sing N N 64 ASP CA HA sing N N 65 ASP C O doub N N 66 ASP C OXT sing N N 67 ASP CB CG sing N N 68 ASP CB HB2 sing N N 69 ASP CB HB3 sing N N 70 ASP CG OD1 doub N N 71 ASP CG OD2 sing N N 72 ASP OD2 HD2 sing N N 73 ASP OXT HXT sing N N 74 CYS N CA sing N N 75 CYS N H sing N N 76 CYS N H2 sing N N 77 CYS CA C sing N N 78 CYS CA CB sing N N 79 CYS CA HA sing N N 80 CYS C O doub N N 81 CYS C OXT sing N N 82 CYS CB SG sing N N 83 CYS CB HB2 sing N N 84 CYS CB HB3 sing N N 85 CYS SG HG sing N N 86 CYS OXT HXT sing N N 87 GLN N CA sing N N 88 GLN N H sing N N 89 GLN N H2 sing N N 90 GLN CA C sing N N 91 GLN CA CB sing N N 92 GLN CA HA sing N N 93 GLN C O doub N N 94 GLN C OXT sing N N 95 GLN CB CG sing N N 96 GLN CB HB2 sing N N 97 GLN CB HB3 sing N N 98 GLN CG CD sing N N 99 GLN CG HG2 sing N N 100 GLN CG HG3 sing N N 101 GLN CD OE1 doub N N 102 GLN CD NE2 sing N N 103 GLN NE2 HE21 sing N N 104 GLN NE2 HE22 sing N N 105 GLN OXT HXT sing N N 106 GLU N CA sing N N 107 GLU N H sing N N 108 GLU N H2 sing N N 109 GLU CA C sing N N 110 GLU CA CB sing N N 111 GLU CA HA sing N N 112 GLU C O doub N N 113 GLU C OXT sing N N 114 GLU CB CG sing N N 115 GLU CB HB2 sing N N 116 GLU CB HB3 sing N N 117 GLU CG CD sing N N 118 GLU CG HG2 sing N N 119 GLU CG HG3 sing N N 120 GLU CD OE1 doub N N 121 GLU CD OE2 sing N N 122 GLU OE2 HE2 sing N N 123 GLU OXT HXT sing N N 124 GLY N CA sing N N 125 GLY N H sing N N 126 GLY N H2 sing N N 127 GLY CA C sing N N 128 GLY CA HA2 sing N N 129 GLY CA HA3 sing N N 130 GLY C O doub N N 131 GLY C OXT sing N N 132 GLY OXT HXT sing N N 133 HIS N CA sing N N 134 HIS N H sing N N 135 HIS N H2 sing N N 136 HIS CA C sing N N 137 HIS CA CB sing N N 138 HIS CA HA sing N N 139 HIS C O doub N N 140 HIS C OXT sing N N 141 HIS CB CG sing N N 142 HIS CB HB2 sing N N 143 HIS CB HB3 sing N N 144 HIS CG ND1 sing Y N 145 HIS CG CD2 doub Y N 146 HIS ND1 CE1 doub Y N 147 HIS ND1 HD1 sing N N 148 HIS CD2 NE2 sing Y N 149 HIS CD2 HD2 sing N N 150 HIS CE1 NE2 sing Y N 151 HIS CE1 HE1 sing N N 152 HIS NE2 HE2 sing N N 153 HIS OXT HXT sing N N 154 HOH O H1 sing N N 155 HOH O H2 sing N N 156 ILE N CA sing N N 157 ILE N H sing N N 158 ILE N H2 sing N N 159 ILE CA C sing N N 160 ILE CA CB sing N N 161 ILE CA HA sing N N 162 ILE C O doub N N 163 ILE C OXT sing N N 164 ILE CB CG1 sing N N 165 ILE CB CG2 sing N N 166 ILE CB HB sing N N 167 ILE CG1 CD1 sing N N 168 ILE CG1 HG12 sing N N 169 ILE CG1 HG13 sing N N 170 ILE CG2 HG21 sing N N 171 ILE CG2 HG22 sing N N 172 ILE CG2 HG23 sing N N 173 ILE CD1 HD11 sing N N 174 ILE CD1 HD12 sing N N 175 ILE CD1 HD13 sing N N 176 ILE OXT HXT sing N N 177 LEU N CA sing N N 178 LEU N H sing N N 179 LEU N H2 sing N N 180 LEU CA C sing N N 181 LEU CA CB sing N N 182 LEU CA HA sing N N 183 LEU C O doub N N 184 LEU C OXT sing N N 185 LEU CB CG sing N N 186 LEU CB HB2 sing N N 187 LEU CB HB3 sing N N 188 LEU CG CD1 sing N N 189 LEU CG CD2 sing N N 190 LEU CG HG sing N N 191 LEU CD1 HD11 sing N N 192 LEU CD1 HD12 sing N N 193 LEU CD1 HD13 sing N N 194 LEU CD2 HD21 sing N N 195 LEU CD2 HD22 sing N N 196 LEU CD2 HD23 sing N N 197 LEU OXT HXT sing N N 198 LYS N CA sing N N 199 LYS N H sing N N 200 LYS N H2 sing N N 201 LYS CA C sing N N 202 LYS CA CB sing N N 203 LYS CA HA sing N N 204 LYS C O doub N N 205 LYS C OXT sing N N 206 LYS CB CG sing N N 207 LYS CB HB2 sing N N 208 LYS CB HB3 sing N N 209 LYS CG CD sing N N 210 LYS CG HG2 sing N N 211 LYS CG HG3 sing N N 212 LYS CD CE sing N N 213 LYS CD HD2 sing N N 214 LYS CD HD3 sing N N 215 LYS CE NZ sing N N 216 LYS CE HE2 sing N N 217 LYS CE HE3 sing N N 218 LYS NZ HZ1 sing N N 219 LYS NZ HZ2 sing N N 220 LYS NZ HZ3 sing N N 221 LYS OXT HXT sing N N 222 MET N CA sing N N 223 MET N H sing N N 224 MET N H2 sing N N 225 MET CA C sing N N 226 MET CA CB sing N N 227 MET CA HA sing N N 228 MET C O doub N N 229 MET C OXT sing N N 230 MET CB CG sing N N 231 MET CB HB2 sing N N 232 MET CB HB3 sing N N 233 MET CG SD sing N N 234 MET CG HG2 sing N N 235 MET CG HG3 sing N N 236 MET SD CE sing N N 237 MET CE HE1 sing N N 238 MET CE HE2 sing N N 239 MET CE HE3 sing N N 240 MET OXT HXT sing N N 241 PHE N CA sing N N 242 PHE N H sing N N 243 PHE N H2 sing N N 244 PHE CA C sing N N 245 PHE CA CB sing N N 246 PHE CA HA sing N N 247 PHE C O doub N N 248 PHE C OXT sing N N 249 PHE CB CG sing N N 250 PHE CB HB2 sing N N 251 PHE CB HB3 sing N N 252 PHE CG CD1 doub Y N 253 PHE CG CD2 sing Y N 254 PHE CD1 CE1 sing Y N 255 PHE CD1 HD1 sing N N 256 PHE CD2 CE2 doub Y N 257 PHE CD2 HD2 sing N N 258 PHE CE1 CZ doub Y N 259 PHE CE1 HE1 sing N N 260 PHE CE2 CZ sing Y N 261 PHE CE2 HE2 sing N N 262 PHE CZ HZ sing N N 263 PHE OXT HXT sing N N 264 PRO N CA sing N N 265 PRO N CD sing N N 266 PRO N H sing N N 267 PRO CA C sing N N 268 PRO CA CB sing N N 269 PRO CA HA sing N N 270 PRO C O doub N N 271 PRO C OXT sing N N 272 PRO CB CG sing N N 273 PRO CB HB2 sing N N 274 PRO CB HB3 sing N N 275 PRO CG CD sing N N 276 PRO CG HG2 sing N N 277 PRO CG HG3 sing N N 278 PRO CD HD2 sing N N 279 PRO CD HD3 sing N N 280 PRO OXT HXT sing N N 281 SER N CA sing N N 282 SER N H sing N N 283 SER N H2 sing N N 284 SER CA C sing N N 285 SER CA CB sing N N 286 SER CA HA sing N N 287 SER C O doub N N 288 SER C OXT sing N N 289 SER CB OG sing N N 290 SER CB HB2 sing N N 291 SER CB HB3 sing N N 292 SER OG HG sing N N 293 SER OXT HXT sing N N 294 SO4 S O1 doub N N 295 SO4 S O2 doub N N 296 SO4 S O3 sing N N 297 SO4 S O4 sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 URE C O doub N N 367 URE C N1 sing N N 368 URE C N2 sing N N 369 URE N1 HN11 sing N N 370 URE N1 HN12 sing N N 371 URE N2 HN21 sing N N 372 URE N2 HN22 sing N N 373 VAL N CA sing N N 374 VAL N H sing N N 375 VAL N H2 sing N N 376 VAL CA C sing N N 377 VAL CA CB sing N N 378 VAL CA HA sing N N 379 VAL C O doub N N 380 VAL C OXT sing N N 381 VAL CB CG1 sing N N 382 VAL CB CG2 sing N N 383 VAL CB HB sing N N 384 VAL CG1 HG11 sing N N 385 VAL CG1 HG12 sing N N 386 VAL CG1 HG13 sing N N 387 VAL CG2 HG21 sing N N 388 VAL CG2 HG22 sing N N 389 VAL CG2 HG23 sing N N 390 VAL OXT HXT sing N N 391 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BEB _pdbx_initial_refinement_model.details 'PDB ENTRY 1BEB' # _atom_sites.entry_id 4OMX _atom_sites.fract_transf_matrix[1][1] 0.010257 _atom_sites.fract_transf_matrix[1][2] 0.005922 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011844 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014745 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_