HEADER HYDROLASE 29-JAN-14 4ONZ TITLE CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSIDE HYDROLASE (BACOVA_02161) TITLE 2 FROM BACTEROIDES OVATUS ATCC 8483 AT 1.85 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE GLYCOSIDE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS; SOURCE 3 ORGANISM_TAXID: 411476; SOURCE 4 STRAIN: ATCC 8483; SOURCE 5 GENE: BACOVA_02161, ZP_02065187.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF04041 FAMILY, DUF377, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4ONZ 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 4ONZ 1 JRNL REVDAT 2 22-NOV-17 4ONZ 1 REMARK REVDAT 1 26-FEB-14 4ONZ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSIDE HYDROLASE JRNL TITL 2 (BACOVA_02161) FROM BACTEROIDES OVATUS ATCC 8483 AT 1.85 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 28082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1433 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1940 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2722 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.57000 REMARK 3 B22 (A**2) : 0.49000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.56000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.139 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.305 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2920 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2787 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3973 ; 1.413 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6464 ; 0.731 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 373 ; 3.627 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;27.800 ;24.681 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 502 ; 9.739 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;11.180 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 413 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3344 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 673 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1405 ; 1.606 ; 3.332 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1404 ; 1.606 ; 3.328 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1762 ; 2.561 ; 6.213 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 380 REMARK 3 ORIGIN FOR THE GROUP (A): 7.9700 7.8240 22.2650 REMARK 3 T TENSOR REMARK 3 T11: 0.0436 T22: 0.0526 REMARK 3 T33: 0.0078 T12: 0.0351 REMARK 3 T13: 0.0109 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.1926 L22: 0.7016 REMARK 3 L33: 0.4234 L12: -0.1019 REMARK 3 L13: 0.1765 L23: -0.0489 REMARK 3 S TENSOR REMARK 3 S11: 0.1011 S12: 0.1514 S13: 0.0197 REMARK 3 S21: -0.0321 S22: -0.0746 S23: -0.0361 REMARK 3 S31: 0.0086 S32: 0.0212 S33: -0.0265 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 6. AN UNKNOWN LIGAND (UNL) IS MODELED INTO THE REMARK 3 PUTATIVE ACTIVE SITE BASED ON A SIMILAR STRUCTURE WITH PDB CODE REMARK 3 3TAW. REMARK 4 REMARK 4 4ONZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97953,0.97899 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28087 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 29.521 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.62000 REMARK 200 R SYM FOR SHELL (I) : 0.62000 REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M LITHIUM CHLORIDE, 20.0% REMARK 280 POLYETHYLENE GLYCOL 6000, 0.1M CITRIC ACID PH 4.0, NANODROP, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.78750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.16550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.78750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.16550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 LEU A 24 REMARK 465 ASP A 25 REMARK 465 THR A 26 REMARK 465 ASN A 27 REMARK 465 GLN A 28 REMARK 465 GLU A 29 REMARK 465 LYS A 30 REMARK 465 GLN A 31 REMARK 465 ASP A 32 REMARK 465 SER A 95 REMARK 465 ALA A 96 REMARK 465 GLN A 97 REMARK 465 GLY A 98 REMARK 465 ILE A 99 REMARK 465 GLY A 100 REMARK 465 LYS A 101 REMARK 465 LYS A 381 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 373 OD2 ASP A 373 2555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 74 -156.30 -149.98 REMARK 500 ASN A 75 76.30 22.32 REMARK 500 LEU A 176 -3.50 74.12 REMARK 500 SER A 201 83.14 67.26 REMARK 500 ASN A 211 -1.66 89.23 REMARK 500 ASP A 264 58.46 -99.80 REMARK 500 GLU A 330 -34.70 -141.41 REMARK 500 GLU A 330 -34.83 -141.30 REMARK 500 GLU A 347 -12.76 -143.69 REMARK 500 SER A 365 -25.05 -147.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-419052 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 24-381 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4ONZ A 24 381 UNP A7LWF7 A7LWF7_BACOV 24 381 SEQADV 4ONZ GLY A 0 UNP A7LWF7 EXPRESSION TAG SEQRES 1 A 359 GLY LEU ASP THR ASN GLN GLU LYS GLN ASP ASN ASN TRP SEQRES 2 A 359 VAL ILE GLY PRO PHE LEU ARG PRO GLU GLY VAL ASN PRO SEQRES 3 A 359 VAL ILE SER PRO GLN PRO THR GLU PHE TYR CYS PRO MSE SEQRES 4 A 359 ARG LYS GLN GLN VAL LYS TRP GLU GLU SER ASP THR PHE SEQRES 5 A 359 ASN PRO ALA ALA THR VAL LYS ASP GLY LYS ILE VAL VAL SEQRES 6 A 359 LEU TYR ARG ALA GLU ASP ASN SER ALA GLN GLY ILE GLY SEQRES 7 A 359 LYS ARG THR SER ARG VAL GLY TYR ALA GLU SER LYS ASP SEQRES 8 A 359 GLY ILE GLU MSE LYS ARG LEU ASP ASN PRO VAL LEU PHE SEQRES 9 A 359 PRO ALA GLU ASP ASN PHE LYS ASP GLN ASP TRP PRO GLY SEQRES 10 A 359 GLY CYS GLU ASP PRO ARG VAL ALA MSE THR GLU ASP GLY SEQRES 11 A 359 LEU TYR VAL MSE LEU TYR THR ALA TRP ASN ARG LYS LYS SEQRES 12 A 359 ALA ARG LEU ALA VAL ALA THR SER ARG ASP LEU LYS ASN SEQRES 13 A 359 TRP THR LYS HIS GLY LEU ALA PHE ASP LYS ALA TYR ASN SEQRES 14 A 359 GLY ARG PHE ASN ASN LEU PHE CYS LYS SER GLY SER ILE SEQRES 15 A 359 LEU THR LYS LEU LYS GLY ASN GLN LEU VAL ILE ASP LYS SEQRES 16 A 359 VAL ASN GLY LYS TYR PHE MSE TYR TRP GLY GLU HIS ALA SEQRES 17 A 359 ILE TYR ALA ALA THR SER ASP ASN LEU ILE ASP TRP TYR SEQRES 18 A 359 PRO VAL LEU ASP GLU LYS ASN GLU LEU MSE LYS ILE ILE SEQRES 19 A 359 GLN PRO ARG LYS GLY HIS PHE ASP SER LEU LEU THR GLU SEQRES 20 A 359 CYS GLY PRO PRO ALA ILE ARG THR LYS HIS GLY ILE VAL SEQRES 21 A 359 LEU VAL TYR ASN GLY LYS ASN SER GLY LYS THR GLY ASP SEQRES 22 A 359 ALA ASN TYR PRO GLY ASN ALA TYR CYS ALA GLY GLN LEU SEQRES 23 A 359 LEU LEU ASP GLY ASN ASP PRO TYR LYS VAL LEU ASP ARG SEQRES 24 A 359 LEU ASP LYS PRO PHE PHE ALA PRO GLU ALA PRO PHE GLU SEQRES 25 A 359 LYS SER GLY GLN TYR LYS ASP GLY THR VAL PHE ILE GLU SEQRES 26 A 359 GLY LEU VAL TYR HIS LYS LYS LYS LEU TYR LEU TYR TYR SEQRES 27 A 359 GLY CYS ALA ASP SER GLN VAL ALA VAL ALA VAL CYS ASP SEQRES 28 A 359 ASP VAL LYS LYS LEU LYS THR LYS MODRES 4ONZ MSE A 61 MET SELENOMETHIONINE MODRES 4ONZ MSE A 117 MET SELENOMETHIONINE MODRES 4ONZ MSE A 148 MET SELENOMETHIONINE MODRES 4ONZ MSE A 156 MET SELENOMETHIONINE MODRES 4ONZ MSE A 224 MET SELENOMETHIONINE MODRES 4ONZ MSE A 253 MET SELENOMETHIONINE HET MSE A 61 8 HET MSE A 117 8 HET MSE A 148 8 HET MSE A 156 8 HET MSE A 224 8 HET MSE A 253 13 HET UNL A 400 6 HET CL A 401 1 HET CL A 402 1 HETNAM MSE SELENOMETHIONINE HETNAM UNL UNKNOWN LIGAND HETNAM CL CHLORIDE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *268(H2 O) HELIX 1 1 PHE A 132 TRP A 137 1 6 HELIX 2 2 LYS A 188 ARG A 193 1 6 HELIX 3 3 ALA A 331 LYS A 335 5 5 HELIX 4 4 VAL A 375 LYS A 379 5 5 SHEET 1 A 2 GLU A 56 CYS A 59 0 SHEET 2 A 2 GLN A 64 LYS A 67 -1 O VAL A 66 N PHE A 57 SHEET 1 B 4 ASP A 72 LYS A 81 0 SHEET 2 B 4 LYS A 84 GLU A 92 -1 O VAL A 86 N THR A 79 SHEET 3 B 4 SER A 104 SER A 111 -1 O ARG A 105 N ALA A 91 SHEET 4 B 4 LYS A 118 ARG A 119 -1 O LYS A 118 N GLU A 110 SHEET 1 C 4 GLY A 140 MSE A 148 0 SHEET 2 C 4 TYR A 154 TRP A 161 -1 O VAL A 155 N ALA A 147 SHEET 3 C 4 ALA A 166 SER A 173 -1 O ALA A 171 N MSE A 156 SHEET 4 C 4 THR A 180 LEU A 184 -1 O THR A 180 N THR A 172 SHEET 1 D 5 GLN A 212 ILE A 215 0 SHEET 2 D 5 GLY A 202 LYS A 209 -1 N LYS A 209 O GLN A 212 SHEET 3 D 5 ALA A 274 THR A 277 1 O ARG A 276 N THR A 206 SHEET 4 D 5 GLY A 280 LYS A 288 -1 O VAL A 282 N ILE A 275 SHEET 5 D 5 LEU A 267 CYS A 270 -1 N GLU A 269 O ASN A 286 SHEET 1 E 8 TYR A 243 PRO A 244 0 SHEET 2 E 8 TYR A 232 SER A 236 -1 N THR A 235 O TYR A 243 SHEET 3 E 8 TYR A 222 TRP A 226 -1 N TRP A 226 O TYR A 232 SHEET 4 E 8 GLY A 202 LYS A 209 -1 N SER A 203 O TYR A 225 SHEET 5 E 8 ALA A 274 THR A 277 1 O ARG A 276 N THR A 206 SHEET 6 E 8 GLY A 280 LYS A 288 -1 O VAL A 282 N ILE A 275 SHEET 7 E 8 TYR A 303 LEU A 310 -1 O LEU A 310 N ILE A 281 SHEET 8 E 8 VAL A 318 ARG A 321 -1 O LEU A 319 N LEU A 309 SHEET 1 F 3 VAL A 344 HIS A 352 0 SHEET 2 F 3 LYS A 355 CYS A 362 -1 O LYS A 355 N HIS A 352 SHEET 3 F 3 GLN A 366 CYS A 372 -1 O ALA A 370 N LEU A 358 LINK C PRO A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N ARG A 62 1555 1555 1.34 LINK C GLU A 116 N MSE A 117 1555 1555 1.33 LINK C MSE A 117 N LYS A 118 1555 1555 1.33 LINK C ALA A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N THR A 149 1555 1555 1.33 LINK C VAL A 155 N MSE A 156 1555 1555 1.33 LINK C MSE A 156 N LEU A 157 1555 1555 1.33 LINK C PHE A 223 N MSE A 224 1555 1555 1.33 LINK C MSE A 224 N TYR A 225 1555 1555 1.33 LINK C LEU A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N LYS A 254 1555 1555 1.33 CISPEP 1 GLY A 38 PRO A 39 0 1.13 CISPEP 2 ASN A 47 PRO A 48 0 0.19 CISPEP 3 TRP A 137 PRO A 138 0 -0.97 SITE 1 AC1 3 GLN A 65 GLN A 257 ARG A 321 SITE 1 AC2 1 ARG A 42 CRYST1 79.575 50.331 85.631 90.00 94.38 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012567 0.000000 0.000963 0.00000 SCALE2 0.000000 0.019868 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011712 0.00000