HEADER HYDROLASE 11-FEB-14 4ORD TITLE CRYSTAL STRUCTURE OF ZEBRA FISH THIOESTERASE SUPERFAMILY MEMBER 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOESTERASE SUPERFAMILY MEMBER 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 6-146; COMPND 5 SYNONYM: FTHEM2, UNCHARACTERIZED PROTEIN; COMPND 6 EC: 3.1.2.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRA FISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: ACOT13; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS HYDROLASE, HOTDOG, THIOESTERASE, ACYL-COA EXPDTA X-RAY DIFFRACTION AUTHOR S.S.YU,H.LI,F.GAO,H.XU,W.M.GONG REVDAT 2 08-NOV-23 4ORD 1 SEQADV REVDAT 1 11-FEB-15 4ORD 0 JRNL AUTH S.S.YU,H.LI,F.GAO,Y.WANG,L.Y.MIAO,J.ZHANG,H.XU,W.M.GONG JRNL TITL CRYSTAL STRUCTURE AND POTENTIAL PHYSIOLOGICAL ROLE OF ZEBRA JRNL TITL 2 FISH THIOESTERASE SUPERFAMILY MEMBER 2 (FTHEM2) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 48094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2569 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3453 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 180 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4116 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 311 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.085 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4202 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5666 ; 1.100 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 560 ; 5.192 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;40.763 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 796 ;14.323 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;15.419 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 686 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3004 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2734 ; 0.473 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4396 ; 0.943 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1468 ; 1.702 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1264 ; 2.814 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4434 -9.3781 11.1718 REMARK 3 T TENSOR REMARK 3 T11: 0.0556 T22: 0.0477 REMARK 3 T33: 0.0404 T12: -0.0319 REMARK 3 T13: -0.0038 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.5910 L22: 1.3346 REMARK 3 L33: 1.8885 L12: -0.0826 REMARK 3 L13: -0.0456 L23: -0.1767 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: -0.0291 S13: -0.0088 REMARK 3 S21: 0.0564 S22: -0.0586 S23: 0.0280 REMARK 3 S31: 0.2519 S32: -0.0390 S33: 0.0027 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 140 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1741 -8.2854 34.6947 REMARK 3 T TENSOR REMARK 3 T11: 0.0381 T22: 0.0543 REMARK 3 T33: 0.0394 T12: -0.0111 REMARK 3 T13: 0.0004 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.2042 L22: 1.4127 REMARK 3 L33: 2.3411 L12: -0.2325 REMARK 3 L13: -0.1711 L23: 0.0351 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: 0.0864 S13: 0.0094 REMARK 3 S21: 0.0180 S22: 0.0256 S23: -0.1030 REMARK 3 S31: 0.0992 S32: 0.2728 S33: 0.0230 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 3 C 140 REMARK 3 ORIGIN FOR THE GROUP (A): -19.1414 -15.3427 41.5880 REMARK 3 T TENSOR REMARK 3 T11: 0.0864 T22: 0.0927 REMARK 3 T33: 0.0379 T12: -0.0807 REMARK 3 T13: -0.0079 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 2.0341 L22: 0.7721 REMARK 3 L33: 1.3486 L12: 0.1574 REMARK 3 L13: -0.2230 L23: -0.0909 REMARK 3 S TENSOR REMARK 3 S11: -0.0939 S12: 0.1160 S13: -0.1298 REMARK 3 S21: -0.1264 S22: 0.0557 S23: 0.1198 REMARK 3 S31: 0.2554 S32: -0.3363 S33: 0.0382 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 3 D 140 REMARK 3 ORIGIN FOR THE GROUP (A): 6.145 17.941 9.102 REMARK 3 T TENSOR REMARK 3 T11: 0.0602 T22: 0.0461 REMARK 3 T33: 0.0888 T12: -0.0449 REMARK 3 T13: -0.0037 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.4342 L22: 1.7787 REMARK 3 L33: 1.3939 L12: 0.4079 REMARK 3 L13: 0.1484 L23: 0.2998 REMARK 3 S TENSOR REMARK 3 S11: 0.0351 S12: -0.0927 S13: 0.2534 REMARK 3 S21: 0.1190 S22: -0.0780 S23: -0.0861 REMARK 3 S31: -0.2318 S32: 0.1450 S33: 0.0429 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ORD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000084854. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9716 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50707 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.58800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2F0X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M AMMONIUM ACETATE, 0.1M BIS-TRIS, REMARK 280 17%(W/V) PEG10000, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.53200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.17500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.53200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.17500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -6.26682 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 96.38649 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 251 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 141 REMARK 465 LEU A 142 REMARK 465 GLU A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 141 REMARK 465 LEU B 142 REMARK 465 GLU B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 141 REMARK 465 LEU C 142 REMARK 465 GLU C 143 REMARK 465 HIS C 144 REMARK 465 HIS C 145 REMARK 465 HIS C 146 REMARK 465 HIS C 147 REMARK 465 HIS C 148 REMARK 465 HIS C 149 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 SER D 141 REMARK 465 LEU D 142 REMARK 465 GLU D 143 REMARK 465 HIS D 144 REMARK 465 HIS D 145 REMARK 465 HIS D 146 REMARK 465 HIS D 147 REMARK 465 HIS D 148 REMARK 465 HIS D 149 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET B 16 48.58 -88.41 REMARK 500 ALA B 17 -28.01 -159.16 REMARK 500 REMARK 500 REMARK: NULL DBREF 4ORD A 1 141 UNP F6P1Y9 F6P1Y9_DANRE 6 146 DBREF 4ORD B 1 141 UNP F6P1Y9 F6P1Y9_DANRE 6 146 DBREF 4ORD C 1 141 UNP F6P1Y9 F6P1Y9_DANRE 6 146 DBREF 4ORD D 1 141 UNP F6P1Y9 F6P1Y9_DANRE 6 146 SEQADV 4ORD LEU A 142 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD GLU A 143 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS A 144 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS A 145 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS A 146 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS A 147 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS A 148 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS A 149 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD LEU B 142 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD GLU B 143 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS B 144 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS B 145 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS B 146 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS B 147 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS B 148 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS B 149 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD LEU C 142 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD GLU C 143 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS C 144 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS C 145 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS C 146 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS C 147 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS C 148 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS C 149 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD LEU D 142 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD GLU D 143 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS D 144 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS D 145 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS D 146 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS D 147 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS D 148 UNP F6P1Y9 EXPRESSION TAG SEQADV 4ORD HIS D 149 UNP F6P1Y9 EXPRESSION TAG SEQRES 1 A 149 MET ALA SER LEU THR LEU ASN THR VAL LYS GLN ILE PHE SEQRES 2 A 149 ARG ALA MET ALA ASP SER PRO GLY PHE ASP ARG VAL LEU SEQRES 3 A 149 SER LYS VAL GLU VAL LEU SER ALA ALA PRO GLY LYS VAL SEQRES 4 A 149 VAL CYS GLU MET LYS VAL GLU GLU GLN HIS THR ASN ARG SEQRES 5 A 149 GLY GLY THR LEU HIS GLY GLY MET THR ALA THR LEU VAL SEQRES 6 A 149 ASP MET ILE SER THR MET ALA ILE MET TYR SER GLU ARG SEQRES 7 A 149 GLY ALA PRO GLY VAL SER VAL ASP MET ASN ILE THR TYR SEQRES 8 A 149 MET ASN ALA ALA LYS ILE GLY GLU ASP ILE LEU ILE THR SEQRES 9 A 149 ALA GLN VAL LEU LYS GLN GLY ARG THR LEU ALA PHE ALA SEQRES 10 A 149 THR VAL ASP LEU THR ASN LYS ALA ASN GLY LYS LEU ILE SEQRES 11 A 149 ALA GLN GLY ARG HIS THR LYS HIS LEU GLY SER LEU GLU SEQRES 12 A 149 HIS HIS HIS HIS HIS HIS SEQRES 1 B 149 MET ALA SER LEU THR LEU ASN THR VAL LYS GLN ILE PHE SEQRES 2 B 149 ARG ALA MET ALA ASP SER PRO GLY PHE ASP ARG VAL LEU SEQRES 3 B 149 SER LYS VAL GLU VAL LEU SER ALA ALA PRO GLY LYS VAL SEQRES 4 B 149 VAL CYS GLU MET LYS VAL GLU GLU GLN HIS THR ASN ARG SEQRES 5 B 149 GLY GLY THR LEU HIS GLY GLY MET THR ALA THR LEU VAL SEQRES 6 B 149 ASP MET ILE SER THR MET ALA ILE MET TYR SER GLU ARG SEQRES 7 B 149 GLY ALA PRO GLY VAL SER VAL ASP MET ASN ILE THR TYR SEQRES 8 B 149 MET ASN ALA ALA LYS ILE GLY GLU ASP ILE LEU ILE THR SEQRES 9 B 149 ALA GLN VAL LEU LYS GLN GLY ARG THR LEU ALA PHE ALA SEQRES 10 B 149 THR VAL ASP LEU THR ASN LYS ALA ASN GLY LYS LEU ILE SEQRES 11 B 149 ALA GLN GLY ARG HIS THR LYS HIS LEU GLY SER LEU GLU SEQRES 12 B 149 HIS HIS HIS HIS HIS HIS SEQRES 1 C 149 MET ALA SER LEU THR LEU ASN THR VAL LYS GLN ILE PHE SEQRES 2 C 149 ARG ALA MET ALA ASP SER PRO GLY PHE ASP ARG VAL LEU SEQRES 3 C 149 SER LYS VAL GLU VAL LEU SER ALA ALA PRO GLY LYS VAL SEQRES 4 C 149 VAL CYS GLU MET LYS VAL GLU GLU GLN HIS THR ASN ARG SEQRES 5 C 149 GLY GLY THR LEU HIS GLY GLY MET THR ALA THR LEU VAL SEQRES 6 C 149 ASP MET ILE SER THR MET ALA ILE MET TYR SER GLU ARG SEQRES 7 C 149 GLY ALA PRO GLY VAL SER VAL ASP MET ASN ILE THR TYR SEQRES 8 C 149 MET ASN ALA ALA LYS ILE GLY GLU ASP ILE LEU ILE THR SEQRES 9 C 149 ALA GLN VAL LEU LYS GLN GLY ARG THR LEU ALA PHE ALA SEQRES 10 C 149 THR VAL ASP LEU THR ASN LYS ALA ASN GLY LYS LEU ILE SEQRES 11 C 149 ALA GLN GLY ARG HIS THR LYS HIS LEU GLY SER LEU GLU SEQRES 12 C 149 HIS HIS HIS HIS HIS HIS SEQRES 1 D 149 MET ALA SER LEU THR LEU ASN THR VAL LYS GLN ILE PHE SEQRES 2 D 149 ARG ALA MET ALA ASP SER PRO GLY PHE ASP ARG VAL LEU SEQRES 3 D 149 SER LYS VAL GLU VAL LEU SER ALA ALA PRO GLY LYS VAL SEQRES 4 D 149 VAL CYS GLU MET LYS VAL GLU GLU GLN HIS THR ASN ARG SEQRES 5 D 149 GLY GLY THR LEU HIS GLY GLY MET THR ALA THR LEU VAL SEQRES 6 D 149 ASP MET ILE SER THR MET ALA ILE MET TYR SER GLU ARG SEQRES 7 D 149 GLY ALA PRO GLY VAL SER VAL ASP MET ASN ILE THR TYR SEQRES 8 D 149 MET ASN ALA ALA LYS ILE GLY GLU ASP ILE LEU ILE THR SEQRES 9 D 149 ALA GLN VAL LEU LYS GLN GLY ARG THR LEU ALA PHE ALA SEQRES 10 D 149 THR VAL ASP LEU THR ASN LYS ALA ASN GLY LYS LEU ILE SEQRES 11 D 149 ALA GLN GLY ARG HIS THR LYS HIS LEU GLY SER LEU GLU SEQRES 12 D 149 HIS HIS HIS HIS HIS HIS FORMUL 5 HOH *311(H2 O) HELIX 1 1 THR A 5 MET A 16 1 12 HELIX 2 2 GLY A 21 SER A 27 5 7 HELIX 3 3 GLU A 46 THR A 50 5 5 HELIX 4 4 HIS A 57 TYR A 75 1 19 HELIX 5 5 THR B 5 SER B 19 1 15 HELIX 6 6 GLY B 21 SER B 27 5 7 HELIX 7 7 GLU B 46 THR B 50 5 5 HELIX 8 8 HIS B 57 TYR B 75 1 19 HELIX 9 9 THR C 5 ASP C 18 1 14 HELIX 10 10 GLY C 21 SER C 27 5 7 HELIX 11 11 GLU C 46 THR C 50 5 5 HELIX 12 12 HIS C 57 TYR C 75 1 19 HELIX 13 13 THR D 5 ASP D 18 1 14 HELIX 14 14 GLY D 21 SER D 27 5 7 HELIX 15 15 GLU D 46 THR D 50 5 5 HELIX 16 16 HIS D 57 TYR D 75 1 19 SHEET 1 A 6 GLU A 30 ALA A 35 0 SHEET 2 A 6 LYS A 38 LYS A 44 -1 O GLU A 42 N GLU A 30 SHEET 3 A 6 ASP A 100 GLN A 110 -1 O ILE A 101 N MET A 43 SHEET 4 A 6 LEU A 114 ASN A 123 -1 O ASP A 120 N THR A 104 SHEET 5 A 6 LEU A 129 HIS A 138 -1 O ILE A 130 N LEU A 121 SHEET 6 A 6 VAL A 83 TYR A 91 -1 N VAL A 83 O HIS A 138 SHEET 1 B 6 GLU B 30 ALA B 35 0 SHEET 2 B 6 LYS B 38 LYS B 44 -1 O GLU B 42 N GLU B 30 SHEET 3 B 6 ASP B 100 GLN B 110 -1 O ILE B 101 N MET B 43 SHEET 4 B 6 LEU B 114 ASN B 123 -1 O PHE B 116 N LEU B 108 SHEET 5 B 6 LEU B 129 HIS B 138 -1 O LYS B 137 N ALA B 115 SHEET 6 B 6 VAL B 83 TYR B 91 -1 N VAL B 83 O HIS B 138 SHEET 1 C 6 GLU C 30 ALA C 35 0 SHEET 2 C 6 LYS C 38 LYS C 44 -1 O LYS C 38 N ALA C 35 SHEET 3 C 6 ASP C 100 GLN C 110 -1 O ILE C 101 N MET C 43 SHEET 4 C 6 LEU C 114 ASN C 123 -1 O THR C 122 N LEU C 102 SHEET 5 C 6 LEU C 129 HIS C 138 -1 O LYS C 137 N ALA C 115 SHEET 6 C 6 VAL C 83 TYR C 91 -1 N ASP C 86 O THR C 136 SHEET 1 D 6 GLU D 30 ALA D 35 0 SHEET 2 D 6 LYS D 38 LYS D 44 -1 O LYS D 38 N ALA D 35 SHEET 3 D 6 ASP D 100 GLN D 110 -1 O ILE D 101 N MET D 43 SHEET 4 D 6 LEU D 114 ASN D 123 -1 O THR D 122 N LEU D 102 SHEET 5 D 6 LEU D 129 HIS D 138 -1 O LYS D 137 N ALA D 115 SHEET 6 D 6 VAL D 83 TYR D 91 -1 N VAL D 83 O HIS D 138 CRYST1 77.064 74.350 96.590 90.00 93.72 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012976 0.000000 0.000843 0.00000 SCALE2 0.000000 0.013450 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010375 0.00000