HEADER TRANSFERASE/TRANSFERASE INHIBITOR 13-FEB-14 4OTF TITLE CRYSTAL STRUCTURE OF THE KINASE DOMAIN OF BRUTON'S TYROSINE KINASE TITLE 2 WITH GDC0834 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE BTK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: AGAMMAGLOBULINEMIA TYROSINE KINASE, ATK, B-CELL PROGENITOR COMPND 6 KINASE, BPK, BRUTON TYROSINE KINASE; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AGMX1, ATK, BPK, BTK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBACGUS KEYWDS KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.G.HYMOWITZ,B.MAURER REVDAT 4 06-DEC-23 4OTF 1 REMARK REVDAT 3 20-SEP-23 4OTF 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK REVDAT 2 01-APR-15 4OTF 1 JRNL REVDAT 1 28-JAN-15 4OTF 0 JRNL AUTH W.B.YOUNG,J.BARBOSA,P.BLOMGREN,M.C.BREMER,J.J.CRAWFORD, JRNL AUTH 2 D.DAMBACH,S.GALLION,S.G.HYMOWITZ,J.E.KROPF,S.H.LEE,L.LIU, JRNL AUTH 3 J.W.LUBACH,J.MACALUSO,P.MACIEJEWSKI,B.MAURER,S.A.MITCHELL, JRNL AUTH 4 D.F.ORTWINE,J.DI PAOLO,K.REIF,H.SCHEERENS,A.SCHMITT, JRNL AUTH 5 C.G.SOWELL,X.WANG,H.WONG,J.M.XIONG,J.XU,Z.ZHAO,K.S.CURRIE JRNL TITL POTENT AND SELECTIVE BRUTON'S TYROSINE KINASE INHIBITORS: JRNL TITL 2 DISCOVERY OF GDC-0834. JRNL REF BIOORG.MED.CHEM.LETT. V. 25 1333 2015 JRNL REFN ISSN 0960-894X JRNL PMID 25701252 JRNL DOI 10.1016/J.BMCL.2015.01.032 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 20861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1053 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 25 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1121 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2158 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 182 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32000 REMARK 3 B22 (A**2) : 0.32000 REMARK 3 B33 (A**2) : -0.48000 REMARK 3 B12 (A**2) : 0.16000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.778 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2286 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3095 ; 1.464 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 270 ; 5.781 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;29.449 ;24.057 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 417 ;12.579 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;14.351 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 326 ; 0.149 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1724 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 396 A 657 REMARK 3 ORIGIN FOR THE GROUP (A): -35.2128 20.9985 -0.6087 REMARK 3 T TENSOR REMARK 3 T11: 0.0208 T22: 0.0115 REMARK 3 T33: 0.0032 T12: 0.0042 REMARK 3 T13: 0.0053 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.4079 L22: 0.7043 REMARK 3 L33: 0.4729 L12: 0.1513 REMARK 3 L13: -0.0331 L23: -0.2076 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: -0.0526 S13: 0.0099 REMARK 3 S21: 0.0538 S22: -0.0068 S23: 0.0200 REMARK 3 S31: 0.0155 S32: 0.0403 S33: 0.0241 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4OTF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000084925. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97787 REMARK 200 MONOCHROMATOR : SI (220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20873 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11600 REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.49000 REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB CODE 3OCS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL PROTEIN SOLUTION (8.1 MG/ML IN 10 REMARK 280 MM TRIS PH 8.5, 100 MM NACL, 0.5 MM TCEP, 1 MM GDC0834) AND 1 UL REMARK 280 RESERVOIR SOLUTION OF 14% PEG 4000, 0.2 M AMMONIUM SULFATE, 0.1 REMARK 280 M NA ACETATE-ACETATE PH 5.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 14.07367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.14733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.11050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.18417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 7.03683 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 392 REMARK 465 GLY A 393 REMARK 465 SER A 394 REMARK 465 TRP A 395 REMARK 465 LEU A 659 REMARK 465 TYR A 660 REMARK 465 GLY A 661 REMARK 465 ASN A 662 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 520 -16.44 83.51 REMARK 500 ASP A 521 51.34 -143.92 REMARK 500 ASP A 548 104.71 -175.90 REMARK 500 ARG A 600 -9.24 74.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2VL A 704 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3OCS RELATED DB: PDB REMARK 900 RELATED ID: 3OCT RELATED DB: PDB REMARK 900 RELATED ID: 3P03 RELATED DB: PDB DBREF 4OTF A 393 657 UNP Q06187 BTK_HUMAN 393 657 SEQADV 4OTF MET A 392 UNP Q06187 INITIATING METHIONINE SEQADV 4OTF ASN A 658 UNP Q06187 EXPRESSION TAG SEQADV 4OTF LEU A 659 UNP Q06187 EXPRESSION TAG SEQADV 4OTF TYR A 660 UNP Q06187 EXPRESSION TAG SEQADV 4OTF GLY A 661 UNP Q06187 EXPRESSION TAG SEQADV 4OTF ASN A 662 UNP Q06187 EXPRESSION TAG SEQRES 1 A 271 MET GLY SER TRP GLU ILE ASP PRO LYS ASP LEU THR PHE SEQRES 2 A 271 LEU LYS GLU LEU GLY THR GLY GLN PHE GLY VAL VAL LYS SEQRES 3 A 271 TYR GLY LYS TRP ARG GLY GLN TYR ASP VAL ALA ILE LYS SEQRES 4 A 271 MET ILE LYS GLU GLY SER MET SER GLU ASP GLU PHE ILE SEQRES 5 A 271 GLU GLU ALA LYS VAL MET MET ASN LEU SER HIS GLU LYS SEQRES 6 A 271 LEU VAL GLN LEU TYR GLY VAL CYS THR LYS GLN ARG PRO SEQRES 7 A 271 ILE PHE ILE ILE THR GLU TYR MET ALA ASN GLY OCS LEU SEQRES 8 A 271 LEU ASN TYR LEU ARG GLU MET ARG HIS ARG PHE GLN THR SEQRES 9 A 271 GLN GLN LEU LEU GLU MET CYS LYS ASP VAL CYS GLU ALA SEQRES 10 A 271 MET GLU TYR LEU GLU SER LYS GLN PHE LEU HIS ARG ASP SEQRES 11 A 271 LEU ALA ALA ARG ASN CYS LEU VAL ASN ASP GLN GLY VAL SEQRES 12 A 271 VAL LYS VAL SER ASP PHE GLY LEU SER ARG TYR VAL LEU SEQRES 13 A 271 ASP ASP GLU TYR THR SER SER VAL GLY SER LYS PHE PRO SEQRES 14 A 271 VAL ARG TRP SER PRO PRO GLU VAL LEU MET TYR SER LYS SEQRES 15 A 271 PHE SER SER LYS SER ASP ILE TRP ALA PHE GLY VAL LEU SEQRES 16 A 271 MET TRP GLU ILE TYR SER LEU GLY LYS MET PRO TYR GLU SEQRES 17 A 271 ARG PHE THR ASN SER GLU THR ALA GLU HIS ILE ALA GLN SEQRES 18 A 271 GLY LEU ARG LEU TYR ARG PRO HIS LEU ALA SER GLU LYS SEQRES 19 A 271 VAL TYR THR ILE MET TYR SER CYS TRP HIS GLU LYS ALA SEQRES 20 A 271 ASP GLU ARG PRO THR PHE LYS ILE LEU LEU SER ASN ILE SEQRES 21 A 271 LEU ASP VAL MET ASP GLU ASN LEU TYR GLY ASN MODRES 4OTF OCS A 481 CYS CYSTEINESULFONIC ACID HET OCS A 481 9 HET SO4 A 701 5 HET SO4 A 702 5 HET SO4 A 703 5 HET 2VL A 704 43 HETNAM OCS CYSTEINESULFONIC ACID HETNAM SO4 SULFATE ION HETNAM 2VL N-{3-[6-({4-[(2R)-1,4-DIMETHYL-3-OXOPIPERAZIN-2- HETNAM 2 2VL YL]PHENYL}AMINO)-4-METHYL-5-OXO-4,5-DIHYDROPYRAZIN-2- HETNAM 3 2VL YL]-2-METHYLPHENYL }-4,5,6,7-TETRAHYDRO-1- HETNAM 4 2VL BENZOTHIOPHENE-2-CARBOXAMIDE HETSYN 2VL GDC0834 FORMUL 1 OCS C3 H7 N O5 S FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 2VL C33 H36 N6 O3 S FORMUL 6 HOH *182(H2 O) HELIX 1 1 ASP A 398 LYS A 400 5 3 HELIX 2 2 SER A 438 ALA A 446 1 9 HELIX 3 3 ALA A 446 LEU A 452 1 7 HELIX 4 4 OCS A 481 MET A 489 1 9 HELIX 5 5 GLN A 494 LYS A 515 1 22 HELIX 6 6 ALA A 523 ARG A 525 5 3 HELIX 7 7 GLY A 541 VAL A 546 5 6 HELIX 8 8 ASP A 548 SER A 553 1 6 HELIX 9 9 PRO A 560 SER A 564 5 5 HELIX 10 10 PRO A 565 SER A 572 1 8 HELIX 11 11 SER A 575 SER A 592 1 18 HELIX 12 12 THR A 602 GLN A 612 1 11 HELIX 13 13 SER A 623 CYS A 633 1 11 HELIX 14 14 LYS A 637 ARG A 641 5 5 HELIX 15 15 THR A 643 ASN A 658 1 16 SHEET 1 A 5 LEU A 402 GLY A 411 0 SHEET 2 A 5 GLY A 414 TRP A 421 -1 O TYR A 418 N LYS A 406 SHEET 3 A 5 TYR A 425 MET A 431 -1 O ILE A 429 N LYS A 417 SHEET 4 A 5 PHE A 471 GLU A 475 -1 O ILE A 472 N LYS A 430 SHEET 5 A 5 LEU A 460 CYS A 464 -1 N GLY A 462 O ILE A 473 SHEET 1 B 2 CYS A 527 VAL A 529 0 SHEET 2 B 2 VAL A 535 VAL A 537 -1 O LYS A 536 N LEU A 528 LINK C GLY A 480 N OCS A 481 1555 1555 1.33 LINK C OCS A 481 N LEU A 482 1555 1555 1.33 CISPEP 1 ARG A 468 PRO A 469 0 -2.24 SITE 1 AC1 5 LYS A 466 ARG A 487 ARG A 490 LYS A 595 SITE 2 AC1 5 HOH A 831 SITE 1 AC2 3 ARG A 490 HIS A 491 LYS A 637 SITE 1 AC3 7 SER A 592 LYS A 595 TYR A 617 PRO A 619 SITE 2 AC3 7 HIS A 620 HOH A 823 HOH A 911 SITE 1 AC4 21 LYS A 406 GLU A 407 LEU A 408 THR A 410 SITE 2 AC4 21 PHE A 413 VAL A 416 ALA A 428 LYS A 430 SITE 3 AC4 21 THR A 474 GLU A 475 TYR A 476 MET A 477 SITE 4 AC4 21 GLY A 480 ASN A 526 LEU A 528 ASP A 539 SITE 5 AC4 21 TYR A 551 HOH A 810 HOH A 884 HOH A 889 SITE 6 AC4 21 HOH A 895 CRYST1 108.507 108.507 42.221 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009216 0.005321 0.000000 0.00000 SCALE2 0.000000 0.010642 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023685 0.00000