HEADER ISOMERASE 01-FEB-14 4OWG TITLE CRYSTAL STRUCTURE OF RABBIT MUSCLE TRIOSEPHOSPHATE ISOMERASE-PEP TITLE 2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TIM, TRIOSE-PHOSPHATE ISOMERASE; COMPND 5 EC: 5.3.1.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 TISSUE: MUSCLE KEYWDS TRIOSE-PHOSPHATE ISOMERASE, PEP, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.DU,B.LUISI REVDAT 5 27-SEP-23 4OWG 1 REMARK REVDAT 4 27-SEP-17 4OWG 1 HEADER SOURCE JRNL REMARK REVDAT 4 2 1 DBREF REVDAT 3 30-JUL-14 4OWG 1 REMARK SITE REVDAT 2 12-MAR-14 4OWG 1 AUTHOR REMARK REVDAT 1 05-MAR-14 4OWG 0 JRNL AUTH D.DU,B.LUISI JRNL TITL CRYSTAL STRUCTURE OF RABBIT MUSCLE TRIOSEPHOSPHATE JRNL TITL 2 ISOMERASE-PEP COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 55957 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2987 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3822 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 206 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3713 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.088 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.090 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.060 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.729 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3810 ; 0.020 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3693 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5164 ; 1.905 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8514 ; 2.405 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 493 ; 5.945 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 153 ;40.959 ;25.163 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 654 ;12.148 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.247 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 585 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4336 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 820 ; 0.015 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1969 ; 1.676 ; 1.454 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1968 ; 1.676 ; 1.452 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2460 ; 2.335 ; 2.178 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2461 ; 2.335 ; 2.179 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1841 ; 2.595 ; 1.722 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1840 ; 2.595 ; 1.722 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2703 ; 3.965 ; 2.465 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 17340 ; 4.820 ;14.589 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 16959 ; 4.722 ;14.376 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4OWG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000200129. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.0.9 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59113 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 43.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: 1R2R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH: 6.5, 25% PEG 8000, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.42400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.60200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.03550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.60200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.42400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.03550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 PRO A 2 REMARK 465 ALA B 1 REMARK 465 PRO B 2 REMARK 465 GLN B 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 456 O HOH B 578 0.92 REMARK 500 O HOH A 401 O HOH A 481 1.37 REMARK 500 N GLY A 214 OE2 GLU A 239 1.69 REMARK 500 O ALA B 35 O HOH B 580 1.71 REMARK 500 OE1 GLU A 135 O HOH A 401 1.95 REMARK 500 CE LYS A 174 O HOH A 415 2.08 REMARK 500 N GLU B 219 O HOH B 561 2.11 REMARK 500 O HOH A 424 O HOH A 427 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 404 O HOH A 472 4555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 49 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 99 NE - CZ - NH2 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 189 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP B 106 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 13 -143.11 48.65 REMARK 500 TYR A 67 -169.50 -108.63 REMARK 500 VAL A 196 -82.33 -121.41 REMARK 500 LYS B 13 -142.41 44.85 REMARK 500 TYR B 67 -169.94 -108.88 REMARK 500 ASP B 156 92.02 -164.21 REMARK 500 VAL B 196 -79.11 -124.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEP B 301 DBREF 4OWG A 1 248 UNP P00939 TPIS_RABIT 1 248 DBREF 4OWG B 1 248 UNP P00939 TPIS_RABIT 1 248 SEQRES 1 A 248 ALA PRO SER ARG LYS PHE PHE VAL GLY GLY ASN TRP LYS SEQRES 2 A 248 MET ASN GLY ARG LYS LYS ASN LEU GLY GLU LEU ILE THR SEQRES 3 A 248 THR LEU ASN ALA ALA LYS VAL PRO ALA ASP THR GLU VAL SEQRES 4 A 248 VAL CYS ALA PRO PRO THR ALA TYR ILE ASP PHE ALA ARG SEQRES 5 A 248 GLN LYS LEU ASP PRO LYS ILE ALA VAL ALA ALA GLN ASN SEQRES 6 A 248 CYS TYR LYS VAL THR ASN GLY ALA PHE THR GLY GLU ILE SEQRES 7 A 248 SER PRO GLY MET ILE LYS ASP CYS GLY ALA THR TRP VAL SEQRES 8 A 248 VAL LEU GLY HIS SER GLU ARG ARG HIS VAL PHE GLY GLU SEQRES 9 A 248 SER ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS ALA LEU SEQRES 10 A 248 SER GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY GLU LYS SEQRES 11 A 248 LEU ASP GLU ARG GLU ALA GLY ILE THR GLU LYS VAL VAL SEQRES 12 A 248 PHE GLU GLN THR LYS VAL ILE ALA ASP ASN VAL LYS ASP SEQRES 13 A 248 TRP SER LYS VAL VAL LEU ALA TYR GLU PRO VAL TRP ALA SEQRES 14 A 248 ILE GLY THR GLY LYS THR ALA THR PRO GLN GLN ALA GLN SEQRES 15 A 248 GLU VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SER ASN SEQRES 16 A 248 VAL SER ASP ALA VAL ALA GLN SER THR ARG ILE ILE TYR SEQRES 17 A 248 GLY GLY SER VAL THR GLY ALA THR CYS LYS GLU LEU ALA SEQRES 18 A 248 SER GLN PRO ASP VAL ASP GLY PHE LEU VAL GLY GLY ALA SEQRES 19 A 248 SER LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN ALA LYS SEQRES 20 A 248 GLN SEQRES 1 B 248 ALA PRO SER ARG LYS PHE PHE VAL GLY GLY ASN TRP LYS SEQRES 2 B 248 MET ASN GLY ARG LYS LYS ASN LEU GLY GLU LEU ILE THR SEQRES 3 B 248 THR LEU ASN ALA ALA LYS VAL PRO ALA ASP THR GLU VAL SEQRES 4 B 248 VAL CYS ALA PRO PRO THR ALA TYR ILE ASP PHE ALA ARG SEQRES 5 B 248 GLN LYS LEU ASP PRO LYS ILE ALA VAL ALA ALA GLN ASN SEQRES 6 B 248 CYS TYR LYS VAL THR ASN GLY ALA PHE THR GLY GLU ILE SEQRES 7 B 248 SER PRO GLY MET ILE LYS ASP CYS GLY ALA THR TRP VAL SEQRES 8 B 248 VAL LEU GLY HIS SER GLU ARG ARG HIS VAL PHE GLY GLU SEQRES 9 B 248 SER ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS ALA LEU SEQRES 10 B 248 SER GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY GLU LYS SEQRES 11 B 248 LEU ASP GLU ARG GLU ALA GLY ILE THR GLU LYS VAL VAL SEQRES 12 B 248 PHE GLU GLN THR LYS VAL ILE ALA ASP ASN VAL LYS ASP SEQRES 13 B 248 TRP SER LYS VAL VAL LEU ALA TYR GLU PRO VAL TRP ALA SEQRES 14 B 248 ILE GLY THR GLY LYS THR ALA THR PRO GLN GLN ALA GLN SEQRES 15 B 248 GLU VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SER ASN SEQRES 16 B 248 VAL SER ASP ALA VAL ALA GLN SER THR ARG ILE ILE TYR SEQRES 17 B 248 GLY GLY SER VAL THR GLY ALA THR CYS LYS GLU LEU ALA SEQRES 18 B 248 SER GLN PRO ASP VAL ASP GLY PHE LEU VAL GLY GLY ALA SEQRES 19 B 248 SER LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN ALA LYS SEQRES 20 B 248 GLN HET PEP A 301 10 HET PEP B 301 10 HETNAM PEP PHOSPHOENOLPYRUVATE FORMUL 3 PEP 2(C3 H5 O6 P) FORMUL 5 HOH *425(H2 O) HELIX 1 AA1 ARG A 17 ALA A 30 1 14 HELIX 2 AA2 PRO A 44 ALA A 46 5 3 HELIX 3 AA3 TYR A 47 LEU A 55 1 9 HELIX 4 AA4 SER A 79 CYS A 86 1 8 HELIX 5 AA5 HIS A 95 VAL A 101 1 7 HELIX 6 AA6 SER A 105 GLU A 119 1 15 HELIX 7 AA7 LYS A 130 ALA A 136 1 7 HELIX 8 AA8 ILE A 138 ASN A 153 1 16 HELIX 9 AA9 ASP A 156 SER A 158 5 3 HELIX 10 AB1 PRO A 166 ILE A 170 5 5 HELIX 11 AB2 THR A 177 VAL A 196 1 20 HELIX 12 AB3 SER A 197 THR A 204 1 8 HELIX 13 AB4 THR A 216 SER A 222 1 7 HELIX 14 AB5 GLY A 232 LYS A 237 5 6 HELIX 15 AB6 PRO A 238 ASN A 245 1 8 HELIX 16 AB7 ARG B 17 ALA B 30 1 14 HELIX 17 AB8 PRO B 44 ALA B 46 5 3 HELIX 18 AB9 TYR B 47 LEU B 55 1 9 HELIX 19 AC1 SER B 79 CYS B 86 1 8 HELIX 20 AC2 HIS B 95 VAL B 101 1 7 HELIX 21 AC3 SER B 105 GLU B 119 1 15 HELIX 22 AC4 LYS B 130 ALA B 136 1 7 HELIX 23 AC5 ILE B 138 ASN B 153 1 16 HELIX 24 AC6 ASP B 156 SER B 158 5 3 HELIX 25 AC7 PRO B 166 ILE B 170 5 5 HELIX 26 AC8 THR B 177 VAL B 196 1 20 HELIX 27 AC9 SER B 197 THR B 204 1 8 HELIX 28 AD1 THR B 216 SER B 222 1 7 HELIX 29 AD2 GLY B 232 LYS B 237 5 6 HELIX 30 AD3 PRO B 238 ASN B 245 1 8 SHEET 1 AA1 9 PHE A 6 ASN A 11 0 SHEET 2 AA1 9 THR A 37 ALA A 42 1 O ALA A 42 N GLY A 10 SHEET 3 AA1 9 ALA A 60 ALA A 63 1 O ALA A 60 N CYS A 41 SHEET 4 AA1 9 TRP A 90 LEU A 93 1 O VAL A 92 N ALA A 63 SHEET 5 AA1 9 GLY A 122 ILE A 127 1 O ILE A 124 N VAL A 91 SHEET 6 AA1 9 VAL A 160 TYR A 164 1 O ALA A 163 N ALA A 125 SHEET 7 AA1 9 ARG A 205 GLY A 209 1 O ILE A 207 N TYR A 164 SHEET 8 AA1 9 GLY A 228 VAL A 231 1 O GLY A 228 N TYR A 208 SHEET 9 AA1 9 PHE A 6 ASN A 11 1 N GLY A 9 O PHE A 229 SHEET 1 AA2 9 PHE B 6 ASN B 11 0 SHEET 2 AA2 9 THR B 37 ALA B 42 1 O ALA B 42 N GLY B 10 SHEET 3 AA2 9 ALA B 60 ALA B 63 1 O ALA B 60 N CYS B 41 SHEET 4 AA2 9 TRP B 90 LEU B 93 1 O VAL B 92 N ALA B 63 SHEET 5 AA2 9 GLY B 122 ILE B 127 1 O ILE B 124 N LEU B 93 SHEET 6 AA2 9 VAL B 160 TYR B 164 1 O ALA B 163 N ALA B 125 SHEET 7 AA2 9 ILE B 206 GLY B 209 1 O ILE B 207 N LEU B 162 SHEET 8 AA2 9 GLY B 228 VAL B 231 1 O GLY B 228 N TYR B 208 SHEET 9 AA2 9 PHE B 6 ASN B 11 1 N GLY B 9 O PHE B 229 SITE 1 AC1 16 ASN A 11 LYS A 13 HIS A 95 GLU A 165 SITE 2 AC1 16 ALA A 169 ILE A 170 GLY A 171 GLY A 210 SITE 3 AC1 16 SER A 211 LEU A 230 GLY A 232 GLY A 233 SITE 4 AC1 16 HOH A 419 HOH A 512 HOH A 516 HOH A 524 SITE 1 AC2 16 ASN B 11 LYS B 13 HIS B 95 GLU B 165 SITE 2 AC2 16 ALA B 169 ILE B 170 GLY B 171 GLY B 209 SITE 3 AC2 16 GLY B 210 SER B 211 GLY B 232 GLY B 233 SITE 4 AC2 16 HOH B 406 HOH B 467 HOH B 472 HOH B 499 CRYST1 36.848 72.071 161.204 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027139 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013875 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006203 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.999892 0.009618 0.011097 16.88495 1 MTRIX2 2 0.006578 -0.382239 0.924040 -35.73310 1 MTRIX3 2 0.013129 0.924013 0.382135 23.72869 1