HEADER TRANSCRIPTION 04-FEB-14 4OX0 TITLE CRYSTAL STRUCTURE OF THE KERATIN-LIKE DOMAIN FROM THE MADS TITLE 2 TRANSCRIPTION FACTOR SEPALLATA 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEVELOPMENTAL PROTEIN SEPALLATA 3; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: AGAMOUS-LIKE MADS-BOX PROTEIN AGL9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AGL9,AT1G24260,F3I6.19,SEP3,SEP3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PESPRIT KEYWDS COILED-COIL, OLIGOMERIZATION DOMAIN, KERATIN-LIKE DOMAIN, AMPHIPATHIC KEYWDS 2 ALPHA HELIX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.ZUBIETA,C.ACAJJAOUI REVDAT 5 27-DEC-23 4OX0 1 REMARK REVDAT 4 01-NOV-17 4OX0 1 REMARK REVDAT 3 27-SEP-17 4OX0 1 SOURCE JRNL REMARK REVDAT 2 12-NOV-14 4OX0 1 JRNL REVDAT 1 22-OCT-14 4OX0 0 JRNL AUTH S.PURANIK,S.ACAJJAOUI,S.CONN,L.COSTA,V.CONN,A.VIAL, JRNL AUTH 2 R.MARCELLIN,R.MELZER,E.BROWN,D.HART,G.THEIEN,C.S.SILVA, JRNL AUTH 3 F.PARCY,R.DUMAS,M.NANAO,C.ZUBIETA JRNL TITL STRUCTURAL BASIS FOR THE OLIGOMERIZATION OF THE MADS DOMAIN JRNL TITL 2 TRANSCRIPTION FACTOR SEPALLATA3 IN ARABIDOPSIS. JRNL REF PLANT CELL V. 26 3603 2014 JRNL REFN ESSN 1532-298X JRNL PMID 25228343 JRNL DOI 10.1105/TPC.114.127910 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 23731 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1217 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.60 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 935 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2811 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 891 REMARK 3 BIN R VALUE (WORKING SET) : 0.2778 REMARK 3 BIN FREE R VALUE : 0.3458 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.71 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 44 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2965 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 262 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.35670 REMARK 3 B22 (A**2) : -11.30070 REMARK 3 B33 (A**2) : 20.65740 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.533 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.879 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.859 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2992 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4003 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1209 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 108 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 411 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2992 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 383 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3540 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.25 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.85 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.74 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 19.0962 137.9750 54.8141 REMARK 3 T TENSOR REMARK 3 T11: -0.5768 T22: -0.3980 REMARK 3 T33: 0.0442 T12: 0.0546 REMARK 3 T13: -0.0759 T23: -0.1360 REMARK 3 L TENSOR REMARK 3 L11: 1.9016 L22: 0.3204 REMARK 3 L33: 1.8858 L12: -0.1252 REMARK 3 L13: -0.1269 L23: -0.0480 REMARK 3 S TENSOR REMARK 3 S11: -0.0591 S12: 0.4122 S13: -0.3488 REMARK 3 S21: 0.3280 S22: 0.0696 S23: -0.1511 REMARK 3 S31: 0.3382 S32: 0.5837 S33: -0.0105 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 0.8644 162.1590 75.0357 REMARK 3 T TENSOR REMARK 3 T11: -0.3818 T22: -0.5272 REMARK 3 T33: 0.0854 T12: 0.1033 REMARK 3 T13: -0.0047 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 1.3059 L22: 2.2275 REMARK 3 L33: 0.4382 L12: -0.8060 REMARK 3 L13: 0.5234 L23: 0.4752 REMARK 3 S TENSOR REMARK 3 S11: -0.2031 S12: -0.0380 S13: 0.3480 REMARK 3 S21: 0.5135 S22: 0.0986 S23: 0.0870 REMARK 3 S31: -0.2546 S32: -0.1497 S33: 0.1045 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 15.1713 139.9770 78.5231 REMARK 3 T TENSOR REMARK 3 T11: -0.4630 T22: -0.4826 REMARK 3 T33: -0.0674 T12: 0.1066 REMARK 3 T13: -0.1651 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 2.2349 L22: 0.9518 REMARK 3 L33: 1.5285 L12: -0.7238 REMARK 3 L13: -0.6905 L23: -1.5895 REMARK 3 S TENSOR REMARK 3 S11: 0.2103 S12: -0.4508 S13: -0.3504 REMARK 3 S21: 0.5008 S22: -0.3273 S23: -0.0811 REMARK 3 S31: -0.1070 S32: 0.3271 S33: 0.1170 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -2.9862 157.5320 51.0948 REMARK 3 T TENSOR REMARK 3 T11: -0.5216 T22: -0.5470 REMARK 3 T33: -0.1395 T12: -0.0028 REMARK 3 T13: -0.0064 T23: 0.1206 REMARK 3 L TENSOR REMARK 3 L11: 1.9351 L22: 2.8357 REMARK 3 L33: 1.7478 L12: -1.5738 REMARK 3 L13: 1.0017 L23: 0.5809 REMARK 3 S TENSOR REMARK 3 S11: -0.3437 S12: 0.5876 S13: -0.1244 REMARK 3 S21: -0.0118 S22: 0.4571 S23: 0.4418 REMARK 3 S31: -0.4718 S32: -0.1905 S33: -0.1134 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE DATA WAS HIGHLY ANISOTROPIC WITH REMARK 3 DIFFRACTION TO 2.49 ALONG A AND B AXIS AND 3.5 ALONG C AXIS. REMARK 3 THIS ACCOUNTS FOR THE LOW COMPLETENESS IN THE HIGHEST RESOLUTION REMARK 3 SHELLS. THE UCLA MBI SERVER WAS USED TO DETERMINE THE BEST REMARK 3 RESOLUTION LIMITS ALONG THE DIFFERENT AXIS (M. STRONG, M.R. REMARK 3 SAWAYA, S. WANG, M. PHILLIPS, D. CASCIO, D. EISENBERG, PROC NATL REMARK 3 ACAD SCI USA. 103, 8060-8-65, 2006) REMARK 4 REMARK 4 4OX0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000200168. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9393 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30447 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 1.00100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% ETHYLENE GLYCOL, PH 8.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 61.53550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 71.59850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 61.53550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 71.59850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: GEL FILTRATION CONFIRMS TETRAMER FORMATION IN SOLUTION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 286.39400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -83.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 286.39400 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 PRO A 6 REMARK 465 ASN A 7 REMARK 465 VAL A 8 REMARK 465 ALA A 102 REMARK 465 ASP A 103 REMARK 465 GLY A 104 REMARK 465 TYR B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 PRO B 4 REMARK 465 GLU B 5 REMARK 465 PRO B 6 REMARK 465 ASN B 7 REMARK 465 VAL B 8 REMARK 465 GLY B 104 REMARK 465 TYR C 1 REMARK 465 GLY C 2 REMARK 465 ALA C 3 REMARK 465 PRO C 4 REMARK 465 GLU C 5 REMARK 465 PRO C 6 REMARK 465 ASN C 7 REMARK 465 VAL C 8 REMARK 465 PRO C 9 REMARK 465 SER C 10 REMARK 465 ARG C 11 REMARK 465 GLU C 12 REMARK 465 ALA C 13 REMARK 465 TYR D 1 REMARK 465 GLY D 2 REMARK 465 ALA D 3 REMARK 465 PRO D 4 REMARK 465 GLU D 5 REMARK 465 PRO D 6 REMARK 465 ASN D 7 REMARK 465 VAL D 8 REMARK 465 PRO D 9 REMARK 465 SER D 10 REMARK 465 ARG D 11 REMARK 465 GLU D 12 REMARK 465 ALA D 13 REMARK 465 LEU D 14 REMARK 465 ALA D 15 REMARK 465 VAL D 16 REMARK 465 GLU D 17 REMARK 465 LEU D 18 REMARK 465 ALA D 102 REMARK 465 ASP D 103 REMARK 465 GLY D 104 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 100 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 101 CG CD1 CD2 REMARK 470 LEU C 18 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 42 -14.86 103.63 REMARK 500 THR A 96 21.81 -75.74 REMARK 500 SER B 10 60.30 -119.83 REMARK 500 ARG B 11 -0.08 -47.99 REMARK 500 GLU B 12 7.47 80.71 REMARK 500 LEU B 42 -14.50 94.03 REMARK 500 LEU C 42 -13.08 96.91 REMARK 500 LEU D 42 -13.10 96.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 238 DISTANCE = 6.40 ANGSTROMS DBREF 4OX0 A 1 104 UNP O22456 SEP3_ARATH 75 178 DBREF 4OX0 B 1 104 UNP O22456 SEP3_ARATH 75 178 DBREF 4OX0 C 1 104 UNP O22456 SEP3_ARATH 75 178 DBREF 4OX0 D 1 104 UNP O22456 SEP3_ARATH 75 178 SEQRES 1 A 104 TYR GLY ALA PRO GLU PRO ASN VAL PRO SER ARG GLU ALA SEQRES 2 A 104 LEU ALA VAL GLU LEU SER SER GLN GLN GLU TYR LEU LYS SEQRES 3 A 104 LEU LYS GLU ARG TYR ASP ALA LEU GLN ARG THR GLN ARG SEQRES 4 A 104 ASN LEU LEU GLY GLU ASP LEU GLY PRO LEU SER THR LYS SEQRES 5 A 104 GLU LEU GLU SER LEU GLU ARG GLN LEU ASP SER SER LEU SEQRES 6 A 104 LYS GLN ILE ARG ALA LEU ARG THR GLN PHE MET LEU ASP SEQRES 7 A 104 GLN LEU ASN ASP LEU GLN SER LYS GLU ARG MET LEU THR SEQRES 8 A 104 GLU THR ASN LYS THR LEU ARG LEU ARG LEU ALA ASP GLY SEQRES 1 B 104 TYR GLY ALA PRO GLU PRO ASN VAL PRO SER ARG GLU ALA SEQRES 2 B 104 LEU ALA VAL GLU LEU SER SER GLN GLN GLU TYR LEU LYS SEQRES 3 B 104 LEU LYS GLU ARG TYR ASP ALA LEU GLN ARG THR GLN ARG SEQRES 4 B 104 ASN LEU LEU GLY GLU ASP LEU GLY PRO LEU SER THR LYS SEQRES 5 B 104 GLU LEU GLU SER LEU GLU ARG GLN LEU ASP SER SER LEU SEQRES 6 B 104 LYS GLN ILE ARG ALA LEU ARG THR GLN PHE MET LEU ASP SEQRES 7 B 104 GLN LEU ASN ASP LEU GLN SER LYS GLU ARG MET LEU THR SEQRES 8 B 104 GLU THR ASN LYS THR LEU ARG LEU ARG LEU ALA ASP GLY SEQRES 1 C 104 TYR GLY ALA PRO GLU PRO ASN VAL PRO SER ARG GLU ALA SEQRES 2 C 104 LEU ALA VAL GLU LEU SER SER GLN GLN GLU TYR LEU LYS SEQRES 3 C 104 LEU LYS GLU ARG TYR ASP ALA LEU GLN ARG THR GLN ARG SEQRES 4 C 104 ASN LEU LEU GLY GLU ASP LEU GLY PRO LEU SER THR LYS SEQRES 5 C 104 GLU LEU GLU SER LEU GLU ARG GLN LEU ASP SER SER LEU SEQRES 6 C 104 LYS GLN ILE ARG ALA LEU ARG THR GLN PHE MET LEU ASP SEQRES 7 C 104 GLN LEU ASN ASP LEU GLN SER LYS GLU ARG MET LEU THR SEQRES 8 C 104 GLU THR ASN LYS THR LEU ARG LEU ARG LEU ALA ASP GLY SEQRES 1 D 104 TYR GLY ALA PRO GLU PRO ASN VAL PRO SER ARG GLU ALA SEQRES 2 D 104 LEU ALA VAL GLU LEU SER SER GLN GLN GLU TYR LEU LYS SEQRES 3 D 104 LEU LYS GLU ARG TYR ASP ALA LEU GLN ARG THR GLN ARG SEQRES 4 D 104 ASN LEU LEU GLY GLU ASP LEU GLY PRO LEU SER THR LYS SEQRES 5 D 104 GLU LEU GLU SER LEU GLU ARG GLN LEU ASP SER SER LEU SEQRES 6 D 104 LYS GLN ILE ARG ALA LEU ARG THR GLN PHE MET LEU ASP SEQRES 7 D 104 GLN LEU ASN ASP LEU GLN SER LYS GLU ARG MET LEU THR SEQRES 8 D 104 GLU THR ASN LYS THR LEU ARG LEU ARG LEU ALA ASP GLY FORMUL 5 HOH *262(H2 O) HELIX 1 AA1 SER A 10 LEU A 41 1 32 HELIX 2 AA2 SER A 50 LYS A 95 1 46 HELIX 3 AA3 THR A 96 LEU A 99 5 4 HELIX 4 AA4 ALA B 13 LEU B 41 1 29 HELIX 5 AA5 SER B 50 LEU B 101 1 52 HELIX 6 AA6 ALA C 15 LEU C 41 1 27 HELIX 7 AA7 SER C 50 GLY C 104 1 55 HELIX 8 AA8 GLN D 21 LEU D 41 1 21 HELIX 9 AA9 SER D 50 ARG D 100 1 51 CRYST1 123.071 143.197 48.287 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008125 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006983 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020710 0.00000