HEADER DNA BINDING PROTEIN 23-FEB-14 4P0Y TITLE STRUCTURE OF THE DOUBLE STRANDED DNA BINDING TYPE IV SECRETION PROTEIN TITLE 2 TRAN FROM ENTEROCOCCUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AM32; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENTEROCOCCUS FAECALIS PLASMID PAM-BETA-1 COPY NUMBER COMPND 5 REPRESSOR (COPF), REPE (REPE), RESOLVASE (RES BETA), AND TYPE I COMPND 6 TOPOISOMERASE (TOP BETA) GENES, UNCHARACTERIZED PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQTEV KEYWDS GRAM-POSITIVE, CONJUGATION, HELIX-TURN-HELIX, DSDNA BINDING, DNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.GOESSWEINER-MOHR,C.FERCHER,W.KELLER REVDAT 4 27-DEC-23 4P0Y 1 REMARK REVDAT 3 23-SEP-15 4P0Y 1 REMARK REVDAT 2 24-SEP-14 4P0Y 1 JRNL REVDAT 1 30-JUL-14 4P0Y 0 JRNL AUTH N.GOESSWEINER-MOHR,M.EDER,G.HOFER,C.FERCHER,K.ARENDS, JRNL AUTH 2 R.BIRNER-GRUENBERGER,E.GROHMANN,W.KELLER JRNL TITL STRUCTURE OF THE DOUBLE-STRANDED DNA-BINDING TYPE IV JRNL TITL 2 SECRETION PROTEIN TRAN FROM ENTEROCOCCUS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2376 2014 JRNL REFN ESSN 1399-0047 JRNL PMID 25195751 JRNL DOI 10.1107/S1399004714014187 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 41163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2174 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2929 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1900 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 231 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.63000 REMARK 3 B22 (A**2) : 0.85000 REMARK 3 B33 (A**2) : -0.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.189 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1993 ; 0.024 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2674 ; 2.701 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 236 ; 6.702 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;35.485 ;24.314 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 396 ;14.639 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;15.017 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 282 ; 0.148 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1496 ; 0.015 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 4 REMARK 4 4P0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : BARTELS MONOCROMATOR REMARK 200 OPTICS : TOROIDAL MIRROR (M2) TO REMARK 200 VERTICALLY AND HORIZONTALLY REMARK 200 FOCUS THE BEAM AT THE SAMPLE REMARK 200 POSITION DEMAGNIFICATION) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43358 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 55.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.77600 REMARK 200 R SYM FOR SHELL (I) : 0.77600 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS, PEG 3.350, PH 5.5, REMARK 280 MICROBATCH UNDER OIL, TEMPERATURE 298K, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.41000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -26 REMARK 465 LYS A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 SER A -17 REMARK 465 ASP A -16 REMARK 465 TYR A -15 REMARK 465 ASP A -14 REMARK 465 ILE A -13 REMARK 465 PRO A -12 REMARK 465 THR A -11 REMARK 465 THR A -10 REMARK 465 GLU A -9 REMARK 465 ASN A -8 REMARK 465 LEU A -7 REMARK 465 TYR A -6 REMARK 465 PHE A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 MSE A 117 REMARK 465 ASN A 118 REMARK 465 LYS A 119 REMARK 465 ASN A 120 REMARK 465 VAL A 121 REMARK 465 ARG A 122 REMARK 465 MSE B -26 REMARK 465 LYS B -25 REMARK 465 HIS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 SER B -17 REMARK 465 ASP B -16 REMARK 465 TYR B -15 REMARK 465 ASP B -14 REMARK 465 ILE B -13 REMARK 465 PRO B -12 REMARK 465 THR B -11 REMARK 465 THR B -10 REMARK 465 GLU B -9 REMARK 465 ASN B -8 REMARK 465 LEU B -7 REMARK 465 TYR B -6 REMARK 465 PHE B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MSE B 1 REMARK 465 GLY B 2 REMARK 465 MSE B 117 REMARK 465 ASN B 118 REMARK 465 LYS B 119 REMARK 465 ASN B 120 REMARK 465 VAL B 121 REMARK 465 ARG B 122 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 201 O HOH B 242 1.10 REMARK 500 OH TYR B 25 O HOH B 201 1.95 REMARK 500 O HOH A 320 O HOH A 325 2.02 REMARK 500 O HOH A 298 O HOH A 316 2.08 REMARK 500 OE1 GLU A 17 O HOH A 201 2.12 REMARK 500 O HOH B 204 O HOH B 252 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 68 CD GLU A 68 OE2 0.071 REMARK 500 GLU B 17 CD GLU B 17 OE2 0.087 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 77 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ARG B 44 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP B 77 CB - CG - OD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 LYS B 116 CA - C - O ANGL. DEV. = 30.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 115 LYS B 116 141.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4EDC RELATED DB: PDB DBREF 4P0Y A 2 122 UNP Q7BVV5 Q7BVV5_ENTFL 2 122 DBREF 4P0Y B 2 122 UNP Q7BVV5 Q7BVV5_ENTFL 2 122 SEQADV 4P0Y MSE A -26 UNP Q7BVV5 INITIATING METHIONINE SEQADV 4P0Y LYS A -25 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS A -24 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS A -23 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS A -22 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS A -21 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS A -20 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS A -19 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS A -18 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y SER A -17 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ASP A -16 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y TYR A -15 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ASP A -14 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ILE A -13 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y PRO A -12 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y THR A -11 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y THR A -10 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLU A -9 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ASN A -8 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y LEU A -7 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y TYR A -6 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y PHE A -5 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLN A -4 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLY A -3 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y SER A -2 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLY A -1 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y SER A 0 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y MSE A 1 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y MSE B -26 UNP Q7BVV5 INITIATING METHIONINE SEQADV 4P0Y LYS B -25 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS B -24 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS B -23 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS B -22 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS B -21 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS B -20 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS B -19 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y HIS B -18 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y SER B -17 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ASP B -16 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y TYR B -15 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ASP B -14 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ILE B -13 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y PRO B -12 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y THR B -11 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y THR B -10 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLU B -9 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y ASN B -8 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y LEU B -7 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y TYR B -6 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y PHE B -5 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLN B -4 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLY B -3 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y SER B -2 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y GLY B -1 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y SER B 0 UNP Q7BVV5 EXPRESSION TAG SEQADV 4P0Y MSE B 1 UNP Q7BVV5 EXPRESSION TAG SEQRES 1 A 149 MSE LYS HIS HIS HIS HIS HIS HIS HIS SER ASP TYR ASP SEQRES 2 A 149 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SER GLY SEQRES 3 A 149 SER MSE GLY LYS ILE ASN LEU ASN GLN ILE TYR THR ALA SEQRES 4 A 149 LYS GLU MSE SER GLU ARG ILE GLY LYS ASN ARG ASN TYR SEQRES 5 A 149 LEU SER GLN ALA TYR ARG ASN ASN LYS HIS GLU ILE LEU SEQRES 6 A 149 LYS ASN PHE ASN TYR ARG LYS ILE GLY GLY THR ILE ILE SEQRES 7 A 149 PHE SER ASP ASN PRO ASN ASN ASP LEU SER GLN LEU ILE SEQRES 8 A 149 THR ALA LYS GLU ALA SER GLN LEU LEU GLY LYS ASN ASP SEQRES 9 A 149 GLU TYR PHE ALA HIS ILE TYR LYS ARG PHE PRO HIS ARG SEQRES 10 A 149 LEU GLU GLY ILE ASP HIS ILE TYR THR GLY LYS THR LEU SEQRES 11 A 149 PHE LEU THR LYS GLU SER LEU GLU VAL PHE LYS LYS LYS SEQRES 12 A 149 MSE ASN LYS ASN VAL ARG SEQRES 1 B 149 MSE LYS HIS HIS HIS HIS HIS HIS HIS SER ASP TYR ASP SEQRES 2 B 149 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SER GLY SEQRES 3 B 149 SER MSE GLY LYS ILE ASN LEU ASN GLN ILE TYR THR ALA SEQRES 4 B 149 LYS GLU MSE SER GLU ARG ILE GLY LYS ASN ARG ASN TYR SEQRES 5 B 149 LEU SER GLN ALA TYR ARG ASN ASN LYS HIS GLU ILE LEU SEQRES 6 B 149 LYS ASN PHE ASN TYR ARG LYS ILE GLY GLY THR ILE ILE SEQRES 7 B 149 PHE SER ASP ASN PRO ASN ASN ASP LEU SER GLN LEU ILE SEQRES 8 B 149 THR ALA LYS GLU ALA SER GLN LEU LEU GLY LYS ASN ASP SEQRES 9 B 149 GLU TYR PHE ALA HIS ILE TYR LYS ARG PHE PRO HIS ARG SEQRES 10 B 149 LEU GLU GLY ILE ASP HIS ILE TYR THR GLY LYS THR LEU SEQRES 11 B 149 PHE LEU THR LYS GLU SER LEU GLU VAL PHE LYS LYS LYS SEQRES 12 B 149 MSE ASN LYS ASN VAL ARG MODRES 4P0Y MSE A 15 MET MODIFIED RESIDUE MODRES 4P0Y MSE B 15 MET MODIFIED RESIDUE HET MSE A 15 8 HET MSE B 15 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 HOH *231(H2 O) HELIX 1 AA1 ASN A 5 ILE A 9 5 5 HELIX 2 AA2 ALA A 12 ILE A 19 1 8 HELIX 3 AA3 ASN A 24 ASN A 32 1 9 HELIX 4 AA4 LYS A 34 LYS A 39 1 6 HELIX 5 AA5 ASP A 59 SER A 61 5 3 HELIX 6 AA6 ALA A 66 LEU A 73 1 8 HELIX 7 AA7 GLU A 78 PHE A 87 1 10 HELIX 8 AA8 PRO A 88 GLU A 92 5 5 HELIX 9 AA9 LYS A 107 LYS A 116 1 10 HELIX 10 AB1 ASN B 5 ILE B 9 5 5 HELIX 11 AB2 ALA B 12 ILE B 19 1 8 HELIX 12 AB3 ASN B 24 ASN B 32 1 9 HELIX 13 AB4 LYS B 34 LYS B 39 1 6 HELIX 14 AB5 ASP B 59 SER B 61 5 3 HELIX 15 AB6 ALA B 66 LEU B 73 1 8 HELIX 16 AB7 GLU B 78 PHE B 87 1 10 HELIX 17 AB8 PRO B 88 GLU B 92 5 5 HELIX 18 AB9 LYS B 107 LYS B 116 1 10 SHEET 1 AA1 3 TYR A 10 THR A 11 0 SHEET 2 AA1 3 THR A 49 SER A 53 -1 O PHE A 52 N TYR A 10 SHEET 3 AA1 3 ASN A 42 ILE A 46 -1 N ILE A 46 O THR A 49 SHEET 1 AA2 3 LEU A 63 THR A 65 0 SHEET 2 AA2 3 THR A 102 THR A 106 -1 O LEU A 105 N ILE A 64 SHEET 3 AA2 3 HIS A 96 THR A 99 -1 N ILE A 97 O PHE A 104 SHEET 1 AA3 3 TYR B 10 THR B 11 0 SHEET 2 AA3 3 THR B 49 SER B 53 -1 O PHE B 52 N TYR B 10 SHEET 3 AA3 3 ASN B 42 ILE B 46 -1 N ILE B 46 O THR B 49 SHEET 1 AA4 3 LEU B 63 THR B 65 0 SHEET 2 AA4 3 THR B 102 THR B 106 -1 O LEU B 105 N ILE B 64 SHEET 3 AA4 3 HIS B 96 THR B 99 -1 N ILE B 97 O PHE B 104 LINK C GLU A 14 N MSE A 15 1555 1555 1.33 LINK C MSE A 15 N SER A 16 1555 1555 1.35 LINK C GLU B 14 N MSE B 15 1555 1555 1.35 LINK C MSE B 15 N SER B 16 1555 1555 1.34 CRYST1 33.100 62.820 55.870 90.00 90.03 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030211 0.000000 0.000016 0.00000 SCALE2 0.000000 0.015918 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017899 0.00000