HEADER HYDROLASE 04-MAR-14 4P2T TITLE CRYSTAL STRUCTURE OF KAPOSI'S SARCOMA-ASSOCIATED HERPESVIRUS (KSHV) TITLE 2 PROTEASE IN COMPLEX WITH A DIMER DISRUPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: KSHV PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-194; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 8; SOURCE 3 ORGANISM_COMMON: HHV-8; SOURCE 4 ORGANISM_TAXID: 37296; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-PROTEIN INTERACTION INHIBITION, SERINE PROTEASE, INHIBITOR KEYWDS 2 COMPLEX, BETA BARREL AND ALPHA HELICES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.E.GABLE REVDAT 5 27-SEP-23 4P2T 1 REMARK REVDAT 4 27-NOV-19 4P2T 1 REMARK REVDAT 3 20-SEP-17 4P2T 1 SOURCE KEYWDS JRNL REMARK REVDAT 2 01-OCT-14 4P2T 1 JRNL REVDAT 1 16-JUL-14 4P2T 0 JRNL AUTH J.E.GABLE,G.M.LEE,P.JAISHANKAR,B.R.HEARN,C.A.WADDLING, JRNL AUTH 2 A.R.RENSLO,C.S.CRAIK JRNL TITL BROAD-SPECTRUM ALLOSTERIC INHIBITION OF HERPESVIRUS JRNL TITL 2 PROTEASES. JRNL REF BIOCHEMISTRY V. 53 4648 2014 JRNL REFN ISSN 0006-2960 JRNL PMID 24977643 JRNL DOI 10.1021/BI5003234 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 21498 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.770 REMARK 3 FREE R VALUE TEST SET COUNT : 1886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.7984 - 5.0550 1.00 1667 160 0.1836 0.2026 REMARK 3 2 5.0550 - 4.0123 1.00 1579 152 0.1349 0.2217 REMARK 3 3 4.0123 - 3.5052 1.00 1565 150 0.1607 0.2242 REMARK 3 4 3.5052 - 3.1847 1.00 1566 151 0.1720 0.2300 REMARK 3 5 3.1847 - 2.9564 1.00 1542 148 0.1902 0.2793 REMARK 3 6 2.9564 - 2.7821 1.00 1554 150 0.2043 0.2759 REMARK 3 7 2.7821 - 2.6428 1.00 1533 147 0.2115 0.3149 REMARK 3 8 2.6428 - 2.5277 1.00 1543 148 0.2167 0.2939 REMARK 3 9 2.5277 - 2.4304 1.00 1541 148 0.2082 0.2743 REMARK 3 10 2.4304 - 2.3465 1.00 1518 146 0.2222 0.2895 REMARK 3 11 2.3465 - 2.2731 0.96 1464 141 0.2376 0.3165 REMARK 3 12 2.2731 - 2.2082 0.88 1352 130 0.2575 0.3293 REMARK 3 13 2.2082 - 2.1500 0.78 1188 115 0.2696 0.3711 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3249 REMARK 3 ANGLE : 0.788 4467 REMARK 3 CHIRALITY : 0.029 507 REMARK 3 PLANARITY : 0.003 568 REMARK 3 DIHEDRAL : 14.250 1210 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7115 -5.3127 -27.4247 REMARK 3 T TENSOR REMARK 3 T11: 0.3529 T22: 0.2832 REMARK 3 T33: 0.2997 T12: 0.0767 REMARK 3 T13: -0.0666 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.2438 L22: 0.1403 REMARK 3 L33: 0.4211 L12: 0.1725 REMARK 3 L13: 0.1562 L23: 0.1193 REMARK 3 S TENSOR REMARK 3 S11: -0.0519 S12: 0.0902 S13: 0.1064 REMARK 3 S21: 0.1078 S22: -0.0282 S23: -0.1761 REMARK 3 S31: -0.2548 S32: -0.3448 S33: 0.0029 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8475 -9.6504 -32.6916 REMARK 3 T TENSOR REMARK 3 T11: 0.2323 T22: 0.2457 REMARK 3 T33: 0.1957 T12: -0.0276 REMARK 3 T13: -0.0413 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.1222 L22: 0.1107 REMARK 3 L33: 0.2197 L12: 0.0447 REMARK 3 L13: 0.0574 L23: -0.1234 REMARK 3 S TENSOR REMARK 3 S11: -0.1301 S12: -0.0457 S13: -0.0705 REMARK 3 S21: 0.0507 S22: 0.1040 S23: -0.0500 REMARK 3 S31: -0.1587 S32: 0.1044 S33: -0.0131 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3680 -10.6486 -39.4062 REMARK 3 T TENSOR REMARK 3 T11: 0.2128 T22: 0.1675 REMARK 3 T33: 0.1870 T12: 0.0157 REMARK 3 T13: -0.0401 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.3032 L22: 0.3126 REMARK 3 L33: 0.4550 L12: 0.0664 REMARK 3 L13: 0.3865 L23: 0.0795 REMARK 3 S TENSOR REMARK 3 S11: -0.1754 S12: 0.0106 S13: 0.0849 REMARK 3 S21: -0.0364 S22: 0.0579 S23: 0.0119 REMARK 3 S31: -0.2865 S32: 0.1191 S33: -0.0187 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9683 -1.2813 -39.2710 REMARK 3 T TENSOR REMARK 3 T11: 0.4318 T22: 0.4392 REMARK 3 T33: 0.2721 T12: -0.2501 REMARK 3 T13: -0.0698 T23: 0.0461 REMARK 3 L TENSOR REMARK 3 L11: 1.2704 L22: 0.2540 REMARK 3 L33: 0.0349 L12: -0.1992 REMARK 3 L13: -0.1993 L23: 0.0068 REMARK 3 S TENSOR REMARK 3 S11: -0.3433 S12: 0.3268 S13: -0.2004 REMARK 3 S21: -0.1570 S22: 0.1094 S23: -0.0046 REMARK 3 S31: -0.7226 S32: 0.4668 S33: -0.3274 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6721 -22.5286 -35.7915 REMARK 3 T TENSOR REMARK 3 T11: 0.1859 T22: 0.3079 REMARK 3 T33: 0.2834 T12: 0.0501 REMARK 3 T13: -0.0372 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 0.3981 L22: 0.0397 REMARK 3 L33: 0.8988 L12: 0.0081 REMARK 3 L13: -0.1656 L23: -0.0897 REMARK 3 S TENSOR REMARK 3 S11: -0.2375 S12: -0.4284 S13: 0.0980 REMARK 3 S21: 0.0511 S22: 0.3293 S23: -0.0543 REMARK 3 S31: 0.2462 S32: 0.2739 S33: 0.0667 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6990 -17.7264 -6.5075 REMARK 3 T TENSOR REMARK 3 T11: 0.1527 T22: 0.2094 REMARK 3 T33: 0.2087 T12: 0.0029 REMARK 3 T13: -0.0584 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.0100 L22: 0.0065 REMARK 3 L33: 0.1758 L12: -0.0056 REMARK 3 L13: 0.0570 L23: -0.0449 REMARK 3 S TENSOR REMARK 3 S11: -0.1706 S12: 0.1326 S13: 0.1813 REMARK 3 S21: 0.1468 S22: 0.1728 S23: 0.1686 REMARK 3 S31: -0.0693 S32: -0.0988 S33: 0.0051 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8244 -21.3843 -10.5282 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.1779 REMARK 3 T33: 0.1627 T12: -0.0019 REMARK 3 T13: -0.0318 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 0.1909 L22: 0.6608 REMARK 3 L33: 0.3685 L12: -0.1341 REMARK 3 L13: 0.0797 L23: -0.3142 REMARK 3 S TENSOR REMARK 3 S11: -0.0827 S12: 0.1037 S13: 0.0108 REMARK 3 S21: -0.0271 S22: 0.0506 S23: 0.0003 REMARK 3 S31: -0.0255 S32: -0.2097 S33: -0.0050 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 87 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2168 -43.6730 -8.5244 REMARK 3 T TENSOR REMARK 3 T11: 0.2240 T22: 0.1303 REMARK 3 T33: 0.2614 T12: -0.0029 REMARK 3 T13: 0.0394 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 0.4911 L22: 0.2743 REMARK 3 L33: 1.4820 L12: -0.3666 REMARK 3 L13: -0.8512 L23: 0.6341 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: -0.1439 S13: 0.3648 REMARK 3 S21: -0.1641 S22: 0.2882 S23: 0.2611 REMARK 3 S31: 0.1096 S32: 0.0175 S33: 0.1581 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 101 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6848 -23.3847 -6.7706 REMARK 3 T TENSOR REMARK 3 T11: 0.1374 T22: 0.0817 REMARK 3 T33: 0.1387 T12: -0.0104 REMARK 3 T13: -0.0284 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.1195 L22: 0.1422 REMARK 3 L33: 0.6295 L12: 0.1509 REMARK 3 L13: -0.2258 L23: -0.2096 REMARK 3 S TENSOR REMARK 3 S11: -0.0738 S12: 0.0670 S13: 0.0246 REMARK 3 S21: -0.0464 S22: -0.0091 S23: -0.0576 REMARK 3 S31: -0.0665 S32: -0.0382 S33: -0.0002 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 161 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6632 -24.7212 -12.9502 REMARK 3 T TENSOR REMARK 3 T11: 0.2069 T22: 0.2995 REMARK 3 T33: 0.2273 T12: 0.0235 REMARK 3 T13: -0.0509 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.0729 L22: 0.2564 REMARK 3 L33: 0.1424 L12: -0.1356 REMARK 3 L13: 0.0027 L23: -0.0175 REMARK 3 S TENSOR REMARK 3 S11: -0.0497 S12: -0.0458 S13: -0.0035 REMARK 3 S21: -0.1695 S22: -0.0123 S23: 0.0795 REMARK 3 S31: -0.0779 S32: -0.1135 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4P2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22809 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 74.753 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : 0.11800 REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.70800 REMARK 200 R SYM FOR SHELL (I) : 0.70800 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER 2.1 REMARK 200 STARTING MODEL: 3NJQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE PH 7.8, 0.88 M REMARK 280 NAH2PO4, 1.32 M K2HPO4, 0.2 M KCL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.86850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.97350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.62250 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.86850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.97350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.62250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.86850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.97350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.62250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.86850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.97350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.62250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A MONOMER. THERE ARE 2 BIOLOGICAL REMARK 300 UNITS IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -69.73700 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -119.24500 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -34.86850 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 -47.97350 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -59.62250 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 -34.86850 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -47.97350 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -59.62250 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 124 REMARK 465 GLN A 125 REMARK 465 GLN B 3 REMARK 465 SER B 124 REMARK 465 GLN B 125 REMARK 465 THR B 126 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 159 O HOH B 301 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 18 -1.88 72.89 REMARK 500 GLN A 21 35.83 -87.96 REMARK 500 ARG A 143 -75.79 -126.98 REMARK 500 THR B 50 41.35 -108.93 REMARK 500 SER B 62 -110.92 53.49 REMARK 500 VAL B 94 -92.75 -122.45 REMARK 500 LYS B 95 45.90 33.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 24Q A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 24Q B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 24Q B 202 DBREF 4P2T A 3 196 UNP O36607 O36607_HHV8 3 196 DBREF 4P2T B 3 196 UNP O36607 O36607_HHV8 3 196 SEQRES 1 A 194 GLN GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER SEQRES 2 A 194 CYS PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP SEQRES 3 A 194 GLN VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO SEQRES 4 A 194 ILE THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP SEQRES 5 A 194 THR LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS SEQRES 6 A 194 THR GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SEQRES 7 A 194 SER ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO SEQRES 8 A 194 VAL LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU SEQRES 9 A 194 HIS THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS SEQRES 10 A 194 PRO ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE SEQRES 11 A 194 GLN HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY SEQRES 12 A 194 THR VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SEQRES 13 A 194 SER ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS SEQRES 14 A 194 ILE LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SEQRES 15 A 194 SER THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU SEQRES 1 B 194 GLN GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER SEQRES 2 B 194 CYS PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP SEQRES 3 B 194 GLN VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO SEQRES 4 B 194 ILE THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP SEQRES 5 B 194 THR LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS SEQRES 6 B 194 THR GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SEQRES 7 B 194 SER ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO SEQRES 8 B 194 VAL LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU SEQRES 9 B 194 HIS THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS SEQRES 10 B 194 PRO ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE SEQRES 11 B 194 GLN HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY SEQRES 12 B 194 THR VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SEQRES 13 B 194 SER ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS SEQRES 14 B 194 ILE LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SEQRES 15 B 194 SER THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU HET 24Q A 201 66 HET DMS A 202 10 HET 24Q B 201 66 HET 24Q B 202 66 HETNAM 24Q 6-(CYCLOHEXYLMETHYL)-N-[4-(METHYLSULFONYLCARBAMOYL)-2- HETNAM 2 24Q (PHENYLMETHYL)PHENYL]PYRIDINE-2-CARBOXAMIDE HETNAM DMS DIMETHYL SULFOXIDE FORMUL 3 24Q 3(C28 H31 N3 O4 S) FORMUL 4 DMS C2 H6 O S FORMUL 7 HOH *191(H2 O) HELIX 1 AA1 ASP A 26 LEU A 34 5 9 HELIX 2 AA2 SER A 73 SER A 87 1 15 HELIX 3 AA3 SER A 87 ALA A 92 1 6 HELIX 4 AA4 GLU A 100 LEU A 110 1 11 HELIX 5 AA5 HIS A 119 LEU A 123 5 5 HELIX 6 AA6 ASP A 153 ARG A 160 1 8 HELIX 7 AA7 SER A 165 SER A 177 1 13 HELIX 8 AA8 ARG A 180 LEU A 184 5 5 HELIX 9 AA9 SER A 191 LEU A 196 1 6 HELIX 10 AB1 ASP B 26 LEU B 34 5 9 HELIX 11 AB2 SER B 73 SER B 87 1 15 HELIX 12 AB3 SER B 87 ALA B 92 1 6 HELIX 13 AB4 GLU B 100 LEU B 110 1 11 HELIX 14 AB5 HIS B 119 LEU B 123 5 5 HELIX 15 AB6 ASP B 153 SER B 159 1 7 HELIX 16 AB7 SER B 165 CYS B 179 1 15 HELIX 17 AB8 ARG B 180 LEU B 184 5 5 HELIX 18 AB9 SER B 191 THR B 195 5 5 SHEET 1 AA1 9 LEU A 23 LEU A 25 0 SHEET 2 AA1 9 ASP A 12 SER A 15 -1 N VAL A 13 O LEU A 25 SHEET 3 AA1 9 GLY A 112 SER A 117 1 O LEU A 115 N ASP A 12 SHEET 4 AA1 9 PHE A 132 CYS A 138 -1 O CYS A 138 N GLY A 112 SHEET 5 AA1 9 PRO A 41 ILE A 44 1 N THR A 43 O LEU A 137 SHEET 6 AA1 9 GLY A 53 GLN A 60 -1 O GLY A 53 N ILE A 42 SHEET 7 AA1 9 ILE A 65 ILE A 71 -1 O THR A 68 N LEU A 56 SHEET 8 AA1 9 LEU A 5 PHE A 10 -1 N VAL A 7 O GLY A 69 SHEET 9 AA1 9 VAL A 149 GLY A 151 -1 O GLY A 151 N TYR A 6 SHEET 1 AA2 9 LEU B 23 LEU B 25 0 SHEET 2 AA2 9 ASP B 12 SER B 15 -1 N VAL B 13 O LEU B 25 SHEET 3 AA2 9 GLY B 112 SER B 117 1 O LEU B 115 N ASP B 12 SHEET 4 AA2 9 PHE B 132 CYS B 138 -1 O HIS B 134 N SER B 116 SHEET 5 AA2 9 PRO B 41 ILE B 44 1 N THR B 43 O LEU B 137 SHEET 6 AA2 9 GLY B 53 VAL B 61 -1 O GLY B 53 N ILE B 42 SHEET 7 AA2 9 GLY B 64 ILE B 71 -1 O THR B 68 N LEU B 56 SHEET 8 AA2 9 LEU B 5 PHE B 10 -1 N LEU B 5 O ILE B 71 SHEET 9 AA2 9 VAL B 149 GLY B 151 -1 O GLY B 151 N TYR B 6 CISPEP 1 GLN A 3 GLY A 4 0 2.08 CISPEP 2 LEU A 34 PRO A 35 0 2.16 CISPEP 3 LEU B 34 PRO B 35 0 -1.24 SITE 1 AC1 13 PHE A 76 ILE A 105 LEU A 110 PHE A 189 SITE 2 AC1 13 PRO A 192 LEU A 193 LEU A 196 HOH A 303 SITE 3 AC1 13 PRO B 192 LEU B 193 THR B 195 24Q B 201 SITE 4 AC1 13 24Q B 202 SITE 1 AC2 3 ALA A 92 ALA B 92 PRO B 93 SITE 1 AC3 15 LYS A 18 GLU A 45 TRP A 109 ALA A 139 SITE 2 AC3 15 24Q A 201 HOH A 312 LEU B 79 ALA B 80 SITE 3 AC3 15 LEU B 83 VAL B 89 ALA B 90 ILE B 105 SITE 4 AC3 15 TRP B 109 SER B 191 GLU B 194 SITE 1 AC4 12 ARG A 82 LEU A 83 SER A 87 TRP A 109 SITE 2 AC4 12 24Q A 201 HOH A 308 GLU B 45 ALA B 139 SITE 3 AC4 12 LEU B 140 ARG B 144 GLY B 145 HOH B 309 CRYST1 69.737 95.947 119.245 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014340 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010422 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008386 0.00000