HEADER ISOMERASE 21-MAR-14 4P61 TITLE CHICKEN TRIOSEPHOSPHATE ISOMERASE WITH LOOP6 MUTATIONS, V167P AND TITLE 2 W168E. COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TIM,TRIOSE-PHOSPHATE ISOMERASE; COMPND 5 EC: 5.3.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: TPI1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TRIOSEPHOSPHATE ISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.D.PEGAN,A.D.MESECAR REVDAT 2 27-DEC-23 4P61 1 SOURCE JRNL REMARK REVDAT 1 27-AUG-14 4P61 0 JRNL AUTH X.ZHAI,M.K.GO,A.C.O'DONOGHUE,T.L.AMYES,S.D.PEGAN,Y.WANG, JRNL AUTH 2 J.P.LORIA,A.D.MESECAR,J.P.RICHARD JRNL TITL ENZYME ARCHITECTURE: THE EFFECT OF REPLACEMENT AND DELETION JRNL TITL 2 MUTATIONS OF LOOP 6 ON CATALYSIS BY TRIOSEPHOSPHATE JRNL TITL 3 ISOMERASE. JRNL REF BIOCHEMISTRY V. 53 3486 2014 JRNL REFN ISSN 0006-2960 JRNL PMID 24825099 JRNL DOI 10.1021/BI500458T REMARK 2 REMARK 2 RESOLUTION. 1.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 93220 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4916 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.34 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5990 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.1960 REMARK 3 BIN FREE R VALUE SET COUNT : 291 REMARK 3 BIN FREE R VALUE : 0.2240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3646 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.34000 REMARK 3 B33 (A**2) : 0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.063 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.036 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.900 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3870 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5259 ; 1.059 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 523 ; 5.215 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 164 ;38.341 ;25.305 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 688 ;13.000 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;13.287 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 586 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2920 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1982 ; 0.948 ; 1.634 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2486 ; 1.196 ; 2.454 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1888 ; 1.301 ; 1.908 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6793 ; 3.100 ;16.865 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3870 ; 0.995 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 191 ;29.525 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4346 ; 9.518 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4P61 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200782. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98338 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.340 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG 3350 AND 0.1 M TRIS, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.67850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.00850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.67850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.00850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 335 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 379 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 173 REMARK 465 LYS A 174 REMARK 465 THR A 175 REMARK 465 MET B 1 REMARK 465 GLU B 168 REMARK 465 ALA B 169 REMARK 465 ILE B 170 REMARK 465 GLY B 171 REMARK 465 THR B 172 REMARK 465 GLY B 173 REMARK 465 LYS B 174 REMARK 465 THR B 175 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 363 O HOH B 363 2454 1.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 13 -145.50 53.17 REMARK 500 VAL A 196 -78.27 -117.21 REMARK 500 LYS B 13 -146.25 53.58 REMARK 500 VAL B 196 -78.78 -117.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 578 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 588 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH A 590 DISTANCE = 6.52 ANGSTROMS REMARK 525 HOH A 645 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 662 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH A 665 DISTANCE = 8.82 ANGSTROMS REMARK 525 HOH A 668 DISTANCE = 7.60 ANGSTROMS REMARK 525 HOH A 669 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A 672 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH B 536 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 574 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH B 605 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH B 615 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B 627 DISTANCE = 7.17 ANGSTROMS REMARK 525 HOH B 643 DISTANCE = 5.91 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TPH RELATED DB: PDB REMARK 900 CHICKEN TRIOSEPHOSPHATE ISOMERASE DBREF 4P61 A 1 248 UNP P00940 TPIS_CHICK 1 248 DBREF 4P61 B 1 248 UNP P00940 TPIS_CHICK 1 248 SEQADV 4P61 PRO A 167 UNP P00940 VAL 167 ENGINEERED MUTATION SEQADV 4P61 GLU A 168 UNP P00940 TRP 168 ENGINEERED MUTATION SEQADV 4P61 PRO B 167 UNP P00940 VAL 167 ENGINEERED MUTATION SEQADV 4P61 GLU B 168 UNP P00940 TRP 168 ENGINEERED MUTATION SEQRES 1 A 248 MET ALA PRO ARG LYS PHE PHE VAL GLY GLY ASN TRP LYS SEQRES 2 A 248 MET ASN GLY ASP LYS LYS SER LEU GLY GLU LEU ILE HIS SEQRES 3 A 248 THR LEU ASN GLY ALA LYS LEU SER ALA ASP THR GLU VAL SEQRES 4 A 248 VAL CYS GLY ALA PRO SER ILE TYR LEU ASP PHE ALA ARG SEQRES 5 A 248 GLN LYS LEU ASP ALA LYS ILE GLY VAL ALA ALA GLN ASN SEQRES 6 A 248 CYS TYR LYS VAL PRO LYS GLY ALA PHE THR GLY GLU ILE SEQRES 7 A 248 SER PRO ALA MET ILE LYS ASP ILE GLY ALA ALA TRP VAL SEQRES 8 A 248 ILE LEU GLY HIS SER GLU ARG ARG HIS VAL PHE GLY GLU SEQRES 9 A 248 SER ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS ALA LEU SEQRES 10 A 248 ALA GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY GLU LYS SEQRES 11 A 248 LEU ASP GLU ARG GLU ALA GLY ILE THR GLU LYS VAL VAL SEQRES 12 A 248 PHE GLU GLN THR LYS ALA ILE ALA ASP ASN VAL LYS ASP SEQRES 13 A 248 TRP SER LYS VAL VAL LEU ALA TYR GLU PRO PRO GLU ALA SEQRES 14 A 248 ILE GLY THR GLY LYS THR ALA THR PRO GLN GLN ALA GLN SEQRES 15 A 248 GLU VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SER HIS SEQRES 16 A 248 VAL SER ASP ALA VAL ALA GLN SER THR ARG ILE ILE TYR SEQRES 17 A 248 GLY GLY SER VAL THR GLY GLY ASN CYS LYS GLU LEU ALA SEQRES 18 A 248 SER GLN HIS ASP VAL ASP GLY PHE LEU VAL GLY GLY ALA SEQRES 19 A 248 SER LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN ALA LYS SEQRES 20 A 248 HIS SEQRES 1 B 248 MET ALA PRO ARG LYS PHE PHE VAL GLY GLY ASN TRP LYS SEQRES 2 B 248 MET ASN GLY ASP LYS LYS SER LEU GLY GLU LEU ILE HIS SEQRES 3 B 248 THR LEU ASN GLY ALA LYS LEU SER ALA ASP THR GLU VAL SEQRES 4 B 248 VAL CYS GLY ALA PRO SER ILE TYR LEU ASP PHE ALA ARG SEQRES 5 B 248 GLN LYS LEU ASP ALA LYS ILE GLY VAL ALA ALA GLN ASN SEQRES 6 B 248 CYS TYR LYS VAL PRO LYS GLY ALA PHE THR GLY GLU ILE SEQRES 7 B 248 SER PRO ALA MET ILE LYS ASP ILE GLY ALA ALA TRP VAL SEQRES 8 B 248 ILE LEU GLY HIS SER GLU ARG ARG HIS VAL PHE GLY GLU SEQRES 9 B 248 SER ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS ALA LEU SEQRES 10 B 248 ALA GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY GLU LYS SEQRES 11 B 248 LEU ASP GLU ARG GLU ALA GLY ILE THR GLU LYS VAL VAL SEQRES 12 B 248 PHE GLU GLN THR LYS ALA ILE ALA ASP ASN VAL LYS ASP SEQRES 13 B 248 TRP SER LYS VAL VAL LEU ALA TYR GLU PRO PRO GLU ALA SEQRES 14 B 248 ILE GLY THR GLY LYS THR ALA THR PRO GLN GLN ALA GLN SEQRES 15 B 248 GLU VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SER HIS SEQRES 16 B 248 VAL SER ASP ALA VAL ALA GLN SER THR ARG ILE ILE TYR SEQRES 17 B 248 GLY GLY SER VAL THR GLY GLY ASN CYS LYS GLU LEU ALA SEQRES 18 B 248 SER GLN HIS ASP VAL ASP GLY PHE LEU VAL GLY GLY ALA SEQRES 19 B 248 SER LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN ALA LYS SEQRES 20 B 248 HIS FORMUL 3 HOH *760(H2 O) HELIX 1 AA1 ASP A 17 ALA A 31 1 15 HELIX 2 AA2 PRO A 44 ILE A 46 5 3 HELIX 3 AA3 TYR A 47 LEU A 55 1 9 HELIX 4 AA4 SER A 79 ILE A 86 1 8 HELIX 5 AA5 HIS A 95 VAL A 101 1 7 HELIX 6 AA6 SER A 105 GLU A 119 1 15 HELIX 7 AA7 LYS A 130 GLY A 137 1 8 HELIX 8 AA8 ILE A 138 ASP A 152 1 15 HELIX 9 AA9 ASP A 156 SER A 158 5 3 HELIX 10 AB1 THR A 177 VAL A 196 1 20 HELIX 11 AB2 SER A 197 THR A 204 1 8 HELIX 12 AB3 ASN A 216 SER A 222 1 7 HELIX 13 AB4 GLY A 232 PRO A 238 5 7 HELIX 14 AB5 GLU A 239 ASN A 245 1 7 HELIX 15 AB6 ASP B 17 ALA B 31 1 15 HELIX 16 AB7 PRO B 44 ILE B 46 5 3 HELIX 17 AB8 TYR B 47 LEU B 55 1 9 HELIX 18 AB9 SER B 79 ILE B 86 1 8 HELIX 19 AC1 HIS B 95 VAL B 101 1 7 HELIX 20 AC2 SER B 105 GLU B 119 1 15 HELIX 21 AC3 LYS B 130 ALA B 136 1 7 HELIX 22 AC4 ILE B 138 ASP B 152 1 15 HELIX 23 AC5 ASP B 156 SER B 158 5 3 HELIX 24 AC6 THR B 177 VAL B 196 1 20 HELIX 25 AC7 SER B 197 THR B 204 1 8 HELIX 26 AC8 ASN B 216 SER B 222 1 7 HELIX 27 AC9 GLY B 232 PRO B 238 5 7 HELIX 28 AD1 GLU B 239 ASN B 245 1 7 SHEET 1 AA1 9 PHE A 6 ASN A 11 0 SHEET 2 AA1 9 THR A 37 ALA A 43 1 O GLU A 38 N PHE A 6 SHEET 3 AA1 9 GLY A 60 ALA A 63 1 O GLY A 60 N VAL A 39 SHEET 4 AA1 9 TRP A 90 LEU A 93 1 O ILE A 92 N ALA A 63 SHEET 5 AA1 9 GLY A 122 ILE A 127 1 O CYS A 126 N LEU A 93 SHEET 6 AA1 9 VAL A 160 TYR A 164 1 O ALA A 163 N ALA A 125 SHEET 7 AA1 9 ILE A 206 TYR A 208 1 O ILE A 207 N LEU A 162 SHEET 8 AA1 9 GLY A 228 VAL A 231 1 O GLY A 228 N TYR A 208 SHEET 9 AA1 9 PHE A 6 ASN A 11 1 N GLY A 9 O VAL A 231 SHEET 1 AA2 9 PHE B 6 ASN B 11 0 SHEET 2 AA2 9 THR B 37 ALA B 43 1 O GLY B 42 N GLY B 10 SHEET 3 AA2 9 GLY B 60 ALA B 63 1 O ALA B 62 N CYS B 41 SHEET 4 AA2 9 TRP B 90 LEU B 93 1 O ILE B 92 N ALA B 63 SHEET 5 AA2 9 GLY B 122 ILE B 127 1 O CYS B 126 N LEU B 93 SHEET 6 AA2 9 VAL B 160 TYR B 164 1 O ALA B 163 N ALA B 125 SHEET 7 AA2 9 ILE B 206 TYR B 208 1 O ILE B 207 N LEU B 162 SHEET 8 AA2 9 GLY B 228 VAL B 231 1 O GLY B 228 N TYR B 208 SHEET 9 AA2 9 PHE B 6 ASN B 11 1 N GLY B 9 O VAL B 231 CRYST1 79.357 56.017 105.782 90.00 92.83 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012601 0.000000 0.000622 0.00000 SCALE2 0.000000 0.017852 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009465 0.00000