HEADER TRANSPORT PROTEIN 08-APR-14 4PAG TITLE ABC TRANSPORTER SOLUTE BINDING PROTEIN FROM SULFUROSPIRILLUM TITLE 2 DELEYIANUM DSM 6946 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFUROSPIRILLUM DELEYIANUM; SOURCE 3 ORGANISM_TAXID: 525898; SOURCE 4 STRAIN: ATCC 51133 / DSM 6946 / 5175; SOURCE 5 GENE: SDEL_2069; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, ABC TRANSPORTER, SOLUTE BINDING PROTEIN, TRANSPORT KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,M.ENDRES,H.LI,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 5 27-DEC-23 4PAG 1 REMARK REVDAT 4 22-NOV-17 4PAG 1 REMARK REVDAT 3 22-MAR-17 4PAG 1 SOURCE REVDAT 2 11-FEB-15 4PAG 1 SOURCE REVDAT 1 30-APR-14 4PAG 0 JRNL AUTH C.CHANG,M.ENDRES,H.LI,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF ABC TRANSPORTER SOLUTE BINDING PROTEIN JRNL TITL 2 FROM SULFUROSPIRILLUM DELEYIANUM DSM 6946 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 59534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3885 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.1740 REMARK 3 BIN FREE R VALUE SET COUNT : 187 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 624 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : -0.47000 REMARK 3 B33 (A**2) : 0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.92000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.425 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.321 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5528 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5317 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7524 ; 1.199 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12272 ; 0.749 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 665 ; 5.236 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 257 ;35.016 ;24.591 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 917 ;13.282 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;16.287 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 822 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6206 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1262 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10845 ; 1.975 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 187 ;35.698 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 11133 ; 9.434 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4PAG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000201028. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59880 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.96000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MAGNESIUN CHLORIDE, MES, PEG4000, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.40650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 17 REMARK 465 ASN B 17 REMARK 465 GLU B 18 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 69 O HOH A 801 2.02 REMARK 500 OD1 ASP B 69 O HOH B 795 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU B 119 NH1 ARG B 259 2745 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 54 117.86 -168.41 REMARK 500 CYS A 222 -178.87 -173.31 REMARK 500 ASP B 54 118.71 -165.44 REMARK 500 CYS B 222 -179.17 -173.90 REMARK 500 LYS B 273 59.29 -95.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 683 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A 733 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B 775 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B 776 DISTANCE = 6.06 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HIS A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC111208 RELATED DB: TARGETTRACK DBREF 4PAG A 17 340 UNP D1B4R1 D1B4R1_SULD5 17 340 DBREF 4PAG B 17 340 UNP D1B4R1 D1B4R1_SULD5 17 340 SEQRES 1 A 324 ASN GLU SER ARG THR PHE LEU ASP VAL SER ASN LYS PRO SEQRES 2 A 324 ILE VAL LEU PRO GLU HIS ILE THR ARG ILE TYR GLY SER SEQRES 3 A 324 ALA PRO PRO ILE SER PHE MSE ILE TYR VAL ILE ASP ASP SEQRES 4 A 324 THR PRO LEU ILE GLY VAL ASN SER PRO GLN THR ASN LYS SEQRES 5 A 324 ASP ASN ASN ASN GLY GLU LYS PHE LEU SER LYS HIS PHE SEQRES 6 A 324 MSE GLU LEU PRO ILE LEU GLY GLY TRP HIS GLY ASN ASN SEQRES 7 A 324 ILE PRO ASN LEU GLU ALA ILE LEU ALA ALA LYS PRO ASP SEQRES 8 A 324 VAL ILE ILE THR TRP ASP THR PRO LEU LEU ASN GLU LYS SEQRES 9 A 324 THR ALA LYS ASP LEU ALA ARG ILE SER ILE PRO ALA LEU SEQRES 10 A 324 LYS VAL ASN ILE ASP ASP SER GLN ASN TYR PRO GLU VAL SEQRES 11 A 324 PHE ARG TYR LEU GLY ARG VAL MSE GLN LYS GLU GLU ARG SEQRES 12 A 324 ALA ASN ALA LEU ALA ASN MSE ALA GLN THR TYR LEU ASP SEQRES 13 A 324 GLU LEU LYS THR PHE VAL ALA SER ILE PRO GLU LYS GLU SEQRES 14 A 324 ARG THR LYS VAL TYR TYR ALA GLU GLY ASP PHE GLY LEU SEQRES 15 A 324 GLN THR GLU CYS ASP ARG SER PHE HIS SER GLU PRO LEU SEQRES 16 A 324 ALA LEU ALA GLY GLY ASN LEU VAL HIS LYS CYS VAL GLN SEQRES 17 A 324 ASN SER VAL VAL GLY LEU GLN GLU VAL SER PHE GLU GLN SEQRES 18 A 324 ILE ILE LEU TYR ASP PRO GLU VAL ILE ILE VAL GLN ASN SEQRES 19 A 324 PRO THR PHE TYR LYS THR VAL PHE ARG GLU LYS LYS TRP SEQRES 20 A 324 ALA VAL LEU LYS ALA VAL GLN ASN LYS LYS VAL TYR LEU SEQRES 21 A 324 VAL PRO LYS SER PRO PHE ASN TRP THR ASP ARG PRO PRO SEQRES 22 A 324 SER PHE MSE ARG ILE LEU GLY ALA HIS TRP ILE ALA SER SEQRES 23 A 324 LYS LEU TYR PRO THR ARG TYR PRO TYR LYS ILE GLU ASP SEQRES 24 A 324 LYS VAL LYS ALA PHE TYR GLN LEU PHE PHE GLY VAL GLU SEQRES 25 A 324 LEU SER ASN GLU ASP LEU LYS THR TYR PHE LYS LEU SEQRES 1 B 324 ASN GLU SER ARG THR PHE LEU ASP VAL SER ASN LYS PRO SEQRES 2 B 324 ILE VAL LEU PRO GLU HIS ILE THR ARG ILE TYR GLY SER SEQRES 3 B 324 ALA PRO PRO ILE SER PHE MSE ILE TYR VAL ILE ASP ASP SEQRES 4 B 324 THR PRO LEU ILE GLY VAL ASN SER PRO GLN THR ASN LYS SEQRES 5 B 324 ASP ASN ASN ASN GLY GLU LYS PHE LEU SER LYS HIS PHE SEQRES 6 B 324 MSE GLU LEU PRO ILE LEU GLY GLY TRP HIS GLY ASN ASN SEQRES 7 B 324 ILE PRO ASN LEU GLU ALA ILE LEU ALA ALA LYS PRO ASP SEQRES 8 B 324 VAL ILE ILE THR TRP ASP THR PRO LEU LEU ASN GLU LYS SEQRES 9 B 324 THR ALA LYS ASP LEU ALA ARG ILE SER ILE PRO ALA LEU SEQRES 10 B 324 LYS VAL ASN ILE ASP ASP SER GLN ASN TYR PRO GLU VAL SEQRES 11 B 324 PHE ARG TYR LEU GLY ARG VAL MSE GLN LYS GLU GLU ARG SEQRES 12 B 324 ALA ASN ALA LEU ALA ASN MSE ALA GLN THR TYR LEU ASP SEQRES 13 B 324 GLU LEU LYS THR PHE VAL ALA SER ILE PRO GLU LYS GLU SEQRES 14 B 324 ARG THR LYS VAL TYR TYR ALA GLU GLY ASP PHE GLY LEU SEQRES 15 B 324 GLN THR GLU CYS ASP ARG SER PHE HIS SER GLU PRO LEU SEQRES 16 B 324 ALA LEU ALA GLY GLY ASN LEU VAL HIS LYS CYS VAL GLN SEQRES 17 B 324 ASN SER VAL VAL GLY LEU GLN GLU VAL SER PHE GLU GLN SEQRES 18 B 324 ILE ILE LEU TYR ASP PRO GLU VAL ILE ILE VAL GLN ASN SEQRES 19 B 324 PRO THR PHE TYR LYS THR VAL PHE ARG GLU LYS LYS TRP SEQRES 20 B 324 ALA VAL LEU LYS ALA VAL GLN ASN LYS LYS VAL TYR LEU SEQRES 21 B 324 VAL PRO LYS SER PRO PHE ASN TRP THR ASP ARG PRO PRO SEQRES 22 B 324 SER PHE MSE ARG ILE LEU GLY ALA HIS TRP ILE ALA SER SEQRES 23 B 324 LYS LEU TYR PRO THR ARG TYR PRO TYR LYS ILE GLU ASP SEQRES 24 B 324 LYS VAL LYS ALA PHE TYR GLN LEU PHE PHE GLY VAL GLU SEQRES 25 B 324 LEU SER ASN GLU ASP LEU LYS THR TYR PHE LYS LEU MODRES 4PAG MSE A 49 MET MODIFIED RESIDUE MODRES 4PAG MSE A 82 MET MODIFIED RESIDUE MODRES 4PAG MSE A 154 MET MODIFIED RESIDUE MODRES 4PAG MSE A 166 MET MODIFIED RESIDUE MODRES 4PAG MSE A 292 MET MODIFIED RESIDUE MODRES 4PAG MSE B 49 MET MODIFIED RESIDUE MODRES 4PAG MSE B 82 MET MODIFIED RESIDUE MODRES 4PAG MSE B 154 MET MODIFIED RESIDUE MODRES 4PAG MSE B 166 MET MODIFIED RESIDUE MODRES 4PAG MSE B 292 MET MODIFIED RESIDUE HET MSE A 49 8 HET MSE A 82 8 HET MSE A 154 8 HET MSE A 166 8 HET MSE A 292 8 HET MSE B 49 8 HET MSE B 82 8 HET MSE B 154 8 HET MSE B 166 8 HET MSE B 292 8 HET MES A 401 12 HET PEG A 402 7 HET HIS A 403 11 HET MES B 401 12 HET MES B 402 12 HET PEG B 403 7 HETNAM MSE SELENOMETHIONINE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM HIS HISTIDINE FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 MES 3(C6 H13 N O4 S) FORMUL 4 PEG 2(C4 H10 O3) FORMUL 5 HIS C6 H10 N3 O2 1+ FORMUL 9 HOH *624(H2 O) HELIX 1 AA1 ALA A 43 ASP A 54 1 12 HELIX 2 AA2 ASN A 72 LEU A 77 1 6 HELIX 3 AA3 SER A 78 GLU A 83 1 6 HELIX 4 AA4 ASN A 97 LYS A 105 1 9 HELIX 5 AA5 THR A 114 SER A 129 1 16 HELIX 6 AA6 ASP A 139 GLN A 141 5 3 HELIX 7 AA7 ASN A 142 GLN A 155 1 14 HELIX 8 AA8 LYS A 156 SER A 180 1 25 HELIX 9 AA9 ILE A 181 ARG A 186 5 6 HELIX 10 AB1 SER A 208 ALA A 214 1 7 HELIX 11 AB2 SER A 234 ASP A 242 1 9 HELIX 12 AB3 ASN A 250 GLU A 260 1 11 HELIX 13 AB4 LYS A 261 VAL A 265 5 5 HELIX 14 AB5 LEU A 266 ASN A 271 1 6 HELIX 15 AB6 MSE A 292 TYR A 305 1 14 HELIX 16 AB7 LYS A 312 GLY A 326 1 15 HELIX 17 AB8 SER A 330 LYS A 339 1 10 HELIX 18 AB9 ALA B 43 ASP B 54 1 12 HELIX 19 AC1 ASN B 72 LEU B 77 1 6 HELIX 20 AC2 SER B 78 GLU B 83 1 6 HELIX 21 AC3 ASN B 97 LYS B 105 1 9 HELIX 22 AC4 THR B 114 ALA B 126 1 13 HELIX 23 AC5 ASP B 139 GLN B 141 5 3 HELIX 24 AC6 ASN B 142 GLN B 155 1 14 HELIX 25 AC7 LYS B 156 SER B 180 1 25 HELIX 26 AC8 ILE B 181 ARG B 186 5 6 HELIX 27 AC9 SER B 208 ALA B 214 1 7 HELIX 28 AD1 SER B 234 ASP B 242 1 9 HELIX 29 AD2 ASN B 250 GLU B 260 1 11 HELIX 30 AD3 LYS B 261 VAL B 265 5 5 HELIX 31 AD4 LEU B 266 ASN B 271 1 6 HELIX 32 AD5 MSE B 292 TYR B 305 1 14 HELIX 33 AD6 LYS B 312 GLY B 326 1 15 HELIX 34 AD7 SER B 330 LYS B 339 1 10 SHEET 1 AA1 2 THR A 21 LEU A 23 0 SHEET 2 AA1 2 PRO A 29 VAL A 31 -1 O ILE A 30 N PHE A 22 SHEET 1 AA2 3 ILE A 39 GLY A 41 0 SHEET 2 AA2 3 VAL A 108 TRP A 112 1 O ILE A 110 N TYR A 40 SHEET 3 AA2 3 ALA A 132 VAL A 135 1 O LEU A 133 N THR A 111 SHEET 1 AA3 4 ASN A 217 LEU A 218 0 SHEET 2 AA3 4 LYS A 188 ALA A 192 1 N VAL A 189 O ASN A 217 SHEET 3 AA3 4 VAL A 245 VAL A 248 1 O ILE A 247 N ALA A 192 SHEET 4 AA3 4 VAL A 274 LEU A 276 1 O TYR A 275 N VAL A 248 SHEET 1 AA4 2 GLN A 199 THR A 200 0 SHEET 2 AA4 2 GLN A 231 GLU A 232 -1 O GLN A 231 N THR A 200 SHEET 1 AA5 2 THR B 21 LEU B 23 0 SHEET 2 AA5 2 PRO B 29 VAL B 31 -1 O ILE B 30 N PHE B 22 SHEET 1 AA6 3 ILE B 39 GLY B 41 0 SHEET 2 AA6 3 VAL B 108 TRP B 112 1 O ILE B 110 N TYR B 40 SHEET 3 AA6 3 ALA B 132 VAL B 135 1 O LEU B 133 N THR B 111 SHEET 1 AA7 4 GLY B 216 LEU B 218 0 SHEET 2 AA7 4 THR B 187 ALA B 192 1 N THR B 187 O ASN B 217 SHEET 3 AA7 4 VAL B 245 VAL B 248 1 O ILE B 247 N ALA B 192 SHEET 4 AA7 4 VAL B 274 LEU B 276 1 O TYR B 275 N VAL B 248 SHEET 1 AA8 2 GLN B 199 THR B 200 0 SHEET 2 AA8 2 GLN B 231 GLU B 232 -1 O GLN B 231 N THR B 200 SSBOND 1 CYS A 202 CYS A 222 1555 1555 2.08 SSBOND 2 CYS B 202 CYS B 222 1555 1555 2.06 LINK C PHE A 48 N MSE A 49 1555 1555 1.33 LINK C MSE A 49 N ILE A 50 1555 1555 1.33 LINK C PHE A 81 N MSE A 82 1555 1555 1.34 LINK C MSE A 82 N GLU A 83 1555 1555 1.33 LINK C VAL A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N GLN A 155 1555 1555 1.33 LINK C AASN A 165 N MSE A 166 1555 1555 1.33 LINK C BASN A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N ALA A 167 1555 1555 1.33 LINK C PHE A 291 N MSE A 292 1555 1555 1.33 LINK C MSE A 292 N ARG A 293 1555 1555 1.33 LINK C PHE B 48 N MSE B 49 1555 1555 1.33 LINK C MSE B 49 N ILE B 50 1555 1555 1.33 LINK C PHE B 81 N MSE B 82 1555 1555 1.33 LINK C MSE B 82 N GLU B 83 1555 1555 1.33 LINK C VAL B 153 N MSE B 154 1555 1555 1.33 LINK C MSE B 154 N GLN B 155 1555 1555 1.33 LINK C ASN B 165 N MSE B 166 1555 1555 1.33 LINK C MSE B 166 N ALA B 167 1555 1555 1.34 LINK C PHE B 291 N MSE B 292 1555 1555 1.33 LINK C MSE B 292 N ARG B 293 1555 1555 1.34 CISPEP 1 SER A 280 PRO A 281 0 -1.80 CISPEP 2 ARG A 287 PRO A 288 0 8.97 CISPEP 3 SER B 280 PRO B 281 0 -2.89 CISPEP 4 ARG B 287 PRO B 288 0 8.75 SITE 1 AC1 9 LYS A 318 GLU A 328 HOH A 595 HOH A 692 SITE 2 AC1 9 HOH A 708 ARG B 159 PHE B 325 GLY B 326 SITE 3 AC1 9 HOH B 604 SITE 1 AC2 3 LEU A 77 PHE A 325 GLY A 326 SITE 1 AC3 7 ASN A 71 LEU A 276 LYS A 279 TYR A 337 SITE 2 AC3 7 PHE A 338 LYS A 339 HOH A 501 SITE 1 AC4 11 ASN B 71 PRO B 251 LEU B 276 PRO B 278 SITE 2 AC4 11 LYS B 279 THR B 336 TYR B 337 PHE B 338 SITE 3 AC4 11 LYS B 339 HOH B 680 HOH B 721 SITE 1 AC5 12 ARG A 159 PHE A 325 GLY A 326 LYS B 318 SITE 2 AC5 12 ALA B 319 GLN B 322 GLU B 328 HOH B 584 SITE 3 AC5 12 HOH B 615 HOH B 742 HOH B 772 HOH B 783 SITE 1 AC6 2 PHE B 76 GLY B 326 CRYST1 83.055 50.813 91.544 90.00 98.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012040 0.000000 0.001692 0.00000 SCALE2 0.000000 0.019680 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011031 0.00000