HEADER HYDROLASE 12-APR-14 4PBF TITLE PHOSPHOTRIESTERASE VARIANT REV12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOTRIESTERASE VARIANT PTE-REVR12; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BREVUNDIMONAS DIMINUTA; SOURCE 3 ORGANISM_TAXID: 293; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PHOSPHOTRIESTERASE, ARYLESTERASE, EVOLUTION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.CAMPBELL,M.KALTENBACH,N.TOKURIKI,C.J.JACKSON REVDAT 5 15-NOV-23 4PBF 1 REMARK REVDAT 4 27-SEP-23 4PBF 1 LINK REVDAT 3 18-APR-18 4PBF 1 JRNL REMARK REVDAT 2 07-SEP-16 4PBF 1 JRNL REVDAT 1 06-MAY-15 4PBF 0 JRNL AUTH E.CAMPBELL,M.KALTENBACH,G.J.CORREY,P.D.CARR,B.T.POREBSKI, JRNL AUTH 2 E.K.LIVINGSTONE,L.AFRIAT-JURNOU,A.M.BUCKLE,M.WEIK, JRNL AUTH 3 F.HOLLFELDER,N.TOKURIKI,C.J.JACKSON JRNL TITL THE ROLE OF PROTEIN DYNAMICS IN THE EVOLUTION OF NEW ENZYME JRNL TITL 2 FUNCTION. JRNL REF NAT. CHEM. BIOL. V. 12 944 2016 JRNL REFN ESSN 1552-4469 JRNL PMID 27618189 JRNL DOI 10.1038/NCHEMBIO.2175 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 76478 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 3943 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3588 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.3241 REMARK 3 BIN FREE R VALUE SET COUNT : 212 REMARK 3 BIN FREE R VALUE : 0.4236 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5056 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 345 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 6 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.270 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : H+L, -K, -L REMARK 3 TWIN FRACTION : 0.142 REMARK 3 TWIN DOMAIN : 3 REMARK 3 TWIN OPERATOR : H, -K, -H-L REMARK 3 TWIN FRACTION : 0.091 REMARK 3 TWIN DOMAIN : 4 REMARK 3 TWIN OPERATOR : -H-L, K, H REMARK 3 TWIN FRACTION : 0.176 REMARK 3 TWIN DOMAIN : 5 REMARK 3 TWIN OPERATOR : L, K, -H-L REMARK 3 TWIN FRACTION : 0.208 REMARK 3 TWIN DOMAIN : 6 REMARK 3 TWIN OPERATOR : L, -K, H REMARK 3 TWIN FRACTION : 0.113 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.11 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PBF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000201104. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76542 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.16300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 1.32200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4GY0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NAL CACODYLATE, 35% 2-METHYL REMARK 280 -2,4-PENTANEDIOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.75467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.37733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.06600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 18.68867 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 93.44333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -173.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 33 REMARK 465 ARG A 363 REMARK 465 ALA A 364 REMARK 465 SER A 365 REMARK 465 MET B 33 REMARK 465 SER B 365 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET B 272 O HOH B 2641 2.11 REMARK 500 O HOH A 2501 O HOH A 2512 2.14 REMARK 500 OE1 GLU B 181 O HOH B 2501 2.15 REMARK 500 O HOH B 2553 O HOH B 2635 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2522 O HOH B 2524 2664 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 61 -149.83 -149.87 REMARK 500 THR A 128 -164.97 -110.88 REMARK 500 TRP A 131 -156.16 -89.69 REMARK 500 GLU A 159 -129.29 55.08 REMARK 500 ASP A 264 34.25 -85.80 REMARK 500 MET A 272 -72.61 -124.36 REMARK 500 MET A 272 -70.12 -126.23 REMARK 500 TYR A 309 -162.23 -124.40 REMARK 500 VAL A 351 -52.36 -123.66 REMARK 500 SER B 61 -147.13 -147.83 REMARK 500 VAL B 101 34.57 -95.63 REMARK 500 THR B 128 -165.55 -115.10 REMARK 500 TRP B 131 -155.36 -90.65 REMARK 500 GLU B 159 -130.44 54.11 REMARK 500 GLN B 206 35.40 -90.12 REMARK 500 GLN B 206 35.40 -88.80 REMARK 500 ASP B 264 35.36 -96.91 REMARK 500 MET B 272 -104.26 -91.54 REMARK 500 TYR B 292 41.82 -109.36 REMARK 500 TYR B 309 -154.61 -124.16 REMARK 500 TYR B 309 -154.61 -138.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 55 NE2 REMARK 620 2 HIS A 57 NE2 117.6 REMARK 620 3 KCX A 169 OQ2 97.4 90.4 REMARK 620 4 ASP A 301 OD1 84.6 88.9 177.9 REMARK 620 5 CAC A2403 O1 117.1 123.8 94.3 84.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 KCX A 169 OQ1 REMARK 620 2 HIS A 201 ND1 110.7 REMARK 620 3 HIS A 230 NE2 105.4 97.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 55 NE2 REMARK 620 2 HIS B 57 NE2 118.4 REMARK 620 3 KCX B 169 OQ1 92.0 90.5 REMARK 620 4 ASP B 301 OD1 86.1 93.0 176.5 REMARK 620 5 CAC B2403 O1 115.6 126.0 89.1 89.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 KCX B 169 OQ2 REMARK 620 2 HIS B 201 ND1 107.6 REMARK 620 3 HIS B 230 NE2 103.7 101.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 2401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 2402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CAC A 2403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 2404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 2401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 2402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CAC B 2403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 2404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PBE RELATED DB: PDB REMARK 900 RELATED ID: 4PCN RELATED DB: PDB REMARK 900 RELATED ID: 4PCP RELATED DB: PDB REMARK 900 RELATED ID: 4XAF RELATED DB: PDB REMARK 900 RELATED ID: 4XAG RELATED DB: PDB REMARK 900 RELATED ID: 4XAY RELATED DB: PDB REMARK 900 RELATED ID: 4XAZ RELATED DB: PDB REMARK 900 RELATED ID: 4XD3 RELATED DB: PDB REMARK 900 RELATED ID: 4XD4 RELATED DB: PDB REMARK 900 RELATED ID: 4XD5 RELATED DB: PDB REMARK 900 RELATED ID: 4XD6 RELATED DB: PDB DBREF1 4PBF A 33 365 UNP A0A060GTM0_BREDI DBREF2 4PBF A A0A060GTM0 1 333 DBREF1 4PBF B 33 365 UNP A0A060GTM0_BREDI DBREF2 4PBF B A0A060GTM0 1 333 SEQRES 1 A 333 MET GLY ASP ARG ILE ASN THR VAL ARG GLY PRO ILE ALA SEQRES 2 A 333 ILE SER GLU ALA GLY PHE THR LEU THR HIS GLU HIS ILE SEQRES 3 A 333 CYS GLY SER SER ALA GLY PHE LEU ARG ALA TRP PRO GLU SEQRES 4 A 333 PHE PHE GLY SER ARG GLU ALA LEU VAL GLU LYS ALA VAL SEQRES 5 A 333 ARG GLY LEU ARG ARG ALA ARG ALA ALA GLY VAL ARG THR SEQRES 6 A 333 ILE VAL ASP VAL THR THR PHE ASP LEU GLY ARG ASP VAL SEQRES 7 A 333 ARG LEU LEU ALA GLU VAL SER ARG ALA ALA ASP VAL HIS SEQRES 8 A 333 ILE VAL ALA ALA THR GLY MET TRP LEU ASP PRO SER LEU SEQRES 9 A 333 THR ILE ARG MET ARG SER VAL VAL GLU LEU THR GLN PHE SEQRES 10 A 333 PHE LEU ARG GLU ILE GLN HIS GLY ILE GLU ASP THR GLY SEQRES 11 A 333 ILE ARG ALA GLY ILE ILE KCX VAL ALA THR THR ASP LYS SEQRES 12 A 333 MET THR PRO PHE GLN GLU LEU VAL LEU ARG ALA ALA ALA SEQRES 13 A 333 ARG ALA SER LEU ALA THR GLY VAL PRO VAL ILE THR HIS SEQRES 14 A 333 THR GLU GLY SER GLN ARG GLY GLY GLU GLN GLN ALA ALA SEQRES 15 A 333 ILE PHE GLU SER GLU GLY LEU SER PRO SER ARG VAL CYS SEQRES 16 A 333 ILE GLY HIS SER ASP GLU THR ASP ASP LEU SER TYR LEU SEQRES 17 A 333 THR ALA LEU ALA ALA ARG GLY TYR LEU ILE GLY LEU ASP SEQRES 18 A 333 ARG ILE PRO HIS ASN ALA ILE GLY LEU GLU ASP ASN ALA SEQRES 19 A 333 SER ALA THR ALA LEU MET GLY SER ARG SER TRP GLN THR SEQRES 20 A 333 ARG ALA LEU LEU ILE LYS ALA LEU ILE ASP GLN GLY TYR SEQRES 21 A 333 LYS LYS GLN ILE LEU VAL SER ASN ASP TRP LEU PHE GLY SEQRES 22 A 333 MET SER CYS TYR VAL THR ASN PHE MET ASP VAL MET ASP SEQRES 23 A 333 SER VAL ASN PRO ASP GLY MET ALA PHE ILE PRO LEU ARG SEQRES 24 A 333 VAL ILE PRO PHE LEU ARG GLU LYS GLY THR PRO GLN GLU SEQRES 25 A 333 THR LEU ALA GLY ILE THR VAL THR ASN PRO ALA ARG PHE SEQRES 26 A 333 LEU SER PRO THR LEU ARG ALA SER SEQRES 1 B 333 MET GLY ASP ARG ILE ASN THR VAL ARG GLY PRO ILE ALA SEQRES 2 B 333 ILE SER GLU ALA GLY PHE THR LEU THR HIS GLU HIS ILE SEQRES 3 B 333 CYS GLY SER SER ALA GLY PHE LEU ARG ALA TRP PRO GLU SEQRES 4 B 333 PHE PHE GLY SER ARG GLU ALA LEU VAL GLU LYS ALA VAL SEQRES 5 B 333 ARG GLY LEU ARG ARG ALA ARG ALA ALA GLY VAL ARG THR SEQRES 6 B 333 ILE VAL ASP VAL THR THR PHE ASP LEU GLY ARG ASP VAL SEQRES 7 B 333 ARG LEU LEU ALA GLU VAL SER ARG ALA ALA ASP VAL HIS SEQRES 8 B 333 ILE VAL ALA ALA THR GLY MET TRP LEU ASP PRO SER LEU SEQRES 9 B 333 THR ILE ARG MET ARG SER VAL VAL GLU LEU THR GLN PHE SEQRES 10 B 333 PHE LEU ARG GLU ILE GLN HIS GLY ILE GLU ASP THR GLY SEQRES 11 B 333 ILE ARG ALA GLY ILE ILE KCX VAL ALA THR THR ASP LYS SEQRES 12 B 333 MET THR PRO PHE GLN GLU LEU VAL LEU ARG ALA ALA ALA SEQRES 13 B 333 ARG ALA SER LEU ALA THR GLY VAL PRO VAL ILE THR HIS SEQRES 14 B 333 THR GLU GLY SER GLN ARG GLY GLY GLU GLN GLN ALA ALA SEQRES 15 B 333 ILE PHE GLU SER GLU GLY LEU SER PRO SER ARG VAL CYS SEQRES 16 B 333 ILE GLY HIS SER ASP GLU THR ASP ASP LEU SER TYR LEU SEQRES 17 B 333 THR ALA LEU ALA ALA ARG GLY TYR LEU ILE GLY LEU ASP SEQRES 18 B 333 ARG ILE PRO HIS ASN ALA ILE GLY LEU GLU ASP ASN ALA SEQRES 19 B 333 SER ALA THR ALA LEU MET GLY SER ARG SER TRP GLN THR SEQRES 20 B 333 ARG ALA LEU LEU ILE LYS ALA LEU ILE ASP GLN GLY TYR SEQRES 21 B 333 LYS LYS GLN ILE LEU VAL SER ASN ASP TRP LEU PHE GLY SEQRES 22 B 333 MET SER CYS TYR VAL THR ASN PHE MET ASP VAL MET ASP SEQRES 23 B 333 SER VAL ASN PRO ASP GLY MET ALA PHE ILE PRO LEU ARG SEQRES 24 B 333 VAL ILE PRO PHE LEU ARG GLU LYS GLY THR PRO GLN GLU SEQRES 25 B 333 THR LEU ALA GLY ILE THR VAL THR ASN PRO ALA ARG PHE SEQRES 26 B 333 LEU SER PRO THR LEU ARG ALA SER MODRES 4PBF KCX A 169 LYS MODIFIED RESIDUE MODRES 4PBF KCX B 169 LYS MODIFIED RESIDUE HET KCX A 169 12 HET KCX B 169 12 HET ZN A2401 1 HET ZN A2402 1 HET CAC A2403 5 HET MPD A2404 8 HET ZN B2401 1 HET ZN B2402 1 HET CAC B2403 5 HET MPD B2404 8 HETNAM KCX LYSINE NZ-CARBOXYLIC ACID HETNAM ZN ZINC ION HETNAM CAC CACODYLATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN CAC DIMETHYLARSINATE FORMUL 1 KCX 2(C7 H14 N2 O4) FORMUL 3 ZN 4(ZN 2+) FORMUL 5 CAC 2(C2 H6 AS O2 1-) FORMUL 6 MPD 2(C6 H14 O2) FORMUL 11 HOH *345(H2 O) HELIX 1 AA1 SER A 47 ALA A 49 5 3 HELIX 2 AA2 GLY A 64 TRP A 69 1 6 HELIX 3 AA3 PRO A 70 GLY A 74 5 5 HELIX 4 AA4 SER A 75 ALA A 93 1 19 HELIX 5 AA5 THR A 103 GLY A 107 5 5 HELIX 6 AA6 ASP A 109 ASP A 121 1 13 HELIX 7 AA7 SER A 135 MET A 140 1 6 HELIX 8 AA8 SER A 142 HIS A 156 1 15 HELIX 9 AA9 THR A 177 GLY A 195 1 19 HELIX 10 AB1 ARG A 207 GLU A 219 1 13 HELIX 11 AB2 SER A 222 SER A 224 5 3 HELIX 12 AB3 HIS A 230 THR A 234 5 5 HELIX 13 AB4 ASP A 236 ARG A 246 1 11 HELIX 14 AB5 ASN A 265 ALA A 270 1 6 HELIX 15 AB6 SER A 276 GLN A 290 1 15 HELIX 16 AB7 TYR A 292 LYS A 294 5 3 HELIX 17 AB8 ASN A 312 ASN A 321 1 10 HELIX 18 AB9 ASP A 323 MET A 325 5 3 HELIX 19 AC1 ALA A 326 ARG A 331 1 6 HELIX 20 AC2 ARG A 331 LYS A 339 1 9 HELIX 21 AC3 PRO A 342 VAL A 351 1 10 HELIX 22 AC4 VAL A 351 SER A 359 1 9 HELIX 23 AC5 SER B 47 ALA B 49 5 3 HELIX 24 AC6 GLY B 64 TRP B 69 1 6 HELIX 25 AC7 PRO B 70 GLY B 74 5 5 HELIX 26 AC8 SER B 75 ALA B 93 1 19 HELIX 27 AC9 THR B 103 GLY B 107 5 5 HELIX 28 AD1 ASP B 109 ASP B 121 1 13 HELIX 29 AD2 SER B 135 MET B 140 1 6 HELIX 30 AD3 SER B 142 HIS B 156 1 15 HELIX 31 AD4 THR B 177 GLY B 195 1 19 HELIX 32 AD5 ARG B 207 GLU B 219 1 13 HELIX 33 AD6 SER B 222 SER B 224 5 3 HELIX 34 AD7 HIS B 230 THR B 234 5 5 HELIX 35 AD8 ASP B 236 ARG B 246 1 11 HELIX 36 AD9 ASN B 265 MET B 272 1 8 HELIX 37 AE1 SER B 276 GLN B 290 1 15 HELIX 38 AE2 TYR B 292 LYS B 294 5 3 HELIX 39 AE3 ASN B 312 ASN B 321 1 10 HELIX 40 AE4 ASP B 323 MET B 325 5 3 HELIX 41 AE5 ALA B 326 ARG B 331 1 6 HELIX 42 AE6 ARG B 331 LYS B 339 1 9 HELIX 43 AE7 PRO B 342 VAL B 351 1 10 HELIX 44 AE8 VAL B 351 SER B 359 1 9 SHEET 1 AA1 2 ARG A 36 THR A 39 0 SHEET 2 AA1 2 GLY A 42 ALA A 45 -1 O ILE A 44 N ILE A 37 SHEET 1 AA2 3 THR A 52 GLU A 56 0 SHEET 2 AA2 3 THR A 97 ASP A 100 1 O VAL A 99 N LEU A 53 SHEET 3 AA2 3 HIS A 123 VAL A 125 1 O HIS A 123 N ILE A 98 SHEET 1 AA3 2 CYS A 59 GLY A 60 0 SHEET 2 AA3 2 GLY A 305 MET A 306 1 O GLY A 305 N GLY A 60 SHEET 1 AA4 6 ALA A 127 MET A 130 0 SHEET 2 AA4 6 ILE A 167 ALA A 171 1 O KCX A 169 N THR A 128 SHEET 3 AA4 6 VAL A 198 HIS A 201 1 O ILE A 199 N VAL A 170 SHEET 4 AA4 6 VAL A 226 ILE A 228 1 O CYS A 227 N VAL A 198 SHEET 5 AA4 6 LEU A 249 LEU A 252 1 O LEU A 249 N ILE A 228 SHEET 6 AA4 6 ILE A 296 VAL A 298 1 O LEU A 297 N LEU A 252 SHEET 1 AA5 2 ARG B 36 THR B 39 0 SHEET 2 AA5 2 GLY B 42 ALA B 45 -1 O ILE B 44 N ILE B 37 SHEET 1 AA6 3 THR B 52 GLU B 56 0 SHEET 2 AA6 3 THR B 97 ASP B 100 1 O VAL B 99 N LEU B 53 SHEET 3 AA6 3 HIS B 123 VAL B 125 1 O VAL B 125 N ASP B 100 SHEET 1 AA7 2 CYS B 59 GLY B 60 0 SHEET 2 AA7 2 GLY B 305 MET B 306 1 O GLY B 305 N GLY B 60 SHEET 1 AA8 6 ALA B 127 MET B 130 0 SHEET 2 AA8 6 ILE B 167 ALA B 171 1 O KCX B 169 N THR B 128 SHEET 3 AA8 6 VAL B 198 HIS B 201 1 O ILE B 199 N ILE B 168 SHEET 4 AA8 6 VAL B 226 ILE B 228 1 O CYS B 227 N VAL B 198 SHEET 5 AA8 6 LEU B 249 LEU B 252 1 O LEU B 249 N VAL B 226 SHEET 6 AA8 6 ILE B 296 VAL B 298 1 O LEU B 297 N LEU B 252 LINK C ILE A 168 N KCX A 169 1555 1555 1.33 LINK C KCX A 169 N VAL A 170 1555 1555 1.33 LINK C ILE B 168 N KCX B 169 1555 1555 1.33 LINK C KCX B 169 N VAL B 170 1555 1555 1.33 LINK NE2 HIS A 55 ZN ZN A2401 1555 1555 2.09 LINK NE2 HIS A 57 ZN ZN A2401 1555 1555 2.10 LINK OQ2 KCX A 169 ZN ZN A2401 1555 1555 2.25 LINK OQ1 KCX A 169 ZN ZN A2402 1555 1555 2.08 LINK ND1 HIS A 201 ZN ZN A2402 1555 1555 2.34 LINK NE2 HIS A 230 ZN ZN A2402 1555 1555 2.04 LINK OD1 ASP A 301 ZN ZN A2401 1555 1555 2.39 LINK ZN ZN A2401 O1 CAC A2403 1555 1555 1.90 LINK NE2 HIS B 55 ZN ZN B2401 1555 1555 2.24 LINK NE2 HIS B 57 ZN ZN B2401 1555 1555 2.01 LINK OQ1 KCX B 169 ZN ZN B2401 1555 1555 2.26 LINK OQ2 KCX B 169 ZN ZN B2402 1555 1555 2.08 LINK ND1 HIS B 201 ZN ZN B2402 1555 1555 2.26 LINK NE2 HIS B 230 ZN ZN B2402 1555 1555 2.13 LINK OD1 ASP B 301 ZN ZN B2401 1555 1555 2.35 LINK ZN ZN B2401 O1 CAC B2403 1555 1555 1.92 CISPEP 1 ARG B 363 ALA B 364 0 1.26 SITE 1 AC1 5 HIS A 55 HIS A 57 KCX A 169 ASP A 301 SITE 2 AC1 5 CAC A2403 SITE 1 AC2 4 KCX A 169 HIS A 201 HIS A 230 CAC A2403 SITE 1 AC3 9 HIS A 55 HIS A 57 TRP A 131 KCX A 169 SITE 2 AC3 9 HIS A 201 HIS A 230 ASP A 301 ZN A2401 SITE 3 AC3 9 ZN A2402 SITE 1 AC4 4 PHE A 51 ILE A 333 ARG A 337 GLN A 343 SITE 1 AC5 5 HIS B 55 HIS B 57 KCX B 169 ASP B 301 SITE 2 AC5 5 CAC B2403 SITE 1 AC6 4 KCX B 169 HIS B 201 HIS B 230 CAC B2403 SITE 1 AC7 9 HIS B 55 HIS B 57 TRP B 131 KCX B 169 SITE 2 AC7 9 HIS B 201 HIS B 230 ASP B 301 ZN B2401 SITE 3 AC7 9 ZN B2402 SITE 1 AC8 4 ARG A 85 ARG A 89 GLU B 77 ALA B 78 CRYST1 123.696 123.696 112.132 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008084 0.004667 0.000000 0.00000 SCALE2 0.000000 0.009335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008918 0.00000