HEADER OXIDOREDUCTASE 01-MAY-14 4PG0 TITLE INSIGHTS INTO SUBSTRATE AND METAL BINDING FROM THE CRYSTAL STRUCTURE TITLE 2 OF CYANOBACTERIAL ALDEHYDE DEFORMYLATING OXYGENASE WITH SUBSTRATE TITLE 3 BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALDEHYDE DECARBONYLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-243; COMPND 5 SYNONYM: AD,FATTY ALDEHYDE DECARBONYLASE; COMPND 6 EC: 4.1.99.5; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PROCHLOROCOCCUS MARINUS; SOURCE 3 ORGANISM_TAXID: 74547; SOURCE 4 STRAIN: MIT 9313; SOURCE 5 GENE: PMT_1231; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NON-HEME DI-IRON PROTEIN, HYDROCARBON PRODUCTION, ALPHA-HELIX, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR B.C.BUER,B.PAUL,D.DAS,J.A.STUCKEY,E.N.G.MARSH REVDAT 4 27-SEP-23 4PG0 1 REMARK REVDAT 3 22-NOV-17 4PG0 1 SOURCE REMARK REVDAT 2 10-DEC-14 4PG0 1 JRNL REVDAT 1 26-NOV-14 4PG0 0 JRNL AUTH B.C.BUER,B.PAUL,D.DAS,J.A.STUCKEY,E.N.MARSH JRNL TITL INSIGHTS INTO SUBSTRATE AND METAL BINDING FROM THE CRYSTAL JRNL TITL 2 STRUCTURE OF CYANOBACTERIAL ALDEHYDE DEFORMYLATING OXYGENASE JRNL TITL 3 WITH SUBSTRATE BOUND. JRNL REF ACS CHEM.BIOL. V. 9 2584 2014 JRNL REFN ESSN 1554-8937 JRNL PMID 25222710 JRNL DOI 10.1021/CB500343J REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.44 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28419 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1436 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2927 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1951 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2767 REMARK 3 BIN R VALUE (WORKING SET) : 0.1935 REMARK 3 BIN FREE R VALUE : 0.2211 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.47 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 160 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1728 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 127 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11750 REMARK 3 B22 (A**2) : 0.11750 REMARK 3 B33 (A**2) : -0.23500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.234 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1811 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2454 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 638 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 51 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 267 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1811 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 3 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 241 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2280 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.87 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.46 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.83 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|21 - A|241 } REMARK 3 ORIGIN FOR THE GROUP (A): 2.0758 -20.4150 9.6904 REMARK 3 T TENSOR REMARK 3 T11: -0.0916 T22: -0.0471 REMARK 3 T33: -0.0355 T12: -0.0080 REMARK 3 T13: -0.0486 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 1.8654 L22: 0.7089 REMARK 3 L33: 1.1523 L12: -0.1647 REMARK 3 L13: 0.0287 L23: -0.0709 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: 0.0365 S13: -0.0327 REMARK 3 S21: -0.0204 S22: -0.0211 S23: 0.0083 REMARK 3 S31: -0.0129 S32: 0.0006 S33: -0.0174 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PG0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000201331. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0781 REMARK 200 MONOCHROMATOR : SI[111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, MD2 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28419 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 23.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4TW3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG400, 0.1M TRIS PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.97750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.67700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.67700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.96625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.67700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.67700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.98875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.67700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.67700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 86.96625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.67700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.67700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.98875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.97750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 LEU A 4 REMARK 465 GLU A 5 REMARK 465 MET A 6 REMARK 465 PRO A 7 REMARK 465 VAL A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 LEU A 12 REMARK 465 ASP A 13 REMARK 465 SER A 14 REMARK 465 THR A 15 REMARK 465 VAL A 16 REMARK 465 GLY A 17 REMARK 465 SER A 18 REMARK 465 SER A 19 REMARK 465 GLU A 20 REMARK 465 VAL A 242 REMARK 465 SER A 243 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 LYS A 148 CD CE NZ REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 GLU A 157 OE1 OE2 REMARK 470 ARG A 191 CD NE CZ NH1 NH2 REMARK 470 ARG A 192 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 241 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 125 -65.80 -106.64 REMARK 500 GLN A 205 30.10 70.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 45 OE1 REMARK 620 2 GLU A 73 OE1 88.8 REMARK 620 3 HIS A 76 ND1 95.5 93.6 REMARK 620 4 Y39 A 303 OAB 77.9 91.6 171.5 REMARK 620 5 HOH A 526 O 97.7 172.6 82.3 93.2 REMARK 620 6 HOH A 527 O 169.7 87.8 94.5 92.3 86.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 302 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 73 OE2 REMARK 620 2 GLU A 128 OE1 153.4 REMARK 620 3 GLU A 128 OE2 94.8 58.7 REMARK 620 4 HIS A 160 ND1 82.8 98.0 89.1 REMARK 620 5 Y39 A 303 OAC 96.0 78.5 80.8 169.7 REMARK 620 6 HOH A 527 O 104.9 101.7 160.2 91.3 98.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Y39 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PG1 RELATED DB: PDB REMARK 900 RELATED ID: 4PGI RELATED DB: PDB REMARK 900 RELATED ID: 4PGK RELATED DB: PDB DBREF 4PG0 A 1 243 UNP Q7V6D4 ALDEC_PROMM 1 243 SEQADV 4PG0 GLY A 0 UNP Q7V6D4 EXPRESSION TAG SEQRES 1 A 244 GLY MET PRO THR LEU GLU MET PRO VAL ALA ALA VAL LEU SEQRES 2 A 244 ASP SER THR VAL GLY SER SER GLU ALA LEU PRO ASP PHE SEQRES 3 A 244 THR SER ASP ARG TYR LYS ASP ALA TYR SER ARG ILE ASN SEQRES 4 A 244 ALA ILE VAL ILE GLU GLY GLU GLN GLU ALA HIS ASP ASN SEQRES 5 A 244 TYR ILE ALA ILE GLY THR LEU LEU PRO ASP HIS VAL GLU SEQRES 6 A 244 GLU LEU LYS ARG LEU ALA LYS MET GLU MET ARG HIS LYS SEQRES 7 A 244 LYS GLY PHE THR ALA CYS GLY LYS ASN LEU GLY VAL GLU SEQRES 8 A 244 ALA ASP MET ASP PHE ALA ARG GLU PHE PHE ALA PRO LEU SEQRES 9 A 244 ARG ASP ASN PHE GLN THR ALA LEU GLY GLN GLY LYS THR SEQRES 10 A 244 PRO THR CYS LEU LEU ILE GLN ALA LEU LEU ILE GLU ALA SEQRES 11 A 244 PHE ALA ILE SER ALA TYR HIS THR TYR ILE PRO VAL SER SEQRES 12 A 244 ASP PRO PHE ALA ARG LYS ILE THR GLU GLY VAL VAL LYS SEQRES 13 A 244 ASP GLU TYR THR HIS LEU ASN TYR GLY GLU ALA TRP LEU SEQRES 14 A 244 LYS ALA ASN LEU GLU SER CYS ARG GLU GLU LEU LEU GLU SEQRES 15 A 244 ALA ASN ARG GLU ASN LEU PRO LEU ILE ARG ARG MET LEU SEQRES 16 A 244 ASP GLN VAL ALA GLY ASP ALA ALA VAL LEU GLN MET ASP SEQRES 17 A 244 LYS GLU ASP LEU ILE GLU ASP PHE LEU ILE ALA TYR GLN SEQRES 18 A 244 GLU SER LEU THR GLU ILE GLY PHE ASN THR ARG GLU ILE SEQRES 19 A 244 THR ARG MET ALA ALA ALA ALA LEU VAL SER HET FE A 301 1 HET FE A 302 1 HET Y39 A 303 15 HET DMS A 304 4 HETNAM FE FE (III) ION HETNAM Y39 (1S,2S)-2-NONYLCYCLOPROPANECARBOXYLIC ACID HETNAM DMS DIMETHYL SULFOXIDE FORMUL 2 FE 2(FE 3+) FORMUL 4 Y39 C13 H24 O2 FORMUL 5 DMS C2 H6 O S FORMUL 6 HOH *127(H2 O) HELIX 1 AA1 SER A 27 LEU A 59 1 33 HELIX 2 AA2 HIS A 62 GLY A 88 1 27 HELIX 3 AA3 ASP A 92 GLN A 113 1 22 HELIX 4 AA4 LYS A 115 LEU A 125 1 11 HELIX 5 AA5 LEU A 125 ILE A 139 1 15 HELIX 6 AA6 PRO A 140 SER A 142 5 3 HELIX 7 AA7 ASP A 143 ASN A 171 1 29 HELIX 8 AA8 ASN A 171 LEU A 204 1 34 HELIX 9 AA9 ASP A 207 GLY A 227 1 21 HELIX 10 AB1 ASN A 229 ALA A 238 1 10 HELIX 11 AB2 ALA A 239 LEU A 241 5 3 LINK OE1 GLU A 45 FE FE A 301 1555 1555 2.03 LINK OE1 GLU A 73 FE FE A 301 1555 1555 1.99 LINK OE2 GLU A 73 FE FE A 302 1555 1555 2.11 LINK ND1 HIS A 76 FE FE A 301 1555 1555 2.21 LINK OE1 GLU A 128 FE FE A 302 1555 1555 2.27 LINK OE2 GLU A 128 FE FE A 302 1555 1555 2.22 LINK ND1 HIS A 160 FE FE A 302 1555 1555 2.30 LINK FE FE A 301 OAB Y39 A 303 1555 1555 2.06 LINK FE FE A 301 O HOH A 526 1555 1555 1.98 LINK FE FE A 301 O HOH A 527 1555 1555 2.08 LINK FE FE A 302 OAC Y39 A 303 1555 1555 2.17 LINK FE FE A 302 O HOH A 527 1555 1555 1.98 SITE 1 AC1 7 GLU A 45 GLU A 73 HIS A 76 FE A 302 SITE 2 AC1 7 Y39 A 303 HOH A 526 HOH A 527 SITE 1 AC2 6 GLU A 73 GLU A 128 HIS A 160 FE A 301 SITE 2 AC2 6 Y39 A 303 HOH A 527 SITE 1 AC3 16 ILE A 40 VAL A 41 GLY A 44 GLU A 45 SITE 2 AC3 16 GLU A 73 GLN A 123 ILE A 127 GLU A 128 SITE 3 AC3 16 PHE A 130 ALA A 131 TYR A 135 MET A 206 SITE 4 AC3 16 FE A 301 FE A 302 HOH A 526 HOH A 527 SITE 1 AC4 5 TYR A 34 ILE A 37 ASN A 38 PHE A 80 SITE 2 AC4 5 TYR A 138 CRYST1 77.354 77.354 115.955 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012928 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012928 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008624 0.00000