HEADER MEMBRANCE PROTEIN 02-MAY-14 4PGR TITLE CRYSTAL STRUCTURE OF YETJ FROM BACILLUS SUBTILIS AT PH 8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN YETJ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: YETJ, BSU07200; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3)PLYSS AG KEYWDS MEMBRANE PROTEIN, 7-TMS, TRIPLE-HELIX SANDWICH, DI-ASPARTYL PH KEYWDS 2 SENSOR, CALCIUM LEAK, CLOSED-CONFORMATION, NATIVE-SAD PHASING, KEYWDS 3 STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK CONSORTIUM ON MEMBRANE KEYWDS 4 PROTEIN STRUCTURE, NYCOMPS, MEMBRANCE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Q.LIU,Y.CHANG,W.A.HENDRICKSON,NEW YORK CONSORTIUM ON MEMBRANE PROTEIN AUTHOR 2 STRUCTURE (NYCOMPS) REVDAT 5 27-DEC-23 4PGR 1 REMARK REVDAT 4 25-DEC-19 4PGR 1 REMARK REVDAT 3 20-SEP-17 4PGR 1 SOURCE JRNL REMARK REVDAT 2 18-JUN-14 4PGR 1 JRNL REVDAT 1 04-JUN-14 4PGR 0 JRNL AUTH Y.CHANG,R.BRUNI,B.KLOSS,Z.ASSUR,E.KLOPPMANN,B.ROST, JRNL AUTH 2 W.A.HENDRICKSON,Q.LIU JRNL TITL STRUCTURAL BASIS FOR A PH-SENSITIVE CALCIUM LEAK ACROSS JRNL TITL 2 MEMBRANES. JRNL REF SCIENCE V. 344 1131 2014 JRNL REFN ESSN 1095-9203 JRNL PMID 24904158 JRNL DOI 10.1126/SCIENCE.1252043 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 23952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.0282 - 1.9501 0.98 2503 136 0.2456 0.2914 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.50 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1667 REMARK 3 ANGLE : 0.831 2267 REMARK 3 CHIRALITY : 0.062 279 REMARK 3 PLANARITY : 0.003 268 REMARK 3 DIHEDRAL : 12.061 566 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 6:35) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1831 34.2001 -5.2588 REMARK 3 T TENSOR REMARK 3 T11: 0.1179 T22: 0.2380 REMARK 3 T33: 0.1374 T12: -0.0278 REMARK 3 T13: 0.0149 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.9574 L22: 4.9606 REMARK 3 L33: 2.1460 L12: -2.1326 REMARK 3 L13: 0.1571 L23: -0.0774 REMARK 3 S TENSOR REMARK 3 S11: 0.1719 S12: 0.1380 S13: 0.1320 REMARK 3 S21: -0.5346 S22: -0.0916 S23: -0.1742 REMARK 3 S31: -0.1777 S32: 0.1964 S33: -0.0584 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 36:56) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3500 17.9059 11.1528 REMARK 3 T TENSOR REMARK 3 T11: 0.1631 T22: 0.3209 REMARK 3 T33: 0.2700 T12: 0.0142 REMARK 3 T13: 0.0003 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 3.2093 L22: 4.8836 REMARK 3 L33: 6.7232 L12: -2.0990 REMARK 3 L13: -4.1089 L23: 3.2917 REMARK 3 S TENSOR REMARK 3 S11: -0.4590 S12: -0.1553 S13: -0.4008 REMARK 3 S21: 0.4708 S22: 0.0736 S23: -0.0279 REMARK 3 S31: 0.6008 S32: 0.3402 S33: 0.3202 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 57:66) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4248 38.1687 11.4023 REMARK 3 T TENSOR REMARK 3 T11: 0.2876 T22: 0.4472 REMARK 3 T33: 0.3417 T12: -0.1015 REMARK 3 T13: 0.0351 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 6.9148 L22: 1.7812 REMARK 3 L33: 5.0371 L12: -1.8149 REMARK 3 L13: -5.3986 L23: 1.6645 REMARK 3 S TENSOR REMARK 3 S11: 0.7973 S12: -1.3028 S13: 1.0489 REMARK 3 S21: 0.3637 S22: 0.1236 S23: -0.5603 REMARK 3 S31: -1.1083 S32: 0.7691 S33: -0.8661 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 67:107) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3230 20.8220 1.3650 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.2869 REMARK 3 T33: 0.2268 T12: 0.0065 REMARK 3 T13: 0.0127 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.9373 L22: 2.0136 REMARK 3 L33: 0.4538 L12: 0.6098 REMARK 3 L13: -0.2083 L23: -0.3719 REMARK 3 S TENSOR REMARK 3 S11: -0.0342 S12: 0.0785 S13: -0.3200 REMARK 3 S21: -0.0774 S22: 0.0645 S23: -0.0224 REMARK 3 S31: 0.1592 S32: 0.0067 S33: -0.0328 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 108:121) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9827 41.1599 -1.1320 REMARK 3 T TENSOR REMARK 3 T11: 0.1571 T22: 0.3512 REMARK 3 T33: 0.2974 T12: -0.0244 REMARK 3 T13: -0.0051 T23: 0.1252 REMARK 3 L TENSOR REMARK 3 L11: 5.1860 L22: 4.3257 REMARK 3 L33: 8.8334 L12: -0.5031 REMARK 3 L13: 0.9268 L23: 5.9610 REMARK 3 S TENSOR REMARK 3 S11: -0.1464 S12: 0.3138 S13: 0.4510 REMARK 3 S21: -0.4247 S22: 0.1020 S23: 0.3936 REMARK 3 S31: -0.5309 S32: 0.2412 S33: 0.1272 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 122:151) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0630 28.7888 18.1609 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.2132 REMARK 3 T33: 0.1232 T12: 0.0208 REMARK 3 T13: 0.0127 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 1.2434 L22: 8.1859 REMARK 3 L33: 3.0397 L12: -0.4712 REMARK 3 L13: -0.1028 L23: -2.7585 REMARK 3 S TENSOR REMARK 3 S11: -0.1260 S12: -0.0946 S13: 0.0590 REMARK 3 S21: 0.6655 S22: 0.1950 S23: 0.3241 REMARK 3 S31: -0.0872 S32: -0.2403 S33: -0.0766 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 152:184) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6587 36.7377 6.6220 REMARK 3 T TENSOR REMARK 3 T11: 0.1110 T22: 0.2160 REMARK 3 T33: 0.1497 T12: 0.0357 REMARK 3 T13: -0.0012 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 4.4277 L22: 7.5843 REMARK 3 L33: 2.7617 L12: 4.8535 REMARK 3 L13: -2.1018 L23: -3.4294 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: 0.1077 S13: 0.1409 REMARK 3 S21: 0.0369 S22: 0.1319 S23: 0.1153 REMARK 3 S31: -0.0894 S32: -0.2165 S33: -0.0300 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 185:212) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7872 25.7060 4.8139 REMARK 3 T TENSOR REMARK 3 T11: 0.1055 T22: 0.2493 REMARK 3 T33: 0.1426 T12: 0.0289 REMARK 3 T13: -0.0020 T23: 0.0230 REMARK 3 L TENSOR REMARK 3 L11: 5.4674 L22: 9.4956 REMARK 3 L33: 1.7917 L12: 5.3835 REMARK 3 L13: -1.5297 L23: -2.4654 REMARK 3 S TENSOR REMARK 3 S11: -0.0441 S12: -0.2002 S13: 0.0425 REMARK 3 S21: 0.0039 S22: -0.0029 S23: 0.0708 REMARK 3 S31: 0.1206 S32: -0.1023 S33: -0.0187 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PGR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000201249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23957 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 600, 100 MM CACL2, 100 MM TRIS REMARK 280 -HCL, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 193.04200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.52100 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 144.78150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.26050 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 241.30250 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 193.04200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 96.52100 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 48.26050 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 144.78150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 241.30250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 303 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 327 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 VAL A 5 REMARK 465 ASP A 213 REMARK 465 ASP A 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 62 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 322 O HOH A 325 1.71 REMARK 500 O HOH A 391 O HOH A 398 1.87 REMARK 500 O HOH A 430 O HOH A 432 1.90 REMARK 500 O HOH A 409 O HOH A 470 1.97 REMARK 500 O HOH A 400 O HOH A 404 1.98 REMARK 500 O HOH A 458 O HOH A 460 1.98 REMARK 500 O HOH A 326 O HOH A 328 2.02 REMARK 500 O HOH A 438 O HOH A 442 2.03 REMARK 500 O HOH A 459 O HOH A 475 2.06 REMARK 500 O HOH A 331 O HOH A 340 2.07 REMARK 500 O HOH A 333 O HOH A 460 2.10 REMARK 500 O HOH A 376 O HOH A 404 2.10 REMARK 500 O HOH A 379 O HOH A 386 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 324 O HOH A 324 8675 1.80 REMARK 500 O HOH A 312 O HOH A 325 8665 2.05 REMARK 500 O HOH A 336 O HOH A 338 8665 2.08 REMARK 500 O HOH A 332 O HOH A 332 8675 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 412 DISTANCE = 7.91 ANGSTROMS REMARK 525 HOH A 418 DISTANCE = 8.70 ANGSTROMS REMARK 525 HOH A 419 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH A 420 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A 431 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH A 439 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A 463 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A 473 DISTANCE = 7.19 ANGSTROMS REMARK 525 HOH A 476 DISTANCE = 6.07 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PGV RELATED DB: PDB REMARK 900 RELATED ID: 4PGS RELATED DB: PDB REMARK 900 RELATED ID: 4PGW RELATED DB: PDB REMARK 900 RELATED ID: 4PGU RELATED DB: PDB REMARK 900 RELATED ID: NYCOMPS-GO.6 RELATED DB: TARGETTRACK DBREF 4PGR A 1 214 UNP O31539 YETJ_BACSU 1 214 SEQADV 4PGR SER A -2 UNP O31539 EXPRESSION TAG SEQADV 4PGR ASN A -1 UNP O31539 EXPRESSION TAG SEQADV 4PGR ALA A 0 UNP O31539 EXPRESSION TAG SEQRES 1 A 217 SER ASN ALA MET GLN ALA THR VAL HIS GLU SER LYS GLN SEQRES 2 A 217 SER ILE MET GLN ARG ILE LEU THR VAL PHE VAL PHE THR SEQRES 3 A 217 LEU LEU ILE ALA THR VAL GLY LEU PHE ILE GLY GLN PHE SEQRES 4 A 217 VAL PRO VAL ALA LEU MET LEU PRO LEU SER ILE LEU GLU SEQRES 5 A 217 VAL ALA MET ILE ILE LEU ALA PHE TRP MET ARG ARG ARG SEQRES 6 A 217 LYS ALA VAL GLY TYR ALA PHE VAL TYR THR PHE ALA PHE SEQRES 7 A 217 VAL SER GLY ILE THR LEU PHE PRO ILE VAL SER HIS TYR SEQRES 8 A 217 ALA SER ILE ALA GLY ALA TYR VAL VAL LEU GLU ALA PHE SEQRES 9 A 217 GLY SER THR PHE VAL ILE PHE ALA VAL LEU GLY THR ILE SEQRES 10 A 217 GLY ALA LYS MET LYS LYS ASP LEU SER PHE LEU TRP SER SEQRES 11 A 217 PHE LEU LEU VAL ALA VAL LEU ALA LEU ALA VAL VAL GLY SEQRES 12 A 217 ILE PHE ASN ILE PHE SER PRO LEU ASN SER ALA ALA MET SEQRES 13 A 217 MET ALA TYR SER VAL ILE GLY THR ILE VAL PHE SER LEU SEQRES 14 A 217 TYR ILE LEU TYR ASP LEU ASN GLN ILE LYS HIS ARG HIS SEQRES 15 A 217 ILE THR GLU ASP LEU ILE PRO VAL MET ALA LEU SER LEU SEQRES 16 A 217 TYR LEU ASP PHE ILE ASN LEU PHE ILE ASN LEU LEU ARG SEQRES 17 A 217 PHE PHE GLY ILE LEU SER SER ASP ASP FORMUL 2 HOH *176(H2 O) HELIX 1 AA1 SER A 8 GLN A 35 1 28 HELIX 2 AA2 PHE A 36 VAL A 37 5 2 HELIX 3 AA3 PRO A 38 MET A 42 5 5 HELIX 4 AA4 PRO A 44 MET A 59 1 16 HELIX 5 AA5 GLY A 66 LEU A 81 1 16 HELIX 6 AA6 LEU A 81 GLY A 93 1 13 HELIX 7 AA7 ALA A 94 MET A 118 1 25 HELIX 8 AA8 LEU A 122 PHE A 124 5 3 HELIX 9 AA9 LEU A 125 SER A 146 1 22 HELIX 10 AB1 ASN A 149 ARG A 178 1 30 HELIX 11 AB2 THR A 181 ASP A 183 5 3 HELIX 12 AB3 LEU A 184 SER A 211 1 28 CRYST1 61.547 61.547 289.563 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016248 0.009381 0.000000 0.00000 SCALE2 0.000000 0.018761 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003453 0.00000