HEADER HYDROLASE 17-DEC-10 4PK9 TITLE THE CRYSTAL STRUCTURE OF NATIVE PATATIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PATATIN-17; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 23-386; COMPND 5 EC: 3.1.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOLANUM CARDIOPHYLLUM; SOURCE 3 ORGANISM_COMMON: HEARTLEAF NIGHTSHADE; SOURCE 4 ORGANISM_TAXID: 160510; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: CD41; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24 KEYWDS ALPHA/BETA CLASS FOLD WITH APPROXIMATELY THREE LAYERS, SERINE KEYWDS 2 HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.J.WIJEYESAKERE,J.A.STUCKEY,R.J.RICHARDSON REVDAT 5 27-SEP-23 4PK9 1 REMARK REVDAT 4 18-DEC-19 4PK9 1 REMARK REVDAT 3 27-SEP-17 4PK9 1 SOURCE REMARK REVDAT 2 08-OCT-14 4PK9 1 JRNL REVDAT 1 01-OCT-14 4PK9 0 JRNL AUTH S.J.WIJEYESAKERE,R.J.RICHARDSON,J.A.STUCKEY JRNL TITL CRYSTAL STRUCTURE OF PATATIN-17 IN COMPLEX WITH AGED AND JRNL TITL 2 NON-AGED ORGANOPHOSPHORUS COMPOUNDS. JRNL REF PLOS ONE V. 9 08245 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 25248161 JRNL DOI 10.1371/JOURNAL.PONE.0108245 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 24814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1263 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.05 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2512 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1855 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2390 REMARK 3 BIN R VALUE (WORKING SET) : 0.1838 REMARK 3 BIN FREE R VALUE : 0.2168 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.86 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 122 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2782 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 127 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.37090 REMARK 3 B22 (A**2) : 2.37090 REMARK 3 B33 (A**2) : -4.74180 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.206 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2882 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3921 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1341 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 80 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 415 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2882 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.99 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|24 - A|146 } REMARK 3 ORIGIN FOR THE GROUP (A): -17.3317 22.9761 -21.6010 REMARK 3 T TENSOR REMARK 3 T11: -0.0214 T22: -0.0125 REMARK 3 T33: -0.0243 T12: 0.0076 REMARK 3 T13: 0.0187 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.4109 L22: 0.7901 REMARK 3 L33: 0.2577 L12: -0.0753 REMARK 3 L13: -0.2586 L23: 0.0463 REMARK 3 S TENSOR REMARK 3 S11: 0.0281 S12: 0.0496 S13: 0.0310 REMARK 3 S21: -0.0759 S22: -0.0383 S23: -0.0694 REMARK 3 S31: 0.0160 S32: 0.0346 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|147 - A|181 } REMARK 3 ORIGIN FOR THE GROUP (A): -30.2788 33.4338 -16.8004 REMARK 3 T TENSOR REMARK 3 T11: -0.0184 T22: -0.0176 REMARK 3 T33: 0.0100 T12: -0.0054 REMARK 3 T13: 0.0146 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.0002 L22: 1.8105 REMARK 3 L33: 0.0000 L12: -0.1684 REMARK 3 L13: 0.0335 L23: 0.0264 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: -0.0542 S13: -0.0255 REMARK 3 S21: 0.0198 S22: -0.0112 S23: 0.0866 REMARK 3 S31: 0.0047 S32: 0.0062 S33: 0.0141 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|182 - A|285 } REMARK 3 ORIGIN FOR THE GROUP (A): -22.9331 29.8881 -8.4054 REMARK 3 T TENSOR REMARK 3 T11: -0.0327 T22: -0.0227 REMARK 3 T33: -0.0103 T12: 0.0116 REMARK 3 T13: 0.0236 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.1885 L22: 0.4159 REMARK 3 L33: 0.5131 L12: 0.0246 REMARK 3 L13: 0.0841 L23: 0.1243 REMARK 3 S TENSOR REMARK 3 S11: -0.0176 S12: 0.0154 S13: 0.0434 REMARK 3 S21: -0.0040 S22: -0.0021 S23: 0.0678 REMARK 3 S31: -0.0384 S32: -0.0244 S33: 0.0196 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|286 - A|331 } REMARK 3 ORIGIN FOR THE GROUP (A): -18.1715 19.5261 -1.7776 REMARK 3 T TENSOR REMARK 3 T11: -0.0092 T22: -0.0158 REMARK 3 T33: -0.0146 T12: 0.0088 REMARK 3 T13: -0.0002 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.0470 L22: 1.1705 REMARK 3 L33: 0.8135 L12: 0.9757 REMARK 3 L13: 0.3098 L23: -0.0848 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.0670 S13: -0.0408 REMARK 3 S21: 0.1109 S22: -0.0910 S23: -0.0556 REMARK 3 S31: -0.0656 S32: 0.0512 S33: 0.0968 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|332 - A|382 } REMARK 3 ORIGIN FOR THE GROUP (A): -14.9492 9.6180 -12.6818 REMARK 3 T TENSOR REMARK 3 T11: -0.0324 T22: -0.0509 REMARK 3 T33: -0.0171 T12: 0.0357 REMARK 3 T13: 0.0490 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 1.2419 L22: 2.3477 REMARK 3 L33: 0.5388 L12: 1.5552 REMARK 3 L13: 0.1649 L23: 0.0885 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: -0.0121 S13: -0.0215 REMARK 3 S21: 0.0753 S22: -0.0385 S23: -0.1318 REMARK 3 S31: 0.1195 S32: 0.0304 S33: 0.0366 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MAXIMUM LIKELIHOOD REFINEMENT IN REMARK 3 AUTOBUSTER REMARK 4 REMARK 4 4PK9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000200702. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 93.15 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BE LENSES/DIAMOND LAUE MONO REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24922 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 48.885 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27400 REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1OXW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 49% V/V PEG400, REMARK 280 225 MM CESIUM CHLORIDE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 122.47350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.65800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.65800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 183.71025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.65800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.65800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.23675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.65800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.65800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 183.71025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.65800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.65800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 61.23675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 122.47350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -53.31600 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 53.31600 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 444 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 465 HIS A 18 REMARK 465 HIS A 19 REMARK 465 HIS A 20 REMARK 465 ALA A 21 REMARK 465 MET A 22 REMARK 465 ALA A 23 REMARK 465 LYS A 383 REMARK 465 ALA A 384 REMARK 465 SER A 385 REMARK 465 TYR A 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 77 -127.37 56.26 REMARK 500 PHE A 114 53.69 -98.08 REMARK 500 THR A 192 -12.11 79.84 REMARK 500 ASP A 215 141.32 -39.66 REMARK 500 ASP A 357 -8.93 78.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 481 DISTANCE = 6.20 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PKA RELATED DB: PDB REMARK 900 RELATED ID: 1OXW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SEMET PATATIN-17 REMARK 900 RELATED ID: 4PKB RELATED DB: PDB DBREF 4PK9 A 23 386 UNP Q8LPW4 PAT17_SOLCD 23 386 SEQADV 4PK9 MET A 14 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 HIS A 15 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 HIS A 16 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 HIS A 17 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 HIS A 18 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 HIS A 19 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 HIS A 20 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 ALA A 21 UNP Q8LPW4 EXPRESSION TAG SEQADV 4PK9 MET A 22 UNP Q8LPW4 EXPRESSION TAG SEQRES 1 A 373 MET HIS HIS HIS HIS HIS HIS ALA MET ALA GLN LEU GLY SEQRES 2 A 373 GLU MET VAL THR VAL LEU SER ILE ASP GLY GLY GLY ILE SEQRES 3 A 373 ARG GLY ILE ILE PRO ALA THR ILE LEU GLU PHE LEU GLU SEQRES 4 A 373 GLY GLN LEU GLN GLU MET ASP ASN ASN ALA ASP ALA ARG SEQRES 5 A 373 LEU ALA ASP TYR PHE ASP VAL ILE GLY GLY THR SER THR SEQRES 6 A 373 GLY GLY LEU LEU THR ALA MET ILE SER THR PRO ASN GLU SEQRES 7 A 373 ASN ASN ARG PRO PHE ALA ALA ALA LYS GLU ILE VAL PRO SEQRES 8 A 373 PHE TYR PHE GLU HIS GLY PRO GLN ILE PHE ASN PRO SER SEQRES 9 A 373 GLY GLN ILE LEU GLY PRO LYS TYR ASP GLY LYS TYR LEU SEQRES 10 A 373 MET GLN VAL LEU GLN GLU LYS LEU GLY GLU THR ARG VAL SEQRES 11 A 373 HIS GLN ALA LEU THR GLU VAL VAL ILE SER SER PHE ASP SEQRES 12 A 373 ILE LYS THR ASN LYS PRO VAL ILE PHE THR LYS SER ASN SEQRES 13 A 373 LEU ALA ASN SER PRO GLU LEU ASP ALA LYS MET TYR ASP SEQRES 14 A 373 ILE SER TYR SER THR ALA ALA ALA PRO THR TYR PHE PRO SEQRES 15 A 373 PRO HIS TYR PHE VAL THR ASN THR SER ASN GLY ASP GLU SEQRES 16 A 373 TYR GLU PHE ASN LEU VAL ASP GLY ALA VAL ALA THR VAL SEQRES 17 A 373 ALA ASP PRO ALA LEU LEU SER ILE SER VAL ALA THR ARG SEQRES 18 A 373 LEU ALA GLN LYS ASP PRO ALA PHE ALA SER ILE ARG SER SEQRES 19 A 373 LEU ASN TYR LYS LYS MET LEU LEU LEU SER LEU GLY THR SEQRES 20 A 373 GLY THR THR SER GLU PHE ASP LYS THR TYR THR ALA LYS SEQRES 21 A 373 GLU ALA ALA THR TRP THR ALA VAL HIS TRP MET LEU VAL SEQRES 22 A 373 ILE GLN LYS MET THR ASP ALA ALA SER SER TYR MET THR SEQRES 23 A 373 ASP TYR TYR LEU SER THR ALA PHE GLN ALA LEU ASP SER SEQRES 24 A 373 LYS ASN ASN TYR LEU ARG VAL GLN GLU ASN ALA LEU THR SEQRES 25 A 373 GLY THR THR THR GLU MET ASP ASP ALA SER GLU ALA ASN SEQRES 26 A 373 MET GLU LEU LEU VAL GLN VAL GLY GLU ASN LEU LEU LYS SEQRES 27 A 373 LYS PRO VAL SER GLU ASP ASN PRO GLU THR TYR GLU GLU SEQRES 28 A 373 ALA LEU LYS ARG PHE ALA LYS LEU LEU SER ASP ARG LYS SEQRES 29 A 373 LYS LEU ARG ALA ASN LYS ALA SER TYR FORMUL 2 HOH *127(H2 O) HELIX 1 AA1 GLY A 37 ARG A 40 5 4 HELIX 2 AA2 GLY A 41 ASP A 59 1 19 HELIX 3 AA3 ARG A 65 TYR A 69 5 5 HELIX 4 AA4 SER A 77 THR A 88 1 12 HELIX 5 AA5 ALA A 98 LYS A 100 5 3 HELIX 6 AA6 GLU A 101 PHE A 114 1 14 HELIX 7 AA7 GLY A 127 GLY A 139 1 13 HELIX 8 AA8 ARG A 142 ALA A 146 5 5 HELIX 9 AA9 SER A 173 ASP A 177 5 5 HELIX 10 AB1 LYS A 179 ALA A 189 1 11 HELIX 11 AB2 ALA A 217 THR A 220 5 4 HELIX 12 AB3 PRO A 224 ALA A 236 1 13 HELIX 13 AB4 GLN A 237 LYS A 238 5 2 HELIX 14 AB5 ASP A 239 ARG A 246 5 8 HELIX 15 AB6 ASN A 249 LYS A 251 5 3 HELIX 16 AB7 GLU A 265 THR A 269 5 5 HELIX 17 AB8 THR A 271 ALA A 276 1 6 HELIX 18 AB9 THR A 279 LEU A 310 1 32 HELIX 19 AC1 SER A 312 ASN A 314 5 3 HELIX 20 AC2 THR A 325 GLU A 330 5 6 HELIX 21 AC3 SER A 335 LYS A 352 1 18 HELIX 22 AC4 TYR A 362 ASN A 382 1 21 SHEET 1 AA1 4 LYS A 161 PHE A 165 0 SHEET 2 AA1 4 GLU A 149 ASP A 156 -1 N ILE A 152 O PHE A 165 SHEET 3 AA1 4 GLU A 208 ASP A 215 -1 O VAL A 214 N PHE A 155 SHEET 4 AA1 4 HIS A 197 ASN A 202 -1 N HIS A 197 O LEU A 213 SHEET 1 AA2 6 LYS A 161 PHE A 165 0 SHEET 2 AA2 6 GLU A 149 ASP A 156 -1 N ILE A 152 O PHE A 165 SHEET 3 AA2 6 VAL A 72 GLY A 75 1 N ILE A 73 O GLU A 149 SHEET 4 AA2 6 VAL A 29 ILE A 34 1 N LEU A 32 O GLY A 74 SHEET 5 AA2 6 MET A 253 LEU A 258 1 O LEU A 258 N SER A 33 SHEET 6 AA2 6 TYR A 316 VAL A 319 1 O LEU A 317 N SER A 257 SHEET 1 AA3 2 PRO A 353 SER A 355 0 SHEET 2 AA3 2 ASN A 358 THR A 361 -1 O GLU A 360 N VAL A 354 CRYST1 53.316 53.316 244.947 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018756 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018756 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004083 0.00000