HEADER TRANSPORT PROTEIN 23-FEB-14 4PO0 TITLE CRYSTAL STRUCTURE OF LEPORINE SERUM ALBUMIN IN COMPLEX WITH NAPROXEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM ALBUMIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-608, MATURE FORM OF LEPORINE SERUM ALBUMIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 STRAIN: THORBECKE KEYWDS LEPORINE SERUM ALBUMIN, LSA, HELICAL PROTEIN POSSESSING THREE KEYWDS 2 DOMAINS., TRANSPORT PROTEIN., FATTY ACIDS, HORMONES, METABOLITES, KEYWDS 3 DRUGS, NAPROXEN., PLASMA, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.ZIELINSKI,A.BUJACZ,B.SEKULA,G.BUJACZ REVDAT 3 20-SEP-23 4PO0 1 REMARK REVDAT 2 10-SEP-14 4PO0 1 JRNL REVDAT 1 04-JUN-14 4PO0 0 JRNL AUTH A.BUJACZ,K.ZIELINSKI,B.SEKULA JRNL TITL STRUCTURAL STUDIES OF BOVINE, EQUINE, AND LEPORINE SERUM JRNL TITL 2 ALBUMIN COMPLEXES WITH NAPROXEN. JRNL REF PROTEINS V. 82 2199 2014 JRNL REFN ISSN 0887-3585 JRNL PMID 24753230 JRNL DOI 10.1002/PROT.24583 REMARK 2 REMARK 2 RESOLUTION. 2.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15981 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 843 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1163 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3100 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.4440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4623 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.06000 REMARK 3 B22 (A**2) : 0.96000 REMARK 3 B33 (A**2) : -2.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.395 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.274 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.007 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4817 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6532 ; 2.056 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 588 ; 7.014 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 221 ;38.134 ;24.706 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 851 ;22.447 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;20.846 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 713 ; 0.128 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3636 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2337 ; 3.941 ; 4.519 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2921 ; 5.974 ; 6.767 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2480 ; 4.691 ; 4.711 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7998 ; 9.712 ;38.387 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 39.0271 19.6276 86.2701 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.0877 REMARK 3 T33: 0.1449 T12: -0.0250 REMARK 3 T13: 0.0452 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.9871 L22: 1.6904 REMARK 3 L33: 1.3454 L12: -0.0921 REMARK 3 L13: -0.3435 L23: -1.3369 REMARK 3 S TENSOR REMARK 3 S11: 0.1139 S12: 0.0663 S13: 0.0143 REMARK 3 S21: 0.0531 S22: -0.0275 S23: 0.2223 REMARK 3 S31: -0.0274 S32: -0.0635 S33: -0.0864 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 57.3476 29.9705 82.8026 REMARK 3 T TENSOR REMARK 3 T11: 0.1801 T22: 0.0092 REMARK 3 T33: 0.1364 T12: -0.0078 REMARK 3 T13: -0.0940 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.4748 L22: 0.3682 REMARK 3 L33: 1.8804 L12: -0.2522 REMARK 3 L13: 0.5788 L23: 0.5905 REMARK 3 S TENSOR REMARK 3 S11: -0.1239 S12: -0.0632 S13: 0.1008 REMARK 3 S21: -0.0349 S22: 0.0564 S23: -0.0805 REMARK 3 S31: -0.3436 S32: 0.0216 S33: 0.0675 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 148 A 198 REMARK 3 ORIGIN FOR THE GROUP (A): 62.7906 22.7535 76.3487 REMARK 3 T TENSOR REMARK 3 T11: 0.0281 T22: 0.0686 REMARK 3 T33: 0.1418 T12: -0.0208 REMARK 3 T13: -0.0351 T23: 0.0380 REMARK 3 L TENSOR REMARK 3 L11: 0.9903 L22: 0.2673 REMARK 3 L33: 1.6740 L12: -0.4242 REMARK 3 L13: 0.8013 L23: -0.0686 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: 0.2158 S13: 0.1629 REMARK 3 S21: 0.0212 S22: -0.0721 S23: -0.0828 REMARK 3 S31: -0.0431 S32: 0.1708 S33: 0.1133 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 199 A 250 REMARK 3 ORIGIN FOR THE GROUP (A): 47.4701 8.4805 63.4494 REMARK 3 T TENSOR REMARK 3 T11: 0.0592 T22: 0.0590 REMARK 3 T33: 0.0821 T12: -0.0144 REMARK 3 T13: 0.0000 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.1973 L22: 0.1915 REMARK 3 L33: 0.7379 L12: -0.0330 REMARK 3 L13: -0.1521 L23: 0.0399 REMARK 3 S TENSOR REMARK 3 S11: -0.0292 S12: -0.0042 S13: -0.0404 REMARK 3 S21: -0.0084 S22: -0.0025 S23: 0.1161 REMARK 3 S31: -0.0159 S32: 0.0856 S33: 0.0317 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 251 A 295 REMARK 3 ORIGIN FOR THE GROUP (A): 57.9278 3.5642 72.1920 REMARK 3 T TENSOR REMARK 3 T11: 0.0802 T22: 0.0852 REMARK 3 T33: 0.0802 T12: 0.0213 REMARK 3 T13: -0.0147 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.1520 L22: 1.7535 REMARK 3 L33: 0.5712 L12: 0.0304 REMARK 3 L13: -0.1390 L23: 0.8517 REMARK 3 S TENSOR REMARK 3 S11: -0.0897 S12: 0.0186 S13: -0.0565 REMARK 3 S21: 0.1177 S22: 0.1216 S23: -0.1366 REMARK 3 S31: 0.1378 S32: 0.0417 S33: -0.0319 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 296 A 336 REMARK 3 ORIGIN FOR THE GROUP (A): 49.0067 -1.3591 46.8790 REMARK 3 T TENSOR REMARK 3 T11: 0.0348 T22: 0.1118 REMARK 3 T33: 0.0592 T12: 0.0298 REMARK 3 T13: -0.0160 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 3.4831 L22: 0.4252 REMARK 3 L33: 0.8452 L12: -1.1286 REMARK 3 L13: 0.6529 L23: -0.0082 REMARK 3 S TENSOR REMARK 3 S11: 0.0592 S12: -0.0611 S13: -0.1054 REMARK 3 S21: -0.0271 S22: -0.0127 S23: 0.0240 REMARK 3 S31: -0.0029 S32: -0.0660 S33: -0.0465 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 337 A 366 REMARK 3 ORIGIN FOR THE GROUP (A): 47.7646 8.2410 43.4822 REMARK 3 T TENSOR REMARK 3 T11: 0.0894 T22: 0.0893 REMARK 3 T33: 0.1067 T12: 0.0667 REMARK 3 T13: 0.0011 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.4177 L22: 0.2217 REMARK 3 L33: 1.6353 L12: -0.1768 REMARK 3 L13: -0.3007 L23: -0.3291 REMARK 3 S TENSOR REMARK 3 S11: 0.1435 S12: 0.1119 S13: 0.1178 REMARK 3 S21: -0.0950 S22: -0.0984 S23: -0.0570 REMARK 3 S31: 0.0221 S32: 0.1045 S33: -0.0451 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 367 A 398 REMARK 3 ORIGIN FOR THE GROUP (A): 58.5862 17.8406 41.8713 REMARK 3 T TENSOR REMARK 3 T11: 0.0829 T22: 0.1902 REMARK 3 T33: 0.0605 T12: -0.0201 REMARK 3 T13: 0.0670 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 2.5302 L22: 4.7629 REMARK 3 L33: 1.7148 L12: 3.2975 REMARK 3 L13: 2.0749 L23: 2.7822 REMARK 3 S TENSOR REMARK 3 S11: -0.1654 S12: 0.3483 S13: -0.0025 REMARK 3 S21: -0.2626 S22: 0.1975 S23: -0.0533 REMARK 3 S31: -0.1363 S32: 0.2477 S33: -0.0321 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 399 A 417 REMARK 3 ORIGIN FOR THE GROUP (A): 58.1427 37.8650 53.3672 REMARK 3 T TENSOR REMARK 3 T11: 0.0526 T22: 0.1252 REMARK 3 T33: 0.1551 T12: 0.0171 REMARK 3 T13: 0.0561 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.0985 L22: 0.2448 REMARK 3 L33: 1.1284 L12: -0.0328 REMARK 3 L13: -0.2832 L23: 0.3648 REMARK 3 S TENSOR REMARK 3 S11: 0.0678 S12: 0.0085 S13: 0.0991 REMARK 3 S21: -0.0254 S22: 0.1386 S23: 0.0310 REMARK 3 S31: -0.2032 S32: 0.1345 S33: -0.2063 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 418 A 468 REMARK 3 ORIGIN FOR THE GROUP (A): 56.1779 27.4900 58.1026 REMARK 3 T TENSOR REMARK 3 T11: 0.0326 T22: 0.0666 REMARK 3 T33: 0.1183 T12: 0.0074 REMARK 3 T13: 0.0325 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.9058 L22: 0.0427 REMARK 3 L33: 1.5333 L12: 0.1892 REMARK 3 L13: -0.1976 L23: -0.0822 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: -0.0039 S13: -0.0663 REMARK 3 S21: -0.0063 S22: 0.0415 S23: -0.0045 REMARK 3 S31: -0.0015 S32: 0.0975 S33: -0.0288 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 469 A 497 REMARK 3 ORIGIN FOR THE GROUP (A): 45.3006 30.6831 49.6472 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.1219 REMARK 3 T33: 0.1448 T12: 0.0521 REMARK 3 T13: 0.0004 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.4564 L22: 0.2403 REMARK 3 L33: 1.5394 L12: 0.4735 REMARK 3 L13: 1.3994 L23: 0.5845 REMARK 3 S TENSOR REMARK 3 S11: 0.0872 S12: 0.1550 S13: -0.0615 REMARK 3 S21: -0.0227 S22: -0.0388 S23: -0.0136 REMARK 3 S31: 0.0100 S32: 0.0113 S33: -0.0484 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 498 A 537 REMARK 3 ORIGIN FOR THE GROUP (A): 57.3465 49.0171 62.3718 REMARK 3 T TENSOR REMARK 3 T11: 0.3346 T22: 0.1911 REMARK 3 T33: 0.1768 T12: -0.1075 REMARK 3 T13: 0.1729 T23: -0.1291 REMARK 3 L TENSOR REMARK 3 L11: 4.2291 L22: 2.3201 REMARK 3 L33: 2.9462 L12: -2.3769 REMARK 3 L13: 3.1769 L23: -2.0785 REMARK 3 S TENSOR REMARK 3 S11: -0.3115 S12: -0.3422 S13: 0.3725 REMARK 3 S21: 0.3091 S22: 0.2918 S23: -0.1606 REMARK 3 S31: -0.6415 S32: -0.0676 S33: 0.0197 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 538 A 584 REMARK 3 ORIGIN FOR THE GROUP (A): 64.3763 55.8241 60.4603 REMARK 3 T TENSOR REMARK 3 T11: 0.3067 T22: 0.3820 REMARK 3 T33: 0.3609 T12: -0.0965 REMARK 3 T13: 0.1378 T23: -0.0988 REMARK 3 L TENSOR REMARK 3 L11: 1.9782 L22: 2.4345 REMARK 3 L33: 5.2540 L12: -1.7172 REMARK 3 L13: 2.8409 L23: -1.9476 REMARK 3 S TENSOR REMARK 3 S11: -0.3762 S12: -0.2599 S13: 0.4455 REMARK 3 S21: 0.2877 S22: 0.0200 S23: -0.2782 REMARK 3 S31: -0.9488 S32: -0.0568 S33: 0.3561 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4PO0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000085006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8015 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR SI REMARK 200 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16825 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.730 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.290 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : 0.12100 REMARK 200 FOR THE DATA SET : 15.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.33 REMARK 200 R MERGE FOR SHELL (I) : 0.97200 REMARK 200 R SYM FOR SHELL (I) : 0.01040 REMARK 200 FOR SHELL : 2.440 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID BODY REFINEMENT OF REMARK 200 THE NATIVE STRUCTURE REMARK 200 SOFTWARE USED: REFMAC 5.7.0032 REMARK 200 STARTING MODEL: PDB ENTRY 4F5V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 3350, 8% PPG 400, 0.2 M REMARK 280 AMMONIUM ACETATE, 0.1 M TRIS PH 7.5., VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.22000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.44000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.89500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.44000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.22000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.89500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 -6.76 76.50 REMARK 500 ARG A 81 124.41 -29.81 REMARK 500 TYR A 84 -70.28 -62.84 REMARK 500 LYS A 109 61.48 -155.06 REMARK 500 ASP A 130 100.66 -161.87 REMARK 500 PRO A 147 5.58 -55.97 REMARK 500 TYR A 150 101.37 -58.01 REMARK 500 GLU A 170 39.99 -140.94 REMARK 500 THR A 467 65.12 -106.47 REMARK 500 PHE A 502 80.87 -67.68 REMARK 500 THR A 506 0.17 -62.87 REMARK 500 ALA A 511 -33.79 -39.10 REMARK 500 CYS A 559 43.65 -101.71 REMARK 500 GLU A 562 -76.58 -91.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NPS A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NPS A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NPS A 603 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F5V RELATED DB: PDB REMARK 900 LEPORINE SERUM ALBUMIN DBREF 4PO0 A 1 584 UNP G1U9S2 G1U9S2_RABIT 26 609 SEQRES 1 A 584 GLU ALA HIS LYS SER GLU ILE ALA HIS ARG PHE ASN ASP SEQRES 2 A 584 VAL GLY GLU GLU HIS PHE ILE GLY LEU VAL LEU ILE THR SEQRES 3 A 584 PHE SER GLN TYR LEU GLN LYS CYS PRO TYR GLU GLU HIS SEQRES 4 A 584 ALA LYS LEU VAL LYS GLU VAL THR ASP LEU ALA LYS ALA SEQRES 5 A 584 CYS VAL ALA ASP GLU SER ALA ALA ASN CYS ASP LYS SER SEQRES 6 A 584 LEU HIS ASP ILE PHE GLY ASP LYS ILE CYS ALA LEU PRO SEQRES 7 A 584 SER LEU ARG ASP THR TYR GLY ASP VAL ALA ASP CYS CYS SEQRES 8 A 584 GLU LYS LYS GLU PRO GLU ARG ASN GLU CYS PHE LEU HIS SEQRES 9 A 584 HIS LYS ASP ASP LYS PRO ASP LEU PRO PRO PHE ALA ARG SEQRES 10 A 584 PRO GLU ALA ASP VAL LEU CYS LYS ALA PHE HIS ASP ASP SEQRES 11 A 584 GLU LYS ALA PHE PHE GLY HIS TYR LEU TYR GLU VAL ALA SEQRES 12 A 584 ARG ARG HIS PRO TYR PHE TYR ALA PRO GLU LEU LEU TYR SEQRES 13 A 584 TYR ALA GLN LYS TYR LYS ALA ILE LEU THR GLU CYS CYS SEQRES 14 A 584 GLU ALA ALA ASP LYS GLY ALA CYS LEU THR PRO LYS LEU SEQRES 15 A 584 ASP ALA LEU LYS GLU LYS ALA LEU ILE SER ALA ALA GLN SEQRES 16 A 584 GLU ARG LEU ARG CYS ALA SER ILE GLN LYS PHE GLY ASP SEQRES 17 A 584 ARG ALA TYR LYS ALA TRP ALA LEU VAL ARG LEU SER GLN SEQRES 18 A 584 ARG PHE PRO LYS ALA ASP PHE THR ASP ILE SER LYS ILE SEQRES 19 A 584 VAL THR ASP LEU THR LYS VAL HIS LYS GLU CYS CYS HIS SEQRES 20 A 584 GLY ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU SEQRES 21 A 584 ALA LYS TYR MET CYS GLU HIS GLN GLU THR ILE SER SER SEQRES 22 A 584 HIS LEU LYS GLU CYS CYS ASP LYS PRO ILE LEU GLU LYS SEQRES 23 A 584 ALA HIS CYS ILE TYR GLY LEU HIS ASN ASP GLU THR PRO SEQRES 24 A 584 ALA GLY LEU PRO ALA VAL ALA GLU GLU PHE VAL GLU ASP SEQRES 25 A 584 LYS ASP VAL CYS LYS ASN TYR GLU GLU ALA LYS ASP LEU SEQRES 26 A 584 PHE LEU GLY LYS PHE LEU TYR GLU TYR SER ARG ARG HIS SEQRES 27 A 584 PRO ASP TYR SER VAL VAL LEU LEU LEU ARG LEU GLY LYS SEQRES 28 A 584 ALA TYR GLU ALA THR LEU LYS LYS CYS CYS ALA THR ASP SEQRES 29 A 584 ASP PRO HIS ALA CYS TYR ALA LYS VAL LEU ASP GLU PHE SEQRES 30 A 584 GLN PRO LEU VAL ASP GLU PRO LYS ASN LEU VAL LYS GLN SEQRES 31 A 584 ASN CYS GLU LEU TYR GLU GLN LEU GLY ASP TYR ASN PHE SEQRES 32 A 584 GLN ASN ALA LEU LEU VAL ARG TYR THR LYS LYS VAL PRO SEQRES 33 A 584 GLN VAL SER THR PRO THR LEU VAL GLU ILE SER ARG SER SEQRES 34 A 584 LEU GLY LYS VAL GLY SER LYS CYS CYS LYS HIS PRO GLU SEQRES 35 A 584 ALA GLU ARG LEU PRO CYS VAL GLU ASP TYR LEU SER VAL SEQRES 36 A 584 VAL LEU ASN ARG LEU CYS VAL LEU HIS GLU LYS THR PRO SEQRES 37 A 584 VAL SER GLU LYS VAL THR LYS CYS CYS SER GLU SER LEU SEQRES 38 A 584 VAL ASP ARG ARG PRO CYS PHE SER ALA LEU GLY PRO ASP SEQRES 39 A 584 GLU THR TYR VAL PRO LYS GLU PHE ASN ALA GLU THR PHE SEQRES 40 A 584 THR PHE HIS ALA ASP ILE CYS THR LEU PRO GLU THR GLU SEQRES 41 A 584 ARG LYS ILE LYS LYS GLN THR ALA LEU VAL GLU LEU VAL SEQRES 42 A 584 LYS HIS LYS PRO HIS ALA THR ASN ASP GLN LEU LYS THR SEQRES 43 A 584 VAL VAL GLY GLU PHE THR ALA LEU LEU ASP LYS CYS CYS SEQRES 44 A 584 SER ALA GLU ASP LYS GLU ALA CYS PHE ALA VAL GLU GLY SEQRES 45 A 584 PRO LYS LEU VAL GLU SER SER LYS ALA THR LEU GLY HET NPS A 601 17 HET NPS A 602 17 HET NPS A 603 17 HETNAM NPS (2S)-2-(6-METHOXYNAPHTHALEN-2-YL)PROPANOIC ACID HETSYN NPS NAPROXEN FORMUL 2 NPS 3(C14 H14 O3) FORMUL 5 HOH *121(H2 O) HELIX 1 1 SER A 5 GLY A 15 1 11 HELIX 2 2 GLY A 15 LEU A 31 1 17 HELIX 3 3 PRO A 35 ASP A 56 1 22 HELIX 4 4 SER A 65 ALA A 76 1 12 HELIX 5 5 VAL A 87 LYS A 93 1 7 HELIX 6 6 PRO A 96 HIS A 105 1 10 HELIX 7 7 GLU A 119 ASP A 130 1 12 HELIX 8 8 ASP A 130 ARG A 144 1 15 HELIX 9 9 TYR A 150 CYS A 169 1 20 HELIX 10 10 ASP A 173 GLY A 207 1 35 HELIX 11 11 GLY A 207 PHE A 223 1 17 HELIX 12 12 ASP A 227 HIS A 247 1 21 HELIX 13 13 ASP A 249 HIS A 267 1 19 HELIX 14 14 GLN A 268 ILE A 271 5 4 HELIX 15 15 SER A 272 HIS A 274 5 3 HELIX 16 16 LEU A 275 ASP A 280 1 6 HELIX 17 17 PRO A 282 GLY A 292 1 11 HELIX 18 18 ALA A 304 GLU A 311 1 8 HELIX 19 19 ASP A 314 ALA A 322 1 9 HELIX 20 20 ALA A 322 ARG A 337 1 16 HELIX 21 21 SER A 342 ALA A 362 1 21 HELIX 22 22 ASP A 365 ALA A 371 1 7 HELIX 23 23 LEU A 374 GLU A 376 5 3 HELIX 24 24 PHE A 377 VAL A 415 1 39 HELIX 25 25 SER A 419 CYS A 438 1 20 HELIX 26 26 PRO A 441 THR A 467 1 27 HELIX 27 27 SER A 470 SER A 480 1 11 HELIX 28 28 ASP A 483 LEU A 491 1 9 HELIX 29 29 ASN A 503 THR A 508 5 6 HELIX 30 30 HIS A 510 LEU A 516 5 7 HELIX 31 31 PRO A 517 LYS A 536 1 20 HELIX 32 32 THR A 540 CYS A 559 1 20 HELIX 33 33 LYS A 564 GLY A 584 1 21 SSBOND 1 CYS A 53 CYS A 62 1555 1555 1.97 SSBOND 2 CYS A 75 CYS A 91 1555 1555 2.02 SSBOND 3 CYS A 90 CYS A 101 1555 1555 2.00 SSBOND 4 CYS A 124 CYS A 169 1555 1555 2.06 SSBOND 5 CYS A 168 CYS A 177 1555 1555 2.03 SSBOND 6 CYS A 200 CYS A 246 1555 1555 2.06 SSBOND 7 CYS A 245 CYS A 253 1555 1555 2.02 SSBOND 8 CYS A 265 CYS A 279 1555 1555 2.01 SSBOND 9 CYS A 278 CYS A 289 1555 1555 2.08 SSBOND 10 CYS A 316 CYS A 361 1555 1555 2.02 SSBOND 11 CYS A 360 CYS A 369 1555 1555 2.03 SSBOND 12 CYS A 392 CYS A 438 1555 1555 2.01 SSBOND 13 CYS A 437 CYS A 448 1555 1555 2.06 SSBOND 14 CYS A 461 CYS A 477 1555 1555 2.04 SSBOND 15 CYS A 476 CYS A 487 1555 1555 2.04 SSBOND 16 CYS A 514 CYS A 559 1555 1555 2.06 SSBOND 17 CYS A 558 CYS A 567 1555 1555 2.00 CISPEP 1 GLU A 95 PRO A 96 0 -1.55 SITE 1 AC1 9 ASN A 391 CYS A 392 ARG A 410 TYR A 411 SITE 2 AC1 9 LYS A 414 VAL A 449 LEU A 453 PHE A 488 SITE 3 AC1 9 SER A 489 SITE 1 AC2 8 ARG A 209 ALA A 213 GLY A 328 LEU A 331 SITE 2 AC2 8 GLY A 350 HOH A 789 HOH A 817 HOH A 819 SITE 1 AC3 7 LEU A 398 ASN A 405 ASN A 541 LEU A 544 SITE 2 AC3 7 LYS A 545 VAL A 548 HOH A 804 CRYST1 74.440 79.790 102.880 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013434 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012533 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009720 0.00000