HEADER PROTEIN BINDING 27-FEB-14 4PPP TITLE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN TITLE 2 IN COMPLEX WITH FLUORO-RESVERATROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN (UNP RESIDUES 305-548); COMPND 5 SYNONYM: ESTROGEN RECEPTOR ALPHA, ER, ER-ALPHA, ESTRADIOL RECEPTOR, COMPND 6 NUCLEAR RECEPTOR SUBFAMILY 3 GROUP A MEMBER 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 11 CHAIN: C, D; COMPND 12 FRAGMENT: RECEPTOR-INTERACTING PEPTIDE (UNP RESIDUES 688-696); COMPND 13 SYNONYM: NCOA-2, CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 75, BHLHE75, COMPND 14 TRANSCRIPTIONAL INTERMEDIARY FACTOR 2, HTIF2; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR, ESR1, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR HORMONE RECEPTOR, TRANSCRIPTION FACTOR, LIGAND-BINDING, KEYWDS 2 NUCLEUS, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.C.NWACHUKWU,S.SRINIVASAN,N.E.BRUNO,A.A.PARENT,T.S.HUGHES, AUTHOR 2 J.A.POLLOCK,O.GJYSHI,V.CAVETT,J.NOWAK,R.D.GARCIA-ORDONEZ,R.HOUTMAN, AUTHOR 3 P.R.GRIFFIN,D.J.KOJETIN,J.A.KATZENELLENBOGEN,M.D.CONKRIGHT, AUTHOR 4 K.W.NETTLES REVDAT 3 20-SEP-23 4PPP 1 REMARK SEQADV REVDAT 2 11-JUN-14 4PPP 1 JRNL REVDAT 1 07-MAY-14 4PPP 0 JRNL AUTH J.C.NWACHUKWU,S.SRINIVASAN,N.E.BRUNO,A.A.PARENT,T.S.HUGHES, JRNL AUTH 2 J.A.POLLOCK,O.GJYSHI,V.CAVETT,J.NOWAK,R.D.GARCIA-ORDONEZ, JRNL AUTH 3 R.HOUTMAN,P.R.GRIFFIN,D.J.KOJETIN,J.A.KATZENELLENBOGEN, JRNL AUTH 4 M.D.CONKRIGHT,K.W.NETTLES JRNL TITL RESVERATROL MODULATES THE INFLAMMATORY RESPONSE VIA AN JRNL TITL 2 ESTROGEN RECEPTOR-SIGNAL INTEGRATION NETWORK. JRNL REF ELIFE V. 3 02057 2014 JRNL REFN ESSN 2050-084X JRNL PMID 24771768 JRNL DOI 10.7554/ELIFE.02057 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.1 REMARK 3 NUMBER OF REFLECTIONS : 11433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2537 - 5.3696 0.98 1505 167 0.1945 0.1980 REMARK 3 2 5.3696 - 4.2629 0.99 1503 164 0.1694 0.2345 REMARK 3 3 4.2629 - 3.7244 0.95 1441 159 0.1793 0.2360 REMARK 3 4 3.7244 - 3.3839 0.96 1452 159 0.2034 0.2419 REMARK 3 5 3.3839 - 3.1415 0.95 1427 157 0.2279 0.3176 REMARK 3 6 3.1415 - 2.9563 0.92 1380 165 0.2382 0.3122 REMARK 3 7 2.9563 - 2.8082 0.70 1024 120 0.2531 0.3063 REMARK 3 8 2.8082 - 2.6860 0.36 553 57 0.2749 0.3474 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3833 REMARK 3 ANGLE : 0.560 5193 REMARK 3 CHIRALITY : 0.022 618 REMARK 3 PLANARITY : 0.002 642 REMARK 3 DIHEDRAL : 14.034 1373 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 305:369) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7143 7.6250 -3.0988 REMARK 3 T TENSOR REMARK 3 T11: 0.3820 T22: 0.3355 REMARK 3 T33: 0.2419 T12: -0.0062 REMARK 3 T13: 0.0144 T23: 0.0651 REMARK 3 L TENSOR REMARK 3 L11: 7.5174 L22: 3.9944 REMARK 3 L33: 5.4413 L12: -1.0589 REMARK 3 L13: -1.6042 L23: 1.7527 REMARK 3 S TENSOR REMARK 3 S11: 0.1899 S12: 0.8078 S13: 0.2762 REMARK 3 S21: -0.4369 S22: -0.2168 S23: -0.3923 REMARK 3 S31: -0.3466 S32: -0.3043 S33: 0.0290 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 370:435) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8438 -2.5884 4.4396 REMARK 3 T TENSOR REMARK 3 T11: 0.3853 T22: 0.2641 REMARK 3 T33: 0.2576 T12: 0.0296 REMARK 3 T13: 0.0245 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 6.2395 L22: 6.5924 REMARK 3 L33: 7.0547 L12: -1.2627 REMARK 3 L13: -2.5664 L23: 0.2935 REMARK 3 S TENSOR REMARK 3 S11: -0.3720 S12: 0.3397 S13: -0.6816 REMARK 3 S21: 0.5668 S22: 0.0539 S23: -0.2433 REMARK 3 S31: 1.1683 S32: -0.0681 S33: 0.1886 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 436:548) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6651 6.1318 7.6314 REMARK 3 T TENSOR REMARK 3 T11: 0.2358 T22: 0.3085 REMARK 3 T33: 0.1220 T12: 0.0377 REMARK 3 T13: -0.0476 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 7.3072 L22: 4.2317 REMARK 3 L33: 6.7942 L12: 0.6962 REMARK 3 L13: -2.4104 L23: 1.1187 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: 0.1549 S13: 0.1927 REMARK 3 S21: 0.1476 S22: -0.1261 S23: -0.1225 REMARK 3 S31: 0.0121 S32: -0.1713 S33: 0.0873 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 309:458) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2005 6.2756 31.4793 REMARK 3 T TENSOR REMARK 3 T11: 0.3488 T22: 0.2831 REMARK 3 T33: 0.2119 T12: 0.0056 REMARK 3 T13: 0.0461 T23: -0.0745 REMARK 3 L TENSOR REMARK 3 L11: 5.5421 L22: 4.0767 REMARK 3 L33: 10.7153 L12: -0.4866 REMARK 3 L13: -0.5543 L23: 0.1784 REMARK 3 S TENSOR REMARK 3 S11: -0.2639 S12: -0.3881 S13: 0.0518 REMARK 3 S21: 0.4274 S22: 0.0783 S23: -0.0837 REMARK 3 S31: 0.0630 S32: 0.2793 S33: 0.1112 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 459:469) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4000 -12.9654 14.6022 REMARK 3 T TENSOR REMARK 3 T11: 1.5722 T22: 1.0452 REMARK 3 T33: 0.7372 T12: 0.0761 REMARK 3 T13: 0.4973 T23: 0.0748 REMARK 3 L TENSOR REMARK 3 L11: 1.9295 L22: 2.5950 REMARK 3 L33: 0.2606 L12: -1.3795 REMARK 3 L13: 0.6550 L23: -0.2996 REMARK 3 S TENSOR REMARK 3 S11: 0.6915 S12: 1.1380 S13: 0.6369 REMARK 3 S21: -0.1618 S22: -0.5771 S23: -0.2022 REMARK 3 S31: -0.0559 S32: 0.4885 S33: -0.1523 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 470:548) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1365 3.2010 21.6809 REMARK 3 T TENSOR REMARK 3 T11: 0.3371 T22: 0.3403 REMARK 3 T33: 0.2627 T12: 0.0185 REMARK 3 T13: 0.0595 T23: -0.0364 REMARK 3 L TENSOR REMARK 3 L11: 3.9594 L22: 4.1645 REMARK 3 L33: 7.3655 L12: -0.3377 REMARK 3 L13: -1.1187 L23: 0.3192 REMARK 3 S TENSOR REMARK 3 S11: -0.1777 S12: -0.1921 S13: -0.2738 REMARK 3 S21: 0.2774 S22: -0.0804 S23: -0.0590 REMARK 3 S31: 0.7533 S32: -0.0949 S33: 0.1147 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PPP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000085067. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT CUBE I-BEAM REMARK 200 SINGLE CRYSTAL, ASYMMETRIC CUT REMARK 200 4.965 DEGREES REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11884 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.684 REMARK 200 RESOLUTION RANGE LOW (A) : 46.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.5 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 36.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 2QA8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG3350, 0.05 M MAGNESIUM REMARK 280 CHLORIDE, 0.067 M SODIUM CHLORIDE, 0.1 M TRIS, PH 8.3, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.96500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 331 REMARK 465 ASP A 332 REMARK 465 PRO A 333 REMARK 465 THR A 334 REMARK 465 ARG A 335 REMARK 465 PRO A 336 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 LEU A 469 REMARK 465 GLU A 470 REMARK 465 GLU A 471 REMARK 465 SER B 305 REMARK 465 LEU B 306 REMARK 465 ALA B 307 REMARK 465 LEU B 308 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 GLN C 695 REMARK 465 ASP C 696 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 306 CG CD1 CD2 REMARK 470 GLU A 339 CG CD OE1 OE2 REMARK 470 LEU A 370 CG CD1 CD2 REMARK 470 ARG A 412 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 413 CG OD1 ND2 REMARK 470 LYS A 416 CG CD CE NZ REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 ASP A 473 CG OD1 OD2 REMARK 470 LYS A 531 CG CD CE NZ REMARK 470 ARG A 548 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 337 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 339 CG CD OE1 OE2 REMARK 470 LYS B 362 CG CD CE NZ REMARK 470 LEU B 372 CG CD1 CD2 REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 GLU B 423 CG CD OE1 OE2 REMARK 470 LYS B 467 CG CD CE NZ REMARK 470 GLU B 470 CG CD OE1 OE2 REMARK 470 ARG B 477 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 523 CG CD OE1 OE2 REMARK 470 LYS B 529 CG CD CE NZ REMARK 470 LYS B 531 CG CD CE NZ REMARK 470 ASP B 538 CG OD1 OD2 REMARK 470 LEU B 541 CG CD1 CD2 REMARK 470 ARG B 548 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 688 CG CD CE NZ REMARK 470 ARG C 692 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 688 CG CD CE NZ REMARK 470 ARG D 692 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 695 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 321 O HOH A 714 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 309 30.96 -95.89 REMARK 500 CYS A 530 -78.95 58.80 REMARK 500 LYS A 531 77.32 -67.91 REMARK 500 HIS A 547 53.50 -97.01 REMARK 500 PRO B 333 38.46 -62.24 REMARK 500 PRO B 336 -175.07 -69.74 REMARK 500 SER B 338 -157.37 -96.55 REMARK 500 SER B 468 -74.11 84.18 REMARK 500 LEU B 469 -103.05 45.43 REMARK 500 HIS B 547 47.89 -95.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FSV A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FSV B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PP6 RELATED DB: PDB REMARK 900 ESTROGEN RECEPTOR COMPLEXED WITH RESVERATROL REMARK 900 RELATED ID: 4PPS RELATED DB: PDB REMARK 900 ESTROGEN RECEPTOR COMPLEXED WITH A-CD RING ESTROGEN DERIVATIVE DBREF 4PPP A 305 548 UNP P03372 ESR1_HUMAN 305 548 DBREF 4PPP B 305 548 UNP P03372 ESR1_HUMAN 305 548 DBREF 4PPP C 688 696 UNP Q15596 NCOA2_HUMAN 688 696 DBREF 4PPP D 688 696 UNP Q15596 NCOA2_HUMAN 688 696 SEQADV 4PPP SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 4PPP SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 244 SER LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER SEQRES 2 A 244 ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU SEQRES 3 A 244 TYR ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET SEQRES 4 A 244 GLY LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS SEQRES 5 A 244 MET ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP SEQRES 6 A 244 LEU THR LEU HIS ASP GLN VAL HIS LEU LEU GLU CYS ALA SEQRES 7 A 244 TRP LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER SEQRES 8 A 244 MET GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU SEQRES 9 A 244 LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL GLU GLY MET SEQRES 10 A 244 VAL GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG SEQRES 11 A 244 PHE ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS SEQRES 12 A 244 LEU LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR SEQRES 13 A 244 PHE LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP SEQRES 14 A 244 HIS ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU SEQRES 15 A 244 ILE HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN SEQRES 16 A 244 GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER SEQRES 17 A 244 HIS ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU SEQRES 18 A 244 TYR SER MET LYS CYS LYS ASN VAL VAL PRO LEU SER ASP SEQRES 19 A 244 LEU LEU LEU GLU MET LEU ASP ALA HIS ARG SEQRES 1 B 244 SER LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER SEQRES 2 B 244 ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU SEQRES 3 B 244 TYR ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET SEQRES 4 B 244 GLY LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS SEQRES 5 B 244 MET ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP SEQRES 6 B 244 LEU THR LEU HIS ASP GLN VAL HIS LEU LEU GLU CYS ALA SEQRES 7 B 244 TRP LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER SEQRES 8 B 244 MET GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU SEQRES 9 B 244 LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL GLU GLY MET SEQRES 10 B 244 VAL GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG SEQRES 11 B 244 PHE ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS SEQRES 12 B 244 LEU LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR SEQRES 13 B 244 PHE LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP SEQRES 14 B 244 HIS ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU SEQRES 15 B 244 ILE HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN SEQRES 16 B 244 GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER SEQRES 17 B 244 HIS ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU SEQRES 18 B 244 TYR SER MET LYS CYS LYS ASN VAL VAL PRO LEU SER ASP SEQRES 19 B 244 LEU LEU LEU GLU MET LEU ASP ALA HIS ARG SEQRES 1 C 9 LYS ILE LEU HIS ARG LEU LEU GLN ASP SEQRES 1 D 9 LYS ILE LEU HIS ARG LEU LEU GLN ASP HET FSV A 601 36 HET FSV B 601 18 HETNAM FSV 5-[(E)-2-(3-FLUORO-4-HYDROXYPHENYL)ETHENYL]BENZENE-1,3- HETNAM 2 FSV DIOL HETSYN FSV FLUORO-RESVERATROL FORMUL 5 FSV 2(C14 H11 F O3) FORMUL 7 HOH *42(H2 O) HELIX 1 1 LEU A 306 LEU A 310 5 5 HELIX 2 2 THR A 311 ALA A 322 1 12 HELIX 3 3 SER A 338 LYS A 362 1 25 HELIX 4 4 THR A 371 SER A 395 1 25 HELIX 5 5 MET A 396 HIS A 398 5 3 HELIX 6 6 ASN A 413 VAL A 418 5 6 HELIX 7 7 GLY A 420 ASN A 439 1 20 HELIX 8 8 GLN A 441 SER A 456 1 16 HELIX 9 9 ASP A 473 ALA A 493 1 21 HELIX 10 10 THR A 496 LYS A 529 1 34 HELIX 11 11 SER A 537 ALA A 546 1 10 HELIX 12 12 THR B 311 ALA B 322 1 12 HELIX 13 13 SER B 338 LYS B 362 1 25 HELIX 14 14 THR B 371 SER B 395 1 25 HELIX 15 15 MET B 396 HIS B 398 5 3 HELIX 16 16 ASN B 413 VAL B 418 5 6 HELIX 17 17 GLY B 420 ASN B 439 1 20 HELIX 18 18 GLN B 441 SER B 456 1 16 HELIX 19 19 GLU B 471 ALA B 493 1 23 HELIX 20 20 THR B 496 ASN B 532 1 37 HELIX 21 21 SER B 537 ALA B 546 1 10 HELIX 22 22 ILE C 689 LEU C 694 1 6 HELIX 23 23 ILE D 689 ASP D 696 1 8 SHEET 1 A 2 LYS A 401 ALA A 405 0 SHEET 2 A 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402 SHEET 1 B 2 LYS B 401 ALA B 405 0 SHEET 2 B 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 SITE 1 AC1 12 MET A 343 LEU A 346 LEU A 349 GLU A 353 SITE 2 AC1 12 LEU A 387 MET A 388 LEU A 391 ARG A 394 SITE 3 AC1 12 MET A 421 ILE A 424 HIS A 524 LEU A 525 SITE 1 AC2 10 MET B 343 LEU B 349 GLU B 353 LEU B 387 SITE 2 AC2 10 MET B 388 LEU B 391 MET B 421 ILE B 424 SITE 3 AC2 10 HIS B 524 LEU B 525 CRYST1 54.190 81.930 58.470 90.00 110.86 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018454 0.000000 0.007032 0.00000 SCALE2 0.000000 0.012206 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018302 0.00000