data_4PQT # _entry.id 4PQT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PQT pdb_00004pqt 10.2210/pdb4pqt/pdb RCSB RCSB085107 ? ? WWPDB D_1000085107 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ZNV 'AMSH-LP E292A bound to Lys63-linked ubiquitin dimer' unspecified PDB 4K1R 'Crystal structure of Schizosaccharomyces pombe Sst2 catalytic domain and Ubiquitin' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4PQT _pdbx_database_status.recvd_initial_deposition_date 2014-03-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shrestha, R.K.' 1 'Ronau, J.A.' 2 'Das, C.' 3 # _citation.id primary _citation.title ;Insights into the Mechanism of Deubiquitination by JAMM Deubiquitinases from Cocrystal Structures of the Enzyme with the Substrate and Product. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 53 _citation.page_first 3199 _citation.page_last 3217 _citation.year 2014 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24787148 _citation.pdbx_database_id_DOI 10.1021/bi5003162 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shrestha, R.K.' 1 ? primary 'Ronau, J.A.' 2 ? primary 'Davies, C.W.' 3 ? primary 'Guenette, R.G.' 4 ? primary 'Strieter, E.R.' 5 ? primary 'Paul, L.N.' 6 ? primary 'Das, C.' 7 ? # _cell.entry_id 4PQT _cell.length_a 42.413 _cell.length_b 58.003 _cell.length_c 56.189 _cell.angle_alpha 90.00 _cell.angle_beta 108.97 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4PQT _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AMSH-like protease sst2' 21937.723 1 3.4.19.- D354A 'Catalytic domain unp residues 245-435' ? 2 polymer man 'Protein UBBP4' 8988.284 1 ? ? 'unp residues 77-152' ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 5 water nat water 18.015 78 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Suppressor of ste12 deletion protein 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSMAGTFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCG TTDEASLFEFQDKHNLLTLGWIHTHPTQTCFMSSVALHTHCSYQLMLPEAIAIVMAPSKNTSGIFRLLDPEGLQTIVKCR KPGLFHPHEGKVYTMVAQPGHVREINSKLQVVDLRVK ; ;GPLGSMAGTFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCG TTDEASLFEFQDKHNLLTLGWIHTHPTQTCFMSSVALHTHCSYQLMLPEAIAIVMAPSKNTSGIFRLLDPEGLQTIVKCR KPGLFHPHEGKVYTMVAQPGHVREINSKLQVVDLRVK ; A ? 2 'polypeptide(L)' no no ;GPLGSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG G ; ;GPLGSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG G ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 MET n 1 7 ALA n 1 8 GLY n 1 9 THR n 1 10 PHE n 1 11 LYS n 1 12 ILE n 1 13 HIS n 1 14 ALA n 1 15 TYR n 1 16 THR n 1 17 GLU n 1 18 GLY n 1 19 GLY n 1 20 LYS n 1 21 PRO n 1 22 LEU n 1 23 ARG n 1 24 THR n 1 25 ILE n 1 26 TYR n 1 27 LEU n 1 28 PRO n 1 29 LYS n 1 30 LEU n 1 31 LEU n 1 32 LYS n 1 33 LYS n 1 34 VAL n 1 35 PHE n 1 36 LEU n 1 37 ASP n 1 38 VAL n 1 39 VAL n 1 40 LYS n 1 41 PRO n 1 42 ASN n 1 43 THR n 1 44 LYS n 1 45 LYS n 1 46 ASN n 1 47 LEU n 1 48 GLU n 1 49 THR n 1 50 CYS n 1 51 GLY n 1 52 ILE n 1 53 LEU n 1 54 CYS n 1 55 GLY n 1 56 LYS n 1 57 LEU n 1 58 ARG n 1 59 GLN n 1 60 ASN n 1 61 ALA n 1 62 PHE n 1 63 PHE n 1 64 ILE n 1 65 THR n 1 66 HIS n 1 67 LEU n 1 68 VAL n 1 69 ILE n 1 70 PRO n 1 71 LEU n 1 72 GLN n 1 73 GLU n 1 74 ALA n 1 75 THR n 1 76 SER n 1 77 ASP n 1 78 THR n 1 79 CYS n 1 80 GLY n 1 81 THR n 1 82 THR n 1 83 ASP n 1 84 GLU n 1 85 ALA n 1 86 SER n 1 87 LEU n 1 88 PHE n 1 89 GLU n 1 90 PHE n 1 91 GLN n 1 92 ASP n 1 93 LYS n 1 94 HIS n 1 95 ASN n 1 96 LEU n 1 97 LEU n 1 98 THR n 1 99 LEU n 1 100 GLY n 1 101 TRP n 1 102 ILE n 1 103 HIS n 1 104 THR n 1 105 HIS n 1 106 PRO n 1 107 THR n 1 108 GLN n 1 109 THR n 1 110 CYS n 1 111 PHE n 1 112 MET n 1 113 SER n 1 114 SER n 1 115 VAL n 1 116 ALA n 1 117 LEU n 1 118 HIS n 1 119 THR n 1 120 HIS n 1 121 CYS n 1 122 SER n 1 123 TYR n 1 124 GLN n 1 125 LEU n 1 126 MET n 1 127 LEU n 1 128 PRO n 1 129 GLU n 1 130 ALA n 1 131 ILE n 1 132 ALA n 1 133 ILE n 1 134 VAL n 1 135 MET n 1 136 ALA n 1 137 PRO n 1 138 SER n 1 139 LYS n 1 140 ASN n 1 141 THR n 1 142 SER n 1 143 GLY n 1 144 ILE n 1 145 PHE n 1 146 ARG n 1 147 LEU n 1 148 LEU n 1 149 ASP n 1 150 PRO n 1 151 GLU n 1 152 GLY n 1 153 LEU n 1 154 GLN n 1 155 THR n 1 156 ILE n 1 157 VAL n 1 158 LYS n 1 159 CYS n 1 160 ARG n 1 161 LYS n 1 162 PRO n 1 163 GLY n 1 164 LEU n 1 165 PHE n 1 166 HIS n 1 167 PRO n 1 168 HIS n 1 169 GLU n 1 170 GLY n 1 171 LYS n 1 172 VAL n 1 173 TYR n 1 174 THR n 1 175 MET n 1 176 VAL n 1 177 ALA n 1 178 GLN n 1 179 PRO n 1 180 GLY n 1 181 HIS n 1 182 VAL n 1 183 ARG n 1 184 GLU n 1 185 ILE n 1 186 ASN n 1 187 SER n 1 188 LYS n 1 189 LEU n 1 190 GLN n 1 191 VAL n 1 192 VAL n 1 193 ASP n 1 194 LEU n 1 195 ARG n 1 196 VAL n 1 197 LYS n 2 1 GLY n 2 2 PRO n 2 3 LEU n 2 4 GLY n 2 5 SER n 2 6 MET n 2 7 GLN n 2 8 ILE n 2 9 PHE n 2 10 VAL n 2 11 LYS n 2 12 THR n 2 13 LEU n 2 14 THR n 2 15 GLY n 2 16 LYS n 2 17 THR n 2 18 ILE n 2 19 THR n 2 20 LEU n 2 21 GLU n 2 22 VAL n 2 23 GLU n 2 24 PRO n 2 25 SER n 2 26 ASP n 2 27 THR n 2 28 ILE n 2 29 GLU n 2 30 ASN n 2 31 VAL n 2 32 LYS n 2 33 ALA n 2 34 LYS n 2 35 ILE n 2 36 GLN n 2 37 ASP n 2 38 LYS n 2 39 GLU n 2 40 GLY n 2 41 ILE n 2 42 PRO n 2 43 PRO n 2 44 ASP n 2 45 GLN n 2 46 GLN n 2 47 ARG n 2 48 LEU n 2 49 ILE n 2 50 PHE n 2 51 ALA n 2 52 GLY n 2 53 LYS n 2 54 GLN n 2 55 LEU n 2 56 GLU n 2 57 ASP n 2 58 GLY n 2 59 ARG n 2 60 THR n 2 61 LEU n 2 62 SER n 2 63 ASP n 2 64 TYR n 2 65 ASN n 2 66 ILE n 2 67 GLN n 2 68 LYS n 2 69 GLU n 2 70 SER n 2 71 THR n 2 72 LEU n 2 73 HIS n 2 74 LEU n 2 75 VAL n 2 76 LEU n 2 77 ARG n 2 78 LEU n 2 79 ARG n 2 80 GLY n 2 81 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'Fission yeast' ? 'SPAC19B12.10, sst2' ? '972 / ATCC 24843' ? ? ? ? 'Schizosaccharomyces pombe' 284812 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? Rosetta ? ? ? ? ? ? ? plasmid ? ? ? pGEX-6-P1 ? ? 2 1 sample ? ? ? human ? 'UBBP4, Ubiquitin' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? Rosetta ? ? ? ? ? ? ? plasmid ? ? ? pET26b ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SST2_SCHPO Q9P371 1 ;AGTFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEAS LFEFQDKHNLLTLGWIHTHPTQTCFMSSVDLHTHCSYQLMLPEAIAIVMAPSKNTSGIFRLLDPEGLQTIVKCRKPGLFH PHEGKVYTMVAQPGHVREINSKLQVVDLRVK ; 245 ? 2 UNP J3QRK5_HUMAN J3QRK5 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGG 77 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4PQT A 7 ? 197 ? Q9P371 245 ? 435 ? 245 435 2 2 4PQT B 6 ? 81 ? J3QRK5 77 ? 152 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4PQT GLY A 1 ? UNP Q9P371 ? ? 'expression tag' 239 1 1 4PQT PRO A 2 ? UNP Q9P371 ? ? 'expression tag' 240 2 1 4PQT LEU A 3 ? UNP Q9P371 ? ? 'expression tag' 241 3 1 4PQT GLY A 4 ? UNP Q9P371 ? ? 'expression tag' 242 4 1 4PQT SER A 5 ? UNP Q9P371 ? ? 'expression tag' 243 5 1 4PQT MET A 6 ? UNP Q9P371 ? ? 'expression tag' 244 6 1 4PQT ALA A 116 ? UNP Q9P371 ASP 354 'engineered mutation' 354 7 2 4PQT GLY B 1 ? UNP J3QRK5 ? ? 'expression tag' -4 8 2 4PQT PRO B 2 ? UNP J3QRK5 ? ? 'expression tag' -3 9 2 4PQT LEU B 3 ? UNP J3QRK5 ? ? 'expression tag' -2 10 2 4PQT GLY B 4 ? UNP J3QRK5 ? ? 'expression tag' -1 11 2 4PQT SER B 5 ? UNP J3QRK5 ? ? 'expression tag' 0 12 2 4PQT THR B 60 ? UNP J3QRK5 SER 131 conflict 55 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4PQT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details '1% w/v Tryptone, 0.05M HEPES sodium, 20% PEG 3,350, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2013-11-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 Channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.033 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.033 # _reflns.entry_id 4PQT _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 60.0 _reflns.d_resolution_high 2.05 _reflns.number_obs 16438 _reflns.number_all 16438 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_Rsym_value 0.086 _reflns.pdbx_netI_over_sigmaI 16.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.05 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.625 _reflns_shell.pdbx_Rsym_value 0.625 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4PQT _refine.ls_number_reflns_obs 16420 _refine.ls_number_reflns_all 16585 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.109 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 99.68 _refine.ls_R_factor_obs 0.2045 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2019 _refine.ls_R_factor_R_free 0.2525 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.07 _refine.ls_number_reflns_R_free 832 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB Entry 4K1R' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.30 _refine.pdbx_overall_phase_error 27.59 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2042 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 78 _refine_hist.number_atoms_total 2133 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 40.109 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.008 ? ? 2090 ? 'X-RAY DIFFRACTION' f_angle_d 1.213 ? ? 2824 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.090 ? ? 782 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.045 ? ? 333 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 358 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.0440 2.1721 2547 0.2857 98.00 0.3281 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.1721 2.3398 2605 0.2575 100.00 0.2855 . . 127 . . . . 'X-RAY DIFFRACTION' . 2.3398 2.5752 2592 0.2506 100.00 0.2946 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.5752 2.9477 2607 0.2389 100.00 0.3364 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.9477 3.7134 2599 0.1956 100.00 0.2691 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.7134 40.1165 2638 0.1476 100.00 0.1815 . . 159 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4PQT _struct.title ;Insights into the mechanism of deubiquitination by JAMM deubiquitinases from co-crystal structures of enzyme with substrate and product ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PQT _struct_keywords.pdbx_keywords Hydrolase/transcription _struct_keywords.text ;helix-beta-helix sandwich, ubiquitin, deubiquitination, Zinc metalloprotease, Lysine 63-linked polyubiquitin, Hydrolase-transcription complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 29 ? LYS A 45 ? LYS A 267 LYS A 283 1 ? 17 HELX_P HELX_P2 2 ASP A 83 ? HIS A 94 ? ASP A 321 HIS A 332 1 ? 12 HELX_P HELX_P3 3 SER A 113 ? LEU A 127 ? SER A 351 LEU A 365 1 ? 15 HELX_P HELX_P4 4 PRO A 150 ? CYS A 159 ? PRO A 388 CYS A 397 1 ? 10 HELX_P HELX_P5 5 THR B 27 ? GLY B 40 ? THR B 22 GLY B 35 1 ? 14 HELX_P HELX_P6 6 PRO B 42 ? ASP B 44 ? PRO B 37 ASP B 39 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 118 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 356 A ZN 501 1_555 ? ? ? ? ? ? ? 2.130 ? ? metalc2 metalc ? ? A CYS 159 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 397 A ZN 501 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc3 metalc ? ? A HIS 166 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 404 A ZN 501 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc4 metalc ? ? A HIS 168 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 406 A ZN 501 1_555 ? ? ? ? ? ? ? 1.842 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 149 A . ? ASP 387 A PRO 150 A ? PRO 388 A 1 13.28 2 GLN 178 A . ? GLN 416 A PRO 179 A ? PRO 417 A 1 2.90 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 8 ? C ? 7 ? D ? 3 ? E ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? parallel B 7 8 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 14 ? TYR A 15 ? ALA A 252 TYR A 253 A 2 PRO A 21 ? LEU A 22 ? PRO A 259 LEU A 260 B 1 TYR A 173 ? MET A 175 ? TYR A 411 MET A 413 B 2 THR A 141 ? LEU A 147 ? THR A 379 LEU A 385 B 3 ILE A 131 ? ALA A 136 ? ILE A 369 ALA A 374 B 4 LEU A 97 ? THR A 104 ? LEU A 335 THR A 342 B 5 CYS A 50 ? ARG A 58 ? CYS A 288 ARG A 296 B 6 ALA A 61 ? ILE A 69 ? ALA A 299 ILE A 307 B 7 THR A 24 ? PRO A 28 ? THR A 262 PRO A 266 B 8 VAL A 182 ? ILE A 185 ? VAL A 420 ILE A 423 C 1 TYR A 173 ? MET A 175 ? TYR A 411 MET A 413 C 2 THR A 141 ? LEU A 147 ? THR A 379 LEU A 385 C 3 ILE A 131 ? ALA A 136 ? ILE A 369 ALA A 374 C 4 LEU A 97 ? THR A 104 ? LEU A 335 THR A 342 C 5 CYS A 50 ? ARG A 58 ? CYS A 288 ARG A 296 C 6 ALA A 61 ? ILE A 69 ? ALA A 299 ILE A 307 C 7 GLN A 190 ? ASP A 193 ? GLN A 428 ASP A 431 D 1 GLN A 72 ? ALA A 74 ? GLN A 310 ALA A 312 D 2 CYS A 79 ? THR A 81 ? CYS A 317 THR A 319 D 3 ARG B 79 ? GLY B 80 ? ARG B 74 GLY B 75 E 1 THR B 17 ? GLU B 21 ? THR B 12 GLU B 16 E 2 GLN B 7 ? LYS B 11 ? GLN B 2 LYS B 6 E 3 THR B 71 ? LEU B 76 ? THR B 66 LEU B 71 E 4 GLN B 46 ? PHE B 50 ? GLN B 41 PHE B 45 E 5 LYS B 53 ? GLN B 54 ? LYS B 48 GLN B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 14 ? N ALA A 252 O LEU A 22 ? O LEU A 260 B 1 2 O THR A 174 ? O THR A 412 N ARG A 146 ? N ARG A 384 B 2 3 O PHE A 145 ? O PHE A 383 N ALA A 132 ? N ALA A 370 B 3 4 O ILE A 133 ? O ILE A 371 N TRP A 101 ? N TRP A 339 B 4 5 O LEU A 99 ? O LEU A 337 N LEU A 53 ? N LEU A 291 B 5 6 N ILE A 52 ? N ILE A 290 O VAL A 68 ? O VAL A 306 B 6 7 O PHE A 62 ? O PHE A 300 N TYR A 26 ? N TYR A 264 B 7 8 N LEU A 27 ? N LEU A 265 O ILE A 185 ? O ILE A 423 C 1 2 O THR A 174 ? O THR A 412 N ARG A 146 ? N ARG A 384 C 2 3 O PHE A 145 ? O PHE A 383 N ALA A 132 ? N ALA A 370 C 3 4 O ILE A 133 ? O ILE A 371 N TRP A 101 ? N TRP A 339 C 4 5 O LEU A 99 ? O LEU A 337 N LEU A 53 ? N LEU A 291 C 5 6 N ILE A 52 ? N ILE A 290 O VAL A 68 ? O VAL A 306 C 6 7 N ILE A 69 ? N ILE A 307 O VAL A 192 ? O VAL A 430 D 1 2 N GLU A 73 ? N GLU A 311 O GLY A 80 ? O GLY A 318 D 2 3 N CYS A 79 ? N CYS A 317 O GLY B 80 ? O GLY B 75 E 1 2 O ILE B 18 ? O ILE B 13 N VAL B 10 ? N VAL B 5 E 2 3 N PHE B 9 ? N PHE B 4 O LEU B 72 ? O LEU B 67 E 3 4 O HIS B 73 ? O HIS B 68 N ILE B 49 ? N ILE B 44 E 4 5 N PHE B 50 ? N PHE B 45 O LYS B 53 ? O LYS B 48 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'BINDING SITE FOR RESIDUE ZN A 501' AC2 Software A EDO 503 ? 4 'BINDING SITE FOR RESIDUE EDO A 503' AC3 Software B EDO 101 ? 7 'BINDING SITE FOR RESIDUE EDO B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 118 ? HIS A 356 . ? 1_555 ? 2 AC1 4 CYS A 159 ? CYS A 397 . ? 1_555 ? 3 AC1 4 HIS A 166 ? HIS A 404 . ? 1_555 ? 4 AC1 4 HIS A 168 ? HIS A 406 . ? 1_555 ? 5 AC2 4 GLN A 178 ? GLN A 416 . ? 1_555 ? 6 AC2 4 PRO A 179 ? PRO A 417 . ? 1_555 ? 7 AC2 4 GLY A 180 ? GLY A 418 . ? 1_555 ? 8 AC2 4 HOH G . ? HOH A 608 . ? 1_555 ? 9 AC3 7 HOH G . ? HOH A 612 . ? 1_555 ? 10 AC3 7 THR B 12 ? THR B 7 . ? 1_555 ? 11 AC3 7 LEU B 13 ? LEU B 8 . ? 1_555 ? 12 AC3 7 LEU B 74 ? LEU B 69 . ? 1_555 ? 13 AC3 7 VAL B 75 ? VAL B 70 . ? 1_555 ? 14 AC3 7 LEU B 76 ? LEU B 71 . ? 1_555 ? 15 AC3 7 HOH H . ? HOH B 207 . ? 1_555 ? # _database_PDB_matrix.entry_id 4PQT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4PQT _atom_sites.fract_transf_matrix[1][1] 0.023578 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008106 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017240 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018820 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 239 ? ? ? A . n A 1 2 PRO 2 240 ? ? ? A . n A 1 3 LEU 3 241 ? ? ? A . n A 1 4 GLY 4 242 ? ? ? A . n A 1 5 SER 5 243 ? ? ? A . n A 1 6 MET 6 244 ? ? ? A . n A 1 7 ALA 7 245 ? ? ? A . n A 1 8 GLY 8 246 ? ? ? A . n A 1 9 THR 9 247 ? ? ? A . n A 1 10 PHE 10 248 ? ? ? A . n A 1 11 LYS 11 249 249 LYS LYS A . n A 1 12 ILE 12 250 250 ILE ILE A . n A 1 13 HIS 13 251 251 HIS HIS A . n A 1 14 ALA 14 252 252 ALA ALA A . n A 1 15 TYR 15 253 253 TYR TYR A . n A 1 16 THR 16 254 254 THR THR A . n A 1 17 GLU 17 255 255 GLU GLU A . n A 1 18 GLY 18 256 256 GLY GLY A . n A 1 19 GLY 19 257 257 GLY GLY A . n A 1 20 LYS 20 258 258 LYS LYS A . n A 1 21 PRO 21 259 259 PRO PRO A . n A 1 22 LEU 22 260 260 LEU LEU A . n A 1 23 ARG 23 261 261 ARG ARG A . n A 1 24 THR 24 262 262 THR THR A . n A 1 25 ILE 25 263 263 ILE ILE A . n A 1 26 TYR 26 264 264 TYR TYR A . n A 1 27 LEU 27 265 265 LEU LEU A . n A 1 28 PRO 28 266 266 PRO PRO A . n A 1 29 LYS 29 267 267 LYS LYS A . n A 1 30 LEU 30 268 268 LEU ALA A . n A 1 31 LEU 31 269 269 LEU LEU A . n A 1 32 LYS 32 270 270 LYS LYS A . n A 1 33 LYS 33 271 271 LYS LYS A . n A 1 34 VAL 34 272 272 VAL VAL A . n A 1 35 PHE 35 273 273 PHE PHE A . n A 1 36 LEU 36 274 274 LEU LEU A . n A 1 37 ASP 37 275 275 ASP ASP A . n A 1 38 VAL 38 276 276 VAL VAL A . n A 1 39 VAL 39 277 277 VAL VAL A . n A 1 40 LYS 40 278 278 LYS ALA A . n A 1 41 PRO 41 279 279 PRO PRO A . n A 1 42 ASN 42 280 280 ASN ASN A . n A 1 43 THR 43 281 281 THR THR A . n A 1 44 LYS 44 282 282 LYS ALA A . n A 1 45 LYS 45 283 283 LYS ALA A . n A 1 46 ASN 46 284 284 ASN ASN A . n A 1 47 LEU 47 285 285 LEU LEU A . n A 1 48 GLU 48 286 286 GLU GLU A . n A 1 49 THR 49 287 287 THR THR A . n A 1 50 CYS 50 288 288 CYS CYS A . n A 1 51 GLY 51 289 289 GLY GLY A . n A 1 52 ILE 52 290 290 ILE ILE A . n A 1 53 LEU 53 291 291 LEU LEU A . n A 1 54 CYS 54 292 292 CYS CYS A . n A 1 55 GLY 55 293 293 GLY GLY A . n A 1 56 LYS 56 294 294 LYS LYS A . n A 1 57 LEU 57 295 295 LEU LEU A . n A 1 58 ARG 58 296 296 ARG ARG A . n A 1 59 GLN 59 297 297 GLN GLN A . n A 1 60 ASN 60 298 298 ASN ASN A . n A 1 61 ALA 61 299 299 ALA ALA A . n A 1 62 PHE 62 300 300 PHE PHE A . n A 1 63 PHE 63 301 301 PHE PHE A . n A 1 64 ILE 64 302 302 ILE ILE A . n A 1 65 THR 65 303 303 THR THR A . n A 1 66 HIS 66 304 304 HIS HIS A . n A 1 67 LEU 67 305 305 LEU LEU A . n A 1 68 VAL 68 306 306 VAL VAL A . n A 1 69 ILE 69 307 307 ILE ILE A . n A 1 70 PRO 70 308 308 PRO PRO A . n A 1 71 LEU 71 309 309 LEU LEU A . n A 1 72 GLN 72 310 310 GLN GLN A . n A 1 73 GLU 73 311 311 GLU GLU A . n A 1 74 ALA 74 312 312 ALA ALA A . n A 1 75 THR 75 313 313 THR THR A . n A 1 76 SER 76 314 314 SER SER A . n A 1 77 ASP 77 315 315 ASP ASP A . n A 1 78 THR 78 316 316 THR THR A . n A 1 79 CYS 79 317 317 CYS CYS A . n A 1 80 GLY 80 318 318 GLY GLY A . n A 1 81 THR 81 319 319 THR THR A . n A 1 82 THR 82 320 320 THR THR A . n A 1 83 ASP 83 321 321 ASP ASP A . n A 1 84 GLU 84 322 322 GLU GLU A . n A 1 85 ALA 85 323 323 ALA ALA A . n A 1 86 SER 86 324 324 SER SER A . n A 1 87 LEU 87 325 325 LEU LEU A . n A 1 88 PHE 88 326 326 PHE PHE A . n A 1 89 GLU 89 327 327 GLU GLU A . n A 1 90 PHE 90 328 328 PHE PHE A . n A 1 91 GLN 91 329 329 GLN GLN A . n A 1 92 ASP 92 330 330 ASP ASP A . n A 1 93 LYS 93 331 331 LYS LYS A . n A 1 94 HIS 94 332 332 HIS HIS A . n A 1 95 ASN 95 333 333 ASN ASN A . n A 1 96 LEU 96 334 334 LEU LEU A . n A 1 97 LEU 97 335 335 LEU LEU A . n A 1 98 THR 98 336 336 THR THR A . n A 1 99 LEU 99 337 337 LEU LEU A . n A 1 100 GLY 100 338 338 GLY GLY A . n A 1 101 TRP 101 339 339 TRP TRP A . n A 1 102 ILE 102 340 340 ILE ILE A . n A 1 103 HIS 103 341 341 HIS HIS A . n A 1 104 THR 104 342 342 THR THR A . n A 1 105 HIS 105 343 343 HIS HIS A . n A 1 106 PRO 106 344 344 PRO PRO A . n A 1 107 THR 107 345 345 THR THR A . n A 1 108 GLN 108 346 346 GLN GLN A . n A 1 109 THR 109 347 347 THR THR A . n A 1 110 CYS 110 348 348 CYS CYS A . n A 1 111 PHE 111 349 349 PHE PHE A . n A 1 112 MET 112 350 350 MET MET A . n A 1 113 SER 113 351 351 SER SER A . n A 1 114 SER 114 352 352 SER SER A . n A 1 115 VAL 115 353 353 VAL VAL A . n A 1 116 ALA 116 354 354 ALA ALA A . n A 1 117 LEU 117 355 355 LEU LEU A . n A 1 118 HIS 118 356 356 HIS HIS A . n A 1 119 THR 119 357 357 THR THR A . n A 1 120 HIS 120 358 358 HIS HIS A . n A 1 121 CYS 121 359 359 CYS CYS A . n A 1 122 SER 122 360 360 SER SER A . n A 1 123 TYR 123 361 361 TYR TYR A . n A 1 124 GLN 124 362 362 GLN GLN A . n A 1 125 LEU 125 363 363 LEU LEU A . n A 1 126 MET 126 364 364 MET MET A . n A 1 127 LEU 127 365 365 LEU LEU A . n A 1 128 PRO 128 366 366 PRO PRO A . n A 1 129 GLU 129 367 367 GLU GLU A . n A 1 130 ALA 130 368 368 ALA ALA A . n A 1 131 ILE 131 369 369 ILE ILE A . n A 1 132 ALA 132 370 370 ALA ALA A . n A 1 133 ILE 133 371 371 ILE ILE A . n A 1 134 VAL 134 372 372 VAL VAL A . n A 1 135 MET 135 373 373 MET MET A . n A 1 136 ALA 136 374 374 ALA ALA A . n A 1 137 PRO 137 375 375 PRO PRO A . n A 1 138 SER 138 376 376 SER SER A . n A 1 139 LYS 139 377 377 LYS LYS A . n A 1 140 ASN 140 378 378 ASN ASN A . n A 1 141 THR 141 379 379 THR THR A . n A 1 142 SER 142 380 380 SER SER A . n A 1 143 GLY 143 381 381 GLY GLY A . n A 1 144 ILE 144 382 382 ILE ILE A . n A 1 145 PHE 145 383 383 PHE PHE A . n A 1 146 ARG 146 384 384 ARG ARG A . n A 1 147 LEU 147 385 385 LEU LEU A . n A 1 148 LEU 148 386 386 LEU LEU A . n A 1 149 ASP 149 387 387 ASP ASP A . n A 1 150 PRO 150 388 388 PRO PRO A . n A 1 151 GLU 151 389 389 GLU GLU A . n A 1 152 GLY 152 390 390 GLY GLY A . n A 1 153 LEU 153 391 391 LEU LEU A . n A 1 154 GLN 154 392 392 GLN GLN A . n A 1 155 THR 155 393 393 THR THR A . n A 1 156 ILE 156 394 394 ILE ILE A . n A 1 157 VAL 157 395 395 VAL VAL A . n A 1 158 LYS 158 396 396 LYS LYS A . n A 1 159 CYS 159 397 397 CYS CYS A . n A 1 160 ARG 160 398 398 ARG ARG A . n A 1 161 LYS 161 399 399 LYS LYS A . n A 1 162 PRO 162 400 400 PRO PRO A . n A 1 163 GLY 163 401 401 GLY GLY A . n A 1 164 LEU 164 402 402 LEU LEU A . n A 1 165 PHE 165 403 403 PHE PHE A . n A 1 166 HIS 166 404 404 HIS HIS A . n A 1 167 PRO 167 405 405 PRO PRO A . n A 1 168 HIS 168 406 406 HIS HIS A . n A 1 169 GLU 169 407 407 GLU GLU A . n A 1 170 GLY 170 408 408 GLY GLY A . n A 1 171 LYS 171 409 409 LYS LYS A . n A 1 172 VAL 172 410 410 VAL VAL A . n A 1 173 TYR 173 411 411 TYR TYR A . n A 1 174 THR 174 412 412 THR THR A . n A 1 175 MET 175 413 413 MET MET A . n A 1 176 VAL 176 414 414 VAL VAL A . n A 1 177 ALA 177 415 415 ALA ALA A . n A 1 178 GLN 178 416 416 GLN GLN A . n A 1 179 PRO 179 417 417 PRO ALA A . n A 1 180 GLY 180 418 418 GLY GLY A . n A 1 181 HIS 181 419 419 HIS HIS A . n A 1 182 VAL 182 420 420 VAL VAL A . n A 1 183 ARG 183 421 421 ARG ARG A . n A 1 184 GLU 184 422 422 GLU GLU A . n A 1 185 ILE 185 423 423 ILE ILE A . n A 1 186 ASN 186 424 424 ASN ASN A . n A 1 187 SER 187 425 425 SER SER A . n A 1 188 LYS 188 426 426 LYS LYS A . n A 1 189 LEU 189 427 427 LEU LEU A . n A 1 190 GLN 190 428 428 GLN GLN A . n A 1 191 VAL 191 429 429 VAL VAL A . n A 1 192 VAL 192 430 430 VAL VAL A . n A 1 193 ASP 193 431 431 ASP ASP A . n A 1 194 LEU 194 432 432 LEU LEU A . n A 1 195 ARG 195 433 433 ARG ARG A . n A 1 196 VAL 196 434 ? ? ? A . n A 1 197 LYS 197 435 ? ? ? A . n B 2 1 GLY 1 -4 ? ? ? B . n B 2 2 PRO 2 -3 ? ? ? B . n B 2 3 LEU 3 -2 ? ? ? B . n B 2 4 GLY 4 -1 ? ? ? B . n B 2 5 SER 5 0 ? ? ? B . n B 2 6 MET 6 1 1 MET MET B . n B 2 7 GLN 7 2 2 GLN GLN B . n B 2 8 ILE 8 3 3 ILE ILE B . n B 2 9 PHE 9 4 4 PHE PHE B . n B 2 10 VAL 10 5 5 VAL VAL B . n B 2 11 LYS 11 6 6 LYS LYS B . n B 2 12 THR 12 7 7 THR THR B . n B 2 13 LEU 13 8 8 LEU LEU B . n B 2 14 THR 14 9 9 THR THR B . n B 2 15 GLY 15 10 10 GLY GLY B . n B 2 16 LYS 16 11 11 LYS LYS B . n B 2 17 THR 17 12 12 THR THR B . n B 2 18 ILE 18 13 13 ILE ILE B . n B 2 19 THR 19 14 14 THR THR B . n B 2 20 LEU 20 15 15 LEU LEU B . n B 2 21 GLU 21 16 16 GLU GLU B . n B 2 22 VAL 22 17 17 VAL VAL B . n B 2 23 GLU 23 18 18 GLU GLU B . n B 2 24 PRO 24 19 19 PRO PRO B . n B 2 25 SER 25 20 20 SER SER B . n B 2 26 ASP 26 21 21 ASP ASP B . n B 2 27 THR 27 22 22 THR THR B . n B 2 28 ILE 28 23 23 ILE ILE B . n B 2 29 GLU 29 24 24 GLU GLU B . n B 2 30 ASN 30 25 25 ASN ASN B . n B 2 31 VAL 31 26 26 VAL VAL B . n B 2 32 LYS 32 27 27 LYS LYS B . n B 2 33 ALA 33 28 28 ALA ALA B . n B 2 34 LYS 34 29 29 LYS LYS B . n B 2 35 ILE 35 30 30 ILE ILE B . n B 2 36 GLN 36 31 31 GLN GLN B . n B 2 37 ASP 37 32 32 ASP ASP B . n B 2 38 LYS 38 33 33 LYS LYS B . n B 2 39 GLU 39 34 34 GLU GLU B . n B 2 40 GLY 40 35 35 GLY GLY B . n B 2 41 ILE 41 36 36 ILE ILE B . n B 2 42 PRO 42 37 37 PRO PRO B . n B 2 43 PRO 43 38 38 PRO PRO B . n B 2 44 ASP 44 39 39 ASP ASP B . n B 2 45 GLN 45 40 40 GLN GLN B . n B 2 46 GLN 46 41 41 GLN GLN B . n B 2 47 ARG 47 42 42 ARG ARG B . n B 2 48 LEU 48 43 43 LEU LEU B . n B 2 49 ILE 49 44 44 ILE ILE B . n B 2 50 PHE 50 45 45 PHE PHE B . n B 2 51 ALA 51 46 46 ALA ALA B . n B 2 52 GLY 52 47 47 GLY GLY B . n B 2 53 LYS 53 48 48 LYS LYS B . n B 2 54 GLN 54 49 49 GLN GLN B . n B 2 55 LEU 55 50 50 LEU LEU B . n B 2 56 GLU 56 51 51 GLU GLU B . n B 2 57 ASP 57 52 52 ASP ASP B . n B 2 58 GLY 58 53 53 GLY GLY B . n B 2 59 ARG 59 54 54 ARG ARG B . n B 2 60 THR 60 55 55 THR THR B . n B 2 61 LEU 61 56 56 LEU LEU B . n B 2 62 SER 62 57 57 SER SER B . n B 2 63 ASP 63 58 58 ASP ASP B . n B 2 64 TYR 64 59 59 TYR TYR B . n B 2 65 ASN 65 60 60 ASN ASN B . n B 2 66 ILE 66 61 61 ILE ILE B . n B 2 67 GLN 67 62 62 GLN GLN B . n B 2 68 LYS 68 63 63 LYS LYS B . n B 2 69 GLU 69 64 64 GLU GLU B . n B 2 70 SER 70 65 65 SER SER B . n B 2 71 THR 71 66 66 THR THR B . n B 2 72 LEU 72 67 67 LEU LEU B . n B 2 73 HIS 73 68 68 HIS HIS B . n B 2 74 LEU 74 69 69 LEU LEU B . n B 2 75 VAL 75 70 70 VAL VAL B . n B 2 76 LEU 76 71 71 LEU LEU B . n B 2 77 ARG 77 72 72 ARG ARG B . n B 2 78 LEU 78 73 73 LEU LEU B . n B 2 79 ARG 79 74 74 ARG ARG B . n B 2 80 GLY 80 75 75 GLY GLY B . n B 2 81 GLY 81 76 76 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 501 1 ZN ZN A . D 4 EDO 1 502 2 EDO EDO A . E 4 EDO 1 503 3 EDO EDO A . F 4 EDO 1 101 1 EDO EDO B . G 5 HOH 1 601 1 HOH HOH A . G 5 HOH 2 602 3 HOH HOH A . G 5 HOH 3 603 4 HOH HOH A . G 5 HOH 4 604 6 HOH HOH A . G 5 HOH 5 605 7 HOH HOH A . G 5 HOH 6 606 10 HOH HOH A . G 5 HOH 7 607 13 HOH HOH A . G 5 HOH 8 608 15 HOH HOH A . G 5 HOH 9 609 16 HOH HOH A . G 5 HOH 10 610 18 HOH HOH A . G 5 HOH 11 611 26 HOH HOH A . G 5 HOH 12 612 28 HOH HOH A . G 5 HOH 13 613 30 HOH HOH A . G 5 HOH 14 614 38 HOH HOH A . G 5 HOH 15 615 42 HOH HOH A . G 5 HOH 16 616 47 HOH HOH A . G 5 HOH 17 617 57 HOH HOH A . G 5 HOH 18 618 61 HOH HOH A . G 5 HOH 19 619 62 HOH HOH A . G 5 HOH 20 620 66 HOH HOH A . G 5 HOH 21 621 67 HOH HOH A . G 5 HOH 22 622 69 HOH HOH A . G 5 HOH 23 623 85 HOH HOH A . G 5 HOH 24 624 100 HOH HOH A . G 5 HOH 25 625 102 HOH HOH A . G 5 HOH 26 626 105 HOH HOH A . G 5 HOH 27 627 117 HOH HOH A . G 5 HOH 28 628 118 HOH HOH A . G 5 HOH 29 629 121 HOH HOH A . G 5 HOH 30 630 142 HOH HOH A . G 5 HOH 31 631 157 HOH HOH A . G 5 HOH 32 632 158 HOH HOH A . G 5 HOH 33 633 159 HOH HOH A . G 5 HOH 34 634 161 HOH HOH A . G 5 HOH 35 635 165 HOH HOH A . G 5 HOH 36 636 167 HOH HOH A . G 5 HOH 37 637 170 HOH HOH A . G 5 HOH 38 638 171 HOH HOH A . G 5 HOH 39 639 173 HOH HOH A . G 5 HOH 40 640 177 HOH HOH A . G 5 HOH 41 641 178 HOH HOH A . G 5 HOH 42 642 180 HOH HOH A . G 5 HOH 43 643 181 HOH HOH A . G 5 HOH 44 644 188 HOH HOH A . H 5 HOH 1 201 2 HOH HOH B . H 5 HOH 2 202 5 HOH HOH B . H 5 HOH 3 203 9 HOH HOH B . H 5 HOH 4 204 11 HOH HOH B . H 5 HOH 5 205 14 HOH HOH B . H 5 HOH 6 206 17 HOH HOH B . H 5 HOH 7 207 21 HOH HOH B . H 5 HOH 8 208 22 HOH HOH B . H 5 HOH 9 209 23 HOH HOH B . H 5 HOH 10 210 29 HOH HOH B . H 5 HOH 11 211 31 HOH HOH B . H 5 HOH 12 212 34 HOH HOH B . H 5 HOH 13 213 46 HOH HOH B . H 5 HOH 14 214 51 HOH HOH B . H 5 HOH 15 215 53 HOH HOH B . H 5 HOH 16 216 60 HOH HOH B . H 5 HOH 17 217 63 HOH HOH B . H 5 HOH 18 218 64 HOH HOH B . H 5 HOH 19 219 65 HOH HOH B . H 5 HOH 20 220 81 HOH HOH B . H 5 HOH 21 221 84 HOH HOH B . H 5 HOH 22 222 88 HOH HOH B . H 5 HOH 23 223 93 HOH HOH B . H 5 HOH 24 224 107 HOH HOH B . H 5 HOH 25 225 168 HOH HOH B . H 5 HOH 26 226 169 HOH HOH B . H 5 HOH 27 227 176 HOH HOH B . H 5 HOH 28 228 182 HOH HOH B . H 5 HOH 29 229 183 HOH HOH B . H 5 HOH 30 230 184 HOH HOH B . H 5 HOH 31 231 185 HOH HOH B . H 5 HOH 32 232 186 HOH HOH B . H 5 HOH 33 233 187 HOH HOH B . H 5 HOH 34 234 189 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,G 2 1 B,F,H 3 1 A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 2930 ? 3 MORE -11 ? 3 'SSA (A^2)' 11940 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 118 ? A HIS 356 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? A CYS 159 ? A CYS 397 ? 1_555 108.5 ? 2 NE2 ? A HIS 118 ? A HIS 356 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 166 ? A HIS 404 ? 1_555 112.8 ? 3 SG ? A CYS 159 ? A CYS 397 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 166 ? A HIS 404 ? 1_555 115.1 ? 4 NE2 ? A HIS 118 ? A HIS 356 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 168 ? A HIS 406 ? 1_555 111.9 ? 5 SG ? A CYS 159 ? A CYS 397 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 168 ? A HIS 406 ? 1_555 106.9 ? 6 NE2 ? A HIS 166 ? A HIS 404 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 168 ? A HIS 406 ? 1_555 101.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-18 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.value' 14 2 'Structure model' '_struct_conn.pdbx_dist_value' 15 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 19 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 20 2 'Structure model' '_struct_ref_seq_dif.details' 21 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.4_1496)' ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ASN 298 ? ? O A HOH 637 ? ? 2.11 2 1 OE1 A GLU 422 ? ? O A HOH 639 ? ? 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 PRO _pdbx_validate_rmsd_angle.auth_seq_id_1 417 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 417 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CB _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 417 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 109.99 _pdbx_validate_rmsd_angle.angle_target_value 102.60 _pdbx_validate_rmsd_angle.angle_deviation 7.39 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 313 ? ? -129.47 -166.03 2 1 ASP A 321 ? ? -151.82 78.79 3 1 PRO A 417 ? ? -97.93 33.57 4 1 ILE A 423 ? ? -115.49 -168.01 5 1 ASN A 424 ? ? -118.64 64.20 6 1 GLU B 64 ? ? 59.77 13.75 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 268 ? CG ? A LEU 30 CG 2 1 Y 1 A LEU 268 ? CD1 ? A LEU 30 CD1 3 1 Y 1 A LEU 268 ? CD2 ? A LEU 30 CD2 4 1 Y 1 A LYS 278 ? CG ? A LYS 40 CG 5 1 Y 1 A LYS 278 ? CD ? A LYS 40 CD 6 1 Y 1 A LYS 278 ? CE ? A LYS 40 CE 7 1 Y 1 A LYS 278 ? NZ ? A LYS 40 NZ 8 1 Y 1 A LYS 282 ? CG ? A LYS 44 CG 9 1 Y 1 A LYS 282 ? CD ? A LYS 44 CD 10 1 Y 1 A LYS 282 ? CE ? A LYS 44 CE 11 1 Y 1 A LYS 282 ? NZ ? A LYS 44 NZ 12 1 Y 1 A LYS 283 ? CG ? A LYS 45 CG 13 1 Y 1 A LYS 283 ? CD ? A LYS 45 CD 14 1 Y 1 A LYS 283 ? CE ? A LYS 45 CE 15 1 Y 1 A LYS 283 ? NZ ? A LYS 45 NZ 16 1 Y 1 A PRO 417 ? CG ? A PRO 179 CG 17 1 Y 1 A PRO 417 ? CD ? A PRO 179 CD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 239 ? A GLY 1 2 1 Y 1 A PRO 240 ? A PRO 2 3 1 Y 1 A LEU 241 ? A LEU 3 4 1 Y 1 A GLY 242 ? A GLY 4 5 1 Y 1 A SER 243 ? A SER 5 6 1 Y 1 A MET 244 ? A MET 6 7 1 Y 1 A ALA 245 ? A ALA 7 8 1 Y 1 A GLY 246 ? A GLY 8 9 1 Y 1 A THR 247 ? A THR 9 10 1 Y 1 A PHE 248 ? A PHE 10 11 1 Y 1 A VAL 434 ? A VAL 196 12 1 Y 1 A LYS 435 ? A LYS 197 13 1 Y 1 B GLY -4 ? B GLY 1 14 1 Y 1 B PRO -3 ? B PRO 2 15 1 Y 1 B LEU -2 ? B LEU 3 16 1 Y 1 B GLY -1 ? B GLY 4 17 1 Y 1 B SER 0 ? B SER 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 THR N N N N 314 THR CA C N S 315 THR C C N N 316 THR O O N N 317 THR CB C N R 318 THR OG1 O N N 319 THR CG2 C N N 320 THR OXT O N N 321 THR H H N N 322 THR H2 H N N 323 THR HA H N N 324 THR HB H N N 325 THR HG1 H N N 326 THR HG21 H N N 327 THR HG22 H N N 328 THR HG23 H N N 329 THR HXT H N N 330 TRP N N N N 331 TRP CA C N S 332 TRP C C N N 333 TRP O O N N 334 TRP CB C N N 335 TRP CG C Y N 336 TRP CD1 C Y N 337 TRP CD2 C Y N 338 TRP NE1 N Y N 339 TRP CE2 C Y N 340 TRP CE3 C Y N 341 TRP CZ2 C Y N 342 TRP CZ3 C Y N 343 TRP CH2 C Y N 344 TRP OXT O N N 345 TRP H H N N 346 TRP H2 H N N 347 TRP HA H N N 348 TRP HB2 H N N 349 TRP HB3 H N N 350 TRP HD1 H N N 351 TRP HE1 H N N 352 TRP HE3 H N N 353 TRP HZ2 H N N 354 TRP HZ3 H N N 355 TRP HH2 H N N 356 TRP HXT H N N 357 TYR N N N N 358 TYR CA C N S 359 TYR C C N N 360 TYR O O N N 361 TYR CB C N N 362 TYR CG C Y N 363 TYR CD1 C Y N 364 TYR CD2 C Y N 365 TYR CE1 C Y N 366 TYR CE2 C Y N 367 TYR CZ C Y N 368 TYR OH O N N 369 TYR OXT O N N 370 TYR H H N N 371 TYR H2 H N N 372 TYR HA H N N 373 TYR HB2 H N N 374 TYR HB3 H N N 375 TYR HD1 H N N 376 TYR HD2 H N N 377 TYR HE1 H N N 378 TYR HE2 H N N 379 TYR HH H N N 380 TYR HXT H N N 381 VAL N N N N 382 VAL CA C N S 383 VAL C C N N 384 VAL O O N N 385 VAL CB C N N 386 VAL CG1 C N N 387 VAL CG2 C N N 388 VAL OXT O N N 389 VAL H H N N 390 VAL H2 H N N 391 VAL HA H N N 392 VAL HB H N N 393 VAL HG11 H N N 394 VAL HG12 H N N 395 VAL HG13 H N N 396 VAL HG21 H N N 397 VAL HG22 H N N 398 VAL HG23 H N N 399 VAL HXT H N N 400 ZN ZN ZN N N 401 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4K1R _pdbx_initial_refinement_model.details 'PDB Entry 4K1R' #