data_4PR7
#
_entry.id 4PR7
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.379
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4PR7 pdb_00004pr7 10.2210/pdb4pr7/pdb
RCSB RCSB085121 ? ?
WWPDB D_1000085121 ? ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 4FQE
_pdbx_database_related.details .
_pdbx_database_related.content_type unspecified
#
_pdbx_database_status.entry_id 4PR7
_pdbx_database_status.status_code REL
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2014-03-05
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Hutter, C.' 1
'Peneff, C.M.' 2
'Wirth, C.' 3
'Schirmer, T.' 4
#
_citation.id primary
_citation.title 'Structure of the oligogalacturonate-specific KdgM porin.'
_citation.journal_abbrev 'Acta Crystallogr.,Sect.D'
_citation.journal_volume 70
_citation.page_first 1770
_citation.page_last 1778
_citation.year 2014
_citation.journal_id_ASTM ABCRE6
_citation.country DK
_citation.journal_id_ISSN 0907-4449
_citation.journal_id_CSD 0766
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 24914987
_citation.pdbx_database_id_DOI 10.1107/S1399004714007147
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Hutter, C.A.' 1 ?
primary 'Lehner, R.' 2 ?
primary 'Wirth, C.h.' 3 ?
primary 'Condemine, G.' 4 ?
primary 'Peneff, C.' 5 ?
primary 'Schirmer, T.' 6 ?
#
_cell.length_a 36.8569
_cell.length_b 59.7311
_cell.length_c 51.5959
_cell.angle_alpha 90.0000
_cell.angle_beta 106.5412
_cell.angle_gamma 90.0000
_cell.entry_id 4PR7
_cell.pdbx_unique_axis ?
_cell.Z_PDB 2
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.entry_id 4PR7
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Oligogalacturonate-specific porin KdgM' 25546.006 1 ? ? 'UNP residues 21-236' ?
2 branched man
;alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
;
898.634 1 ? ? ? ?
3 non-polymer syn N-OCTANE 114.229 4 ? ? ? ?
4 non-polymer syn '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' 306.438 2 ? ? ? ?
5 water nat water 18.015 41 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;VSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKWAQSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGF
SLESGSSNNNYRPYLRGRANVTDDLSVALRYRPYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGTSG
KTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDERQTRYRVGVQYSFHHHHHH
;
_entity_poly.pdbx_seq_one_letter_code_can
;VSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKWAQSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGF
SLESGSSNNNYRPYLRGRANVTDDLSVALRYRPYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGTSG
KTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDERQTRYRVGVQYSFHHHHHH
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 VAL n
1 2 SER n
1 3 ILE n
1 4 ASP n
1 5 TYR n
1 6 ARG n
1 7 HIS n
1 8 GLU n
1 9 MET n
1 10 GLN n
1 11 ASP n
1 12 THR n
1 13 ALA n
1 14 GLN n
1 15 ALA n
1 16 GLY n
1 17 HIS n
1 18 LYS n
1 19 ASP n
1 20 ARG n
1 21 LEU n
1 22 LEU n
1 23 ILE n
1 24 SER n
1 25 HIS n
1 26 ARG n
1 27 PHE n
1 28 ALA n
1 29 ASN n
1 30 GLY n
1 31 PHE n
1 32 GLY n
1 33 LEU n
1 34 SER n
1 35 SER n
1 36 GLU n
1 37 VAL n
1 38 LYS n
1 39 TRP n
1 40 ALA n
1 41 GLN n
1 42 SER n
1 43 SER n
1 44 ALA n
1 45 ASP n
1 46 LYS n
1 47 THR n
1 48 PRO n
1 49 ASN n
1 50 LYS n
1 51 PRO n
1 52 PHE n
1 53 ASN n
1 54 GLU n
1 55 GLN n
1 56 VAL n
1 57 SER n
1 58 ASN n
1 59 GLY n
1 60 THR n
1 61 GLU n
1 62 VAL n
1 63 VAL n
1 64 ALA n
1 65 SER n
1 66 TYR n
1 67 VAL n
1 68 TYR n
1 69 LYS n
1 70 PHE n
1 71 ASN n
1 72 SER n
1 73 VAL n
1 74 PHE n
1 75 SER n
1 76 ILE n
1 77 GLU n
1 78 PRO n
1 79 GLY n
1 80 PHE n
1 81 SER n
1 82 LEU n
1 83 GLU n
1 84 SER n
1 85 GLY n
1 86 SER n
1 87 SER n
1 88 ASN n
1 89 ASN n
1 90 ASN n
1 91 TYR n
1 92 ARG n
1 93 PRO n
1 94 TYR n
1 95 LEU n
1 96 ARG n
1 97 GLY n
1 98 ARG n
1 99 ALA n
1 100 ASN n
1 101 VAL n
1 102 THR n
1 103 ASP n
1 104 ASP n
1 105 LEU n
1 106 SER n
1 107 VAL n
1 108 ALA n
1 109 LEU n
1 110 ARG n
1 111 TYR n
1 112 ARG n
1 113 PRO n
1 114 TYR n
1 115 PHE n
1 116 LYS n
1 117 ARG n
1 118 ASN n
1 119 SER n
1 120 GLY n
1 121 ASN n
1 122 ILE n
1 123 GLY n
1 124 LYS n
1 125 ASP n
1 126 ASN n
1 127 THR n
1 128 MET n
1 129 ASP n
1 130 LYS n
1 131 GLY n
1 132 TYR n
1 133 THR n
1 134 LEU n
1 135 THR n
1 136 GLY n
1 137 ASN n
1 138 ILE n
1 139 ASP n
1 140 TYR n
1 141 THR n
1 142 PHE n
1 143 LEU n
1 144 LYS n
1 145 ASP n
1 146 TYR n
1 147 THR n
1 148 ILE n
1 149 GLY n
1 150 TYR n
1 151 GLU n
1 152 LEU n
1 153 GLU n
1 154 TYR n
1 155 LYS n
1 156 LYS n
1 157 GLY n
1 158 THR n
1 159 SER n
1 160 GLY n
1 161 LYS n
1 162 THR n
1 163 ILE n
1 164 LEU n
1 165 SER n
1 166 ASP n
1 167 ASN n
1 168 ASP n
1 169 ASP n
1 170 TYR n
1 171 ASP n
1 172 ILE n
1 173 THR n
1 174 HIS n
1 175 ASN n
1 176 VAL n
1 177 LYS n
1 178 LEU n
1 179 SER n
1 180 TYR n
1 181 LYS n
1 182 TRP n
1 183 ASP n
1 184 LYS n
1 185 ASN n
1 186 TRP n
1 187 LYS n
1 188 PRO n
1 189 TYR n
1 190 VAL n
1 191 GLU n
1 192 VAL n
1 193 GLY n
1 194 ASN n
1 195 VAL n
1 196 SER n
1 197 GLY n
1 198 SER n
1 199 GLU n
1 200 THR n
1 201 THR n
1 202 ASP n
1 203 GLU n
1 204 ARG n
1 205 GLN n
1 206 THR n
1 207 ARG n
1 208 TYR n
1 209 ARG n
1 210 VAL n
1 211 GLY n
1 212 VAL n
1 213 GLN n
1 214 TYR n
1 215 SER n
1 216 PHE n
1 217 HIS n
1 218 HIS n
1 219 HIS n
1 220 HIS n
1 221 HIS n
1 222 HIS n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'kdgM, Dda3937_03362'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain 3937
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Dickeya dadantii'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 204038
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21(DE3)omp8/pLys'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name pKSM717
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code KDGM_DICD3
_struct_ref.pdbx_db_accession Q934G3
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;VSIDYRHEMQDTAQAGHKDRLLISHRFANGFGLSSEVKWAQSSADKTPNKPFNEQVSNGTEVVASYVYKFNSVFSIEPGF
SLESGSSNNNYRPYLRGRANVTDDLSVALRYRPYFKRNSGNIGKDNTMDKGYTLTGNIDYTFLKDYTIGYELEYKKGTSG
KTILSDNDDYDITHNVKLSYKWDKNWKPYVEVGNVSGSETTDERQTRYRVGVQYSF
;
_struct_ref.pdbx_align_begin 21
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 4PR7
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 216
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession Q934G3
_struct_ref_seq.db_align_beg 21
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 236
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 216
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 4PR7 HIS A 217 ? UNP Q934G3 ? ? 'expression tag' 217 1
1 4PR7 HIS A 218 ? UNP Q934G3 ? ? 'expression tag' 218 2
1 4PR7 HIS A 219 ? UNP Q934G3 ? ? 'expression tag' 219 3
1 4PR7 HIS A 220 ? UNP Q934G3 ? ? 'expression tag' 220 4
1 4PR7 HIS A 221 ? UNP Q934G3 ? ? 'expression tag' 221 5
1 4PR7 HIS A 222 ? UNP Q934G3 ? ? 'expression tag' 222 6
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ADA 'D-saccharide, alpha linking' . 'alpha-D-galactopyranuronic acid'
'alpha-D-galacturonic acid; D-galacturonic acid; galacturonic acid; ALPHA D-GALACTURONIC ACID' 'C6 H10 O7' 194.139
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
C8E non-polymer . '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' ? 'C16 H34 O5' 306.438
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
OCT non-polymer . N-OCTANE ? 'C8 H18' 114.229
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.crystals_number 1
_exptl.entry_id 4PR7
_exptl.method 'X-RAY DIFFRACTION'
#
_exptl_crystal.id 1
_exptl_crystal.density_percent_sol 44.0
_exptl_crystal.density_Matthews 2.2
_exptl_crystal.density_meas ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.pH 6.0
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.pdbx_details
'0.1 M MES, 22% MPD, 36 mM digalacturonate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'MARMOSAIC 225 mm CCD'
_diffrn_detector.pdbx_collection_date 2011-04-01
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.monochromator 'Si(111)'
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.008
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'SLS BEAMLINE X06DA'
_diffrn_source.pdbx_wavelength_list 1.008
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_site SLS
_diffrn_source.pdbx_synchrotron_beamline X06DA
#
_reflns.d_resolution_low 59.74
_reflns.d_resolution_high 2.10
_reflns.number_obs 11990
_reflns.pdbx_Rmerge_I_obs 0.078
_reflns.pdbx_netI_over_sigmaI 9.9198
_reflns.percent_possible_obs 94.90
_reflns.pdbx_redundancy 2.86
_reflns.observed_criterion_sigma_F 0
_reflns.observed_criterion_sigma_I -3.0
_reflns.entry_id 4PR7
_reflns.number_all 11990
_reflns.pdbx_Rsym_value ?
_reflns.B_iso_Wilson_estimate ?
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
loop_
_reflns_shell.d_res_low
_reflns_shell.d_res_high
_reflns_shell.number_measured_all
_reflns_shell.number_unique_all
_reflns_shell.Rmerge_I_obs
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.percent_possible_all
_reflns_shell.pdbx_redundancy
_reflns_shell.percent_possible_obs
_reflns_shell.pdbx_Rsym_value
_reflns_shell.number_measured_obs
_reflns_shell.number_unique_obs
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
2.21 2.10 2961 1419 0.31 2.44 77.47 2.09 ? ? ? ? ? 1 1
2.35 2.21 3859 1602 0.26 2.79 93.20 2.41 ? ? ? ? ? 2 1
2.51 2.35 4390 1593 0.24 3.00 97.97 2.76 ? ? ? ? ? 3 1
2.71 2.51 4750 1518 0.21 3.28 98.68 3.13 ? ? ? ? ? 4 1
2.97 2.71 4343 1375 0.13 5.25 98.83 3.16 ? ? ? ? ? 5 1
3.32 2.97 3980 1260 0.08 7.92 99.15 3.16 ? ? ? ? ? 6 1
3.83 3.32 3492 1106 0.06 7.61 99.13 3.16 ? ? ? ? ? 7 1
4.70 3.83 3007 963 0.04 12.20 99.57 3.12 ? ? ? ? ? 8 1
6.64 4.70 2308 741 0.04 13.12 99.65 3.11 ? ? ? ? ? 9 1
59.74 6.64 1233 413 0.03 14.74 97.89 2.99 ? ? ? ? ? 10 1
#
_refine.entry_id 4PR7
_refine.ls_d_res_high 2.100
_refine.ls_d_res_low 30.0
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_percent_reflns_obs 93.99
_refine.ls_number_reflns_obs 11896
_refine.ls_number_reflns_all 11896
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.ls_R_factor_all 0.2100
_refine.ls_R_factor_obs 0.2100
_refine.ls_R_factor_R_work 0.2081
_refine.ls_wR_factor_R_work ?
_refine.ls_R_factor_R_free 0.2455
_refine.ls_wR_factor_R_free ?
_refine.ls_percent_reflns_R_free 4.8000
_refine.ls_number_reflns_R_free 576
_refine.ls_R_factor_R_free_error ?
_refine.B_iso_mean 33.262
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_isotropic_thermal_model ?
_refine.aniso_B[1][1] 0.3100
_refine.aniso_B[2][2] -1.1900
_refine.aniso_B[3][3] 0.7500
_refine.aniso_B[1][2] 0.0000
_refine.aniso_B[1][3] -0.0100
_refine.aniso_B[2][3] -0.0000
_refine.correlation_coeff_Fo_to_Fc 0.9430
_refine.correlation_coeff_Fo_to_Fc_free 0.9170
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_overall_ESU_R_Free 0.1970
_refine.overall_SU_ML 0.1410
_refine.overall_SU_B 10.5420
_refine.solvent_model_details MASK
_refine.pdbx_solvent_vdw_probe_radii 1.2000
_refine.pdbx_solvent_ion_probe_radii 0.8000
_refine.pdbx_solvent_shrinkage_radii 0.8000
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.pdbx_starting_model 'PDB ENTRY 4FQE'
_refine.pdbx_method_to_determine_struct 'DIFFERENCE FOURIER'
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.overall_FOM_work_R_set ?
_refine.B_iso_max 89.990
_refine.B_iso_min 7.950
_refine.occupancy_max 1.000
_refine.occupancy_min 0.000
_refine.pdbx_ls_sigma_I 0
_refine.ls_redundancy_reflns_obs ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.overall_FOM_free_R_set ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1417
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 135
_refine_hist.number_atoms_solvent 41
_refine_hist.number_atoms_total 1593
_refine_hist.d_res_high 2.100
_refine_hist.d_res_low 30.0
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
r_bond_refined_d 1519 0.008 0.019 ? ? 'X-RAY DIFFRACTION'
r_bond_other_d 1463 0.001 0.020 ? ? 'X-RAY DIFFRACTION'
r_angle_refined_deg 2015 1.223 1.960 ? ? 'X-RAY DIFFRACTION'
r_angle_other_deg 3356 0.635 3.000 ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_1_deg 165 6.827 5.000 ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_2_deg 77 31.608 22.597 ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_3_deg 240 16.711 15.000 ? ? 'X-RAY DIFFRACTION'
r_dihedral_angle_4_deg 12 19.541 15.000 ? ? 'X-RAY DIFFRACTION'
r_chiral_restr 199 0.078 0.200 ? ? 'X-RAY DIFFRACTION'
r_gen_planes_refined 1629 0.005 0.020 ? ? 'X-RAY DIFFRACTION'
r_gen_planes_other 385 0.001 0.020 ? ? 'X-RAY DIFFRACTION'
#
_refine_ls_shell.d_res_high 2.100
_refine_ls_shell.d_res_low 2.154
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.percent_reflns_obs 62.26
_refine_ls_shell.number_reflns_R_work 562
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.R_factor_R_work 0.2020
_refine_ls_shell.R_factor_R_free 0.2370
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 32
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.number_reflns_all 594
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_struct.entry_id 4PR7
_struct.title 'KdgM porin in complex with disordered oligogalacturonate'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 4PR7
_struct_keywords.text 'beta barrel, oligogalacturonate specificity, transport protein, OUTER MEMBRANE PROTEIN'
_struct_keywords.pdbx_keywords 'OUTER MEMBRANE PROTEIN'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 3 ?
E N N 3 ?
F N N 3 ?
G N N 4 ?
H N N 4 ?
I N N 5 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 1 B ADA 2 1_555 ? ? ? ? ? ? ? 1.436 ? ?
covale2 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 2 B ADA 3 1_555 ? ? ? ? ? ? ? 1.438 ? ?
covale3 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 3 B ADA 4 1_555 ? ? ? ? ? ? ? 1.444 ? ?
covale4 covale both ? B ADA . O4 ? ? ? 1_555 B ADA . C1 ? ? B ADA 4 B ADA 5 1_555 ? ? ? ? ? ? ? 1.439 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 4 ?
B ? 14 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
B 4 5 ? anti-parallel
B 5 6 ? anti-parallel
B 6 7 ? anti-parallel
B 7 8 ? anti-parallel
B 8 9 ? anti-parallel
B 9 10 ? anti-parallel
B 10 11 ? anti-parallel
B 11 12 ? anti-parallel
B 12 13 ? anti-parallel
B 13 14 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 TYR A 68 ? LYS A 69 ? TYR A 68 LYS A 69
A 2 PHE A 74 ? GLY A 85 ? PHE A 74 GLY A 85
A 3 TYR A 94 ? ASN A 100 ? TYR A 94 ASN A 100
A 4 LEU A 105 ? ARG A 117 ? LEU A 105 ARG A 117
B 1 TYR A 68 ? LYS A 69 ? TYR A 68 LYS A 69
B 2 PHE A 74 ? GLY A 85 ? PHE A 74 GLY A 85
B 3 SER A 57 ? TYR A 66 ? SER A 57 TYR A 66
B 4 PHE A 31 ? GLN A 41 ? PHE A 31 GLN A 41
B 5 HIS A 17 ? ARG A 26 ? HIS A 17 ARG A 26
B 6 SER A 2 ? GLN A 10 ? SER A 2 GLN A 10
B 7 GLN A 205 ? SER A 215 ? GLN A 205 SER A 215
B 8 TRP A 186 ? SER A 196 ? TRP A 186 SER A 196
B 9 ASP A 171 ? TYR A 180 ? ASP A 171 TYR A 180
B 10 TYR A 146 ? GLY A 157 ? TYR A 146 GLY A 157
B 11 GLY A 131 ? PHE A 142 ? GLY A 131 PHE A 142
B 12 LEU A 105 ? ARG A 117 ? LEU A 105 ARG A 117
B 13 ASN A 89 ? TYR A 91 ? ASN A 89 TYR A 91
B 14 PHE A 74 ? GLY A 85 ? PHE A 74 GLY A 85
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N TYR A 68 ? N TYR A 68 O ILE A 76 ? O ILE A 76
A 2 3 N GLY A 79 ? N GLY A 79 O TYR A 94 ? O TYR A 94
A 3 4 N ALA A 99 ? N ALA A 99 O VAL A 107 ? O VAL A 107
B 1 2 N TYR A 68 ? N TYR A 68 O ILE A 76 ? O ILE A 76
B 2 3 O SER A 84 ? O SER A 84 N THR A 60 ? N THR A 60
B 3 4 O GLU A 61 ? O GLU A 61 N GLU A 36 ? N GLU A 36
B 4 5 O TRP A 39 ? O TRP A 39 N ASP A 19 ? N ASP A 19
B 5 6 O LEU A 22 ? O LEU A 22 N ASP A 4 ? N ASP A 4
B 6 7 N MET A 9 ? N MET A 9 O TYR A 208 ? O TYR A 208
B 7 8 O ARG A 207 ? O ARG A 207 N GLY A 193 ? N GLY A 193
B 8 9 O VAL A 190 ? O VAL A 190 N LEU A 178 ? N LEU A 178
B 9 10 O ASN A 175 ? O ASN A 175 N GLU A 151 ? N GLU A 151
B 10 11 O LEU A 152 ? O LEU A 152 N GLY A 136 ? N GLY A 136
B 11 12 O THR A 133 ? O THR A 133 N ARG A 112 ? N ARG A 112
B 12 13 O ARG A 117 ? O ARG A 117 N ASN A 89 ? N ASN A 89
B 13 14 O ASN A 90 ? O ASN A 90 N GLU A 83 ? N GLU A 83
#
_atom_sites.entry_id 4PR7
_atom_sites.fract_transf_matrix[1][1] 0.027132
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.008058
_atom_sites.fract_transf_matrix[2][1] -0.000000
_atom_sites.fract_transf_matrix[2][2] 0.016742
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] -0.000000
_atom_sites.fract_transf_matrix[3][3] 0.020218
_atom_sites.fract_transf_vector[1] 0.000000
_atom_sites.fract_transf_vector[2] 0.000000
_atom_sites.fract_transf_vector[3] 0.000000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 VAL 1 1 1 VAL VAL A . n
A 1 2 SER 2 2 2 SER SER A . n
A 1 3 ILE 3 3 3 ILE ILE A . n
A 1 4 ASP 4 4 4 ASP ASP A . n
A 1 5 TYR 5 5 5 TYR TYR A . n
A 1 6 ARG 6 6 6 ARG ARG A . n
A 1 7 HIS 7 7 7 HIS HIS A . n
A 1 8 GLU 8 8 8 GLU GLU A . n
A 1 9 MET 9 9 9 MET MET A . n
A 1 10 GLN 10 10 10 GLN GLN A . n
A 1 11 ASP 11 11 11 ASP ASP A . n
A 1 12 THR 12 12 ? ? ? A . n
A 1 13 ALA 13 13 ? ? ? A . n
A 1 14 GLN 14 14 ? ? ? A . n
A 1 15 ALA 15 15 ? ? ? A . n
A 1 16 GLY 16 16 16 GLY GLY A . n
A 1 17 HIS 17 17 17 HIS HIS A . n
A 1 18 LYS 18 18 18 LYS LYS A . n
A 1 19 ASP 19 19 19 ASP ASP A . n
A 1 20 ARG 20 20 20 ARG ARG A . n
A 1 21 LEU 21 21 21 LEU LEU A . n
A 1 22 LEU 22 22 22 LEU LEU A . n
A 1 23 ILE 23 23 23 ILE ILE A . n
A 1 24 SER 24 24 24 SER SER A . n
A 1 25 HIS 25 25 25 HIS HIS A . n
A 1 26 ARG 26 26 26 ARG ARG A . n
A 1 27 PHE 27 27 27 PHE PHE A . n
A 1 28 ALA 28 28 28 ALA ALA A . n
A 1 29 ASN 29 29 29 ASN ASN A . n
A 1 30 GLY 30 30 30 GLY GLY A . n
A 1 31 PHE 31 31 31 PHE PHE A . n
A 1 32 GLY 32 32 32 GLY GLY A . n
A 1 33 LEU 33 33 33 LEU LEU A . n
A 1 34 SER 34 34 34 SER SER A . n
A 1 35 SER 35 35 35 SER SER A . n
A 1 36 GLU 36 36 36 GLU GLU A . n
A 1 37 VAL 37 37 37 VAL VAL A . n
A 1 38 LYS 38 38 38 LYS LYS A . n
A 1 39 TRP 39 39 39 TRP TRP A . n
A 1 40 ALA 40 40 40 ALA ALA A . n
A 1 41 GLN 41 41 41 GLN GLN A . n
A 1 42 SER 42 42 42 SER SER A . n
A 1 43 SER 43 43 ? ? ? A . n
A 1 44 ALA 44 44 ? ? ? A . n
A 1 45 ASP 45 45 ? ? ? A . n
A 1 46 LYS 46 46 ? ? ? A . n
A 1 47 THR 47 47 ? ? ? A . n
A 1 48 PRO 48 48 ? ? ? A . n
A 1 49 ASN 49 49 ? ? ? A . n
A 1 50 LYS 50 50 ? ? ? A . n
A 1 51 PRO 51 51 ? ? ? A . n
A 1 52 PHE 52 52 ? ? ? A . n
A 1 53 ASN 53 53 ? ? ? A . n
A 1 54 GLU 54 54 ? ? ? A . n
A 1 55 GLN 55 55 ? ? ? A . n
A 1 56 VAL 56 56 56 VAL VAL A . n
A 1 57 SER 57 57 57 SER SER A . n
A 1 58 ASN 58 58 58 ASN ASN A . n
A 1 59 GLY 59 59 59 GLY GLY A . n
A 1 60 THR 60 60 60 THR THR A . n
A 1 61 GLU 61 61 61 GLU GLU A . n
A 1 62 VAL 62 62 62 VAL VAL A . n
A 1 63 VAL 63 63 63 VAL VAL A . n
A 1 64 ALA 64 64 64 ALA ALA A . n
A 1 65 SER 65 65 65 SER SER A . n
A 1 66 TYR 66 66 66 TYR TYR A . n
A 1 67 VAL 67 67 67 VAL VAL A . n
A 1 68 TYR 68 68 68 TYR TYR A . n
A 1 69 LYS 69 69 69 LYS LYS A . n
A 1 70 PHE 70 70 70 PHE PHE A . n
A 1 71 ASN 71 71 71 ASN ASN A . n
A 1 72 SER 72 72 72 SER SER A . n
A 1 73 VAL 73 73 73 VAL VAL A . n
A 1 74 PHE 74 74 74 PHE PHE A . n
A 1 75 SER 75 75 75 SER SER A . n
A 1 76 ILE 76 76 76 ILE ILE A . n
A 1 77 GLU 77 77 77 GLU GLU A . n
A 1 78 PRO 78 78 78 PRO PRO A . n
A 1 79 GLY 79 79 79 GLY GLY A . n
A 1 80 PHE 80 80 80 PHE PHE A . n
A 1 81 SER 81 81 81 SER SER A . n
A 1 82 LEU 82 82 82 LEU LEU A . n
A 1 83 GLU 83 83 83 GLU GLU A . n
A 1 84 SER 84 84 84 SER SER A . n
A 1 85 GLY 85 85 85 GLY GLY A . n
A 1 86 SER 86 86 86 SER SER A . n
A 1 87 SER 87 87 87 SER SER A . n
A 1 88 ASN 88 88 88 ASN ASN A . n
A 1 89 ASN 89 89 89 ASN ASN A . n
A 1 90 ASN 90 90 90 ASN ASN A . n
A 1 91 TYR 91 91 91 TYR TYR A . n
A 1 92 ARG 92 92 92 ARG ARG A . n
A 1 93 PRO 93 93 93 PRO PRO A . n
A 1 94 TYR 94 94 94 TYR TYR A . n
A 1 95 LEU 95 95 95 LEU LEU A . n
A 1 96 ARG 96 96 96 ARG ARG A . n
A 1 97 GLY 97 97 97 GLY GLY A . n
A 1 98 ARG 98 98 98 ARG ARG A . n
A 1 99 ALA 99 99 99 ALA ALA A . n
A 1 100 ASN 100 100 100 ASN ASN A . n
A 1 101 VAL 101 101 101 VAL VAL A . n
A 1 102 THR 102 102 102 THR THR A . n
A 1 103 ASP 103 103 103 ASP ASP A . n
A 1 104 ASP 104 104 104 ASP ASP A . n
A 1 105 LEU 105 105 105 LEU LEU A . n
A 1 106 SER 106 106 106 SER SER A . n
A 1 107 VAL 107 107 107 VAL VAL A . n
A 1 108 ALA 108 108 108 ALA ALA A . n
A 1 109 LEU 109 109 109 LEU LEU A . n
A 1 110 ARG 110 110 110 ARG ARG A . n
A 1 111 TYR 111 111 111 TYR TYR A . n
A 1 112 ARG 112 112 112 ARG ARG A . n
A 1 113 PRO 113 113 113 PRO PRO A . n
A 1 114 TYR 114 114 114 TYR TYR A . n
A 1 115 PHE 115 115 115 PHE PHE A . n
A 1 116 LYS 116 116 116 LYS LYS A . n
A 1 117 ARG 117 117 117 ARG ARG A . n
A 1 118 ASN 118 118 ? ? ? A . n
A 1 119 SER 119 119 ? ? ? A . n
A 1 120 GLY 120 120 ? ? ? A . n
A 1 121 ASN 121 121 ? ? ? A . n
A 1 122 ILE 122 122 ? ? ? A . n
A 1 123 GLY 123 123 ? ? ? A . n
A 1 124 LYS 124 124 ? ? ? A . n
A 1 125 ASP 125 125 ? ? ? A . n
A 1 126 ASN 126 126 ? ? ? A . n
A 1 127 THR 127 127 ? ? ? A . n
A 1 128 MET 128 128 ? ? ? A . n
A 1 129 ASP 129 129 ? ? ? A . n
A 1 130 LYS 130 130 130 LYS LYS A . n
A 1 131 GLY 131 131 131 GLY GLY A . n
A 1 132 TYR 132 132 132 TYR TYR A . n
A 1 133 THR 133 133 133 THR THR A . n
A 1 134 LEU 134 134 134 LEU LEU A . n
A 1 135 THR 135 135 135 THR THR A . n
A 1 136 GLY 136 136 136 GLY GLY A . n
A 1 137 ASN 137 137 137 ASN ASN A . n
A 1 138 ILE 138 138 138 ILE ILE A . n
A 1 139 ASP 139 139 139 ASP ASP A . n
A 1 140 TYR 140 140 140 TYR TYR A . n
A 1 141 THR 141 141 141 THR THR A . n
A 1 142 PHE 142 142 142 PHE PHE A . n
A 1 143 LEU 143 143 143 LEU LEU A . n
A 1 144 LYS 144 144 144 LYS LYS A . n
A 1 145 ASP 145 145 145 ASP ASP A . n
A 1 146 TYR 146 146 146 TYR TYR A . n
A 1 147 THR 147 147 147 THR THR A . n
A 1 148 ILE 148 148 148 ILE ILE A . n
A 1 149 GLY 149 149 149 GLY GLY A . n
A 1 150 TYR 150 150 150 TYR TYR A . n
A 1 151 GLU 151 151 151 GLU GLU A . n
A 1 152 LEU 152 152 152 LEU LEU A . n
A 1 153 GLU 153 153 153 GLU GLU A . n
A 1 154 TYR 154 154 154 TYR TYR A . n
A 1 155 LYS 155 155 155 LYS LYS A . n
A 1 156 LYS 156 156 156 LYS LYS A . n
A 1 157 GLY 157 157 157 GLY GLY A . n
A 1 158 THR 158 158 158 THR THR A . n
A 1 159 SER 159 159 159 SER SER A . n
A 1 160 GLY 160 160 ? ? ? A . n
A 1 161 LYS 161 161 ? ? ? A . n
A 1 162 THR 162 162 ? ? ? A . n
A 1 163 ILE 163 163 ? ? ? A . n
A 1 164 LEU 164 164 ? ? ? A . n
A 1 165 SER 165 165 ? ? ? A . n
A 1 166 ASP 166 166 ? ? ? A . n
A 1 167 ASN 167 167 ? ? ? A . n
A 1 168 ASP 168 168 ? ? ? A . n
A 1 169 ASP 169 169 ? ? ? A . n
A 1 170 TYR 170 170 170 TYR TYR A . n
A 1 171 ASP 171 171 171 ASP ASP A . n
A 1 172 ILE 172 172 172 ILE ILE A . n
A 1 173 THR 173 173 173 THR THR A . n
A 1 174 HIS 174 174 174 HIS HIS A . n
A 1 175 ASN 175 175 175 ASN ASN A . n
A 1 176 VAL 176 176 176 VAL VAL A . n
A 1 177 LYS 177 177 177 LYS LYS A . n
A 1 178 LEU 178 178 178 LEU LEU A . n
A 1 179 SER 179 179 179 SER SER A . n
A 1 180 TYR 180 180 180 TYR TYR A . n
A 1 181 LYS 181 181 181 LYS LYS A . n
A 1 182 TRP 182 182 182 TRP TRP A . n
A 1 183 ASP 183 183 183 ASP ASP A . n
A 1 184 LYS 184 184 184 LYS LYS A . n
A 1 185 ASN 185 185 185 ASN ASN A . n
A 1 186 TRP 186 186 186 TRP TRP A . n
A 1 187 LYS 187 187 187 LYS LYS A . n
A 1 188 PRO 188 188 188 PRO PRO A . n
A 1 189 TYR 189 189 189 TYR TYR A . n
A 1 190 VAL 190 190 190 VAL VAL A . n
A 1 191 GLU 191 191 191 GLU GLU A . n
A 1 192 VAL 192 192 192 VAL VAL A . n
A 1 193 GLY 193 193 193 GLY GLY A . n
A 1 194 ASN 194 194 194 ASN ASN A . n
A 1 195 VAL 195 195 195 VAL VAL A . n
A 1 196 SER 196 196 196 SER SER A . n
A 1 197 GLY 197 197 ? ? ? A . n
A 1 198 SER 198 198 ? ? ? A . n
A 1 199 GLU 199 199 ? ? ? A . n
A 1 200 THR 200 200 ? ? ? A . n
A 1 201 THR 201 201 ? ? ? A . n
A 1 202 ASP 202 202 ? ? ? A . n
A 1 203 GLU 203 203 ? ? ? A . n
A 1 204 ARG 204 204 204 ARG ARG A . n
A 1 205 GLN 205 205 205 GLN GLN A . n
A 1 206 THR 206 206 206 THR THR A . n
A 1 207 ARG 207 207 207 ARG ARG A . n
A 1 208 TYR 208 208 208 TYR TYR A . n
A 1 209 ARG 209 209 209 ARG ARG A . n
A 1 210 VAL 210 210 210 VAL VAL A . n
A 1 211 GLY 211 211 211 GLY GLY A . n
A 1 212 VAL 212 212 212 VAL VAL A . n
A 1 213 GLN 213 213 213 GLN GLN A . n
A 1 214 TYR 214 214 214 TYR TYR A . n
A 1 215 SER 215 215 215 SER SER A . n
A 1 216 PHE 216 216 216 PHE PHE A . n
A 1 217 HIS 217 217 217 HIS HIS A . n
A 1 218 HIS 218 218 ? ? ? A . n
A 1 219 HIS 219 219 ? ? ? A . n
A 1 220 HIS 220 220 ? ? ? A . n
A 1 221 HIS 221 221 ? ? ? A . n
A 1 222 HIS 222 222 ? ? ? A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 OCT 1 301 1 OCT OCT A .
D 3 OCT 1 302 2 OCT OCT A .
E 3 OCT 1 303 6 OCT OCT A .
F 3 OCT 1 304 7 OCT OCT A .
G 4 C8E 1 305 1 C8E C8E A .
H 4 C8E 1 306 2 C8E C8E A .
I 5 HOH 1 401 1 HOH HOH A .
I 5 HOH 2 402 2 HOH HOH A .
I 5 HOH 3 403 3 HOH HOH A .
I 5 HOH 4 404 4 HOH HOH A .
I 5 HOH 5 405 5 HOH HOH A .
I 5 HOH 6 406 6 HOH HOH A .
I 5 HOH 7 407 7 HOH HOH A .
I 5 HOH 8 408 8 HOH HOH A .
I 5 HOH 9 409 9 HOH HOH A .
I 5 HOH 10 410 10 HOH HOH A .
I 5 HOH 11 411 11 HOH HOH A .
I 5 HOH 12 412 12 HOH HOH A .
I 5 HOH 13 413 13 HOH HOH A .
I 5 HOH 14 414 15 HOH HOH A .
I 5 HOH 15 415 16 HOH HOH A .
I 5 HOH 16 416 17 HOH HOH A .
I 5 HOH 17 417 18 HOH HOH A .
I 5 HOH 18 418 20 HOH HOH A .
I 5 HOH 19 419 22 HOH HOH A .
I 5 HOH 20 420 23 HOH HOH A .
I 5 HOH 21 421 25 HOH HOH A .
I 5 HOH 22 422 26 HOH HOH A .
I 5 HOH 23 423 28 HOH HOH A .
I 5 HOH 24 424 29 HOH HOH A .
I 5 HOH 25 425 30 HOH HOH A .
I 5 HOH 26 426 33 HOH HOH A .
I 5 HOH 27 427 34 HOH HOH A .
I 5 HOH 28 428 35 HOH HOH A .
I 5 HOH 29 429 37 HOH HOH A .
I 5 HOH 30 430 38 HOH HOH A .
I 5 HOH 31 431 39 HOH HOH A .
I 5 HOH 32 432 41 HOH HOH A .
I 5 HOH 33 433 42 HOH HOH A .
I 5 HOH 34 434 43 HOH HOH A .
I 5 HOH 35 435 44 HOH HOH A .
I 5 HOH 36 436 46 HOH HOH A .
I 5 HOH 37 437 47 HOH HOH A .
I 5 HOH 38 438 48 HOH HOH A .
I 5 HOH 39 439 49 HOH HOH A .
I 5 HOH 40 440 50 HOH HOH A .
I 5 HOH 41 441 51 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2014-06-11
2 'Structure model' 1 1 2014-09-24
3 'Structure model' 2 0 2020-07-29
4 'Structure model' 2 1 2023-09-20
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' Advisory
3 3 'Structure model' 'Atomic model'
4 3 'Structure model' 'Data collection'
5 3 'Structure model' 'Database references'
6 3 'Structure model' 'Derived calculations'
7 3 'Structure model' 'Structure summary'
8 4 'Structure model' Advisory
9 4 'Structure model' 'Data collection'
10 4 'Structure model' 'Database references'
11 4 'Structure model' 'Refinement description'
12 4 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' atom_site
2 3 'Structure model' chem_comp
3 3 'Structure model' database_PDB_caveat
4 3 'Structure model' entity
5 3 'Structure model' pdbx_branch_scheme
6 3 'Structure model' pdbx_chem_comp_identifier
7 3 'Structure model' pdbx_entity_branch
8 3 'Structure model' pdbx_entity_branch_descriptor
9 3 'Structure model' pdbx_entity_branch_link
10 3 'Structure model' pdbx_entity_branch_list
11 3 'Structure model' pdbx_entity_nonpoly
12 3 'Structure model' pdbx_nonpoly_scheme
13 3 'Structure model' pdbx_struct_assembly_gen
14 3 'Structure model' pdbx_unobs_or_zero_occ_residues
15 3 'Structure model' pdbx_validate_close_contact
16 3 'Structure model' struct_asym
17 3 'Structure model' struct_conn
18 3 'Structure model' struct_ref_seq_dif
19 3 'Structure model' struct_site
20 3 'Structure model' struct_site_gen
21 4 'Structure model' chem_comp
22 4 'Structure model' chem_comp_atom
23 4 'Structure model' chem_comp_bond
24 4 'Structure model' database_2
25 4 'Structure model' pdbx_initial_refinement_model
26 4 'Structure model' pdbx_unobs_or_zero_occ_residues
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_atom_site.B_iso_or_equiv'
2 3 'Structure model' '_atom_site.Cartn_x'
3 3 'Structure model' '_atom_site.Cartn_y'
4 3 'Structure model' '_atom_site.Cartn_z'
5 3 'Structure model' '_atom_site.auth_asym_id'
6 3 'Structure model' '_atom_site.auth_atom_id'
7 3 'Structure model' '_atom_site.auth_comp_id'
8 3 'Structure model' '_atom_site.auth_seq_id'
9 3 'Structure model' '_atom_site.label_asym_id'
10 3 'Structure model' '_atom_site.label_atom_id'
11 3 'Structure model' '_atom_site.label_comp_id'
12 3 'Structure model' '_atom_site.label_entity_id'
13 3 'Structure model' '_atom_site.occupancy'
14 3 'Structure model' '_atom_site.type_symbol'
15 3 'Structure model' '_chem_comp.name'
16 3 'Structure model' '_chem_comp.type'
17 3 'Structure model' '_entity.formula_weight'
18 3 'Structure model' '_entity.pdbx_description'
19 3 'Structure model' '_entity.pdbx_number_of_molecules'
20 3 'Structure model' '_entity.src_method'
21 3 'Structure model' '_entity.type'
22 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
23 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1'
24 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1'
25 3 'Structure model' '_struct_conn.pdbx_dist_value'
26 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
27 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
30 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
31 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
32 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
33 3 'Structure model' '_struct_ref_seq_dif.details'
34 4 'Structure model' '_chem_comp.pdbx_synonyms'
35 4 'Structure model' '_database_2.pdbx_DOI'
36 4 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls.id 1
_pdbx_refine_tls.details ?
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x 8.5390
_pdbx_refine_tls.origin_y 1.1350
_pdbx_refine_tls.origin_z 2.2370
_pdbx_refine_tls.T[1][1] 0.0320
_pdbx_refine_tls.T[2][2] 0.0246
_pdbx_refine_tls.T[3][3] 0.0652
_pdbx_refine_tls.T[1][2] 0.0056
_pdbx_refine_tls.T[1][3] -0.0146
_pdbx_refine_tls.T[2][3] 0.0057
_pdbx_refine_tls.L[1][1] 1.5074
_pdbx_refine_tls.L[2][2] 2.6115
_pdbx_refine_tls.L[3][3] 0.0460
_pdbx_refine_tls.L[1][2] 0.1857
_pdbx_refine_tls.L[1][3] 0.2489
_pdbx_refine_tls.L[2][3] 0.1413
_pdbx_refine_tls.S[1][1] -0.0189
_pdbx_refine_tls.S[2][2] 0.0087
_pdbx_refine_tls.S[3][3] 0.0102
_pdbx_refine_tls.S[1][2] -0.1019
_pdbx_refine_tls.S[1][3] 0.0291
_pdbx_refine_tls.S[2][3] 0.0265
_pdbx_refine_tls.S[2][1] 0.1214
_pdbx_refine_tls.S[3][1] 0.0003
_pdbx_refine_tls.S[3][2] -0.0166
#
_pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls_group.id 1
_pdbx_refine_tls_group.refine_tls_id 1
_pdbx_refine_tls_group.beg_auth_asym_id A
_pdbx_refine_tls_group.beg_auth_seq_id 1
_pdbx_refine_tls_group.end_auth_asym_id A
_pdbx_refine_tls_group.end_auth_seq_id 217
_pdbx_refine_tls_group.selection_details ?
_pdbx_refine_tls_group.beg_label_asym_id .
_pdbx_refine_tls_group.beg_label_seq_id .
_pdbx_refine_tls_group.end_label_asym_id .
_pdbx_refine_tls_group.end_label_seq_id .
_pdbx_refine_tls_group.selection ?
#
loop_
_software.pdbx_ordinal
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
1 REFMAC 5.7.0029 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement
http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ?
2 SCALA CCP4_3.3.20 2011/05/18 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling'
http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ?
3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction'
http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ?
4 MOSFLM . ? ? ? ? 'data reduction' ? ? ?
5 PHASER . ? ? ? ? phasing ? ? ?
#
_pdbx_validate_close_contact.id 1
_pdbx_validate_close_contact.PDB_model_num 1
_pdbx_validate_close_contact.auth_atom_id_1 O6A
_pdbx_validate_close_contact.auth_asym_id_1 B
_pdbx_validate_close_contact.auth_comp_id_1 ADA
_pdbx_validate_close_contact.auth_seq_id_1 3
_pdbx_validate_close_contact.PDB_ins_code_1 ?
_pdbx_validate_close_contact.label_alt_id_1 ?
_pdbx_validate_close_contact.auth_atom_id_2 O
_pdbx_validate_close_contact.auth_asym_id_2 A
_pdbx_validate_close_contact.auth_comp_id_2 HOH
_pdbx_validate_close_contact.auth_seq_id_2 441
_pdbx_validate_close_contact.PDB_ins_code_2 ?
_pdbx_validate_close_contact.label_alt_id_2 ?
_pdbx_validate_close_contact.dist 2.06
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ASN A 71 ? ? -173.80 -168.92
2 1 LYS A 144 ? ? 71.13 -56.26
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A THR 12 ? A THR 12
2 1 Y 1 A ALA 13 ? A ALA 13
3 1 Y 1 A GLN 14 ? A GLN 14
4 1 Y 1 A ALA 15 ? A ALA 15
5 1 Y 1 A SER 43 ? A SER 43
6 1 Y 1 A ALA 44 ? A ALA 44
7 1 Y 1 A ASP 45 ? A ASP 45
8 1 Y 1 A LYS 46 ? A LYS 46
9 1 Y 1 A THR 47 ? A THR 47
10 1 Y 1 A PRO 48 ? A PRO 48
11 1 Y 1 A ASN 49 ? A ASN 49
12 1 Y 1 A LYS 50 ? A LYS 50
13 1 Y 1 A PRO 51 ? A PRO 51
14 1 Y 1 A PHE 52 ? A PHE 52
15 1 Y 1 A ASN 53 ? A ASN 53
16 1 Y 1 A GLU 54 ? A GLU 54
17 1 Y 1 A GLN 55 ? A GLN 55
18 1 Y 1 A ASN 118 ? A ASN 118
19 1 Y 1 A SER 119 ? A SER 119
20 1 Y 1 A GLY 120 ? A GLY 120
21 1 Y 1 A ASN 121 ? A ASN 121
22 1 Y 1 A ILE 122 ? A ILE 122
23 1 Y 1 A GLY 123 ? A GLY 123
24 1 Y 1 A LYS 124 ? A LYS 124
25 1 Y 1 A ASP 125 ? A ASP 125
26 1 Y 1 A ASN 126 ? A ASN 126
27 1 Y 1 A THR 127 ? A THR 127
28 1 Y 1 A MET 128 ? A MET 128
29 1 Y 1 A ASP 129 ? A ASP 129
30 1 Y 1 A GLY 160 ? A GLY 160
31 1 Y 1 A LYS 161 ? A LYS 161
32 1 Y 1 A THR 162 ? A THR 162
33 1 Y 1 A ILE 163 ? A ILE 163
34 1 Y 1 A LEU 164 ? A LEU 164
35 1 Y 1 A SER 165 ? A SER 165
36 1 Y 1 A ASP 166 ? A ASP 166
37 1 Y 1 A ASN 167 ? A ASN 167
38 1 Y 1 A ASP 168 ? A ASP 168
39 1 Y 1 A ASP 169 ? A ASP 169
40 1 Y 1 A GLY 197 ? A GLY 197
41 1 Y 1 A SER 198 ? A SER 198
42 1 Y 1 A GLU 199 ? A GLU 199
43 1 Y 1 A THR 200 ? A THR 200
44 1 Y 1 A THR 201 ? A THR 201
45 1 Y 1 A ASP 202 ? A ASP 202
46 1 Y 1 A GLU 203 ? A GLU 203
47 1 Y 1 A HIS 218 ? A HIS 218
48 1 Y 1 A HIS 219 ? A HIS 219
49 1 Y 1 A HIS 220 ? A HIS 220
50 1 Y 1 A HIS 221 ? A HIS 221
51 1 Y 1 A HIS 222 ? A HIS 222
52 1 N 0 B ADA 1 ? B ADA ?
53 1 N 0 B ADA 2 ? B ADA ?
54 1 N 0 B ADA 3 ? B ADA ?
55 1 N 0 B ADA 4 ? B ADA ?
56 1 N 0 B ADA 5 ? B ADA ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ADA C1 C N S 1
ADA C2 C N R 2
ADA C3 C N S 3
ADA C4 C N R 4
ADA C5 C N S 5
ADA C6 C N N 6
ADA O1 O N N 7
ADA O2 O N N 8
ADA O3 O N N 9
ADA O4 O N N 10
ADA O5 O N N 11
ADA O6B O N N 12
ADA O6A O N N 13
ADA H1 H N N 14
ADA H2 H N N 15
ADA H3 H N N 16
ADA H4 H N N 17
ADA H5 H N N 18
ADA HO1 H N N 19
ADA HO2 H N N 20
ADA HO3 H N N 21
ADA HO4 H N N 22
ADA HO6B H N N 23
ALA N N N N 24
ALA CA C N S 25
ALA C C N N 26
ALA O O N N 27
ALA CB C N N 28
ALA OXT O N N 29
ALA H H N N 30
ALA H2 H N N 31
ALA HA H N N 32
ALA HB1 H N N 33
ALA HB2 H N N 34
ALA HB3 H N N 35
ALA HXT H N N 36
ARG N N N N 37
ARG CA C N S 38
ARG C C N N 39
ARG O O N N 40
ARG CB C N N 41
ARG CG C N N 42
ARG CD C N N 43
ARG NE N N N 44
ARG CZ C N N 45
ARG NH1 N N N 46
ARG NH2 N N N 47
ARG OXT O N N 48
ARG H H N N 49
ARG H2 H N N 50
ARG HA H N N 51
ARG HB2 H N N 52
ARG HB3 H N N 53
ARG HG2 H N N 54
ARG HG3 H N N 55
ARG HD2 H N N 56
ARG HD3 H N N 57
ARG HE H N N 58
ARG HH11 H N N 59
ARG HH12 H N N 60
ARG HH21 H N N 61
ARG HH22 H N N 62
ARG HXT H N N 63
ASN N N N N 64
ASN CA C N S 65
ASN C C N N 66
ASN O O N N 67
ASN CB C N N 68
ASN CG C N N 69
ASN OD1 O N N 70
ASN ND2 N N N 71
ASN OXT O N N 72
ASN H H N N 73
ASN H2 H N N 74
ASN HA H N N 75
ASN HB2 H N N 76
ASN HB3 H N N 77
ASN HD21 H N N 78
ASN HD22 H N N 79
ASN HXT H N N 80
ASP N N N N 81
ASP CA C N S 82
ASP C C N N 83
ASP O O N N 84
ASP CB C N N 85
ASP CG C N N 86
ASP OD1 O N N 87
ASP OD2 O N N 88
ASP OXT O N N 89
ASP H H N N 90
ASP H2 H N N 91
ASP HA H N N 92
ASP HB2 H N N 93
ASP HB3 H N N 94
ASP HD2 H N N 95
ASP HXT H N N 96
C8E C1 C N N 97
C8E C2 C N N 98
C8E C3 C N N 99
C8E C4 C N N 100
C8E C5 C N N 101
C8E C6 C N N 102
C8E C7 C N N 103
C8E C8 C N N 104
C8E O9 O N N 105
C8E C10 C N N 106
C8E C11 C N N 107
C8E O12 O N N 108
C8E C13 C N N 109
C8E C14 C N N 110
C8E O15 O N N 111
C8E C16 C N N 112
C8E C17 C N N 113
C8E O18 O N N 114
C8E C19 C N N 115
C8E C20 C N N 116
C8E O21 O N N 117
C8E H11 H N N 118
C8E H12 H N N 119
C8E H13 H N N 120
C8E H21 H N N 121
C8E H22 H N N 122
C8E H31 H N N 123
C8E H32 H N N 124
C8E H41 H N N 125
C8E H42 H N N 126
C8E H51 H N N 127
C8E H52 H N N 128
C8E H61 H N N 129
C8E H62 H N N 130
C8E H71 H N N 131
C8E H72 H N N 132
C8E H81 H N N 133
C8E H82 H N N 134
C8E H101 H N N 135
C8E H102 H N N 136
C8E H111 H N N 137
C8E H112 H N N 138
C8E H131 H N N 139
C8E H132 H N N 140
C8E H141 H N N 141
C8E H142 H N N 142
C8E H161 H N N 143
C8E H162 H N N 144
C8E H171 H N N 145
C8E H172 H N N 146
C8E H191 H N N 147
C8E H192 H N N 148
C8E H201 H N N 149
C8E H202 H N N 150
C8E HO2 H N N 151
GLN N N N N 152
GLN CA C N S 153
GLN C C N N 154
GLN O O N N 155
GLN CB C N N 156
GLN CG C N N 157
GLN CD C N N 158
GLN OE1 O N N 159
GLN NE2 N N N 160
GLN OXT O N N 161
GLN H H N N 162
GLN H2 H N N 163
GLN HA H N N 164
GLN HB2 H N N 165
GLN HB3 H N N 166
GLN HG2 H N N 167
GLN HG3 H N N 168
GLN HE21 H N N 169
GLN HE22 H N N 170
GLN HXT H N N 171
GLU N N N N 172
GLU CA C N S 173
GLU C C N N 174
GLU O O N N 175
GLU CB C N N 176
GLU CG C N N 177
GLU CD C N N 178
GLU OE1 O N N 179
GLU OE2 O N N 180
GLU OXT O N N 181
GLU H H N N 182
GLU H2 H N N 183
GLU HA H N N 184
GLU HB2 H N N 185
GLU HB3 H N N 186
GLU HG2 H N N 187
GLU HG3 H N N 188
GLU HE2 H N N 189
GLU HXT H N N 190
GLY N N N N 191
GLY CA C N N 192
GLY C C N N 193
GLY O O N N 194
GLY OXT O N N 195
GLY H H N N 196
GLY H2 H N N 197
GLY HA2 H N N 198
GLY HA3 H N N 199
GLY HXT H N N 200
HIS N N N N 201
HIS CA C N S 202
HIS C C N N 203
HIS O O N N 204
HIS CB C N N 205
HIS CG C Y N 206
HIS ND1 N Y N 207
HIS CD2 C Y N 208
HIS CE1 C Y N 209
HIS NE2 N Y N 210
HIS OXT O N N 211
HIS H H N N 212
HIS H2 H N N 213
HIS HA H N N 214
HIS HB2 H N N 215
HIS HB3 H N N 216
HIS HD1 H N N 217
HIS HD2 H N N 218
HIS HE1 H N N 219
HIS HE2 H N N 220
HIS HXT H N N 221
HOH O O N N 222
HOH H1 H N N 223
HOH H2 H N N 224
ILE N N N N 225
ILE CA C N S 226
ILE C C N N 227
ILE O O N N 228
ILE CB C N S 229
ILE CG1 C N N 230
ILE CG2 C N N 231
ILE CD1 C N N 232
ILE OXT O N N 233
ILE H H N N 234
ILE H2 H N N 235
ILE HA H N N 236
ILE HB H N N 237
ILE HG12 H N N 238
ILE HG13 H N N 239
ILE HG21 H N N 240
ILE HG22 H N N 241
ILE HG23 H N N 242
ILE HD11 H N N 243
ILE HD12 H N N 244
ILE HD13 H N N 245
ILE HXT H N N 246
LEU N N N N 247
LEU CA C N S 248
LEU C C N N 249
LEU O O N N 250
LEU CB C N N 251
LEU CG C N N 252
LEU CD1 C N N 253
LEU CD2 C N N 254
LEU OXT O N N 255
LEU H H N N 256
LEU H2 H N N 257
LEU HA H N N 258
LEU HB2 H N N 259
LEU HB3 H N N 260
LEU HG H N N 261
LEU HD11 H N N 262
LEU HD12 H N N 263
LEU HD13 H N N 264
LEU HD21 H N N 265
LEU HD22 H N N 266
LEU HD23 H N N 267
LEU HXT H N N 268
LYS N N N N 269
LYS CA C N S 270
LYS C C N N 271
LYS O O N N 272
LYS CB C N N 273
LYS CG C N N 274
LYS CD C N N 275
LYS CE C N N 276
LYS NZ N N N 277
LYS OXT O N N 278
LYS H H N N 279
LYS H2 H N N 280
LYS HA H N N 281
LYS HB2 H N N 282
LYS HB3 H N N 283
LYS HG2 H N N 284
LYS HG3 H N N 285
LYS HD2 H N N 286
LYS HD3 H N N 287
LYS HE2 H N N 288
LYS HE3 H N N 289
LYS HZ1 H N N 290
LYS HZ2 H N N 291
LYS HZ3 H N N 292
LYS HXT H N N 293
MET N N N N 294
MET CA C N S 295
MET C C N N 296
MET O O N N 297
MET CB C N N 298
MET CG C N N 299
MET SD S N N 300
MET CE C N N 301
MET OXT O N N 302
MET H H N N 303
MET H2 H N N 304
MET HA H N N 305
MET HB2 H N N 306
MET HB3 H N N 307
MET HG2 H N N 308
MET HG3 H N N 309
MET HE1 H N N 310
MET HE2 H N N 311
MET HE3 H N N 312
MET HXT H N N 313
OCT C1 C N N 314
OCT C2 C N N 315
OCT C3 C N N 316
OCT C4 C N N 317
OCT C5 C N N 318
OCT C6 C N N 319
OCT C7 C N N 320
OCT C8 C N N 321
OCT H11 H N N 322
OCT H12 H N N 323
OCT H13 H N N 324
OCT H21 H N N 325
OCT H22 H N N 326
OCT H31 H N N 327
OCT H32 H N N 328
OCT H41 H N N 329
OCT H42 H N N 330
OCT H51 H N N 331
OCT H52 H N N 332
OCT H61 H N N 333
OCT H62 H N N 334
OCT H71 H N N 335
OCT H72 H N N 336
OCT H81 H N N 337
OCT H82 H N N 338
OCT H83 H N N 339
PHE N N N N 340
PHE CA C N S 341
PHE C C N N 342
PHE O O N N 343
PHE CB C N N 344
PHE CG C Y N 345
PHE CD1 C Y N 346
PHE CD2 C Y N 347
PHE CE1 C Y N 348
PHE CE2 C Y N 349
PHE CZ C Y N 350
PHE OXT O N N 351
PHE H H N N 352
PHE H2 H N N 353
PHE HA H N N 354
PHE HB2 H N N 355
PHE HB3 H N N 356
PHE HD1 H N N 357
PHE HD2 H N N 358
PHE HE1 H N N 359
PHE HE2 H N N 360
PHE HZ H N N 361
PHE HXT H N N 362
PRO N N N N 363
PRO CA C N S 364
PRO C C N N 365
PRO O O N N 366
PRO CB C N N 367
PRO CG C N N 368
PRO CD C N N 369
PRO OXT O N N 370
PRO H H N N 371
PRO HA H N N 372
PRO HB2 H N N 373
PRO HB3 H N N 374
PRO HG2 H N N 375
PRO HG3 H N N 376
PRO HD2 H N N 377
PRO HD3 H N N 378
PRO HXT H N N 379
SER N N N N 380
SER CA C N S 381
SER C C N N 382
SER O O N N 383
SER CB C N N 384
SER OG O N N 385
SER OXT O N N 386
SER H H N N 387
SER H2 H N N 388
SER HA H N N 389
SER HB2 H N N 390
SER HB3 H N N 391
SER HG H N N 392
SER HXT H N N 393
THR N N N N 394
THR CA C N S 395
THR C C N N 396
THR O O N N 397
THR CB C N R 398
THR OG1 O N N 399
THR CG2 C N N 400
THR OXT O N N 401
THR H H N N 402
THR H2 H N N 403
THR HA H N N 404
THR HB H N N 405
THR HG1 H N N 406
THR HG21 H N N 407
THR HG22 H N N 408
THR HG23 H N N 409
THR HXT H N N 410
TRP N N N N 411
TRP CA C N S 412
TRP C C N N 413
TRP O O N N 414
TRP CB C N N 415
TRP CG C Y N 416
TRP CD1 C Y N 417
TRP CD2 C Y N 418
TRP NE1 N Y N 419
TRP CE2 C Y N 420
TRP CE3 C Y N 421
TRP CZ2 C Y N 422
TRP CZ3 C Y N 423
TRP CH2 C Y N 424
TRP OXT O N N 425
TRP H H N N 426
TRP H2 H N N 427
TRP HA H N N 428
TRP HB2 H N N 429
TRP HB3 H N N 430
TRP HD1 H N N 431
TRP HE1 H N N 432
TRP HE3 H N N 433
TRP HZ2 H N N 434
TRP HZ3 H N N 435
TRP HH2 H N N 436
TRP HXT H N N 437
TYR N N N N 438
TYR CA C N S 439
TYR C C N N 440
TYR O O N N 441
TYR CB C N N 442
TYR CG C Y N 443
TYR CD1 C Y N 444
TYR CD2 C Y N 445
TYR CE1 C Y N 446
TYR CE2 C Y N 447
TYR CZ C Y N 448
TYR OH O N N 449
TYR OXT O N N 450
TYR H H N N 451
TYR H2 H N N 452
TYR HA H N N 453
TYR HB2 H N N 454
TYR HB3 H N N 455
TYR HD1 H N N 456
TYR HD2 H N N 457
TYR HE1 H N N 458
TYR HE2 H N N 459
TYR HH H N N 460
TYR HXT H N N 461
VAL N N N N 462
VAL CA C N S 463
VAL C C N N 464
VAL O O N N 465
VAL CB C N N 466
VAL CG1 C N N 467
VAL CG2 C N N 468
VAL OXT O N N 469
VAL H H N N 470
VAL H2 H N N 471
VAL HA H N N 472
VAL HB H N N 473
VAL HG11 H N N 474
VAL HG12 H N N 475
VAL HG13 H N N 476
VAL HG21 H N N 477
VAL HG22 H N N 478
VAL HG23 H N N 479
VAL HXT H N N 480
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ADA C1 C2 sing N N 1
ADA C1 O1 sing N N 2
ADA C1 O5 sing N N 3
ADA C1 H1 sing N N 4
ADA C2 C3 sing N N 5
ADA C2 O2 sing N N 6
ADA C2 H2 sing N N 7
ADA C3 C4 sing N N 8
ADA C3 O3 sing N N 9
ADA C3 H3 sing N N 10
ADA C4 C5 sing N N 11
ADA C4 O4 sing N N 12
ADA C4 H4 sing N N 13
ADA C5 C6 sing N N 14
ADA C5 O5 sing N N 15
ADA C5 H5 sing N N 16
ADA C6 O6B sing N N 17
ADA C6 O6A doub N N 18
ADA O1 HO1 sing N N 19
ADA O2 HO2 sing N N 20
ADA O3 HO3 sing N N 21
ADA O4 HO4 sing N N 22
ADA O6B HO6B sing N N 23
ALA N CA sing N N 24
ALA N H sing N N 25
ALA N H2 sing N N 26
ALA CA C sing N N 27
ALA CA CB sing N N 28
ALA CA HA sing N N 29
ALA C O doub N N 30
ALA C OXT sing N N 31
ALA CB HB1 sing N N 32
ALA CB HB2 sing N N 33
ALA CB HB3 sing N N 34
ALA OXT HXT sing N N 35
ARG N CA sing N N 36
ARG N H sing N N 37
ARG N H2 sing N N 38
ARG CA C sing N N 39
ARG CA CB sing N N 40
ARG CA HA sing N N 41
ARG C O doub N N 42
ARG C OXT sing N N 43
ARG CB CG sing N N 44
ARG CB HB2 sing N N 45
ARG CB HB3 sing N N 46
ARG CG CD sing N N 47
ARG CG HG2 sing N N 48
ARG CG HG3 sing N N 49
ARG CD NE sing N N 50
ARG CD HD2 sing N N 51
ARG CD HD3 sing N N 52
ARG NE CZ sing N N 53
ARG NE HE sing N N 54
ARG CZ NH1 sing N N 55
ARG CZ NH2 doub N N 56
ARG NH1 HH11 sing N N 57
ARG NH1 HH12 sing N N 58
ARG NH2 HH21 sing N N 59
ARG NH2 HH22 sing N N 60
ARG OXT HXT sing N N 61
ASN N CA sing N N 62
ASN N H sing N N 63
ASN N H2 sing N N 64
ASN CA C sing N N 65
ASN CA CB sing N N 66
ASN CA HA sing N N 67
ASN C O doub N N 68
ASN C OXT sing N N 69
ASN CB CG sing N N 70
ASN CB HB2 sing N N 71
ASN CB HB3 sing N N 72
ASN CG OD1 doub N N 73
ASN CG ND2 sing N N 74
ASN ND2 HD21 sing N N 75
ASN ND2 HD22 sing N N 76
ASN OXT HXT sing N N 77
ASP N CA sing N N 78
ASP N H sing N N 79
ASP N H2 sing N N 80
ASP CA C sing N N 81
ASP CA CB sing N N 82
ASP CA HA sing N N 83
ASP C O doub N N 84
ASP C OXT sing N N 85
ASP CB CG sing N N 86
ASP CB HB2 sing N N 87
ASP CB HB3 sing N N 88
ASP CG OD1 doub N N 89
ASP CG OD2 sing N N 90
ASP OD2 HD2 sing N N 91
ASP OXT HXT sing N N 92
C8E C1 C2 sing N N 93
C8E C1 H11 sing N N 94
C8E C1 H12 sing N N 95
C8E C1 H13 sing N N 96
C8E C2 C3 sing N N 97
C8E C2 H21 sing N N 98
C8E C2 H22 sing N N 99
C8E C3 C4 sing N N 100
C8E C3 H31 sing N N 101
C8E C3 H32 sing N N 102
C8E C4 C5 sing N N 103
C8E C4 H41 sing N N 104
C8E C4 H42 sing N N 105
C8E C5 C6 sing N N 106
C8E C5 H51 sing N N 107
C8E C5 H52 sing N N 108
C8E C6 C7 sing N N 109
C8E C6 H61 sing N N 110
C8E C6 H62 sing N N 111
C8E C7 C8 sing N N 112
C8E C7 H71 sing N N 113
C8E C7 H72 sing N N 114
C8E C8 O9 sing N N 115
C8E C8 H81 sing N N 116
C8E C8 H82 sing N N 117
C8E O9 C10 sing N N 118
C8E C10 C11 sing N N 119
C8E C10 H101 sing N N 120
C8E C10 H102 sing N N 121
C8E C11 O12 sing N N 122
C8E C11 H111 sing N N 123
C8E C11 H112 sing N N 124
C8E O12 C13 sing N N 125
C8E C13 C14 sing N N 126
C8E C13 H131 sing N N 127
C8E C13 H132 sing N N 128
C8E C14 O15 sing N N 129
C8E C14 H141 sing N N 130
C8E C14 H142 sing N N 131
C8E O15 C16 sing N N 132
C8E C16 C17 sing N N 133
C8E C16 H161 sing N N 134
C8E C16 H162 sing N N 135
C8E C17 O18 sing N N 136
C8E C17 H171 sing N N 137
C8E C17 H172 sing N N 138
C8E O18 C19 sing N N 139
C8E C19 C20 sing N N 140
C8E C19 H191 sing N N 141
C8E C19 H192 sing N N 142
C8E C20 O21 sing N N 143
C8E C20 H201 sing N N 144
C8E C20 H202 sing N N 145
C8E O21 HO2 sing N N 146
GLN N CA sing N N 147
GLN N H sing N N 148
GLN N H2 sing N N 149
GLN CA C sing N N 150
GLN CA CB sing N N 151
GLN CA HA sing N N 152
GLN C O doub N N 153
GLN C OXT sing N N 154
GLN CB CG sing N N 155
GLN CB HB2 sing N N 156
GLN CB HB3 sing N N 157
GLN CG CD sing N N 158
GLN CG HG2 sing N N 159
GLN CG HG3 sing N N 160
GLN CD OE1 doub N N 161
GLN CD NE2 sing N N 162
GLN NE2 HE21 sing N N 163
GLN NE2 HE22 sing N N 164
GLN OXT HXT sing N N 165
GLU N CA sing N N 166
GLU N H sing N N 167
GLU N H2 sing N N 168
GLU CA C sing N N 169
GLU CA CB sing N N 170
GLU CA HA sing N N 171
GLU C O doub N N 172
GLU C OXT sing N N 173
GLU CB CG sing N N 174
GLU CB HB2 sing N N 175
GLU CB HB3 sing N N 176
GLU CG CD sing N N 177
GLU CG HG2 sing N N 178
GLU CG HG3 sing N N 179
GLU CD OE1 doub N N 180
GLU CD OE2 sing N N 181
GLU OE2 HE2 sing N N 182
GLU OXT HXT sing N N 183
GLY N CA sing N N 184
GLY N H sing N N 185
GLY N H2 sing N N 186
GLY CA C sing N N 187
GLY CA HA2 sing N N 188
GLY CA HA3 sing N N 189
GLY C O doub N N 190
GLY C OXT sing N N 191
GLY OXT HXT sing N N 192
HIS N CA sing N N 193
HIS N H sing N N 194
HIS N H2 sing N N 195
HIS CA C sing N N 196
HIS CA CB sing N N 197
HIS CA HA sing N N 198
HIS C O doub N N 199
HIS C OXT sing N N 200
HIS CB CG sing N N 201
HIS CB HB2 sing N N 202
HIS CB HB3 sing N N 203
HIS CG ND1 sing Y N 204
HIS CG CD2 doub Y N 205
HIS ND1 CE1 doub Y N 206
HIS ND1 HD1 sing N N 207
HIS CD2 NE2 sing Y N 208
HIS CD2 HD2 sing N N 209
HIS CE1 NE2 sing Y N 210
HIS CE1 HE1 sing N N 211
HIS NE2 HE2 sing N N 212
HIS OXT HXT sing N N 213
HOH O H1 sing N N 214
HOH O H2 sing N N 215
ILE N CA sing N N 216
ILE N H sing N N 217
ILE N H2 sing N N 218
ILE CA C sing N N 219
ILE CA CB sing N N 220
ILE CA HA sing N N 221
ILE C O doub N N 222
ILE C OXT sing N N 223
ILE CB CG1 sing N N 224
ILE CB CG2 sing N N 225
ILE CB HB sing N N 226
ILE CG1 CD1 sing N N 227
ILE CG1 HG12 sing N N 228
ILE CG1 HG13 sing N N 229
ILE CG2 HG21 sing N N 230
ILE CG2 HG22 sing N N 231
ILE CG2 HG23 sing N N 232
ILE CD1 HD11 sing N N 233
ILE CD1 HD12 sing N N 234
ILE CD1 HD13 sing N N 235
ILE OXT HXT sing N N 236
LEU N CA sing N N 237
LEU N H sing N N 238
LEU N H2 sing N N 239
LEU CA C sing N N 240
LEU CA CB sing N N 241
LEU CA HA sing N N 242
LEU C O doub N N 243
LEU C OXT sing N N 244
LEU CB CG sing N N 245
LEU CB HB2 sing N N 246
LEU CB HB3 sing N N 247
LEU CG CD1 sing N N 248
LEU CG CD2 sing N N 249
LEU CG HG sing N N 250
LEU CD1 HD11 sing N N 251
LEU CD1 HD12 sing N N 252
LEU CD1 HD13 sing N N 253
LEU CD2 HD21 sing N N 254
LEU CD2 HD22 sing N N 255
LEU CD2 HD23 sing N N 256
LEU OXT HXT sing N N 257
LYS N CA sing N N 258
LYS N H sing N N 259
LYS N H2 sing N N 260
LYS CA C sing N N 261
LYS CA CB sing N N 262
LYS CA HA sing N N 263
LYS C O doub N N 264
LYS C OXT sing N N 265
LYS CB CG sing N N 266
LYS CB HB2 sing N N 267
LYS CB HB3 sing N N 268
LYS CG CD sing N N 269
LYS CG HG2 sing N N 270
LYS CG HG3 sing N N 271
LYS CD CE sing N N 272
LYS CD HD2 sing N N 273
LYS CD HD3 sing N N 274
LYS CE NZ sing N N 275
LYS CE HE2 sing N N 276
LYS CE HE3 sing N N 277
LYS NZ HZ1 sing N N 278
LYS NZ HZ2 sing N N 279
LYS NZ HZ3 sing N N 280
LYS OXT HXT sing N N 281
MET N CA sing N N 282
MET N H sing N N 283
MET N H2 sing N N 284
MET CA C sing N N 285
MET CA CB sing N N 286
MET CA HA sing N N 287
MET C O doub N N 288
MET C OXT sing N N 289
MET CB CG sing N N 290
MET CB HB2 sing N N 291
MET CB HB3 sing N N 292
MET CG SD sing N N 293
MET CG HG2 sing N N 294
MET CG HG3 sing N N 295
MET SD CE sing N N 296
MET CE HE1 sing N N 297
MET CE HE2 sing N N 298
MET CE HE3 sing N N 299
MET OXT HXT sing N N 300
OCT C1 C2 sing N N 301
OCT C1 H11 sing N N 302
OCT C1 H12 sing N N 303
OCT C1 H13 sing N N 304
OCT C2 C3 sing N N 305
OCT C2 H21 sing N N 306
OCT C2 H22 sing N N 307
OCT C3 C4 sing N N 308
OCT C3 H31 sing N N 309
OCT C3 H32 sing N N 310
OCT C4 C5 sing N N 311
OCT C4 H41 sing N N 312
OCT C4 H42 sing N N 313
OCT C5 C6 sing N N 314
OCT C5 H51 sing N N 315
OCT C5 H52 sing N N 316
OCT C6 C7 sing N N 317
OCT C6 H61 sing N N 318
OCT C6 H62 sing N N 319
OCT C7 C8 sing N N 320
OCT C7 H71 sing N N 321
OCT C7 H72 sing N N 322
OCT C8 H81 sing N N 323
OCT C8 H82 sing N N 324
OCT C8 H83 sing N N 325
PHE N CA sing N N 326
PHE N H sing N N 327
PHE N H2 sing N N 328
PHE CA C sing N N 329
PHE CA CB sing N N 330
PHE CA HA sing N N 331
PHE C O doub N N 332
PHE C OXT sing N N 333
PHE CB CG sing N N 334
PHE CB HB2 sing N N 335
PHE CB HB3 sing N N 336
PHE CG CD1 doub Y N 337
PHE CG CD2 sing Y N 338
PHE CD1 CE1 sing Y N 339
PHE CD1 HD1 sing N N 340
PHE CD2 CE2 doub Y N 341
PHE CD2 HD2 sing N N 342
PHE CE1 CZ doub Y N 343
PHE CE1 HE1 sing N N 344
PHE CE2 CZ sing Y N 345
PHE CE2 HE2 sing N N 346
PHE CZ HZ sing N N 347
PHE OXT HXT sing N N 348
PRO N CA sing N N 349
PRO N CD sing N N 350
PRO N H sing N N 351
PRO CA C sing N N 352
PRO CA CB sing N N 353
PRO CA HA sing N N 354
PRO C O doub N N 355
PRO C OXT sing N N 356
PRO CB CG sing N N 357
PRO CB HB2 sing N N 358
PRO CB HB3 sing N N 359
PRO CG CD sing N N 360
PRO CG HG2 sing N N 361
PRO CG HG3 sing N N 362
PRO CD HD2 sing N N 363
PRO CD HD3 sing N N 364
PRO OXT HXT sing N N 365
SER N CA sing N N 366
SER N H sing N N 367
SER N H2 sing N N 368
SER CA C sing N N 369
SER CA CB sing N N 370
SER CA HA sing N N 371
SER C O doub N N 372
SER C OXT sing N N 373
SER CB OG sing N N 374
SER CB HB2 sing N N 375
SER CB HB3 sing N N 376
SER OG HG sing N N 377
SER OXT HXT sing N N 378
THR N CA sing N N 379
THR N H sing N N 380
THR N H2 sing N N 381
THR CA C sing N N 382
THR CA CB sing N N 383
THR CA HA sing N N 384
THR C O doub N N 385
THR C OXT sing N N 386
THR CB OG1 sing N N 387
THR CB CG2 sing N N 388
THR CB HB sing N N 389
THR OG1 HG1 sing N N 390
THR CG2 HG21 sing N N 391
THR CG2 HG22 sing N N 392
THR CG2 HG23 sing N N 393
THR OXT HXT sing N N 394
TRP N CA sing N N 395
TRP N H sing N N 396
TRP N H2 sing N N 397
TRP CA C sing N N 398
TRP CA CB sing N N 399
TRP CA HA sing N N 400
TRP C O doub N N 401
TRP C OXT sing N N 402
TRP CB CG sing N N 403
TRP CB HB2 sing N N 404
TRP CB HB3 sing N N 405
TRP CG CD1 doub Y N 406
TRP CG CD2 sing Y N 407
TRP CD1 NE1 sing Y N 408
TRP CD1 HD1 sing N N 409
TRP CD2 CE2 doub Y N 410
TRP CD2 CE3 sing Y N 411
TRP NE1 CE2 sing Y N 412
TRP NE1 HE1 sing N N 413
TRP CE2 CZ2 sing Y N 414
TRP CE3 CZ3 doub Y N 415
TRP CE3 HE3 sing N N 416
TRP CZ2 CH2 doub Y N 417
TRP CZ2 HZ2 sing N N 418
TRP CZ3 CH2 sing Y N 419
TRP CZ3 HZ3 sing N N 420
TRP CH2 HH2 sing N N 421
TRP OXT HXT sing N N 422
TYR N CA sing N N 423
TYR N H sing N N 424
TYR N H2 sing N N 425
TYR CA C sing N N 426
TYR CA CB sing N N 427
TYR CA HA sing N N 428
TYR C O doub N N 429
TYR C OXT sing N N 430
TYR CB CG sing N N 431
TYR CB HB2 sing N N 432
TYR CB HB3 sing N N 433
TYR CG CD1 doub Y N 434
TYR CG CD2 sing Y N 435
TYR CD1 CE1 sing Y N 436
TYR CD1 HD1 sing N N 437
TYR CD2 CE2 doub Y N 438
TYR CD2 HD2 sing N N 439
TYR CE1 CZ doub Y N 440
TYR CE1 HE1 sing N N 441
TYR CE2 CZ sing Y N 442
TYR CE2 HE2 sing N N 443
TYR CZ OH sing N N 444
TYR OH HH sing N N 445
TYR OXT HXT sing N N 446
VAL N CA sing N N 447
VAL N H sing N N 448
VAL N H2 sing N N 449
VAL CA C sing N N 450
VAL CA CB sing N N 451
VAL CA HA sing N N 452
VAL C O doub N N 453
VAL C OXT sing N N 454
VAL CB CG1 sing N N 455
VAL CB CG2 sing N N 456
VAL CB HB sing N N 457
VAL CG1 HG11 sing N N 458
VAL CG1 HG12 sing N N 459
VAL CG1 HG13 sing N N 460
VAL CG2 HG21 sing N N 461
VAL CG2 HG22 sing N N 462
VAL CG2 HG23 sing N N 463
VAL OXT HXT sing N N 464
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 ADA 1 B ADA 1 X ADA 400 n
B 2 ADA 2 B ADA 2 X ADA 401 n
B 2 ADA 3 B ADA 3 X ADA 402 n
B 2 ADA 4 B ADA 4 X ADA 403 n
B 2 ADA 5 B ADA 5 X ADA 404 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ADA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpAa
ADA 'COMMON NAME' GMML 1.0 'a-D-galactopyranuronic acid'
ADA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpA
ADA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalA
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGalpAa1-4DGalpAa1-4DGalpAa1-4DGalpAa1-4DGalpAa1-ROH 'Glycam Condensed Sequence'
GMML 1.0
2 2 'WURCS=2.0/1,5,4/[a2112A-1a_1-5]/1-1-1-1-1/a4-b1_b4-c1_c4-d1_d4-e1' WURCS
PDB2Glycan 1.1.0
3 2 '[][a-D-GalpA]{[(4+1)][a-D-GalpA]{[(4+1)][a-D-GalpA]{[(4+1)][a-D-GalpA]{[(4+1)][a-D-GalpA]{}}}}}' LINUCS
PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 ADA C1 O1 1 ADA O4 HO4 sing ?
2 2 3 ADA C1 O1 2 ADA O4 HO4 sing ?
3 2 4 ADA C1 O1 3 ADA O4 HO4 sing ?
4 2 5 ADA C1 O1 4 ADA O4 HO4 sing ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 ADA 1 n
2 ADA 2 n
2 ADA 3 n
2 ADA 4 n
2 ADA 5 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 N-OCTANE OCT
4 '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' C8E
5 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 4FQE
_pdbx_initial_refinement_model.details 'PDB ENTRY 4FQE'
#