data_4PRU # _entry.id 4PRU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PRU pdb_00004pru 10.2210/pdb4pru/pdb RCSB RCSB085141 ? ? WWPDB D_1000085141 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4N0J 'Crystal structure of hen egg white lysozyme in complex with sclx4 at 1.9 A resolution' unspecified PDB 4PRQ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4PRU _pdbx_database_status.recvd_initial_deposition_date 2014-03-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'McGovern, R.E.' 1 'Lyons, J.A.' 2 'Crowley, P.B.' 3 # _citation.id primary _citation.title 'Structural study of a small molecule receptor bound to dimethyllysine in lysozyme.' _citation.journal_abbrev 'Chem Sci' _citation.journal_volume 6 _citation.page_first 442 _citation.page_last 449 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-6520 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25530835 _citation.pdbx_database_id_DOI 10.1039/C4SC02383H # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McGovern, R.E.' 1 ? primary 'Snarr, B.D.' 2 ? primary 'Lyons, J.A.' 3 ? primary 'McFarlane, J.' 4 ? primary 'Whiting, A.L.' 5 ? primary 'Paci, I.' 6 ? primary 'Hof, F.' 7 ? primary 'Crowley, P.B.' 8 ? # _cell.entry_id 4PRU _cell.length_a 46.040 _cell.length_b 30.280 _cell.length_c 95.010 _cell.angle_alpha 90.00 _cell.angle_beta 96.62 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4PRU _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lysozyme C' 14521.488 2 3.2.1.17 ? ? ? 2 non-polymer syn ;25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid ; 744.741 4 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 97 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C, Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(DM0)VFGRCELAAAM(MLY)RHGLDNYRGYSLGNWVCAA(MLY)FESNFNTQATNRNTDGSTDYGILQINSRWWCNDGR TPGSRNLCNIPCSALLSSDITASVNCA(MLY)(MLY)IVSDGNGMNAWVAWRNRC(MLY)GTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DM0 n 1 2 VAL n 1 3 PHE n 1 4 GLY n 1 5 ARG n 1 6 CYS n 1 7 GLU n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 ALA n 1 12 MET n 1 13 MLY n 1 14 ARG n 1 15 HIS n 1 16 GLY n 1 17 LEU n 1 18 ASP n 1 19 ASN n 1 20 TYR n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 SER n 1 25 LEU n 1 26 GLY n 1 27 ASN n 1 28 TRP n 1 29 VAL n 1 30 CYS n 1 31 ALA n 1 32 ALA n 1 33 MLY n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 ASN n 1 38 PHE n 1 39 ASN n 1 40 THR n 1 41 GLN n 1 42 ALA n 1 43 THR n 1 44 ASN n 1 45 ARG n 1 46 ASN n 1 47 THR n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 ASP n 1 53 TYR n 1 54 GLY n 1 55 ILE n 1 56 LEU n 1 57 GLN n 1 58 ILE n 1 59 ASN n 1 60 SER n 1 61 ARG n 1 62 TRP n 1 63 TRP n 1 64 CYS n 1 65 ASN n 1 66 ASP n 1 67 GLY n 1 68 ARG n 1 69 THR n 1 70 PRO n 1 71 GLY n 1 72 SER n 1 73 ARG n 1 74 ASN n 1 75 LEU n 1 76 CYS n 1 77 ASN n 1 78 ILE n 1 79 PRO n 1 80 CYS n 1 81 SER n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 SER n 1 86 SER n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ALA n 1 91 SER n 1 92 VAL n 1 93 ASN n 1 94 CYS n 1 95 ALA n 1 96 MLY n 1 97 MLY n 1 98 ILE n 1 99 VAL n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 ASN n 1 104 GLY n 1 105 MET n 1 106 ASN n 1 107 ALA n 1 108 TRP n 1 109 VAL n 1 110 ALA n 1 111 TRP n 1 112 ARG n 1 113 ASN n 1 114 ARG n 1 115 CYS n 1 116 MLY n 1 117 GLY n 1 118 THR n 1 119 ASP n 1 120 VAL n 1 121 GLN n 1 122 ALA n 1 123 TRP n 1 124 ILE n 1 125 ARG n 1 126 GLY n 1 127 CYS n 1 128 ARG n 1 129 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name bantam,chickens _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4PRU A 1 ? 129 ? P00698 19 ? 147 ? 1 129 2 1 4PRU B 1 ? 129 ? P00698 19 ? 147 ? 1 129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DM0 'L-peptide linking' n N~2~,N~2~,N~6~,N~6~-tetramethyl-L-lysine ? 'C10 H22 N2 O2' 202.294 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 T3Y non-polymer . ;25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid ; '5,11,17,23-tetra-sulphonato-calix[4]arene-25,26,27,28-tetrol' 'C28 H24 O16 S4' 744.741 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4PRU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 45.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pdbx_details ;18 % PEG 8000 100 mM MAGNESIUM CHLORIDE, 50 mM SODIUM CHLORIDE, 50 mM SODIUM CACODYLATE PH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 293.15 K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-09-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03319 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.03319 # _reflns.entry_id 4PRU _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.41 _reflns.d_resolution_high 2.20 _reflns.number_obs 13557 _reflns.number_all 13612 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.156 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.9 _reflns.B_iso_Wilson_estimate 28.155 _reflns.pdbx_redundancy 3.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.26 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs 0.734 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 967 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4PRU _refine.ls_number_reflns_obs 12880 _refine.ls_number_reflns_all 13557 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.41 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.39 _refine.ls_R_factor_obs 0.18288 _refine.ls_R_factor_all 0.349 _refine.ls_R_factor_R_work 0.18004 _refine.ls_R_factor_R_free 0.23520 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 670 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.917 _refine.B_iso_mean 28.301 _refine.aniso_B[1][1] -0.31 _refine.aniso_B[2][2] -0.34 _refine.aniso_B[3][3] 0.61 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.20 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 4pqr _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.329 _refine.pdbx_overall_ESU_R_Free 0.225 _refine.overall_SU_ML 0.156 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.130 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2030 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 204 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 2331 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 39.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.013 0.020 ? 2307 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.047 0.020 ? 8 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.525 1.844 ? 3185 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.385 3.000 ? 16 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.539 5.000 ? 260 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.001 23.069 ? 101 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.661 15.000 ? 286 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 17.237 15.000 ? 22 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.109 0.200 ? 322 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.020 ? 1760 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.number_reflns_R_work 898 _refine_ls_shell.R_factor_R_work 0.236 _refine_ls_shell.percent_reflns_obs 98.65 _refine_ls_shell.R_factor_R_free 0.339 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4PRU _struct.title 'Crystal structure of dimethyllysine hen egg-white lysozyme in complex with sclx4 at 2.2 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PRU _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'HYDROLASE(O-GLYCOSYL), HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 4 ? HIS A 15 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P2 2 ASN A 19 ? TYR A 23 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P3 3 SER A 24 ? ASN A 37 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P4 4 PRO A 79 ? SER A 85 ? PRO A 79 SER A 85 5 ? 7 HELX_P HELX_P5 5 ILE A 88 ? ASP A 101 ? ILE A 88 ASP A 101 1 ? 14 HELX_P HELX_P6 6 TRP A 108 ? CYS A 115 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P7 7 ASP A 119 ? ILE A 124 ? ASP A 119 ILE A 124 5 ? 6 HELX_P HELX_P8 8 GLY B 4 ? HIS B 15 ? GLY B 4 HIS B 15 1 ? 12 HELX_P HELX_P9 9 ASN B 19 ? TYR B 23 ? ASN B 19 TYR B 23 5 ? 5 HELX_P HELX_P10 10 SER B 24 ? ASN B 37 ? SER B 24 ASN B 37 1 ? 14 HELX_P HELX_P11 11 PRO B 79 ? SER B 85 ? PRO B 79 SER B 85 5 ? 7 HELX_P HELX_P12 12 ILE B 88 ? GLY B 102 ? ILE B 88 GLY B 102 1 ? 15 HELX_P HELX_P13 13 GLY B 104 ? ALA B 107 ? GLY B 104 ALA B 107 5 ? 4 HELX_P HELX_P14 14 TRP B 108 ? CYS B 115 ? TRP B 108 CYS B 115 1 ? 8 HELX_P HELX_P15 15 ASP B 119 ? ILE B 124 ? ASP B 119 ILE B 124 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf4 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.068 ? ? disulf5 disulf ? ? B CYS 6 SG ? ? ? 1_555 B CYS 127 SG ? ? B CYS 6 B CYS 127 1_555 ? ? ? ? ? ? ? 2.073 ? ? disulf6 disulf ? ? B CYS 30 SG ? ? ? 1_555 B CYS 115 SG ? ? B CYS 30 B CYS 115 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf7 disulf ? ? B CYS 64 SG ? ? ? 1_555 B CYS 80 SG A ? B CYS 64 B CYS 80 1_555 ? ? ? ? ? ? ? 2.069 ? ? disulf8 disulf ? ? B CYS 64 SG ? ? ? 1_555 B CYS 80 SG B ? B CYS 64 B CYS 80 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf9 disulf ? ? B CYS 76 SG ? ? ? 1_555 B CYS 94 SG ? ? B CYS 76 B CYS 94 1_555 ? ? ? ? ? ? ? 2.076 ? ? covale1 covale both ? A DM0 1 C ? ? ? 1_555 A VAL 2 N ? ? A DM0 1 A VAL 2 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale2 covale both ? A MET 12 C ? ? ? 1_555 A MLY 13 N ? ? A MET 12 A MLY 13 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A MLY 13 C ? ? ? 1_555 A ARG 14 N ? ? A MLY 13 A ARG 14 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A ALA 32 C ? ? ? 1_555 A MLY 33 N ? ? A ALA 32 A MLY 33 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale5 covale both ? A MLY 33 C ? ? ? 1_555 A PHE 34 N ? ? A MLY 33 A PHE 34 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A ALA 95 C ? ? ? 1_555 A MLY 96 N ? ? A ALA 95 A MLY 96 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A MLY 96 C ? ? ? 1_555 A MLY 97 N ? ? A MLY 96 A MLY 97 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? A MLY 97 C ? ? ? 1_555 A ILE 98 N ? ? A MLY 97 A ILE 98 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale9 covale both ? A CYS 115 C ? ? ? 1_555 A MLY 116 N ? ? A CYS 115 A MLY 116 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale10 covale both ? A MLY 116 C ? ? ? 1_555 A GLY 117 N ? ? A MLY 116 A GLY 117 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale11 covale both ? B DM0 1 C ? ? ? 1_555 B VAL 2 N ? ? B DM0 1 B VAL 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? B MET 12 C ? ? ? 1_555 B MLY 13 N ? ? B MET 12 B MLY 13 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale13 covale both ? B MLY 13 C ? ? ? 1_555 B ARG 14 N ? ? B MLY 13 B ARG 14 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale14 covale both ? B ALA 32 C ? ? ? 1_555 B MLY 33 N ? ? B ALA 32 B MLY 33 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale15 covale both ? B MLY 33 C ? ? ? 1_555 B PHE 34 N ? ? B MLY 33 B PHE 34 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale16 covale both ? B ALA 95 C ? ? ? 1_555 B MLY 96 N ? ? B ALA 95 B MLY 96 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale17 covale both ? B MLY 96 C ? ? ? 1_555 B MLY 97 N ? ? B MLY 96 B MLY 97 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale18 covale both ? B MLY 97 C ? ? ? 1_555 B ILE 98 N ? ? B MLY 97 B ILE 98 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale19 covale both ? B CYS 115 C ? ? ? 1_555 B MLY 116 N ? ? B CYS 115 B MLY 116 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale20 covale both ? B MLY 116 C ? ? ? 1_555 B GLY 117 N ? ? B MLY 116 B GLY 117 1_555 ? ? ? ? ? ? ? 1.334 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 101 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 101 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 102 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 102 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -9.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 43 ? ARG A 45 ? THR A 43 ARG A 45 A 2 THR A 51 ? TYR A 53 ? THR A 51 TYR A 53 A 3 ILE A 58 ? ASN A 59 ? ILE A 58 ASN A 59 B 1 THR B 43 ? ARG B 45 ? THR B 43 ARG B 45 B 2 THR B 51 ? TYR B 53 ? THR B 51 TYR B 53 B 3 ILE B 58 ? ASN B 59 ? ILE B 58 ASN B 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 44 ? N ASN A 44 O ASP A 52 ? O ASP A 52 A 2 3 N TYR A 53 ? N TYR A 53 O ILE A 58 ? O ILE A 58 B 1 2 N ASN B 44 ? N ASN B 44 O ASP B 52 ? O ASP B 52 B 2 3 N TYR B 53 ? N TYR B 53 O ILE B 58 ? O ILE B 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A T3Y 201 ? 16 'BINDING SITE FOR RESIDUE T3Y A 201' AC2 Software A T3Y 202 ? 11 'BINDING SITE FOR RESIDUE T3Y A 202' AC3 Software A GOL 203 ? 7 'BINDING SITE FOR RESIDUE GOL A 203' AC4 Software A GOL 204 ? 6 'BINDING SITE FOR RESIDUE GOL A 204' AC5 Software B T3Y 201 ? 19 'BINDING SITE FOR RESIDUE T3Y B 201' AC6 Software B T3Y 202 ? 11 'BINDING SITE FOR RESIDUE T3Y B 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 TYR A 23 ? TYR A 23 . ? 1_555 ? 2 AC1 16 ASN A 106 ? ASN A 106 . ? 1_555 ? 3 AC1 16 TRP A 111 ? TRP A 111 . ? 1_555 ? 4 AC1 16 ARG A 112 ? ARG A 112 . ? 1_555 ? 5 AC1 16 MLY A 116 ? MLY A 116 . ? 1_555 ? 6 AC1 16 GLY A 117 ? GLY A 117 . ? 1_555 ? 7 AC1 16 GOL E . ? GOL A 203 . ? 1_555 ? 8 AC1 16 HOH I . ? HOH A 310 . ? 1_555 ? 9 AC1 16 HOH I . ? HOH A 327 . ? 1_555 ? 10 AC1 16 HOH I . ? HOH A 347 . ? 1_555 ? 11 AC1 16 ARG B 5 ? ARG B 5 . ? 1_565 ? 12 AC1 16 MLY B 33 ? MLY B 33 . ? 1_565 ? 13 AC1 16 PHE B 38 ? PHE B 38 . ? 1_565 ? 14 AC1 16 PRO B 70 ? PRO B 70 . ? 1_465 ? 15 AC1 16 GLY B 71 ? GLY B 71 . ? 1_465 ? 16 AC1 16 TRP B 123 ? TRP B 123 . ? 1_565 ? 17 AC2 11 DM0 A 1 ? DM0 A 1 . ? 1_555 ? 18 AC2 11 PHE A 3 ? PHE A 3 . ? 1_555 ? 19 AC2 11 GLU A 7 ? GLU A 7 . ? 1_555 ? 20 AC2 11 ALA A 10 ? ALA A 10 . ? 1_555 ? 21 AC2 11 ALA A 11 ? ALA A 11 . ? 1_555 ? 22 AC2 11 ARG A 14 ? ARG A 14 . ? 1_555 ? 23 AC2 11 HIS A 15 ? HIS A 15 . ? 1_555 ? 24 AC2 11 ARG A 128 ? ARG A 128 . ? 1_555 ? 25 AC2 11 HOH I . ? HOH A 306 . ? 1_555 ? 26 AC2 11 HOH I . ? HOH A 340 . ? 1_555 ? 27 AC2 11 HOH I . ? HOH A 346 . ? 1_555 ? 28 AC3 7 ASN A 27 ? ASN A 27 . ? 1_555 ? 29 AC3 7 CYS A 115 ? CYS A 115 . ? 1_555 ? 30 AC3 7 GLY A 117 ? GLY A 117 . ? 1_555 ? 31 AC3 7 THR A 118 ? THR A 118 . ? 1_555 ? 32 AC3 7 VAL A 120 ? VAL A 120 . ? 1_555 ? 33 AC3 7 T3Y C . ? T3Y A 201 . ? 1_555 ? 34 AC3 7 ARG B 114 ? ARG B 114 . ? 1_565 ? 35 AC4 6 PHE A 34 ? PHE A 34 . ? 1_555 ? 36 AC4 6 ARG A 114 ? ARG A 114 . ? 1_555 ? 37 AC4 6 THR A 118 ? THR A 118 . ? 1_555 ? 38 AC4 6 ASP A 119 ? ASP A 119 . ? 1_555 ? 39 AC4 6 TRP A 123 ? TRP A 123 . ? 1_555 ? 40 AC4 6 T3Y G . ? T3Y B 201 . ? 1_555 ? 41 AC5 19 ARG A 5 ? ARG A 5 . ? 1_555 ? 42 AC5 19 MLY A 33 ? MLY A 33 . ? 1_555 ? 43 AC5 19 GLY A 71 ? GLY A 71 . ? 1_655 ? 44 AC5 19 SER A 72 ? SER A 72 . ? 1_655 ? 45 AC5 19 ARG A 73 ? ARG A 73 . ? 1_655 ? 46 AC5 19 TRP A 123 ? TRP A 123 . ? 1_555 ? 47 AC5 19 GOL F . ? GOL A 204 . ? 1_555 ? 48 AC5 19 HOH I . ? HOH A 312 . ? 1_555 ? 49 AC5 19 ASN B 106 ? ASN B 106 . ? 1_555 ? 50 AC5 19 TRP B 111 ? TRP B 111 . ? 1_555 ? 51 AC5 19 ARG B 112 ? ARG B 112 . ? 1_555 ? 52 AC5 19 MLY B 116 ? MLY B 116 . ? 1_555 ? 53 AC5 19 GLY B 117 ? GLY B 117 . ? 1_555 ? 54 AC5 19 HOH J . ? HOH B 303 . ? 1_555 ? 55 AC5 19 HOH J . ? HOH B 304 . ? 1_555 ? 56 AC5 19 HOH J . ? HOH B 321 . ? 1_555 ? 57 AC5 19 HOH J . ? HOH B 327 . ? 1_555 ? 58 AC5 19 HOH J . ? HOH B 333 . ? 1_555 ? 59 AC5 19 HOH J . ? HOH B 337 . ? 1_555 ? 60 AC6 11 DM0 B 1 ? DM0 B 1 . ? 1_555 ? 61 AC6 11 PHE B 3 ? PHE B 3 . ? 1_555 ? 62 AC6 11 GLU B 7 ? GLU B 7 . ? 1_555 ? 63 AC6 11 ALA B 10 ? ALA B 10 . ? 1_555 ? 64 AC6 11 ALA B 11 ? ALA B 11 . ? 1_555 ? 65 AC6 11 ARG B 14 ? ARG B 14 . ? 1_555 ? 66 AC6 11 HIS B 15 ? HIS B 15 . ? 1_555 ? 67 AC6 11 HOH J . ? HOH B 311 . ? 1_555 ? 68 AC6 11 HOH J . ? HOH B 316 . ? 1_555 ? 69 AC6 11 HOH J . ? HOH B 346 . ? 1_555 ? 70 AC6 11 HOH J . ? HOH B 347 . ? 1_555 ? # _database_PDB_matrix.entry_id 4PRU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4PRU _atom_sites.fract_transf_matrix[1][1] 0.021720 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002521 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033025 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010596 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DM0 1 1 1 DM0 DM0 A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 MLY 13 13 13 MLY MLY A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 MLY 33 33 33 MLY MLY A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 MLY 96 96 96 MLY MLY A . n A 1 97 MLY 97 97 97 MLY MLY A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 MLY 116 116 116 MLY MLY A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 LEU 129 129 129 LEU LEU A . n B 1 1 DM0 1 1 1 DM0 DM0 B . n B 1 2 VAL 2 2 2 VAL VAL B . n B 1 3 PHE 3 3 3 PHE PHE B . n B 1 4 GLY 4 4 4 GLY GLY B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 CYS 6 6 6 CYS CYS B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 ALA 9 9 9 ALA ALA B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 MET 12 12 12 MET MET B . n B 1 13 MLY 13 13 13 MLY MLY B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 HIS 15 15 15 HIS HIS B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 ASP 18 18 18 ASP ASP B . n B 1 19 ASN 19 19 19 ASN ASN B . n B 1 20 TYR 20 20 20 TYR TYR B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 TYR 23 23 23 TYR TYR B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 TRP 28 28 28 TRP TRP B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 CYS 30 30 30 CYS CYS B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 ALA 32 32 32 ALA ALA B . n B 1 33 MLY 33 33 33 MLY MLY B . n B 1 34 PHE 34 34 34 PHE PHE B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 PHE 38 38 38 PHE PHE B . n B 1 39 ASN 39 39 39 ASN ASN B . n B 1 40 THR 40 40 40 THR THR B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ASN 44 44 44 ASN ASN B . n B 1 45 ARG 45 45 45 ARG ARG B . n B 1 46 ASN 46 46 46 ASN ASN B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 SER 50 50 50 SER SER B . n B 1 51 THR 51 51 51 THR THR B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 TYR 53 53 53 TYR TYR B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 GLN 57 57 57 GLN GLN B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 SER 60 60 60 SER SER B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 TRP 62 62 62 TRP TRP B . n B 1 63 TRP 63 63 63 TRP TRP B . n B 1 64 CYS 64 64 64 CYS CYS B . n B 1 65 ASN 65 65 65 ASN ASN B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 ARG 68 68 68 ARG ARG B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 PRO 70 70 70 PRO PRO B . n B 1 71 GLY 71 71 71 GLY GLY B . n B 1 72 SER 72 72 72 SER SER B . n B 1 73 ARG 73 73 73 ARG ARG B . n B 1 74 ASN 74 74 74 ASN ASN B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 CYS 76 76 76 CYS CYS B . n B 1 77 ASN 77 77 77 ASN ASN B . n B 1 78 ILE 78 78 78 ILE ILE B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 CYS 80 80 80 CYS CYS B . n B 1 81 SER 81 81 81 SER SER B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 LEU 84 84 84 LEU LEU B . n B 1 85 SER 85 85 85 SER SER B . n B 1 86 SER 86 86 86 SER SER B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 ILE 88 88 88 ILE ILE B . n B 1 89 THR 89 89 89 THR THR B . n B 1 90 ALA 90 90 90 ALA ALA B . n B 1 91 SER 91 91 91 SER SER B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 ASN 93 93 93 ASN ASN B . n B 1 94 CYS 94 94 94 CYS CYS B . n B 1 95 ALA 95 95 95 ALA ALA B . n B 1 96 MLY 96 96 96 MLY MLY B . n B 1 97 MLY 97 97 97 MLY MLY B . n B 1 98 ILE 98 98 98 ILE ILE B . n B 1 99 VAL 99 99 99 VAL VAL B . n B 1 100 SER 100 100 100 SER SER B . n B 1 101 ASP 101 101 101 ASP ASP B . n B 1 102 GLY 102 102 102 GLY GLY B . n B 1 103 ASN 103 103 103 ASN ASN B . n B 1 104 GLY 104 104 104 GLY GLY B . n B 1 105 MET 105 105 105 MET MET B . n B 1 106 ASN 106 106 106 ASN ASN B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 TRP 108 108 108 TRP TRP B . n B 1 109 VAL 109 109 109 VAL VAL B . n B 1 110 ALA 110 110 110 ALA ALA B . n B 1 111 TRP 111 111 111 TRP TRP B . n B 1 112 ARG 112 112 112 ARG ARG B . n B 1 113 ASN 113 113 113 ASN ASN B . n B 1 114 ARG 114 114 114 ARG ARG B . n B 1 115 CYS 115 115 115 CYS CYS B . n B 1 116 MLY 116 116 116 MLY MLY B . n B 1 117 GLY 117 117 117 GLY GLY B . n B 1 118 THR 118 118 118 THR THR B . n B 1 119 ASP 119 119 119 ASP ASP B . n B 1 120 VAL 120 120 120 VAL VAL B . n B 1 121 GLN 121 121 121 GLN GLN B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 TRP 123 123 123 TRP TRP B . n B 1 124 ILE 124 124 124 ILE ILE B . n B 1 125 ARG 125 125 125 ARG ARG B . n B 1 126 GLY 126 126 126 GLY GLY B . n B 1 127 CYS 127 127 127 CYS CYS B . n B 1 128 ARG 128 128 128 ARG ARG B . n B 1 129 LEU 129 129 129 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T3Y 1 201 201 T3Y T3Y A . D 2 T3Y 1 202 202 T3Y T3Y A . E 3 GOL 1 203 1 GOL GOL A . F 3 GOL 1 204 2 GOL GOL A . G 2 T3Y 1 201 201 T3Y T3Y B . H 2 T3Y 1 202 202 T3Y T3Y B . I 4 HOH 1 301 301 HOH HOH A . I 4 HOH 2 302 302 HOH HOH A . I 4 HOH 3 303 303 HOH HOH A . I 4 HOH 4 304 304 HOH HOH A . I 4 HOH 5 305 305 HOH HOH A . I 4 HOH 6 306 306 HOH HOH A . I 4 HOH 7 307 307 HOH HOH A . I 4 HOH 8 308 308 HOH HOH A . I 4 HOH 9 309 309 HOH HOH A . I 4 HOH 10 310 310 HOH HOH A . I 4 HOH 11 311 312 HOH HOH A . I 4 HOH 12 312 313 HOH HOH A . I 4 HOH 13 313 314 HOH HOH A . I 4 HOH 14 314 315 HOH HOH A . I 4 HOH 15 315 317 HOH HOH A . I 4 HOH 16 316 318 HOH HOH A . I 4 HOH 17 317 319 HOH HOH A . I 4 HOH 18 318 320 HOH HOH A . I 4 HOH 19 319 321 HOH HOH A . I 4 HOH 20 320 322 HOH HOH A . I 4 HOH 21 321 323 HOH HOH A . I 4 HOH 22 322 324 HOH HOH A . I 4 HOH 23 323 325 HOH HOH A . I 4 HOH 24 324 326 HOH HOH A . I 4 HOH 25 325 327 HOH HOH A . I 4 HOH 26 326 328 HOH HOH A . I 4 HOH 27 327 329 HOH HOH A . I 4 HOH 28 328 331 HOH HOH A . I 4 HOH 29 329 332 HOH HOH A . I 4 HOH 30 330 334 HOH HOH A . I 4 HOH 31 331 335 HOH HOH A . I 4 HOH 32 332 336 HOH HOH A . I 4 HOH 33 333 337 HOH HOH A . I 4 HOH 34 334 338 HOH HOH A . I 4 HOH 35 335 339 HOH HOH A . I 4 HOH 36 336 340 HOH HOH A . I 4 HOH 37 337 342 HOH HOH A . I 4 HOH 38 338 343 HOH HOH A . I 4 HOH 39 339 344 HOH HOH A . I 4 HOH 40 340 345 HOH HOH A . I 4 HOH 41 341 346 HOH HOH A . I 4 HOH 42 342 347 HOH HOH A . I 4 HOH 43 343 348 HOH HOH A . I 4 HOH 44 344 349 HOH HOH A . I 4 HOH 45 345 350 HOH HOH A . I 4 HOH 46 346 351 HOH HOH A . I 4 HOH 47 347 352 HOH HOH A . I 4 HOH 48 348 353 HOH HOH A . I 4 HOH 49 349 354 HOH HOH A . I 4 HOH 50 350 355 HOH HOH A . J 4 HOH 1 301 301 HOH HOH B . J 4 HOH 2 302 302 HOH HOH B . J 4 HOH 3 303 303 HOH HOH B . J 4 HOH 4 304 304 HOH HOH B . J 4 HOH 5 305 305 HOH HOH B . J 4 HOH 6 306 306 HOH HOH B . J 4 HOH 7 307 307 HOH HOH B . J 4 HOH 8 308 308 HOH HOH B . J 4 HOH 9 309 309 HOH HOH B . J 4 HOH 10 310 310 HOH HOH B . J 4 HOH 11 311 311 HOH HOH B . J 4 HOH 12 312 312 HOH HOH B . J 4 HOH 13 313 313 HOH HOH B . J 4 HOH 14 314 314 HOH HOH B . J 4 HOH 15 315 315 HOH HOH B . J 4 HOH 16 316 316 HOH HOH B . J 4 HOH 17 317 317 HOH HOH B . J 4 HOH 18 318 318 HOH HOH B . J 4 HOH 19 319 319 HOH HOH B . J 4 HOH 20 320 320 HOH HOH B . J 4 HOH 21 321 321 HOH HOH B . J 4 HOH 22 322 322 HOH HOH B . J 4 HOH 23 323 323 HOH HOH B . J 4 HOH 24 324 324 HOH HOH B . J 4 HOH 25 325 325 HOH HOH B . J 4 HOH 26 326 326 HOH HOH B . J 4 HOH 27 327 327 HOH HOH B . J 4 HOH 28 328 328 HOH HOH B . J 4 HOH 29 329 329 HOH HOH B . J 4 HOH 30 330 330 HOH HOH B . J 4 HOH 31 331 331 HOH HOH B . J 4 HOH 32 332 332 HOH HOH B . J 4 HOH 33 333 333 HOH HOH B . J 4 HOH 34 334 334 HOH HOH B . J 4 HOH 35 335 335 HOH HOH B . J 4 HOH 36 336 336 HOH HOH B . J 4 HOH 37 337 337 HOH HOH B . J 4 HOH 38 338 338 HOH HOH B . J 4 HOH 39 339 339 HOH HOH B . J 4 HOH 40 340 340 HOH HOH B . J 4 HOH 41 341 341 HOH HOH B . J 4 HOH 42 342 342 HOH HOH B . J 4 HOH 43 343 343 HOH HOH B . J 4 HOH 44 344 344 HOH HOH B . J 4 HOH 45 345 345 HOH HOH B . J 4 HOH 46 346 346 HOH HOH B . J 4 HOH 47 347 347 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A DM0 1 A DM0 1 ? LYS ? 2 A MLY 13 A MLY 13 ? LYS N-DIMETHYL-LYSINE 3 A MLY 33 A MLY 33 ? LYS N-DIMETHYL-LYSINE 4 A MLY 96 A MLY 96 ? LYS N-DIMETHYL-LYSINE 5 A MLY 97 A MLY 97 ? LYS N-DIMETHYL-LYSINE 6 A MLY 116 A MLY 116 ? LYS N-DIMETHYL-LYSINE 7 B DM0 1 B DM0 1 ? LYS ? 8 B MLY 13 B MLY 13 ? LYS N-DIMETHYL-LYSINE 9 B MLY 33 B MLY 33 ? LYS N-DIMETHYL-LYSINE 10 B MLY 96 B MLY 96 ? LYS N-DIMETHYL-LYSINE 11 B MLY 97 B MLY 97 ? LYS N-DIMETHYL-LYSINE 12 B MLY 116 B MLY 116 ? LYS N-DIMETHYL-LYSINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,I 2 1 B,G,H,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-12 2 'Structure model' 1 1 2015-01-21 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 REFMAC refinement 5.7.0029 ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 14 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 340 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 347 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 315 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_565 _pdbx_validate_symm_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 18 ? ? -53.60 109.04 2 1 ARG B 128 ? ? -59.55 94.88 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DM0 OXT O N N 88 DM0 N N N N 89 DM0 CA C N S 90 DM0 CB C N N 91 DM0 CG C N N 92 DM0 CD C N N 93 DM0 CE C N N 94 DM0 NZ N N N 95 DM0 CH1 C N N 96 DM0 CH2 C N N 97 DM0 C C N N 98 DM0 O O N N 99 DM0 CM1 C N N 100 DM0 CM2 C N N 101 DM0 HA H N N 102 DM0 HB H N N 103 DM0 HBA H N N 104 DM0 HG H N N 105 DM0 HGA H N N 106 DM0 HD H N N 107 DM0 HDA H N N 108 DM0 HE H N N 109 DM0 HEA H N N 110 DM0 HH1 H N N 111 DM0 HH1A H N N 112 DM0 HH1B H N N 113 DM0 HH2 H N N 114 DM0 HH2A H N N 115 DM0 HH2B H N N 116 DM0 HM1 H N N 117 DM0 HM1A H N N 118 DM0 HM1B H N N 119 DM0 HM2 H N N 120 DM0 HM2A H N N 121 DM0 HM2B H N N 122 DM0 HXT H N N 123 GLN N N N N 124 GLN CA C N S 125 GLN C C N N 126 GLN O O N N 127 GLN CB C N N 128 GLN CG C N N 129 GLN CD C N N 130 GLN OE1 O N N 131 GLN NE2 N N N 132 GLN OXT O N N 133 GLN H H N N 134 GLN H2 H N N 135 GLN HA H N N 136 GLN HB2 H N N 137 GLN HB3 H N N 138 GLN HG2 H N N 139 GLN HG3 H N N 140 GLN HE21 H N N 141 GLN HE22 H N N 142 GLN HXT H N N 143 GLU N N N N 144 GLU CA C N S 145 GLU C C N N 146 GLU O O N N 147 GLU CB C N N 148 GLU CG C N N 149 GLU CD C N N 150 GLU OE1 O N N 151 GLU OE2 O N N 152 GLU OXT O N N 153 GLU H H N N 154 GLU H2 H N N 155 GLU HA H N N 156 GLU HB2 H N N 157 GLU HB3 H N N 158 GLU HG2 H N N 159 GLU HG3 H N N 160 GLU HE2 H N N 161 GLU HXT H N N 162 GLY N N N N 163 GLY CA C N N 164 GLY C C N N 165 GLY O O N N 166 GLY OXT O N N 167 GLY H H N N 168 GLY H2 H N N 169 GLY HA2 H N N 170 GLY HA3 H N N 171 GLY HXT H N N 172 GOL C1 C N N 173 GOL O1 O N N 174 GOL C2 C N N 175 GOL O2 O N N 176 GOL C3 C N N 177 GOL O3 O N N 178 GOL H11 H N N 179 GOL H12 H N N 180 GOL HO1 H N N 181 GOL H2 H N N 182 GOL HO2 H N N 183 GOL H31 H N N 184 GOL H32 H N N 185 GOL HO3 H N N 186 HIS N N N N 187 HIS CA C N S 188 HIS C C N N 189 HIS O O N N 190 HIS CB C N N 191 HIS CG C Y N 192 HIS ND1 N Y N 193 HIS CD2 C Y N 194 HIS CE1 C Y N 195 HIS NE2 N Y N 196 HIS OXT O N N 197 HIS H H N N 198 HIS H2 H N N 199 HIS HA H N N 200 HIS HB2 H N N 201 HIS HB3 H N N 202 HIS HD1 H N N 203 HIS HD2 H N N 204 HIS HE1 H N N 205 HIS HE2 H N N 206 HIS HXT H N N 207 HOH O O N N 208 HOH H1 H N N 209 HOH H2 H N N 210 ILE N N N N 211 ILE CA C N S 212 ILE C C N N 213 ILE O O N N 214 ILE CB C N S 215 ILE CG1 C N N 216 ILE CG2 C N N 217 ILE CD1 C N N 218 ILE OXT O N N 219 ILE H H N N 220 ILE H2 H N N 221 ILE HA H N N 222 ILE HB H N N 223 ILE HG12 H N N 224 ILE HG13 H N N 225 ILE HG21 H N N 226 ILE HG22 H N N 227 ILE HG23 H N N 228 ILE HD11 H N N 229 ILE HD12 H N N 230 ILE HD13 H N N 231 ILE HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 MET N N N N 255 MET CA C N S 256 MET C C N N 257 MET O O N N 258 MET CB C N N 259 MET CG C N N 260 MET SD S N N 261 MET CE C N N 262 MET OXT O N N 263 MET H H N N 264 MET H2 H N N 265 MET HA H N N 266 MET HB2 H N N 267 MET HB3 H N N 268 MET HG2 H N N 269 MET HG3 H N N 270 MET HE1 H N N 271 MET HE2 H N N 272 MET HE3 H N N 273 MET HXT H N N 274 MLY N N N N 275 MLY CA C N S 276 MLY CB C N N 277 MLY CG C N N 278 MLY CD C N N 279 MLY CE C N N 280 MLY NZ N N N 281 MLY CH1 C N N 282 MLY CH2 C N N 283 MLY C C N N 284 MLY O O N N 285 MLY OXT O N N 286 MLY H H N N 287 MLY H2 H N N 288 MLY HA H N N 289 MLY HB2 H N N 290 MLY HB3 H N N 291 MLY HG2 H N N 292 MLY HG3 H N N 293 MLY HD2 H N N 294 MLY HD3 H N N 295 MLY HE2 H N N 296 MLY HE3 H N N 297 MLY HH11 H N N 298 MLY HH12 H N N 299 MLY HH13 H N N 300 MLY HH21 H N N 301 MLY HH22 H N N 302 MLY HH23 H N N 303 MLY HXT H N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 T3Y O3 O N N 359 T3Y S1 S N N 360 T3Y O1 O N N 361 T3Y O2 O N N 362 T3Y C1 C Y N 363 T3Y C24 C Y N 364 T3Y C23 C Y N 365 T3Y C22 C N N 366 T3Y C2 C Y N 367 T3Y C3 C Y N 368 T3Y C25 C Y N 369 T3Y O13 O N N 370 T3Y C4 C N N 371 T3Y C5 C Y N 372 T3Y C6 C Y N 373 T3Y C7 C Y N 374 T3Y S2 S N N 375 T3Y O4 O N N 376 T3Y O5 O N N 377 T3Y O6 O N N 378 T3Y C8 C Y N 379 T3Y C28 C Y N 380 T3Y O16 O N N 381 T3Y C9 C Y N 382 T3Y C10 C N N 383 T3Y C11 C Y N 384 T3Y C12 C Y N 385 T3Y C13 C Y N 386 T3Y S3 S N N 387 T3Y O7 O N N 388 T3Y O8 O N N 389 T3Y O9 O N N 390 T3Y C14 C Y N 391 T3Y C27 C Y N 392 T3Y O15 O N N 393 T3Y C15 C Y N 394 T3Y C16 C N N 395 T3Y C17 C Y N 396 T3Y C18 C Y N 397 T3Y C26 C Y N 398 T3Y O14 O N N 399 T3Y C21 C Y N 400 T3Y C20 C Y N 401 T3Y C19 C Y N 402 T3Y S4 S N N 403 T3Y O11 O N N 404 T3Y O10 O N N 405 T3Y O12 O N N 406 T3Y HO3 H N N 407 T3Y H24 H N N 408 T3Y H22 H N N 409 T3Y H22A H N N 410 T3Y H2 H N N 411 T3Y HO13 H N N 412 T3Y H4 H N N 413 T3Y H4A H N N 414 T3Y H6 H N N 415 T3Y HO5 H N N 416 T3Y H8 H N N 417 T3Y HO16 H N N 418 T3Y H10 H N N 419 T3Y H10A H N N 420 T3Y H12 H N N 421 T3Y HO8 H N N 422 T3Y H14 H N N 423 T3Y HO15 H N N 424 T3Y H16 H N N 425 T3Y H16A H N N 426 T3Y H18 H N N 427 T3Y HO14 H N N 428 T3Y H20 H N N 429 T3Y HO10 H N N 430 THR N N N N 431 THR CA C N S 432 THR C C N N 433 THR O O N N 434 THR CB C N R 435 THR OG1 O N N 436 THR CG2 C N N 437 THR OXT O N N 438 THR H H N N 439 THR H2 H N N 440 THR HA H N N 441 THR HB H N N 442 THR HG1 H N N 443 THR HG21 H N N 444 THR HG22 H N N 445 THR HG23 H N N 446 THR HXT H N N 447 TRP N N N N 448 TRP CA C N S 449 TRP C C N N 450 TRP O O N N 451 TRP CB C N N 452 TRP CG C Y N 453 TRP CD1 C Y N 454 TRP CD2 C Y N 455 TRP NE1 N Y N 456 TRP CE2 C Y N 457 TRP CE3 C Y N 458 TRP CZ2 C Y N 459 TRP CZ3 C Y N 460 TRP CH2 C Y N 461 TRP OXT O N N 462 TRP H H N N 463 TRP H2 H N N 464 TRP HA H N N 465 TRP HB2 H N N 466 TRP HB3 H N N 467 TRP HD1 H N N 468 TRP HE1 H N N 469 TRP HE3 H N N 470 TRP HZ2 H N N 471 TRP HZ3 H N N 472 TRP HH2 H N N 473 TRP HXT H N N 474 TYR N N N N 475 TYR CA C N S 476 TYR C C N N 477 TYR O O N N 478 TYR CB C N N 479 TYR CG C Y N 480 TYR CD1 C Y N 481 TYR CD2 C Y N 482 TYR CE1 C Y N 483 TYR CE2 C Y N 484 TYR CZ C Y N 485 TYR OH O N N 486 TYR OXT O N N 487 TYR H H N N 488 TYR H2 H N N 489 TYR HA H N N 490 TYR HB2 H N N 491 TYR HB3 H N N 492 TYR HD1 H N N 493 TYR HD2 H N N 494 TYR HE1 H N N 495 TYR HE2 H N N 496 TYR HH H N N 497 TYR HXT H N N 498 VAL N N N N 499 VAL CA C N S 500 VAL C C N N 501 VAL O O N N 502 VAL CB C N N 503 VAL CG1 C N N 504 VAL CG2 C N N 505 VAL OXT O N N 506 VAL H H N N 507 VAL H2 H N N 508 VAL HA H N N 509 VAL HB H N N 510 VAL HG11 H N N 511 VAL HG12 H N N 512 VAL HG13 H N N 513 VAL HG21 H N N 514 VAL HG22 H N N 515 VAL HG23 H N N 516 VAL HXT H N N 517 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DM0 OXT C sing N N 83 DM0 N CA sing N N 84 DM0 N CM1 sing N N 85 DM0 N CM2 sing N N 86 DM0 CA CB sing N N 87 DM0 CA C sing N N 88 DM0 CB CG sing N N 89 DM0 CG CD sing N N 90 DM0 CD CE sing N N 91 DM0 CE NZ sing N N 92 DM0 NZ CH1 sing N N 93 DM0 NZ CH2 sing N N 94 DM0 C O doub N N 95 DM0 CA HA sing N N 96 DM0 CB HB sing N N 97 DM0 CB HBA sing N N 98 DM0 CG HG sing N N 99 DM0 CG HGA sing N N 100 DM0 CD HD sing N N 101 DM0 CD HDA sing N N 102 DM0 CE HE sing N N 103 DM0 CE HEA sing N N 104 DM0 CH1 HH1 sing N N 105 DM0 CH1 HH1A sing N N 106 DM0 CH1 HH1B sing N N 107 DM0 CH2 HH2 sing N N 108 DM0 CH2 HH2A sing N N 109 DM0 CH2 HH2B sing N N 110 DM0 CM1 HM1 sing N N 111 DM0 CM1 HM1A sing N N 112 DM0 CM1 HM1B sing N N 113 DM0 CM2 HM2 sing N N 114 DM0 CM2 HM2A sing N N 115 DM0 CM2 HM2B sing N N 116 DM0 HXT OXT sing N N 117 GLN N CA sing N N 118 GLN N H sing N N 119 GLN N H2 sing N N 120 GLN CA C sing N N 121 GLN CA CB sing N N 122 GLN CA HA sing N N 123 GLN C O doub N N 124 GLN C OXT sing N N 125 GLN CB CG sing N N 126 GLN CB HB2 sing N N 127 GLN CB HB3 sing N N 128 GLN CG CD sing N N 129 GLN CG HG2 sing N N 130 GLN CG HG3 sing N N 131 GLN CD OE1 doub N N 132 GLN CD NE2 sing N N 133 GLN NE2 HE21 sing N N 134 GLN NE2 HE22 sing N N 135 GLN OXT HXT sing N N 136 GLU N CA sing N N 137 GLU N H sing N N 138 GLU N H2 sing N N 139 GLU CA C sing N N 140 GLU CA CB sing N N 141 GLU CA HA sing N N 142 GLU C O doub N N 143 GLU C OXT sing N N 144 GLU CB CG sing N N 145 GLU CB HB2 sing N N 146 GLU CB HB3 sing N N 147 GLU CG CD sing N N 148 GLU CG HG2 sing N N 149 GLU CG HG3 sing N N 150 GLU CD OE1 doub N N 151 GLU CD OE2 sing N N 152 GLU OE2 HE2 sing N N 153 GLU OXT HXT sing N N 154 GLY N CA sing N N 155 GLY N H sing N N 156 GLY N H2 sing N N 157 GLY CA C sing N N 158 GLY CA HA2 sing N N 159 GLY CA HA3 sing N N 160 GLY C O doub N N 161 GLY C OXT sing N N 162 GLY OXT HXT sing N N 163 GOL C1 O1 sing N N 164 GOL C1 C2 sing N N 165 GOL C1 H11 sing N N 166 GOL C1 H12 sing N N 167 GOL O1 HO1 sing N N 168 GOL C2 O2 sing N N 169 GOL C2 C3 sing N N 170 GOL C2 H2 sing N N 171 GOL O2 HO2 sing N N 172 GOL C3 O3 sing N N 173 GOL C3 H31 sing N N 174 GOL C3 H32 sing N N 175 GOL O3 HO3 sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 MLY N CA sing N N 261 MLY N H sing N N 262 MLY N H2 sing N N 263 MLY CA CB sing N N 264 MLY CA C sing N N 265 MLY CA HA sing N N 266 MLY CB CG sing N N 267 MLY CB HB2 sing N N 268 MLY CB HB3 sing N N 269 MLY CG CD sing N N 270 MLY CG HG2 sing N N 271 MLY CG HG3 sing N N 272 MLY CD CE sing N N 273 MLY CD HD2 sing N N 274 MLY CD HD3 sing N N 275 MLY CE NZ sing N N 276 MLY CE HE2 sing N N 277 MLY CE HE3 sing N N 278 MLY NZ CH1 sing N N 279 MLY NZ CH2 sing N N 280 MLY CH1 HH11 sing N N 281 MLY CH1 HH12 sing N N 282 MLY CH1 HH13 sing N N 283 MLY CH2 HH21 sing N N 284 MLY CH2 HH22 sing N N 285 MLY CH2 HH23 sing N N 286 MLY C O doub N N 287 MLY C OXT sing N N 288 MLY OXT HXT sing N N 289 PHE N CA sing N N 290 PHE N H sing N N 291 PHE N H2 sing N N 292 PHE CA C sing N N 293 PHE CA CB sing N N 294 PHE CA HA sing N N 295 PHE C O doub N N 296 PHE C OXT sing N N 297 PHE CB CG sing N N 298 PHE CB HB2 sing N N 299 PHE CB HB3 sing N N 300 PHE CG CD1 doub Y N 301 PHE CG CD2 sing Y N 302 PHE CD1 CE1 sing Y N 303 PHE CD1 HD1 sing N N 304 PHE CD2 CE2 doub Y N 305 PHE CD2 HD2 sing N N 306 PHE CE1 CZ doub Y N 307 PHE CE1 HE1 sing N N 308 PHE CE2 CZ sing Y N 309 PHE CE2 HE2 sing N N 310 PHE CZ HZ sing N N 311 PHE OXT HXT sing N N 312 PRO N CA sing N N 313 PRO N CD sing N N 314 PRO N H sing N N 315 PRO CA C sing N N 316 PRO CA CB sing N N 317 PRO CA HA sing N N 318 PRO C O doub N N 319 PRO C OXT sing N N 320 PRO CB CG sing N N 321 PRO CB HB2 sing N N 322 PRO CB HB3 sing N N 323 PRO CG CD sing N N 324 PRO CG HG2 sing N N 325 PRO CG HG3 sing N N 326 PRO CD HD2 sing N N 327 PRO CD HD3 sing N N 328 PRO OXT HXT sing N N 329 SER N CA sing N N 330 SER N H sing N N 331 SER N H2 sing N N 332 SER CA C sing N N 333 SER CA CB sing N N 334 SER CA HA sing N N 335 SER C O doub N N 336 SER C OXT sing N N 337 SER CB OG sing N N 338 SER CB HB2 sing N N 339 SER CB HB3 sing N N 340 SER OG HG sing N N 341 SER OXT HXT sing N N 342 T3Y S1 O3 sing N N 343 T3Y O3 HO3 sing N N 344 T3Y O2 S1 doub N N 345 T3Y S1 O1 doub N N 346 T3Y S1 C1 sing N N 347 T3Y C1 C2 doub Y N 348 T3Y C1 C24 sing Y N 349 T3Y C24 C23 doub Y N 350 T3Y C24 H24 sing N N 351 T3Y C23 C25 sing Y N 352 T3Y C23 C22 sing N N 353 T3Y C22 C21 sing N N 354 T3Y C22 H22 sing N N 355 T3Y C22 H22A sing N N 356 T3Y C2 C3 sing Y N 357 T3Y C2 H2 sing N N 358 T3Y C3 C4 sing N N 359 T3Y C3 C25 doub Y N 360 T3Y C25 O13 sing N N 361 T3Y O13 HO13 sing N N 362 T3Y C4 C5 sing N N 363 T3Y C4 H4 sing N N 364 T3Y C4 H4A sing N N 365 T3Y C5 C6 doub Y N 366 T3Y C5 C28 sing Y N 367 T3Y C6 C7 sing Y N 368 T3Y C6 H6 sing N N 369 T3Y C7 S2 sing N N 370 T3Y C7 C8 doub Y N 371 T3Y O6 S2 doub N N 372 T3Y S2 O4 doub N N 373 T3Y S2 O5 sing N N 374 T3Y O5 HO5 sing N N 375 T3Y C9 C8 sing Y N 376 T3Y C8 H8 sing N N 377 T3Y O16 C28 sing N N 378 T3Y C28 C9 doub Y N 379 T3Y O16 HO16 sing N N 380 T3Y C9 C10 sing N N 381 T3Y C10 C11 sing N N 382 T3Y C10 H10 sing N N 383 T3Y C10 H10A sing N N 384 T3Y C27 C11 doub Y N 385 T3Y C11 C12 sing Y N 386 T3Y C12 C13 doub Y N 387 T3Y C12 H12 sing N N 388 T3Y C14 C13 sing Y N 389 T3Y C13 S3 sing N N 390 T3Y O9 S3 doub N N 391 T3Y S3 O7 doub N N 392 T3Y S3 O8 sing N N 393 T3Y O8 HO8 sing N N 394 T3Y C15 C14 doub Y N 395 T3Y C14 H14 sing N N 396 T3Y O15 C27 sing N N 397 T3Y C27 C15 sing Y N 398 T3Y O15 HO15 sing N N 399 T3Y C16 C15 sing N N 400 T3Y C17 C16 sing N N 401 T3Y C16 H16 sing N N 402 T3Y C16 H16A sing N N 403 T3Y C26 C17 doub Y N 404 T3Y C17 C18 sing Y N 405 T3Y C19 C18 doub Y N 406 T3Y C18 H18 sing N N 407 T3Y C21 C26 sing Y N 408 T3Y O14 C26 sing N N 409 T3Y O14 HO14 sing N N 410 T3Y C21 C20 doub Y N 411 T3Y C20 C19 sing Y N 412 T3Y C20 H20 sing N N 413 T3Y C19 S4 sing N N 414 T3Y O11 S4 doub N N 415 T3Y S4 O12 doub N N 416 T3Y S4 O10 sing N N 417 T3Y O10 HO10 sing N N 418 THR N CA sing N N 419 THR N H sing N N 420 THR N H2 sing N N 421 THR CA C sing N N 422 THR CA CB sing N N 423 THR CA HA sing N N 424 THR C O doub N N 425 THR C OXT sing N N 426 THR CB OG1 sing N N 427 THR CB CG2 sing N N 428 THR CB HB sing N N 429 THR OG1 HG1 sing N N 430 THR CG2 HG21 sing N N 431 THR CG2 HG22 sing N N 432 THR CG2 HG23 sing N N 433 THR OXT HXT sing N N 434 TRP N CA sing N N 435 TRP N H sing N N 436 TRP N H2 sing N N 437 TRP CA C sing N N 438 TRP CA CB sing N N 439 TRP CA HA sing N N 440 TRP C O doub N N 441 TRP C OXT sing N N 442 TRP CB CG sing N N 443 TRP CB HB2 sing N N 444 TRP CB HB3 sing N N 445 TRP CG CD1 doub Y N 446 TRP CG CD2 sing Y N 447 TRP CD1 NE1 sing Y N 448 TRP CD1 HD1 sing N N 449 TRP CD2 CE2 doub Y N 450 TRP CD2 CE3 sing Y N 451 TRP NE1 CE2 sing Y N 452 TRP NE1 HE1 sing N N 453 TRP CE2 CZ2 sing Y N 454 TRP CE3 CZ3 doub Y N 455 TRP CE3 HE3 sing N N 456 TRP CZ2 CH2 doub Y N 457 TRP CZ2 HZ2 sing N N 458 TRP CZ3 CH2 sing Y N 459 TRP CZ3 HZ3 sing N N 460 TRP CH2 HH2 sing N N 461 TRP OXT HXT sing N N 462 TYR N CA sing N N 463 TYR N H sing N N 464 TYR N H2 sing N N 465 TYR CA C sing N N 466 TYR CA CB sing N N 467 TYR CA HA sing N N 468 TYR C O doub N N 469 TYR C OXT sing N N 470 TYR CB CG sing N N 471 TYR CB HB2 sing N N 472 TYR CB HB3 sing N N 473 TYR CG CD1 doub Y N 474 TYR CG CD2 sing Y N 475 TYR CD1 CE1 sing Y N 476 TYR CD1 HD1 sing N N 477 TYR CD2 CE2 doub Y N 478 TYR CD2 HD2 sing N N 479 TYR CE1 CZ doub Y N 480 TYR CE1 HE1 sing N N 481 TYR CE2 CZ sing Y N 482 TYR CE2 HE2 sing N N 483 TYR CZ OH sing N N 484 TYR OH HH sing N N 485 TYR OXT HXT sing N N 486 VAL N CA sing N N 487 VAL N H sing N N 488 VAL N H2 sing N N 489 VAL CA C sing N N 490 VAL CA CB sing N N 491 VAL CA HA sing N N 492 VAL C O doub N N 493 VAL C OXT sing N N 494 VAL CB CG1 sing N N 495 VAL CB CG2 sing N N 496 VAL CB HB sing N N 497 VAL CG1 HG11 sing N N 498 VAL CG1 HG12 sing N N 499 VAL CG1 HG13 sing N N 500 VAL CG2 HG21 sing N N 501 VAL CG2 HG22 sing N N 502 VAL CG2 HG23 sing N N 503 VAL OXT HXT sing N N 504 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid ; T3Y 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4PQR _pdbx_initial_refinement_model.details ? #