data_4PT1 # _entry.id 4PT1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4PT1 RCSB RCSB085184 WWPDB D_1000085184 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4PT1 _pdbx_database_status.recvd_initial_deposition_date 2014-03-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zheng, J.' 1 'Li, J.' 2 'Chen, Z.' 3 # _citation.id primary _citation.title 'Crystal structure of the Locusta migratoria odorant binding protein.' _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_volume 456 _citation.page_first 737 _citation.page_last 742 _citation.year 2015 _citation.journal_id_ASTM BBRCA9 _citation.country US _citation.journal_id_ISSN 0006-291X _citation.journal_id_CSD 0146 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25522876 _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2014.12.048 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zheng, J.' 1 primary 'Li, J.' 2 primary 'Han, L.' 3 primary 'Wang, Y.' 4 primary 'Wu, W.' 5 primary 'Qi, X.' 6 primary 'Tao, Y.' 7 primary 'Zhang, L.' 8 primary 'Zhang, Z.' 9 primary 'Chen, Z.' 10 # _cell.entry_id 4PT1 _cell.length_a 33.103 _cell.length_b 66.039 _cell.length_c 51.134 _cell.angle_alpha 90.00 _cell.angle_beta 92.41 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4PT1 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Odorant-binding protein 1d' 14988.765 2 ? ? ? ? 2 non-polymer syn '2-(2-METHOXYETHOXY)ETHANOL' 120.147 4 ? ? ? ? 3 water nat water 18.015 153 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDVNMKLTGRIMDAAKEVDHTCRSSTGVPRDMLHRYAEGQTVDDDDFKCYLKCIMVEFNSLSDDGVFVLEEELENVPPEI KEEGHRVVHSCKHINHDEACETAYQIHQCYKQSDPELYSLVVRAFDATIGD ; _entity_poly.pdbx_seq_one_letter_code_can ;MDVNMKLTGRIMDAAKEVDHTCRSSTGVPRDMLHRYAEGQTVDDDDFKCYLKCIMVEFNSLSDDGVFVLEEELENVPPEI KEEGHRVVHSCKHINHDEACETAYQIHQCYKQSDPELYSLVVRAFDATIGD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 VAL n 1 4 ASN n 1 5 MET n 1 6 LYS n 1 7 LEU n 1 8 THR n 1 9 GLY n 1 10 ARG n 1 11 ILE n 1 12 MET n 1 13 ASP n 1 14 ALA n 1 15 ALA n 1 16 LYS n 1 17 GLU n 1 18 VAL n 1 19 ASP n 1 20 HIS n 1 21 THR n 1 22 CYS n 1 23 ARG n 1 24 SER n 1 25 SER n 1 26 THR n 1 27 GLY n 1 28 VAL n 1 29 PRO n 1 30 ARG n 1 31 ASP n 1 32 MET n 1 33 LEU n 1 34 HIS n 1 35 ARG n 1 36 TYR n 1 37 ALA n 1 38 GLU n 1 39 GLY n 1 40 GLN n 1 41 THR n 1 42 VAL n 1 43 ASP n 1 44 ASP n 1 45 ASP n 1 46 ASP n 1 47 PHE n 1 48 LYS n 1 49 CYS n 1 50 TYR n 1 51 LEU n 1 52 LYS n 1 53 CYS n 1 54 ILE n 1 55 MET n 1 56 VAL n 1 57 GLU n 1 58 PHE n 1 59 ASN n 1 60 SER n 1 61 LEU n 1 62 SER n 1 63 ASP n 1 64 ASP n 1 65 GLY n 1 66 VAL n 1 67 PHE n 1 68 VAL n 1 69 LEU n 1 70 GLU n 1 71 GLU n 1 72 GLU n 1 73 LEU n 1 74 GLU n 1 75 ASN n 1 76 VAL n 1 77 PRO n 1 78 PRO n 1 79 GLU n 1 80 ILE n 1 81 LYS n 1 82 GLU n 1 83 GLU n 1 84 GLY n 1 85 HIS n 1 86 ARG n 1 87 VAL n 1 88 VAL n 1 89 HIS n 1 90 SER n 1 91 CYS n 1 92 LYS n 1 93 HIS n 1 94 ILE n 1 95 ASN n 1 96 HIS n 1 97 ASP n 1 98 GLU n 1 99 ALA n 1 100 CYS n 1 101 GLU n 1 102 THR n 1 103 ALA n 1 104 TYR n 1 105 GLN n 1 106 ILE n 1 107 HIS n 1 108 GLN n 1 109 CYS n 1 110 TYR n 1 111 LYS n 1 112 GLN n 1 113 SER n 1 114 ASP n 1 115 PRO n 1 116 GLU n 1 117 LEU n 1 118 TYR n 1 119 SER n 1 120 LEU n 1 121 VAL n 1 122 VAL n 1 123 ARG n 1 124 ALA n 1 125 PHE n 1 126 ASP n 1 127 ALA n 1 128 THR n 1 129 ILE n 1 130 GLY n 1 131 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Migratory locust' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lmigobp1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Locusta migratoria' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7004 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet-22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q3HM32_LOCMI _struct_ref.pdbx_db_accession Q3HM32 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DVNMKLTGRIMDAAKEVDHTCRSSTGVPRDMLHRYAEGQTVDDDDFKCYLKCIMVEFNSLSDDGVFVLEEELENVPPEIK EEGHRVVHSCKHINHDEACETAYQIHQCYKQSDPELYSLVVRAFDATIGD ; _struct_ref.pdbx_align_begin 23 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4PT1 A 2 ? 131 ? Q3HM32 23 ? 152 ? 2 131 2 1 4PT1 B 2 ? 131 ? Q3HM32 23 ? 152 ? 2 131 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4PT1 MET A 1 ? UNP Q3HM32 ? ? 'EXPRESSION TAG' 1 1 2 4PT1 MET B 1 ? UNP Q3HM32 ? ? 'EXPRESSION TAG' 1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PG0 non-polymer . '2-(2-METHOXYETHOXY)ETHANOL' 'PEG 6000' 'C5 H12 O3' 120.147 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4PT1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.86 _exptl_crystal.density_percent_sol 33.97 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details '25% PEG 3350, pH 6, VAPOR DIFFUSION, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 130 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.pdbx_collection_date 2011-12-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NE3A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NE3A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 4PT1 _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F 3 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.65 _reflns.number_obs 23722 _reflns.number_all 26355 _reflns.percent_possible_obs 90 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.68 _reflns_shell.percent_possible_all 51 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4PT1 _refine.ls_number_reflns_obs 22536 _refine.ls_number_reflns_all 23722 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 89.90 _refine.ls_R_factor_obs 0.18592 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18364 _refine.ls_R_factor_R_free 0.22906 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1176 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 16.379 _refine.aniso_B[1][1] 0.72 _refine.aniso_B[2][2] -1.85 _refine.aniso_B[3][3] 1.18 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.59 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.279 _refine.pdbx_overall_ESU_R_Free 0.124 _refine.overall_SU_ML 0.081 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.383 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1982 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 2161 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.010 0.020 ? 2078 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1367 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.305 1.947 ? 2811 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.975 3.007 ? 3339 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.047 5.000 ? 262 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 38.405 25.050 ? 101 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 14.424 15.000 ? 340 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16.066 15.000 ? 8 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.082 0.200 ? 311 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 2321 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 395 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2.601 3.000 ? 3441 ? 'X-RAY DIFFRACTION' r_sphericity_free 21.113 5.000 ? 57 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 7.044 5.000 ? 3491 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.653 _refine_ls_shell.d_res_low 1.696 _refine_ls_shell.number_reflns_R_work 898 _refine_ls_shell.R_factor_R_work 0.210 _refine_ls_shell.percent_reflns_obs 50.32 _refine_ls_shell.R_factor_R_free 0.350 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 47 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4PT1 _struct.title 'Crystal structure of Locusta migratoria odorant binding proteins lmigOBP1' _struct.pdbx_descriptor 'Odorant-binding protein 1d' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PT1 _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'OBP, odorant perception, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 9 ? ALA A 14 ? GLY A 9 ALA A 14 1 ? 6 HELX_P HELX_P2 2 ALA A 14 ? GLY A 27 ? ALA A 14 GLY A 27 1 ? 14 HELX_P HELX_P3 3 PRO A 29 ? GLU A 38 ? PRO A 29 GLU A 38 1 ? 10 HELX_P HELX_P4 4 ASP A 44 ? PHE A 58 ? ASP A 44 PHE A 58 1 ? 15 HELX_P HELX_P5 5 VAL A 68 ? VAL A 76 ? VAL A 68 VAL A 76 1 ? 9 HELX_P HELX_P6 6 PRO A 77 ? GLU A 79 ? PRO A 77 GLU A 79 5 ? 3 HELX_P HELX_P7 7 ILE A 80 ? CYS A 91 ? ILE A 80 CYS A 91 1 ? 12 HELX_P HELX_P8 8 GLU A 98 ? ASP A 114 ? GLU A 98 ASP A 114 1 ? 17 HELX_P HELX_P9 9 ASP A 114 ? GLY A 130 ? ASP A 114 GLY A 130 1 ? 17 HELX_P HELX_P10 10 GLY B 9 ? GLY B 27 ? GLY B 9 GLY B 27 1 ? 19 HELX_P HELX_P11 11 PRO B 29 ? GLU B 38 ? PRO B 29 GLU B 38 1 ? 10 HELX_P HELX_P12 12 ASP B 44 ? PHE B 58 ? ASP B 44 PHE B 58 1 ? 15 HELX_P HELX_P13 13 VAL B 68 ? VAL B 76 ? VAL B 68 VAL B 76 1 ? 9 HELX_P HELX_P14 14 PRO B 77 ? GLU B 79 ? PRO B 77 GLU B 79 5 ? 3 HELX_P HELX_P15 15 ILE B 80 ? LYS B 92 ? ILE B 80 LYS B 92 1 ? 13 HELX_P HELX_P16 16 GLU B 98 ? ASP B 114 ? GLU B 98 ASP B 114 1 ? 17 HELX_P HELX_P17 17 ASP B 114 ? GLY B 130 ? ASP B 114 GLY B 130 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 22 A CYS 53 1_555 ? ? ? ? ? ? ? 2.058 ? disulf2 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 100 SG ? ? A CYS 49 A CYS 100 1_555 ? ? ? ? ? ? ? 2.046 ? disulf3 disulf ? ? A CYS 91 SG ? ? ? 1_555 A CYS 109 SG ? ? A CYS 91 A CYS 109 1_555 ? ? ? ? ? ? ? 2.049 ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 53 SG ? ? B CYS 22 B CYS 53 1_555 ? ? ? ? ? ? ? 2.044 ? disulf5 disulf ? ? B CYS 49 SG ? ? ? 1_555 B CYS 100 SG ? ? B CYS 49 B CYS 100 1_555 ? ? ? ? ? ? ? 2.076 ? disulf6 disulf ? ? B CYS 91 SG ? ? ? 1_555 B CYS 109 SG ? ? B CYS 91 B CYS 109 1_555 ? ? ? ? ? ? ? 2.043 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PG0 B 201' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PG0 B 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 TYR B 110 ? TYR B 110 . ? 1_555 ? 2 AC1 2 PG0 F . ? PG0 B 202 . ? 1_555 ? 3 AC2 2 LEU B 33 ? LEU B 33 . ? 1_555 ? 4 AC2 2 PG0 E . ? PG0 B 201 . ? 1_555 ? # _database_PDB_matrix.entry_id 4PT1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4PT1 _atom_sites.fract_transf_matrix[1][1] 0.030209 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001270 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015143 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019574 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 MET 5 5 5 MET MET A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 HIS 20 20 20 HIS HIS A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 CYS 53 53 53 CYS CYS A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 HIS 85 85 85 HIS HIS A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 CYS 91 91 91 CYS CYS A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 CYS 100 100 100 CYS CYS A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 CYS 109 109 109 CYS CYS A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 ASP 131 131 131 ASP ASP A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ASP 2 2 ? ? ? B . n B 1 3 VAL 3 3 ? ? ? B . n B 1 4 ASN 4 4 4 ASN ASN B . n B 1 5 MET 5 5 5 MET MET B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 ILE 11 11 11 ILE ILE B . n B 1 12 MET 12 12 12 MET MET B . n B 1 13 ASP 13 13 13 ASP ASP B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 GLU 17 17 17 GLU GLU B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 HIS 20 20 20 HIS HIS B . n B 1 21 THR 21 21 21 THR THR B . n B 1 22 CYS 22 22 22 CYS CYS B . n B 1 23 ARG 23 23 23 ARG ARG B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 PRO 29 29 29 PRO PRO B . n B 1 30 ARG 30 30 30 ARG ARG B . n B 1 31 ASP 31 31 31 ASP ASP B . n B 1 32 MET 32 32 32 MET MET B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 HIS 34 34 34 HIS HIS B . n B 1 35 ARG 35 35 35 ARG ARG B . n B 1 36 TYR 36 36 36 TYR TYR B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 THR 41 41 41 THR THR B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 ASP 44 44 44 ASP ASP B . n B 1 45 ASP 45 45 45 ASP ASP B . n B 1 46 ASP 46 46 46 ASP ASP B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 CYS 49 49 49 CYS CYS B . n B 1 50 TYR 50 50 50 TYR TYR B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 CYS 53 53 53 CYS CYS B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 MET 55 55 55 MET MET B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 PHE 58 58 58 PHE PHE B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 SER 60 60 60 SER SER B . n B 1 61 LEU 61 61 61 LEU LEU B . n B 1 62 SER 62 62 62 SER SER B . n B 1 63 ASP 63 63 63 ASP ASP B . n B 1 64 ASP 64 64 64 ASP ASP B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 PHE 67 67 67 PHE PHE B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 GLU 70 70 70 GLU GLU B . n B 1 71 GLU 71 71 71 GLU GLU B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 ASN 75 75 75 ASN ASN B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 PRO 77 77 77 PRO PRO B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 GLU 79 79 79 GLU GLU B . n B 1 80 ILE 80 80 80 ILE ILE B . n B 1 81 LYS 81 81 81 LYS LYS B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 GLU 83 83 83 GLU GLU B . n B 1 84 GLY 84 84 84 GLY GLY B . n B 1 85 HIS 85 85 85 HIS HIS B . n B 1 86 ARG 86 86 86 ARG ARG B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 HIS 89 89 89 HIS HIS B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 CYS 91 91 91 CYS CYS B . n B 1 92 LYS 92 92 92 LYS LYS B . n B 1 93 HIS 93 93 93 HIS HIS B . n B 1 94 ILE 94 94 94 ILE ILE B . n B 1 95 ASN 95 95 95 ASN ASN B . n B 1 96 HIS 96 96 96 HIS HIS B . n B 1 97 ASP 97 97 97 ASP ASP B . n B 1 98 GLU 98 98 98 GLU GLU B . n B 1 99 ALA 99 99 99 ALA ALA B . n B 1 100 CYS 100 100 100 CYS CYS B . n B 1 101 GLU 101 101 101 GLU GLU B . n B 1 102 THR 102 102 102 THR THR B . n B 1 103 ALA 103 103 103 ALA ALA B . n B 1 104 TYR 104 104 104 TYR TYR B . n B 1 105 GLN 105 105 105 GLN GLN B . n B 1 106 ILE 106 106 106 ILE ILE B . n B 1 107 HIS 107 107 107 HIS HIS B . n B 1 108 GLN 108 108 108 GLN GLN B . n B 1 109 CYS 109 109 109 CYS CYS B . n B 1 110 TYR 110 110 110 TYR TYR B . n B 1 111 LYS 111 111 111 LYS LYS B . n B 1 112 GLN 112 112 112 GLN GLN B . n B 1 113 SER 113 113 113 SER SER B . n B 1 114 ASP 114 114 114 ASP ASP B . n B 1 115 PRO 115 115 115 PRO PRO B . n B 1 116 GLU 116 116 116 GLU GLU B . n B 1 117 LEU 117 117 117 LEU LEU B . n B 1 118 TYR 118 118 118 TYR TYR B . n B 1 119 SER 119 119 119 SER SER B . n B 1 120 LEU 120 120 120 LEU LEU B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 VAL 122 122 122 VAL VAL B . n B 1 123 ARG 123 123 123 ARG ARG B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 PHE 125 125 125 PHE PHE B . n B 1 126 ASP 126 126 126 ASP ASP B . n B 1 127 ALA 127 127 127 ALA ALA B . n B 1 128 THR 128 128 128 THR THR B . n B 1 129 ILE 129 129 129 ILE ILE B . n B 1 130 GLY 130 130 130 GLY GLY B . n B 1 131 ASP 131 131 131 ASP ASP B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-31 2 'Structure model' 1 1 2015-10-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 BALBES phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HIS 96 ? ? O A HOH 351 ? ? 2.05 2 1 O A GLY 39 ? ? O A HOH 356 ? ? 2.08 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 HIS _pdbx_validate_rmsd_bond.auth_seq_id_1 96 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 HIS _pdbx_validate_rmsd_bond.auth_seq_id_2 96 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.411 _pdbx_validate_rmsd_bond.bond_target_value 1.354 _pdbx_validate_rmsd_bond.bond_deviation 0.057 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.009 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 8 ? ? -110.20 -157.99 2 1 ASP A 31 ? ? -34.92 -31.70 3 1 ASN A 95 ? ? -160.23 115.04 4 1 ASP A 114 ? ? -153.35 82.23 5 1 THR B 8 ? ? -122.24 -166.87 6 1 ASP B 114 ? ? -156.61 81.96 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 3 ? CG1 ? A VAL 3 CG1 2 1 Y 1 A VAL 3 ? CG2 ? A VAL 3 CG2 3 1 Y 1 A MET 5 ? CG ? A MET 5 CG 4 1 Y 1 A MET 5 ? SD ? A MET 5 SD 5 1 Y 1 A MET 5 ? CE ? A MET 5 CE 6 1 Y 1 A LYS 6 ? NZ ? A LYS 6 NZ 7 1 Y 1 A LYS 16 ? CD ? A LYS 16 CD 8 1 Y 1 A LYS 16 ? CE ? A LYS 16 CE 9 1 Y 1 A LYS 16 ? NZ ? A LYS 16 NZ 10 1 Y 1 A ASP 31 ? CG ? A ASP 31 CG 11 1 Y 1 A ASP 31 ? OD1 ? A ASP 31 OD1 12 1 Y 1 A ASP 31 ? OD2 ? A ASP 31 OD2 13 1 Y 1 A ARG 35 ? CG ? A ARG 35 CG 14 1 Y 1 A ARG 35 ? CD ? A ARG 35 CD 15 1 Y 1 A ARG 35 ? NE ? A ARG 35 NE 16 1 Y 1 A ARG 35 ? CZ ? A ARG 35 CZ 17 1 Y 1 A ARG 35 ? NH1 ? A ARG 35 NH1 18 1 Y 1 A ARG 35 ? NH2 ? A ARG 35 NH2 19 1 Y 1 A GLU 38 ? CG ? A GLU 38 CG 20 1 Y 1 A GLU 38 ? CD ? A GLU 38 CD 21 1 Y 1 A GLU 38 ? OE1 ? A GLU 38 OE1 22 1 Y 1 A GLU 38 ? OE2 ? A GLU 38 OE2 23 1 Y 1 A GLN 40 ? CG ? A GLN 40 CG 24 1 Y 1 A GLN 40 ? CD ? A GLN 40 CD 25 1 Y 1 A GLN 40 ? OE1 ? A GLN 40 OE1 26 1 Y 1 A GLN 40 ? NE2 ? A GLN 40 NE2 27 1 Y 1 A GLU 70 ? CG ? A GLU 70 CG 28 1 Y 1 A GLU 70 ? CD ? A GLU 70 CD 29 1 Y 1 A GLU 70 ? OE1 ? A GLU 70 OE1 30 1 Y 1 A GLU 70 ? OE2 ? A GLU 70 OE2 31 1 Y 1 A ARG 86 ? CZ ? A ARG 86 CZ 32 1 Y 1 A ARG 86 ? NH1 ? A ARG 86 NH1 33 1 Y 1 A ARG 86 ? NH2 ? A ARG 86 NH2 34 1 Y 1 A ASN 95 ? OD1 ? A ASN 95 OD1 35 1 Y 1 A ASP 97 ? CG ? A ASP 97 CG 36 1 Y 1 A ASP 97 ? OD1 ? A ASP 97 OD1 37 1 Y 1 A ASP 97 ? OD2 ? A ASP 97 OD2 38 1 Y 1 A LYS 111 ? NZ ? A LYS 111 NZ 39 1 Y 1 A GLU 116 ? OE2 ? A GLU 116 OE2 40 1 Y 1 A ARG 123 ? CZ ? A ARG 123 CZ 41 1 Y 1 A ARG 123 ? NH1 ? A ARG 123 NH1 42 1 Y 1 A ARG 123 ? NH2 ? A ARG 123 NH2 43 1 Y 1 B MET 5 ? SD ? B MET 5 SD 44 1 Y 1 B MET 5 ? CE ? B MET 5 CE 45 1 Y 1 B LYS 6 ? CD ? B LYS 6 CD 46 1 Y 1 B LYS 6 ? CE ? B LYS 6 CE 47 1 Y 1 B LYS 6 ? NZ ? B LYS 6 NZ 48 1 Y 1 B GLU 38 ? OE2 ? B GLU 38 OE2 49 1 Y 1 B GLN 40 ? CD ? B GLN 40 CD 50 1 Y 1 B GLN 40 ? OE1 ? B GLN 40 OE1 51 1 Y 1 B GLN 40 ? NE2 ? B GLN 40 NE2 52 1 Y 1 B GLU 70 ? CG ? B GLU 70 CG 53 1 Y 1 B GLU 70 ? CD ? B GLU 70 CD 54 1 Y 1 B GLU 70 ? OE1 ? B GLU 70 OE1 55 1 Y 1 B GLU 70 ? OE2 ? B GLU 70 OE2 56 1 Y 1 B GLN 112 ? CG ? B GLN 112 CG 57 1 Y 1 B GLN 112 ? CD ? B GLN 112 CD 58 1 Y 1 B GLN 112 ? OE1 ? B GLN 112 OE1 59 1 Y 1 B GLN 112 ? NE2 ? B GLN 112 NE2 60 1 Y 1 B GLU 116 ? CD ? B GLU 116 CD 61 1 Y 1 B GLU 116 ? OE1 ? B GLU 116 OE1 62 1 Y 1 B GLU 116 ? OE2 ? B GLU 116 OE2 63 1 Y 1 B ARG 123 ? CZ ? B ARG 123 CZ 64 1 Y 1 B ARG 123 ? NH1 ? B ARG 123 NH1 65 1 Y 1 B ARG 123 ? NH2 ? B ARG 123 NH2 66 1 N 1 A PG0 201 ? C5 ? C PG0 1 C5 67 1 N 1 A PG0 201 ? OTT ? C PG0 1 OTT 68 1 N 1 A PG0 202 ? C5 ? D PG0 1 C5 69 1 N 1 A PG0 202 ? C1 ? D PG0 1 C1 70 1 N 1 A PG0 202 ? OTT ? D PG0 1 OTT 71 1 N 1 B PG0 201 ? C5 ? E PG0 1 C5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 B MET 1 ? B MET 1 4 1 Y 1 B ASP 2 ? B ASP 2 5 1 Y 1 B VAL 3 ? B VAL 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-(2-METHOXYETHOXY)ETHANOL' PG0 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PG0 1 201 140 PG0 PEU A . D 2 PG0 1 202 141 PG0 PEU A . E 2 PG0 1 201 140 PG0 PEU B . F 2 PG0 1 202 141 PG0 PEU B . G 3 HOH 1 301 2 HOH HOH A . G 3 HOH 2 302 12 HOH HOH A . G 3 HOH 3 303 21 HOH HOH A . G 3 HOH 4 304 22 HOH HOH A . G 3 HOH 5 305 34 HOH HOH A . G 3 HOH 6 306 36 HOH HOH A . G 3 HOH 7 307 39 HOH HOH A . G 3 HOH 8 308 42 HOH HOH A . G 3 HOH 9 309 44 HOH HOH A . G 3 HOH 10 310 45 HOH HOH A . G 3 HOH 11 311 46 HOH HOH A . G 3 HOH 12 312 47 HOH HOH A . G 3 HOH 13 313 50 HOH HOH A . G 3 HOH 14 314 51 HOH HOH A . G 3 HOH 15 315 52 HOH HOH A . G 3 HOH 16 316 55 HOH HOH A . G 3 HOH 17 317 56 HOH HOH A . G 3 HOH 18 318 58 HOH HOH A . G 3 HOH 19 319 59 HOH HOH A . G 3 HOH 20 320 66 HOH HOH A . G 3 HOH 21 321 67 HOH HOH A . G 3 HOH 22 322 70 HOH HOH A . G 3 HOH 23 323 71 HOH HOH A . G 3 HOH 24 324 72 HOH HOH A . G 3 HOH 25 325 73 HOH HOH A . G 3 HOH 26 326 74 HOH HOH A . G 3 HOH 27 327 75 HOH HOH A . G 3 HOH 28 328 76 HOH HOH A . G 3 HOH 29 329 82 HOH HOH A . G 3 HOH 30 330 83 HOH HOH A . G 3 HOH 31 331 84 HOH HOH A . G 3 HOH 32 332 85 HOH HOH A . G 3 HOH 33 333 87 HOH HOH A . G 3 HOH 34 334 90 HOH HOH A . G 3 HOH 35 335 91 HOH HOH A . G 3 HOH 36 336 93 HOH HOH A . G 3 HOH 37 337 96 HOH HOH A . G 3 HOH 38 338 97 HOH HOH A . G 3 HOH 39 339 98 HOH HOH A . G 3 HOH 40 340 99 HOH HOH A . G 3 HOH 41 341 107 HOH HOH A . G 3 HOH 42 342 108 HOH HOH A . G 3 HOH 43 343 109 HOH HOH A . G 3 HOH 44 344 110 HOH HOH A . G 3 HOH 45 345 113 HOH HOH A . G 3 HOH 46 346 115 HOH HOH A . G 3 HOH 47 347 121 HOH HOH A . G 3 HOH 48 348 122 HOH HOH A . G 3 HOH 49 349 124 HOH HOH A . G 3 HOH 50 350 127 HOH HOH A . G 3 HOH 51 351 131 HOH HOH A . G 3 HOH 52 352 132 HOH HOH A . G 3 HOH 53 353 133 HOH HOH A . G 3 HOH 54 354 134 HOH HOH A . G 3 HOH 55 355 135 HOH HOH A . G 3 HOH 56 356 136 HOH HOH A . G 3 HOH 57 357 139 HOH HOH A . G 3 HOH 58 358 141 HOH HOH A . G 3 HOH 59 359 143 HOH HOH A . G 3 HOH 60 360 144 HOH HOH A . G 3 HOH 61 361 145 HOH HOH A . G 3 HOH 62 362 148 HOH HOH A . G 3 HOH 63 363 150 HOH HOH A . G 3 HOH 64 364 151 HOH HOH A . G 3 HOH 65 365 152 HOH HOH A . G 3 HOH 66 366 153 HOH HOH A . H 3 HOH 1 301 1 HOH HOH B . H 3 HOH 2 302 3 HOH HOH B . H 3 HOH 3 303 4 HOH HOH B . H 3 HOH 4 304 5 HOH HOH B . H 3 HOH 5 305 6 HOH HOH B . H 3 HOH 6 306 7 HOH HOH B . H 3 HOH 7 307 8 HOH HOH B . H 3 HOH 8 308 9 HOH HOH B . H 3 HOH 9 309 10 HOH HOH B . H 3 HOH 10 310 11 HOH HOH B . H 3 HOH 11 311 13 HOH HOH B . H 3 HOH 12 312 14 HOH HOH B . H 3 HOH 13 313 15 HOH HOH B . H 3 HOH 14 314 16 HOH HOH B . H 3 HOH 15 315 17 HOH HOH B . H 3 HOH 16 316 18 HOH HOH B . H 3 HOH 17 317 19 HOH HOH B . H 3 HOH 18 318 20 HOH HOH B . H 3 HOH 19 319 23 HOH HOH B . H 3 HOH 20 320 24 HOH HOH B . H 3 HOH 21 321 25 HOH HOH B . H 3 HOH 22 322 26 HOH HOH B . H 3 HOH 23 323 27 HOH HOH B . H 3 HOH 24 324 28 HOH HOH B . H 3 HOH 25 325 29 HOH HOH B . H 3 HOH 26 326 30 HOH HOH B . H 3 HOH 27 327 31 HOH HOH B . H 3 HOH 28 328 32 HOH HOH B . H 3 HOH 29 329 33 HOH HOH B . H 3 HOH 30 330 35 HOH HOH B . H 3 HOH 31 331 37 HOH HOH B . H 3 HOH 32 332 38 HOH HOH B . H 3 HOH 33 333 40 HOH HOH B . H 3 HOH 34 334 41 HOH HOH B . H 3 HOH 35 335 43 HOH HOH B . H 3 HOH 36 336 48 HOH HOH B . H 3 HOH 37 337 49 HOH HOH B . H 3 HOH 38 338 53 HOH HOH B . H 3 HOH 39 339 54 HOH HOH B . H 3 HOH 40 340 57 HOH HOH B . H 3 HOH 41 341 60 HOH HOH B . H 3 HOH 42 342 61 HOH HOH B . H 3 HOH 43 343 62 HOH HOH B . H 3 HOH 44 344 63 HOH HOH B . H 3 HOH 45 345 64 HOH HOH B . H 3 HOH 46 346 65 HOH HOH B . H 3 HOH 47 347 68 HOH HOH B . H 3 HOH 48 348 69 HOH HOH B . H 3 HOH 49 349 77 HOH HOH B . H 3 HOH 50 350 78 HOH HOH B . H 3 HOH 51 351 79 HOH HOH B . H 3 HOH 52 352 80 HOH HOH B . H 3 HOH 53 353 81 HOH HOH B . H 3 HOH 54 354 86 HOH HOH B . H 3 HOH 55 355 88 HOH HOH B . H 3 HOH 56 356 89 HOH HOH B . H 3 HOH 57 357 92 HOH HOH B . H 3 HOH 58 358 94 HOH HOH B . H 3 HOH 59 359 95 HOH HOH B . H 3 HOH 60 360 100 HOH HOH B . H 3 HOH 61 361 101 HOH HOH B . H 3 HOH 62 362 102 HOH HOH B . H 3 HOH 63 363 103 HOH HOH B . H 3 HOH 64 364 104 HOH HOH B . H 3 HOH 65 365 105 HOH HOH B . H 3 HOH 66 366 106 HOH HOH B . H 3 HOH 67 367 111 HOH HOH B . H 3 HOH 68 368 112 HOH HOH B . H 3 HOH 69 369 114 HOH HOH B . H 3 HOH 70 370 116 HOH HOH B . H 3 HOH 71 371 117 HOH HOH B . H 3 HOH 72 372 118 HOH HOH B . H 3 HOH 73 373 119 HOH HOH B . H 3 HOH 74 374 120 HOH HOH B . H 3 HOH 75 375 123 HOH HOH B . H 3 HOH 76 376 125 HOH HOH B . H 3 HOH 77 377 126 HOH HOH B . H 3 HOH 78 378 128 HOH HOH B . H 3 HOH 79 379 129 HOH HOH B . H 3 HOH 80 380 130 HOH HOH B . H 3 HOH 81 381 137 HOH HOH B . H 3 HOH 82 382 138 HOH HOH B . H 3 HOH 83 383 140 HOH HOH B . H 3 HOH 84 384 142 HOH HOH B . H 3 HOH 85 385 146 HOH HOH B . H 3 HOH 86 386 147 HOH HOH B . H 3 HOH 87 387 149 HOH HOH B . #