data_4PT4 # _entry.id 4PT4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PT4 pdb_00004pt4 10.2210/pdb4pt4/pdb RCSB RCSB085187 ? ? WWPDB D_1000085187 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2014-05-21 _pdbx_database_PDB_obs_spr.pdb_id 4PT4 _pdbx_database_PDB_obs_spr.replace_pdb_id 3C4I _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4DKY _pdbx_database_related.details ;Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra] ; _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4PT4 _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2014-03-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bhowmick, T.' 1 ? 'Ramagopal, U.A.' 2 ? 'Ghosh, S.' 3 ? 'Nagaraja, V.' 4 ? 'Ramakumar, S.' 5 ? # _citation.id primary _citation.title 'Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors' _citation.journal_abbrev 'Nat Commun' _citation.journal_volume 5 _citation.page_first 4124 _citation.page_last 4124 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-1723 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24916461 _citation.pdbx_database_id_DOI 10.1038/ncomms5124 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bhowmick, T.' 1 ? primary 'Ghosh, S.' 2 ? primary 'Dixit, K.' 3 ? primary 'Ganesan, V.' 4 ? primary 'Ramagopal, U.A.' 5 ? primary 'Dey, D.' 6 ? primary 'Sarma, S.P.' 7 ? primary 'Ramakumar, S.' 8 ? primary 'Nagaraja, V.' 9 ? # _cell.length_a 36.774 _cell.length_b 53.974 _cell.length_c 41.732 _cell.angle_alpha 90.000 _cell.angle_beta 97.010 _cell.angle_gamma 90.000 _cell.entry_id 4PT4 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4PT4 _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding protein HU homolog' 10672.215 2 ? ? 'N terminal UNP residues 1-99 (dimerization domain and DNA binding domain)' ? 2 non-polymer syn 'FORMIC ACID' 46.025 4 ? ? ? ? 3 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Histone-like protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFR PGAQFKAVVSGAQRLPAEG ; _entity_poly.pdbx_seq_one_letter_code_can ;MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFR PGAQFKAVVSGAQRLPAEG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 LYS n 1 4 ALA n 1 5 GLU n 1 6 LEU n 1 7 ILE n 1 8 ASP n 1 9 VAL n 1 10 LEU n 1 11 THR n 1 12 GLN n 1 13 LYS n 1 14 LEU n 1 15 GLY n 1 16 SER n 1 17 ASP n 1 18 ARG n 1 19 ARG n 1 20 GLN n 1 21 ALA n 1 22 THR n 1 23 ALA n 1 24 ALA n 1 25 VAL n 1 26 GLU n 1 27 ASN n 1 28 VAL n 1 29 VAL n 1 30 ASP n 1 31 THR n 1 32 ILE n 1 33 VAL n 1 34 ARG n 1 35 ALA n 1 36 VAL n 1 37 HIS n 1 38 LYS n 1 39 GLY n 1 40 ASP n 1 41 SER n 1 42 VAL n 1 43 THR n 1 44 ILE n 1 45 THR n 1 46 GLY n 1 47 PHE n 1 48 GLY n 1 49 VAL n 1 50 PHE n 1 51 GLU n 1 52 GLN n 1 53 ARG n 1 54 ARG n 1 55 ARG n 1 56 ALA n 1 57 ALA n 1 58 ARG n 1 59 VAL n 1 60 ALA n 1 61 ARG n 1 62 ASN n 1 63 PRO n 1 64 ARG n 1 65 THR n 1 66 GLY n 1 67 GLU n 1 68 THR n 1 69 VAL n 1 70 LYS n 1 71 VAL n 1 72 LYS n 1 73 PRO n 1 74 THR n 1 75 SER n 1 76 VAL n 1 77 PRO n 1 78 ALA n 1 79 PHE n 1 80 ARG n 1 81 PRO n 1 82 GLY n 1 83 ALA n 1 84 GLN n 1 85 PHE n 1 86 LYS n 1 87 ALA n 1 88 VAL n 1 89 VAL n 1 90 SER n 1 91 GLY n 1 92 ALA n 1 93 GLN n 1 94 ARG n 1 95 LEU n 1 96 PRO n 1 97 ALA n 1 98 GLU n 1 99 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 99 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'hupB, MRA_3015' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis H37Ra' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 419947 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET20b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A5U6Z7_MYCTA _struct_ref.pdbx_db_accession A5U6Z7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFR PGAQFKAVVSGAQRLPAEG ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4PT4 A 1 ? 99 ? A5U6Z7 1 ? 99 ? 1 99 2 1 4PT4 B 1 ? 99 ? A5U6Z7 1 ? 99 ? 1 99 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4PT4 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 1.172 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 36.13 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.2 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '3M Sodium formate, 0.1M Tris-Cl, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-11-01 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double Crystal Monochromator (Cryogenically cooled)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.entry_id 4PT4 _reflns.d_resolution_high 2.040 _reflns.d_resolution_low 50.000 _reflns.number_obs 10304 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_netI_over_sigmaI 7.500 _reflns.pdbx_chi_squared 1.078 _reflns.pdbx_redundancy 3.800 _reflns.percent_possible_obs 98.700 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.040 2.120 ? ? ? 0 0.391 ? ? 0.797 3.400 ? ? ? 967 ? ? ? ? 92.900 ? ? 1 1 2.120 2.210 ? ? ? 0 0.343 ? ? 0.901 3.600 ? ? ? 1010 ? ? ? ? 97.500 ? ? 2 1 2.210 2.310 ? ? ? 0 0.274 ? ? 0.961 3.700 ? ? ? 1016 ? ? ? ? 99.100 ? ? 3 1 2.310 2.430 ? ? ? 0 0.244 ? ? 0.926 3.900 ? ? ? 1040 ? ? ? ? 99.500 ? ? 4 1 2.430 2.580 ? ? ? 0 0.204 ? ? 0.985 4.000 ? ? ? 1029 ? ? ? ? 99.600 ? ? 5 1 2.580 2.780 ? ? ? 0 0.150 ? ? 1.023 4.000 ? ? ? 1036 ? ? ? ? 99.500 ? ? 6 1 2.780 3.060 ? ? ? 0 0.102 ? ? 1.128 4.000 ? ? ? 1030 ? ? ? ? 99.700 ? ? 7 1 3.060 3.510 ? ? ? 0 0.077 ? ? 1.220 4.000 ? ? ? 1044 ? ? ? ? 99.800 ? ? 8 1 3.510 4.420 ? ? ? 0 0.060 ? ? 1.310 3.900 ? ? ? 1052 ? ? ? ? 99.800 ? ? 9 1 4.420 50.000 ? ? ? 0 0.061 ? ? 1.433 3.700 ? ? ? 1080 ? ? ? ? 99.800 ? ? 10 1 # _refine.entry_id 4PT4 _refine.ls_d_res_high 2.0400 _refine.ls_d_res_low 41.4200 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.3200 _refine.ls_number_reflns_obs 10291 _refine.ls_number_reflns_all 10468 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1906 _refine.ls_R_factor_R_work 0.1877 _refine.ls_wR_factor_R_work 0.1766 _refine.ls_R_factor_R_free 0.2492 _refine.ls_wR_factor_R_free 0.2366 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_number_reflns_R_free 491 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 34.753 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -2.0000 _refine.aniso_B[2][2] -1.8200 _refine.aniso_B[3][3] 3.4400 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 1.1400 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9570 _refine.correlation_coeff_Fo_to_Fc_free 0.9230 _refine.overall_SU_R_Cruickshank_DPI 0.2594 _refine.overall_SU_R_free 0.2072 _refine.pdbx_overall_ESU_R 0.2590 _refine.pdbx_overall_ESU_R_Free 0.2070 _refine.overall_SU_ML 0.1830 _refine.overall_SU_B 15.7530 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 1P71' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7719 _refine.B_iso_max 82.190 _refine.B_iso_min 18.770 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4PT4 _refine_analyze.Luzzati_coordinate_error_obs 0.249 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1465 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 1563 _refine_hist.d_res_high 2.0400 _refine_hist.d_res_low 41.4200 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1491 0.011 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1507 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2009 1.477 1.958 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3432 0.771 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 194 5.884 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 61 38.000 21.803 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 252 15.034 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20 16.813 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 239 0.082 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1700 0.006 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 344 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 782 2.079 3.047 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 783 2.077 3.048 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 974 3.154 4.555 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.0370 _refine_ls_shell.d_res_low 2.0900 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 85.6600 _refine_ls_shell.number_reflns_R_work 618 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2710 _refine_ls_shell.R_factor_R_free 0.3070 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 651 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4PT4 _struct.title ;Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra] ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PT4 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'DIMERIZATION BY FOUR HELIX BUNDLE INTERACTION, DNA condensation, DNA-binding, DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? GLY A 15 ? ASN A 2 GLY A 15 1 ? 14 HELX_P HELX_P2 2 ASP A 17 ? LYS A 38 ? ASP A 17 LYS A 38 1 ? 22 HELX_P HELX_P3 3 GLY A 82 ? SER A 90 ? GLY A 82 SER A 90 1 ? 9 HELX_P HELX_P4 4 ASN B 2 ? GLY B 15 ? ASN B 2 GLY B 15 1 ? 14 HELX_P HELX_P5 5 ASP B 17 ? LYS B 38 ? ASP B 17 LYS B 38 1 ? 22 HELX_P HELX_P6 6 GLY B 82 ? SER B 90 ? GLY B 82 SER B 90 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 42 ? ILE A 44 ? VAL A 42 ILE A 44 A 2 GLY A 48 ? ARG A 55 ? GLY A 48 ARG A 55 A 3 THR A 74 ? PRO A 81 ? THR A 74 PRO A 81 B 1 ARG A 58 ? ARG A 61 ? ARG A 58 ARG A 61 B 2 THR A 68 ? VAL A 71 ? THR A 68 VAL A 71 C 1 VAL B 42 ? ILE B 44 ? VAL B 42 ILE B 44 C 2 GLY B 48 ? ARG B 55 ? GLY B 48 ARG B 55 C 3 THR B 74 ? PRO B 81 ? THR B 74 PRO B 81 D 1 ARG B 58 ? ARG B 61 ? ARG B 58 ARG B 61 D 2 THR B 68 ? VAL B 71 ? THR B 68 VAL B 71 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 42 ? N VAL A 42 O PHE A 50 ? O PHE A 50 A 2 3 N ARG A 55 ? N ARG A 55 O THR A 74 ? O THR A 74 B 1 2 N ALA A 60 ? N ALA A 60 O VAL A 69 ? O VAL A 69 C 1 2 N ILE B 44 ? N ILE B 44 O GLY B 48 ? O GLY B 48 C 2 3 N ARG B 53 ? N ARG B 53 O VAL B 76 ? O VAL B 76 D 1 2 N ALA B 60 ? N ALA B 60 O VAL B 69 ? O VAL B 69 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMT 100 ? 1 'BINDING SITE FOR RESIDUE FMT A 100' AC2 Software A FMT 101 ? 1 'BINDING SITE FOR RESIDUE FMT A 101' AC3 Software B FMT 100 ? 2 'BINDING SITE FOR RESIDUE FMT B 100' AC4 Software B FMT 101 ? 5 'BINDING SITE FOR RESIDUE FMT B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 ARG B 54 ? ARG B 54 . ? 1_655 ? 2 AC2 1 LYS A 72 ? LYS A 72 . ? 1_656 ? 3 AC3 2 HOH H . ? HOH B 217 . ? 1_555 ? 4 AC3 2 HOH H . ? HOH B 228 . ? 1_555 ? 5 AC4 5 ARG B 55 ? ARG B 55 . ? 1_555 ? 6 AC4 5 ARG B 58 ? ARG B 58 . ? 1_555 ? 7 AC4 5 VAL B 71 ? VAL B 71 . ? 1_555 ? 8 AC4 5 LYS B 72 ? LYS B 72 . ? 1_555 ? 9 AC4 5 THR B 74 ? THR B 74 . ? 1_555 ? # _atom_sites.entry_id 4PT4 _atom_sites.fract_transf_matrix[1][1] 0.027193 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003342 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018527 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024143 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 GLY 99 99 99 GLY GLY A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 ASN 2 2 2 ASN ASN B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 GLN 12 12 12 GLN GLN B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 GLN 20 20 20 GLN GLN B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 HIS 37 37 37 HIS HIS B . n B 1 38 LYS 38 38 38 LYS LYS B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 GLN 52 52 52 GLN GLN B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 ARG 55 55 55 ARG ARG B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 ASN 62 62 62 ASN ASN B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 ARG 64 64 64 ARG ARG B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 GLY 66 66 66 GLY GLY B . n B 1 67 GLU 67 67 67 GLU GLU B . n B 1 68 THR 68 68 68 THR THR B . n B 1 69 VAL 69 69 69 VAL VAL B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 LYS 72 72 72 LYS LYS B . n B 1 73 PRO 73 73 73 PRO PRO B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 SER 75 75 75 SER SER B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 PRO 77 77 77 PRO PRO B . n B 1 78 ALA 78 78 78 ALA ALA B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 ALA 83 83 83 ALA ALA B . n B 1 84 GLN 84 84 84 GLN GLN B . n B 1 85 PHE 85 85 85 PHE PHE B . n B 1 86 LYS 86 86 86 LYS LYS B . n B 1 87 ALA 87 87 87 ALA ALA B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 VAL 89 89 89 VAL VAL B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 GLY 91 91 91 GLY GLY B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 GLN 93 93 93 GLN GLN B . n B 1 94 ARG 94 94 94 ARG ARG B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 PRO 96 96 96 PRO PRO B . n B 1 97 ALA 97 97 97 ALA ALA B . n B 1 98 GLU 98 98 ? ? ? B . n B 1 99 GLY 99 99 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMT 1 100 100 FMT FMT A . D 2 FMT 1 101 101 FMT FMT A . E 2 FMT 1 100 100 FMT FMT B . F 2 FMT 1 101 101 FMT FMT B . G 3 HOH 1 201 102 HOH HOH A . G 3 HOH 2 202 103 HOH HOH A . G 3 HOH 3 203 104 HOH HOH A . G 3 HOH 4 204 105 HOH HOH A . G 3 HOH 5 205 106 HOH HOH A . G 3 HOH 6 206 107 HOH HOH A . G 3 HOH 7 207 108 HOH HOH A . G 3 HOH 8 208 109 HOH HOH A . G 3 HOH 9 209 110 HOH HOH A . G 3 HOH 10 210 111 HOH HOH A . G 3 HOH 11 211 112 HOH HOH A . G 3 HOH 12 212 113 HOH HOH A . G 3 HOH 13 213 114 HOH HOH A . G 3 HOH 14 214 115 HOH HOH A . G 3 HOH 15 215 116 HOH HOH A . G 3 HOH 16 216 117 HOH HOH A . G 3 HOH 17 217 118 HOH HOH A . G 3 HOH 18 218 119 HOH HOH A . G 3 HOH 19 219 120 HOH HOH A . G 3 HOH 20 220 121 HOH HOH A . G 3 HOH 21 221 122 HOH HOH A . G 3 HOH 22 222 123 HOH HOH A . G 3 HOH 23 223 124 HOH HOH A . G 3 HOH 24 224 125 HOH HOH A . G 3 HOH 25 225 126 HOH HOH A . G 3 HOH 26 226 127 HOH HOH A . G 3 HOH 27 227 128 HOH HOH A . G 3 HOH 28 228 129 HOH HOH A . G 3 HOH 29 229 130 HOH HOH A . G 3 HOH 30 230 131 HOH HOH A . G 3 HOH 31 231 132 HOH HOH A . G 3 HOH 32 232 133 HOH HOH A . G 3 HOH 33 233 134 HOH HOH A . G 3 HOH 34 234 135 HOH HOH A . G 3 HOH 35 235 136 HOH HOH A . G 3 HOH 36 236 137 HOH HOH A . G 3 HOH 37 237 138 HOH HOH A . G 3 HOH 38 238 139 HOH HOH A . G 3 HOH 39 239 140 HOH HOH A . G 3 HOH 40 240 141 HOH HOH A . G 3 HOH 41 241 142 HOH HOH A . G 3 HOH 42 242 143 HOH HOH A . G 3 HOH 43 243 144 HOH HOH A . G 3 HOH 44 244 145 HOH HOH A . H 3 HOH 1 201 102 HOH HOH B . H 3 HOH 2 202 103 HOH HOH B . H 3 HOH 3 203 104 HOH HOH B . H 3 HOH 4 204 105 HOH HOH B . H 3 HOH 5 205 106 HOH HOH B . H 3 HOH 6 206 107 HOH HOH B . H 3 HOH 7 207 108 HOH HOH B . H 3 HOH 8 208 109 HOH HOH B . H 3 HOH 9 209 110 HOH HOH B . H 3 HOH 10 210 111 HOH HOH B . H 3 HOH 11 211 112 HOH HOH B . H 3 HOH 12 212 113 HOH HOH B . H 3 HOH 13 213 114 HOH HOH B . H 3 HOH 14 214 115 HOH HOH B . H 3 HOH 15 215 116 HOH HOH B . H 3 HOH 16 216 117 HOH HOH B . H 3 HOH 17 217 118 HOH HOH B . H 3 HOH 18 218 119 HOH HOH B . H 3 HOH 19 219 120 HOH HOH B . H 3 HOH 20 220 121 HOH HOH B . H 3 HOH 21 221 122 HOH HOH B . H 3 HOH 22 222 123 HOH HOH B . H 3 HOH 23 223 124 HOH HOH B . H 3 HOH 24 224 125 HOH HOH B . H 3 HOH 25 225 126 HOH HOH B . H 3 HOH 26 226 127 HOH HOH B . H 3 HOH 27 227 128 HOH HOH B . H 3 HOH 28 228 129 HOH HOH B . H 3 HOH 29 229 130 HOH HOH B . H 3 HOH 30 230 131 HOH HOH B . H 3 HOH 31 231 132 HOH HOH B . H 3 HOH 32 232 133 HOH HOH B . H 3 HOH 33 233 134 HOH HOH B . H 3 HOH 34 234 135 HOH HOH B . H 3 HOH 35 235 136 HOH HOH B . H 3 HOH 36 236 137 HOH HOH B . H 3 HOH 37 237 138 HOH HOH B . H 3 HOH 38 238 139 HOH HOH B . H 3 HOH 39 239 140 HOH HOH B . H 3 HOH 40 240 141 HOH HOH B . H 3 HOH 41 241 142 HOH HOH B . H 3 HOH 42 242 143 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4360 ? 1 MORE -39 ? 1 'SSA (A^2)' 11790 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-21 2 'Structure model' 1 1 2014-08-27 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2023-07-26 5 'Structure model' 1 4 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Source and taxonomy' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' entity_name_com 4 4 'Structure model' entity_src_gen 5 4 'Structure model' pdbx_database_related 6 4 'Structure model' struct 7 4 'Structure model' struct_ref 8 4 'Structure model' struct_ref_seq 9 4 'Structure model' struct_site 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond 12 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_entity_name_com.name' 5 4 'Structure model' '_entity_src_gen.gene_src_strain' 6 4 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 7 4 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 8 4 'Structure model' '_entity_src_gen.pdbx_gene_src_gene' 9 4 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 10 4 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 11 4 'Structure model' '_entity_src_gen.pdbx_seq_type' 12 4 'Structure model' '_pdbx_database_related.details' 13 4 'Structure model' '_struct.title' 14 4 'Structure model' '_struct_ref.db_code' 15 4 'Structure model' '_struct_ref.pdbx_db_accession' 16 4 'Structure model' '_struct_ref_seq.pdbx_db_accession' 17 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 16.5151 9.0224 -2.3187 0.0262 0.0176 0.0025 -0.0044 0.0016 -0.0063 0.4088 0.0342 0.1783 -0.0293 0.1715 -0.0639 -0.0034 0.0107 -0.0073 0.0301 -0.0207 -0.0023 0.0020 -0.0114 0.0077 'X-RAY DIFFRACTION' 2 ? refined 16.2230 6.1112 2.5959 0.0197 0.0193 0.0038 -0.0026 0.0031 0.0004 0.5462 0.0284 0.0757 -0.0436 -0.0158 0.0238 -0.0262 0.0143 0.0119 -0.0334 0.0245 -0.0009 0.0103 0.0188 0.0227 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 244 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 1 B 242 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC 5.8.0049 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 CBASS . ? ? ? ? 'data collection' ? ? ? 5 DENZO . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 62 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -59.33 _pdbx_validate_torsion.psi 104.57 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 93 ? CG ? A GLN 93 CG 2 1 Y 1 A GLN 93 ? CD ? A GLN 93 CD 3 1 Y 1 A GLN 93 ? OE1 ? A GLN 93 OE1 4 1 Y 1 A GLN 93 ? NE2 ? A GLN 93 NE2 5 1 Y 1 A ARG 94 ? CG ? A ARG 94 CG 6 1 Y 1 A ARG 94 ? CD ? A ARG 94 CD 7 1 Y 1 A ARG 94 ? NE ? A ARG 94 NE 8 1 Y 1 A ARG 94 ? CZ ? A ARG 94 CZ 9 1 Y 1 A ARG 94 ? NH1 ? A ARG 94 NH1 10 1 Y 1 A ARG 94 ? NH2 ? A ARG 94 NH2 11 1 Y 1 B GLN 93 ? CG ? B GLN 93 CG 12 1 Y 1 B GLN 93 ? CD ? B GLN 93 CD 13 1 Y 1 B GLN 93 ? OE1 ? B GLN 93 OE1 14 1 Y 1 B GLN 93 ? NE2 ? B GLN 93 NE2 15 1 Y 1 B ARG 94 ? CG ? B ARG 94 CG 16 1 Y 1 B ARG 94 ? CD ? B ARG 94 CD 17 1 Y 1 B ARG 94 ? NE ? B ARG 94 NE 18 1 Y 1 B ARG 94 ? CZ ? B ARG 94 CZ 19 1 Y 1 B ARG 94 ? NH1 ? B ARG 94 NH1 20 1 Y 1 B ARG 94 ? NH2 ? B ARG 94 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLU 98 ? B GLU 98 2 1 Y 1 B GLY 99 ? B GLY 99 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 FMT C C N N 74 FMT O1 O N N 75 FMT O2 O N N 76 FMT H H N N 77 FMT HO2 H N N 78 GLN N N N N 79 GLN CA C N S 80 GLN C C N N 81 GLN O O N N 82 GLN CB C N N 83 GLN CG C N N 84 GLN CD C N N 85 GLN OE1 O N N 86 GLN NE2 N N N 87 GLN OXT O N N 88 GLN H H N N 89 GLN H2 H N N 90 GLN HA H N N 91 GLN HB2 H N N 92 GLN HB3 H N N 93 GLN HG2 H N N 94 GLN HG3 H N N 95 GLN HE21 H N N 96 GLN HE22 H N N 97 GLN HXT H N N 98 GLU N N N N 99 GLU CA C N S 100 GLU C C N N 101 GLU O O N N 102 GLU CB C N N 103 GLU CG C N N 104 GLU CD C N N 105 GLU OE1 O N N 106 GLU OE2 O N N 107 GLU OXT O N N 108 GLU H H N N 109 GLU H2 H N N 110 GLU HA H N N 111 GLU HB2 H N N 112 GLU HB3 H N N 113 GLU HG2 H N N 114 GLU HG3 H N N 115 GLU HE2 H N N 116 GLU HXT H N N 117 GLY N N N N 118 GLY CA C N N 119 GLY C C N N 120 GLY O O N N 121 GLY OXT O N N 122 GLY H H N N 123 GLY H2 H N N 124 GLY HA2 H N N 125 GLY HA3 H N N 126 GLY HXT H N N 127 HIS N N N N 128 HIS CA C N S 129 HIS C C N N 130 HIS O O N N 131 HIS CB C N N 132 HIS CG C Y N 133 HIS ND1 N Y N 134 HIS CD2 C Y N 135 HIS CE1 C Y N 136 HIS NE2 N Y N 137 HIS OXT O N N 138 HIS H H N N 139 HIS H2 H N N 140 HIS HA H N N 141 HIS HB2 H N N 142 HIS HB3 H N N 143 HIS HD1 H N N 144 HIS HD2 H N N 145 HIS HE1 H N N 146 HIS HE2 H N N 147 HIS HXT H N N 148 HOH O O N N 149 HOH H1 H N N 150 HOH H2 H N N 151 ILE N N N N 152 ILE CA C N S 153 ILE C C N N 154 ILE O O N N 155 ILE CB C N S 156 ILE CG1 C N N 157 ILE CG2 C N N 158 ILE CD1 C N N 159 ILE OXT O N N 160 ILE H H N N 161 ILE H2 H N N 162 ILE HA H N N 163 ILE HB H N N 164 ILE HG12 H N N 165 ILE HG13 H N N 166 ILE HG21 H N N 167 ILE HG22 H N N 168 ILE HG23 H N N 169 ILE HD11 H N N 170 ILE HD12 H N N 171 ILE HD13 H N N 172 ILE HXT H N N 173 LEU N N N N 174 LEU CA C N S 175 LEU C C N N 176 LEU O O N N 177 LEU CB C N N 178 LEU CG C N N 179 LEU CD1 C N N 180 LEU CD2 C N N 181 LEU OXT O N N 182 LEU H H N N 183 LEU H2 H N N 184 LEU HA H N N 185 LEU HB2 H N N 186 LEU HB3 H N N 187 LEU HG H N N 188 LEU HD11 H N N 189 LEU HD12 H N N 190 LEU HD13 H N N 191 LEU HD21 H N N 192 LEU HD22 H N N 193 LEU HD23 H N N 194 LEU HXT H N N 195 LYS N N N N 196 LYS CA C N S 197 LYS C C N N 198 LYS O O N N 199 LYS CB C N N 200 LYS CG C N N 201 LYS CD C N N 202 LYS CE C N N 203 LYS NZ N N N 204 LYS OXT O N N 205 LYS H H N N 206 LYS H2 H N N 207 LYS HA H N N 208 LYS HB2 H N N 209 LYS HB3 H N N 210 LYS HG2 H N N 211 LYS HG3 H N N 212 LYS HD2 H N N 213 LYS HD3 H N N 214 LYS HE2 H N N 215 LYS HE3 H N N 216 LYS HZ1 H N N 217 LYS HZ2 H N N 218 LYS HZ3 H N N 219 LYS HXT H N N 220 MET N N N N 221 MET CA C N S 222 MET C C N N 223 MET O O N N 224 MET CB C N N 225 MET CG C N N 226 MET SD S N N 227 MET CE C N N 228 MET OXT O N N 229 MET H H N N 230 MET H2 H N N 231 MET HA H N N 232 MET HB2 H N N 233 MET HB3 H N N 234 MET HG2 H N N 235 MET HG3 H N N 236 MET HE1 H N N 237 MET HE2 H N N 238 MET HE3 H N N 239 MET HXT H N N 240 PHE N N N N 241 PHE CA C N S 242 PHE C C N N 243 PHE O O N N 244 PHE CB C N N 245 PHE CG C Y N 246 PHE CD1 C Y N 247 PHE CD2 C Y N 248 PHE CE1 C Y N 249 PHE CE2 C Y N 250 PHE CZ C Y N 251 PHE OXT O N N 252 PHE H H N N 253 PHE H2 H N N 254 PHE HA H N N 255 PHE HB2 H N N 256 PHE HB3 H N N 257 PHE HD1 H N N 258 PHE HD2 H N N 259 PHE HE1 H N N 260 PHE HE2 H N N 261 PHE HZ H N N 262 PHE HXT H N N 263 PRO N N N N 264 PRO CA C N S 265 PRO C C N N 266 PRO O O N N 267 PRO CB C N N 268 PRO CG C N N 269 PRO CD C N N 270 PRO OXT O N N 271 PRO H H N N 272 PRO HA H N N 273 PRO HB2 H N N 274 PRO HB3 H N N 275 PRO HG2 H N N 276 PRO HG3 H N N 277 PRO HD2 H N N 278 PRO HD3 H N N 279 PRO HXT H N N 280 SER N N N N 281 SER CA C N S 282 SER C C N N 283 SER O O N N 284 SER CB C N N 285 SER OG O N N 286 SER OXT O N N 287 SER H H N N 288 SER H2 H N N 289 SER HA H N N 290 SER HB2 H N N 291 SER HB3 H N N 292 SER HG H N N 293 SER HXT H N N 294 THR N N N N 295 THR CA C N S 296 THR C C N N 297 THR O O N N 298 THR CB C N R 299 THR OG1 O N N 300 THR CG2 C N N 301 THR OXT O N N 302 THR H H N N 303 THR H2 H N N 304 THR HA H N N 305 THR HB H N N 306 THR HG1 H N N 307 THR HG21 H N N 308 THR HG22 H N N 309 THR HG23 H N N 310 THR HXT H N N 311 VAL N N N N 312 VAL CA C N S 313 VAL C C N N 314 VAL O O N N 315 VAL CB C N N 316 VAL CG1 C N N 317 VAL CG2 C N N 318 VAL OXT O N N 319 VAL H H N N 320 VAL H2 H N N 321 VAL HA H N N 322 VAL HB H N N 323 VAL HG11 H N N 324 VAL HG12 H N N 325 VAL HG13 H N N 326 VAL HG21 H N N 327 VAL HG22 H N N 328 VAL HG23 H N N 329 VAL HXT H N N 330 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 FMT C O1 doub N N 70 FMT C O2 sing N N 71 FMT C H sing N N 72 FMT O2 HO2 sing N N 73 GLN N CA sing N N 74 GLN N H sing N N 75 GLN N H2 sing N N 76 GLN CA C sing N N 77 GLN CA CB sing N N 78 GLN CA HA sing N N 79 GLN C O doub N N 80 GLN C OXT sing N N 81 GLN CB CG sing N N 82 GLN CB HB2 sing N N 83 GLN CB HB3 sing N N 84 GLN CG CD sing N N 85 GLN CG HG2 sing N N 86 GLN CG HG3 sing N N 87 GLN CD OE1 doub N N 88 GLN CD NE2 sing N N 89 GLN NE2 HE21 sing N N 90 GLN NE2 HE22 sing N N 91 GLN OXT HXT sing N N 92 GLU N CA sing N N 93 GLU N H sing N N 94 GLU N H2 sing N N 95 GLU CA C sing N N 96 GLU CA CB sing N N 97 GLU CA HA sing N N 98 GLU C O doub N N 99 GLU C OXT sing N N 100 GLU CB CG sing N N 101 GLU CB HB2 sing N N 102 GLU CB HB3 sing N N 103 GLU CG CD sing N N 104 GLU CG HG2 sing N N 105 GLU CG HG3 sing N N 106 GLU CD OE1 doub N N 107 GLU CD OE2 sing N N 108 GLU OE2 HE2 sing N N 109 GLU OXT HXT sing N N 110 GLY N CA sing N N 111 GLY N H sing N N 112 GLY N H2 sing N N 113 GLY CA C sing N N 114 GLY CA HA2 sing N N 115 GLY CA HA3 sing N N 116 GLY C O doub N N 117 GLY C OXT sing N N 118 GLY OXT HXT sing N N 119 HIS N CA sing N N 120 HIS N H sing N N 121 HIS N H2 sing N N 122 HIS CA C sing N N 123 HIS CA CB sing N N 124 HIS CA HA sing N N 125 HIS C O doub N N 126 HIS C OXT sing N N 127 HIS CB CG sing N N 128 HIS CB HB2 sing N N 129 HIS CB HB3 sing N N 130 HIS CG ND1 sing Y N 131 HIS CG CD2 doub Y N 132 HIS ND1 CE1 doub Y N 133 HIS ND1 HD1 sing N N 134 HIS CD2 NE2 sing Y N 135 HIS CD2 HD2 sing N N 136 HIS CE1 NE2 sing Y N 137 HIS CE1 HE1 sing N N 138 HIS NE2 HE2 sing N N 139 HIS OXT HXT sing N N 140 HOH O H1 sing N N 141 HOH O H2 sing N N 142 ILE N CA sing N N 143 ILE N H sing N N 144 ILE N H2 sing N N 145 ILE CA C sing N N 146 ILE CA CB sing N N 147 ILE CA HA sing N N 148 ILE C O doub N N 149 ILE C OXT sing N N 150 ILE CB CG1 sing N N 151 ILE CB CG2 sing N N 152 ILE CB HB sing N N 153 ILE CG1 CD1 sing N N 154 ILE CG1 HG12 sing N N 155 ILE CG1 HG13 sing N N 156 ILE CG2 HG21 sing N N 157 ILE CG2 HG22 sing N N 158 ILE CG2 HG23 sing N N 159 ILE CD1 HD11 sing N N 160 ILE CD1 HD12 sing N N 161 ILE CD1 HD13 sing N N 162 ILE OXT HXT sing N N 163 LEU N CA sing N N 164 LEU N H sing N N 165 LEU N H2 sing N N 166 LEU CA C sing N N 167 LEU CA CB sing N N 168 LEU CA HA sing N N 169 LEU C O doub N N 170 LEU C OXT sing N N 171 LEU CB CG sing N N 172 LEU CB HB2 sing N N 173 LEU CB HB3 sing N N 174 LEU CG CD1 sing N N 175 LEU CG CD2 sing N N 176 LEU CG HG sing N N 177 LEU CD1 HD11 sing N N 178 LEU CD1 HD12 sing N N 179 LEU CD1 HD13 sing N N 180 LEU CD2 HD21 sing N N 181 LEU CD2 HD22 sing N N 182 LEU CD2 HD23 sing N N 183 LEU OXT HXT sing N N 184 LYS N CA sing N N 185 LYS N H sing N N 186 LYS N H2 sing N N 187 LYS CA C sing N N 188 LYS CA CB sing N N 189 LYS CA HA sing N N 190 LYS C O doub N N 191 LYS C OXT sing N N 192 LYS CB CG sing N N 193 LYS CB HB2 sing N N 194 LYS CB HB3 sing N N 195 LYS CG CD sing N N 196 LYS CG HG2 sing N N 197 LYS CG HG3 sing N N 198 LYS CD CE sing N N 199 LYS CD HD2 sing N N 200 LYS CD HD3 sing N N 201 LYS CE NZ sing N N 202 LYS CE HE2 sing N N 203 LYS CE HE3 sing N N 204 LYS NZ HZ1 sing N N 205 LYS NZ HZ2 sing N N 206 LYS NZ HZ3 sing N N 207 LYS OXT HXT sing N N 208 MET N CA sing N N 209 MET N H sing N N 210 MET N H2 sing N N 211 MET CA C sing N N 212 MET CA CB sing N N 213 MET CA HA sing N N 214 MET C O doub N N 215 MET C OXT sing N N 216 MET CB CG sing N N 217 MET CB HB2 sing N N 218 MET CB HB3 sing N N 219 MET CG SD sing N N 220 MET CG HG2 sing N N 221 MET CG HG3 sing N N 222 MET SD CE sing N N 223 MET CE HE1 sing N N 224 MET CE HE2 sing N N 225 MET CE HE3 sing N N 226 MET OXT HXT sing N N 227 PHE N CA sing N N 228 PHE N H sing N N 229 PHE N H2 sing N N 230 PHE CA C sing N N 231 PHE CA CB sing N N 232 PHE CA HA sing N N 233 PHE C O doub N N 234 PHE C OXT sing N N 235 PHE CB CG sing N N 236 PHE CB HB2 sing N N 237 PHE CB HB3 sing N N 238 PHE CG CD1 doub Y N 239 PHE CG CD2 sing Y N 240 PHE CD1 CE1 sing Y N 241 PHE CD1 HD1 sing N N 242 PHE CD2 CE2 doub Y N 243 PHE CD2 HD2 sing N N 244 PHE CE1 CZ doub Y N 245 PHE CE1 HE1 sing N N 246 PHE CE2 CZ sing Y N 247 PHE CE2 HE2 sing N N 248 PHE CZ HZ sing N N 249 PHE OXT HXT sing N N 250 PRO N CA sing N N 251 PRO N CD sing N N 252 PRO N H sing N N 253 PRO CA C sing N N 254 PRO CA CB sing N N 255 PRO CA HA sing N N 256 PRO C O doub N N 257 PRO C OXT sing N N 258 PRO CB CG sing N N 259 PRO CB HB2 sing N N 260 PRO CB HB3 sing N N 261 PRO CG CD sing N N 262 PRO CG HG2 sing N N 263 PRO CG HG3 sing N N 264 PRO CD HD2 sing N N 265 PRO CD HD3 sing N N 266 PRO OXT HXT sing N N 267 SER N CA sing N N 268 SER N H sing N N 269 SER N H2 sing N N 270 SER CA C sing N N 271 SER CA CB sing N N 272 SER CA HA sing N N 273 SER C O doub N N 274 SER C OXT sing N N 275 SER CB OG sing N N 276 SER CB HB2 sing N N 277 SER CB HB3 sing N N 278 SER OG HG sing N N 279 SER OXT HXT sing N N 280 THR N CA sing N N 281 THR N H sing N N 282 THR N H2 sing N N 283 THR CA C sing N N 284 THR CA CB sing N N 285 THR CA HA sing N N 286 THR C O doub N N 287 THR C OXT sing N N 288 THR CB OG1 sing N N 289 THR CB CG2 sing N N 290 THR CB HB sing N N 291 THR OG1 HG1 sing N N 292 THR CG2 HG21 sing N N 293 THR CG2 HG22 sing N N 294 THR CG2 HG23 sing N N 295 THR OXT HXT sing N N 296 VAL N CA sing N N 297 VAL N H sing N N 298 VAL N H2 sing N N 299 VAL CA C sing N N 300 VAL CA CB sing N N 301 VAL CA HA sing N N 302 VAL C O doub N N 303 VAL C OXT sing N N 304 VAL CB CG1 sing N N 305 VAL CB CG2 sing N N 306 VAL CB HB sing N N 307 VAL CG1 HG11 sing N N 308 VAL CG1 HG12 sing N N 309 VAL CG1 HG13 sing N N 310 VAL CG2 HG21 sing N N 311 VAL CG2 HG22 sing N N 312 VAL CG2 HG23 sing N N 313 VAL OXT HXT sing N N 314 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1P71 _pdbx_initial_refinement_model.details 'PDB ENTRY 1P71' #