HEADER IMMUNE SYSTEM 12-MAR-14 4PUB TITLE CRYSTAL STRUCTURE OF FAB DX-2930 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DX-2930 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DX-2930 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FAB, ANTIBODY, KALLIKREIN, BLOOD, PLASMA, PLASMA KALLIKREIN-MEDIATED KEYWDS 2 EDEMA, ACUTE HEREDITARY ANGIOEDEMA, HAE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.ABENDROTH,T.E.EDWARDS,A.NIXON,R.LADNER REVDAT 3 20-SEP-23 4PUB 1 REMARK REVDAT 2 10-SEP-14 4PUB 1 JRNL REVDAT 1 09-JUL-14 4PUB 0 JRNL AUTH J.A.KENNISTON,R.R.FAUCETTE,D.MARTIK,S.R.COMEAU,A.P.LINDBERG, JRNL AUTH 2 K.J.KOPACZ,G.P.CONLEY,J.CHEN,M.VISWANATHAN,N.KASTRAPELI, JRNL AUTH 3 J.COSIC,S.MASON,M.DILEO,J.ABENDROTH,P.KUZMIC,R.C.LADNER, JRNL AUTH 4 T.E.EDWARDS,C.TENHOOR,B.A.ADELMAN,A.E.NIXON,D.J.SEXTON JRNL TITL INHIBITION OF PLASMA KALLIKREIN BY A HIGHLY SPECIFIC ACTIVE JRNL TITL 2 SITE BLOCKING ANTIBODY. JRNL REF J.BIOL.CHEM. V. 289 23596 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 24970892 JRNL DOI 10.1074/JBC.M114.569061 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 42901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2167 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2977 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 160 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3154 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 479 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : -0.59000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.116 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.115 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.575 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3278 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2982 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4489 ; 1.594 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6877 ; 0.822 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 439 ; 6.954 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 122 ;38.320 ;24.098 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 503 ;13.619 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;21.205 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 515 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3767 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 739 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1711 ; 1.351 ; 1.328 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1710 ; 1.345 ; 1.326 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2135 ; 2.258 ; 1.976 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 2 H 223 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3360 5.7720 21.0630 REMARK 3 T TENSOR REMARK 3 T11: 0.0969 T22: 0.0075 REMARK 3 T33: 0.0640 T12: 0.0161 REMARK 3 T13: 0.0154 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.6596 L22: 0.9916 REMARK 3 L33: 0.4733 L12: 0.4388 REMARK 3 L13: 0.1097 L23: 0.2814 REMARK 3 S TENSOR REMARK 3 S11: -0.0296 S12: 0.0130 S13: -0.0768 REMARK 3 S21: -0.0276 S22: 0.0504 S23: -0.0998 REMARK 3 S31: -0.0026 S32: 0.0111 S33: -0.0209 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 212 REMARK 3 ORIGIN FOR THE GROUP (A): 3.0820 14.0550 16.4500 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.0220 REMARK 3 T33: 0.0483 T12: 0.0127 REMARK 3 T13: 0.0224 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.5816 L22: 0.6457 REMARK 3 L33: 0.0356 L12: 0.0811 REMARK 3 L13: -0.0516 L23: -0.0560 REMARK 3 S TENSOR REMARK 3 S11: -0.0500 S12: 0.0092 S13: 0.0075 REMARK 3 S21: 0.0361 S22: 0.0758 S23: 0.0778 REMARK 3 S31: -0.0330 S32: -0.0154 S33: -0.0258 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4PUB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085227. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97982 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42967 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.47100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: PDB ENTRY 4OGX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: FAB DX-2930 AT 268 UM OR 12.7 MG/ML REMARK 280 AGAINST JCSG SCREEN CONDITION H3 AND ADDITIVE SCREEN 25% PEG- REMARK 280 3350, 0.1 M BISTRIS PH 5.5, 0.1 M SODIUM CITRATE PH 4.5, 3% V/V REMARK 280 DMSO, SUPPLEMENTED WITH 15% V/V ETHYLENE GLYCOL AS CRYO- REMARK 280 PROTECTANT, PUCK ID TOZ7-6, CRYSTAL TRACKING ID 243341C6, VAPOR REMARK 280 DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.96500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.24500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.27000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.24500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.96500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.27000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU H 1 REMARK 465 PHE H 27 REMARK 465 THR H 28 REMARK 465 PHE H 29 REMARK 465 SER H 30 REMARK 465 SER H 53 REMARK 465 SER H 54 REMARK 465 GLY H 102 REMARK 465 VAL H 103 REMARK 465 PRO H 104 REMARK 465 ARG H 105 REMARK 465 SER H 224 REMARK 465 CYS H 225 REMARK 465 CYS L 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL H 2 CG1 CG2 REMARK 470 HIS H 31 CG ND1 CD2 CE1 NE2 REMARK 470 TYR H 32 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG H 72 CG CD NE CZ NH1 NH2 REMARK 470 LYS H 76 CG CD CE NZ REMARK 470 ILE H 101 CG1 CG2 CD1 REMARK 470 ARG H 106 CG CD NE CZ NH1 NH2 REMARK 470 ASP H 107 CG OD1 OD2 REMARK 470 GLU H 108 CG CD OE1 OE2 REMARK 470 GLN H 114 CG CD OE1 NE2 REMARK 470 LYS H 138 CG CD CE NZ REMARK 470 SER H 141 OG REMARK 470 THR H 200 OG1 CG2 REMARK 470 LYS H 210 CG CD CE NZ REMARK 470 ASP L 1 CG OD1 OD2 REMARK 470 LYS L 45 CG CD CE NZ REMARK 470 LYS L 125 CG CD CE NZ REMARK 470 LYS L 168 CG CD CE NZ REMARK 470 LYS L 189 CG CD CE NZ REMARK 470 GLU L 212 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN H 208 O HOH H 507 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP H 153 54.60 74.32 REMARK 500 SER L 30 -118.93 52.37 REMARK 500 ALA L 51 -35.41 65.55 REMARK 500 ALA L 84 -177.25 -176.31 REMARK 500 TYR L 94 -143.07 55.99 REMARK 500 SER L 170 19.33 58.58 REMARK 500 LYS L 189 -62.68 -100.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL H 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OGX RELATED DB: PDB REMARK 900 DX-2930 FAB/PLASMA KALLIKREIN COMPLEX OP CRYSTAL FORM REMARK 900 RELATED ID: 4OGY RELATED DB: PDB REMARK 900 DX-2930 FAB/PLASMA KALLIKREIN COMPLEX MP CRYSTAL FORM DBREF 4PUB H 1 225 PDB 4PUB 4PUB 1 225 DBREF 4PUB L 1 213 PDB 4PUB 4PUB 1 213 SEQRES 1 H 225 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 225 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 225 PHE THR PHE SER HIS TYR ILE MET MET TRP VAL ARG GLN SEQRES 4 H 225 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE TYR SEQRES 5 H 225 SER SER GLY GLY ILE THR VAL TYR ALA ASP SER VAL LYS SEQRES 6 H 225 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 225 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 225 ALA VAL TYR TYR CYS ALA TYR ARG ARG ILE GLY VAL PRO SEQRES 9 H 225 ARG ARG ASP GLU PHE ASP ILE TRP GLY GLN GLY THR MET SEQRES 10 H 225 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 H 225 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 H 225 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 13 H 225 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 14 H 225 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 15 H 225 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 16 H 225 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 17 H 225 HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU SEQRES 18 H 225 PRO LYS SER CYS SEQRES 1 L 213 ASP ILE GLN MET THR GLN SER PRO SER THR LEU SER ALA SEQRES 2 L 213 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 213 GLN SER ILE SER SER TRP LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 213 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR LYS ALA SER SEQRES 5 L 213 THR LEU GLU SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 213 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 213 GLN PRO ASP ASP PHE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 L 213 ASN THR TYR TRP THR PHE GLY GLN GLY THR LYS VAL GLU SEQRES 9 L 213 ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 L 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 L 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 L 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 L 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 L 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 L 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 L 213 ASN ARG GLY GLU CYS HET CL H 301 1 HETNAM CL CHLORIDE ION FORMUL 3 CL CL 1- FORMUL 4 HOH *479(H2 O) HELIX 1 1 ASN H 74 LYS H 76 5 3 HELIX 2 2 ARG H 87 THR H 91 5 5 HELIX 3 3 SER H 136 LYS H 138 5 3 HELIX 4 4 SER H 165 ALA H 167 5 3 HELIX 5 5 SER H 196 LEU H 198 5 3 HELIX 6 6 LYS H 210 ASN H 213 5 4 HELIX 7 7 GLN L 79 PHE L 83 5 5 HELIX 8 8 SER L 120 SER L 126 1 7 HELIX 9 9 LYS L 182 LYS L 187 1 6 SHEET 1 A 4 GLN H 3 SER H 7 0 SHEET 2 A 4 LEU H 18 SER H 25 -1 O ALA H 23 N LEU H 5 SHEET 3 A 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 A 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 B 6 LEU H 11 VAL H 12 0 SHEET 2 B 6 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 B 6 ALA H 92 ARG H 100 -1 N TYR H 94 O THR H 116 SHEET 4 B 6 TYR H 32 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 B 6 GLU H 46 TYR H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 B 6 ILE H 57 TYR H 60 -1 O ILE H 57 N TYR H 52 SHEET 1 C 4 LEU H 11 VAL H 12 0 SHEET 2 C 4 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 C 4 ALA H 92 ARG H 100 -1 N TYR H 94 O THR H 116 SHEET 4 C 4 ASP H 110 TRP H 112 -1 O ILE H 111 N TYR H 98 SHEET 1 D 4 SER H 129 LEU H 133 0 SHEET 2 D 4 THR H 144 TYR H 154 -1 O LEU H 150 N PHE H 131 SHEET 3 D 4 TYR H 185 PRO H 194 -1 O LEU H 187 N VAL H 151 SHEET 4 D 4 VAL H 172 THR H 174 -1 N HIS H 173 O VAL H 190 SHEET 1 E 4 THR H 140 SER H 141 0 SHEET 2 E 4 THR H 144 TYR H 154 -1 O THR H 144 N SER H 141 SHEET 3 E 4 TYR H 185 PRO H 194 -1 O LEU H 187 N VAL H 151 SHEET 4 E 4 VAL H 178 LEU H 179 -1 N VAL H 178 O SER H 186 SHEET 1 F 3 THR H 160 TRP H 163 0 SHEET 2 F 3 ILE H 204 HIS H 209 -1 O ASN H 206 N SER H 162 SHEET 3 F 3 THR H 214 ARG H 219 -1 O VAL H 216 N VAL H 207 SHEET 1 G 4 MET L 4 SER L 7 0 SHEET 2 G 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 G 4 GLU L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 G 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 H 6 THR L 10 ALA L 13 0 SHEET 2 H 6 THR L 101 ILE L 105 1 O GLU L 104 N LEU L 11 SHEET 3 H 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 103 SHEET 4 H 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 H 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 H 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 I 4 THR L 10 ALA L 13 0 SHEET 2 I 4 THR L 101 ILE L 105 1 O GLU L 104 N LEU L 11 SHEET 3 I 4 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 103 SHEET 4 I 4 THR L 96 PHE L 97 -1 O THR L 96 N GLN L 90 SHEET 1 J 4 SER L 113 PHE L 117 0 SHEET 2 J 4 THR L 128 PHE L 138 -1 O LEU L 134 N PHE L 115 SHEET 3 J 4 TYR L 172 SER L 181 -1 O LEU L 180 N ALA L 129 SHEET 4 J 4 SER L 158 VAL L 162 -1 N SER L 161 O SER L 175 SHEET 1 K 4 ALA L 152 LEU L 153 0 SHEET 2 K 4 LYS L 144 VAL L 149 -1 N VAL L 149 O ALA L 152 SHEET 3 K 4 VAL L 190 THR L 196 -1 O GLU L 194 N GLN L 146 SHEET 4 K 4 VAL L 204 ASN L 209 -1 O VAL L 204 N VAL L 195 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.11 SSBOND 2 CYS H 149 CYS H 205 1555 1555 2.05 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.09 SSBOND 4 CYS L 133 CYS L 193 1555 1555 1.95 CISPEP 1 PHE H 155 PRO H 156 0 -6.15 CISPEP 2 GLU H 157 PRO H 158 0 1.83 CISPEP 3 GLU H 157 PRO H 158 0 3.05 CISPEP 4 SER L 7 PRO L 8 0 -8.26 CISPEP 5 TYR L 139 PRO L 140 0 2.95 SITE 1 AC1 2 TRP H 47 PHE L 97 CRYST1 45.930 60.540 150.490 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021772 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016518 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006645 0.00000