HEADER UNKNOWN FUNCTION 13-MAR-14 4PUP TITLE 2.75 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF UNCHARACTERIZED PROTEIN TITLE 2 FROM BURKHOLDERIA CENOCEPACIA J2315 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 216591; SOURCE 4 STRAIN: J2315; SOURCE 5 GENE: BCAM1129; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG87 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, BURKHOLDERIA CENOCEPACIA J2315, APC110287, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.S.HALAVATY,E.V.FILIPPOVA,Z.WAWRZAK,O.KIRYUKHINA,G.MINASOV, AUTHOR 2 R.JEDRZEJCZAK,L.SHUVALOVA,A.JOACHIMIAK,W.F.ANDERSON,MIDWEST CENTER AUTHOR 3 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 2 22-NOV-17 4PUP 1 REMARK REVDAT 1 16-APR-14 4PUP 0 JRNL AUTH A.S.HALAVATY,E.V.FILIPPOVA,Z.WAWRZAK,O.KIRYUKHINA,G.MINASOV, JRNL AUTH 2 R.JEDRZEJCZAK,L.SHUVALOVA,A.JOACHIMIAK,W.F.ANDERSON, JRNL AUTH 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL 2.75 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF JRNL TITL 2 UNCHARACTERIZED PROTEIN FROM BURKHOLDERIA CENOCEPACIA J2315 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 10382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 523 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 752 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.3430 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.5570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2524 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.08000 REMARK 3 B22 (A**2) : -0.40000 REMARK 3 B33 (A**2) : -4.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.81000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 4.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.357 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.298 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 32.202 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2592 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2356 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3538 ; 1.865 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5417 ; 1.211 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 2.318 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;26.011 ;22.743 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 321 ;11.285 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ; 8.606 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 381 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2994 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 597 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 0 120 B 0 120 5393 0.13 0.05 REMARK 3 2 A 0 120 C 0 120 5334 0.14 0.05 REMARK 3 3 B 0 123 C 0 123 5763 0.10 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 11.1581 40.7084 4.5734 REMARK 3 T TENSOR REMARK 3 T11: 0.0330 T22: 0.3037 REMARK 3 T33: 0.1553 T12: -0.0575 REMARK 3 T13: -0.0274 T23: -0.0413 REMARK 3 L TENSOR REMARK 3 L11: 3.5451 L22: 2.3344 REMARK 3 L33: 4.5185 L12: 0.3790 REMARK 3 L13: 0.5211 L23: 0.9178 REMARK 3 S TENSOR REMARK 3 S11: 0.1573 S12: -0.3200 S13: -0.1204 REMARK 3 S21: -0.0578 S22: -0.0692 S23: -0.2927 REMARK 3 S31: -0.2647 S32: 0.9044 S33: -0.0881 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 104 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6170 30.1650 4.9601 REMARK 3 T TENSOR REMARK 3 T11: 0.2242 T22: 0.3991 REMARK 3 T33: 0.6181 T12: 0.1183 REMARK 3 T13: -0.0711 T23: 0.0754 REMARK 3 L TENSOR REMARK 3 L11: 5.6043 L22: 10.2358 REMARK 3 L33: 8.1900 L12: -4.5978 REMARK 3 L13: -6.2952 L23: 7.8131 REMARK 3 S TENSOR REMARK 3 S11: -0.1467 S12: -0.7285 S13: -0.6941 REMARK 3 S21: 0.1511 S22: -0.2371 S23: -0.1280 REMARK 3 S31: 0.2281 S32: 0.5351 S33: 0.3839 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 105 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0376 36.3834 8.7574 REMARK 3 T TENSOR REMARK 3 T11: 0.0640 T22: 0.4865 REMARK 3 T33: 0.2523 T12: 0.0966 REMARK 3 T13: -0.0081 T23: 0.1025 REMARK 3 L TENSOR REMARK 3 L11: 8.4183 L22: 23.0662 REMARK 3 L33: 6.9552 L12: 3.5810 REMARK 3 L13: 2.8032 L23: 11.4433 REMARK 3 S TENSOR REMARK 3 S11: 0.2326 S12: -0.2015 S13: -0.4063 REMARK 3 S21: -0.4779 S22: 0.1620 S23: -1.2681 REMARK 3 S31: -0.0730 S32: 0.7633 S33: -0.3946 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 50 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4172 23.3805 26.9302 REMARK 3 T TENSOR REMARK 3 T11: 0.3855 T22: 0.1970 REMARK 3 T33: 0.1892 T12: -0.1494 REMARK 3 T13: 0.0184 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 4.3329 L22: 7.7165 REMARK 3 L33: 7.2190 L12: -0.5008 REMARK 3 L13: -2.3104 L23: 1.4098 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: -0.0184 S13: -0.2419 REMARK 3 S21: -0.1240 S22: -0.2484 S23: -0.0505 REMARK 3 S31: 0.8318 S32: 0.3360 S33: 0.2390 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 51 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): -15.7893 38.2094 24.3430 REMARK 3 T TENSOR REMARK 3 T11: 0.1678 T22: 0.2872 REMARK 3 T33: 0.4083 T12: -0.1765 REMARK 3 T13: -0.0118 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.0870 L22: 6.0223 REMARK 3 L33: 5.2771 L12: -0.3465 REMARK 3 L13: -0.5930 L23: 0.5029 REMARK 3 S TENSOR REMARK 3 S11: 0.1893 S12: 0.1604 S13: 0.1677 REMARK 3 S21: -0.1977 S22: -0.1483 S23: 0.7353 REMARK 3 S31: 0.0841 S32: -0.4881 S33: -0.0411 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 112 B 123 REMARK 3 ORIGIN FOR THE GROUP (A): -19.6184 18.3137 29.9081 REMARK 3 T TENSOR REMARK 3 T11: 0.6294 T22: 0.3550 REMARK 3 T33: 0.4040 T12: -0.2452 REMARK 3 T13: 0.0361 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 9.2285 L22: 10.0418 REMARK 3 L33: 14.5651 L12: -1.6968 REMARK 3 L13: 11.1271 L23: -4.2197 REMARK 3 S TENSOR REMARK 3 S11: 1.3242 S12: 0.1838 S13: -0.0615 REMARK 3 S21: -0.7296 S22: -0.7995 S23: 0.0787 REMARK 3 S31: 1.9445 S32: 0.2352 S33: -0.5247 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 38 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2233 52.1825 24.5662 REMARK 3 T TENSOR REMARK 3 T11: 0.3749 T22: 0.5389 REMARK 3 T33: 0.5217 T12: -0.2492 REMARK 3 T13: -0.0114 T23: -0.1168 REMARK 3 L TENSOR REMARK 3 L11: 10.5264 L22: 3.7726 REMARK 3 L33: 2.6005 L12: -1.5294 REMARK 3 L13: -0.6435 L23: 1.7690 REMARK 3 S TENSOR REMARK 3 S11: 0.1736 S12: -0.6424 S13: 0.1385 REMARK 3 S21: 0.3095 S22: 0.0479 S23: -0.0159 REMARK 3 S31: -0.0708 S32: 0.7203 S33: -0.2215 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 39 C 106 REMARK 3 ORIGIN FOR THE GROUP (A): -4.9353 48.3378 22.3163 REMARK 3 T TENSOR REMARK 3 T11: 0.2181 T22: 0.1655 REMARK 3 T33: 0.3372 T12: -0.1484 REMARK 3 T13: 0.0419 T23: -0.0649 REMARK 3 L TENSOR REMARK 3 L11: 6.6175 L22: 1.1576 REMARK 3 L33: 3.3534 L12: 0.5833 REMARK 3 L13: 0.9144 L23: -1.6747 REMARK 3 S TENSOR REMARK 3 S11: 0.2678 S12: -0.0684 S13: 0.1621 REMARK 3 S21: 0.2413 S22: 0.0337 S23: 0.1124 REMARK 3 S31: -0.4853 S32: 0.1646 S33: -0.3015 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 107 C 123 REMARK 3 ORIGIN FOR THE GROUP (A): 8.4755 58.2795 22.1237 REMARK 3 T TENSOR REMARK 3 T11: 0.2664 T22: 0.2762 REMARK 3 T33: 0.1643 T12: -0.2195 REMARK 3 T13: 0.0037 T23: -0.0720 REMARK 3 L TENSOR REMARK 3 L11: 26.6197 L22: 7.3859 REMARK 3 L33: 1.7357 L12: -6.7490 REMARK 3 L13: -5.6017 L23: 1.2887 REMARK 3 S TENSOR REMARK 3 S11: 0.0109 S12: -0.5555 S13: 0.2288 REMARK 3 S21: 0.2605 S22: 0.2577 S23: 0.3717 REMARK 3 S31: -0.1969 S32: 0.4360 S33: -0.2686 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4PUP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085241. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BE LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10997 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.60500 REMARK 200 R SYM FOR SHELL (I) : 0.60500 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7 MG/ML IN 10 MM TRIS-HCL PH REMARK 280 8.3, 500 MM NACL, 5 MM BME, CRYSTALLIZATION CONDITIONS: 0.2 M REMARK 280 SODIUM FORMATE, 20 % (W/V) PEG 3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 32.39250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.02550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 32.39250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.02550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 ARG A 80 REMARK 465 ALA A 81 REMARK 465 VAL A 82 REMARK 465 PRO A 83 REMARK 465 ALA A 84 REMARK 465 ALA A 85 REMARK 465 GLY A 86 REMARK 465 GLU A 87 REMARK 465 ARG A 88 REMARK 465 CYS A 89 REMARK 465 ARG A 122 REMARK 465 PRO A 123 REMARK 465 ARG A 124 REMARK 465 MSE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 ARG B 80 REMARK 465 ALA B 81 REMARK 465 VAL B 82 REMARK 465 PRO B 83 REMARK 465 ALA B 84 REMARK 465 ALA B 85 REMARK 465 GLY B 86 REMARK 465 GLU B 87 REMARK 465 ARG B 88 REMARK 465 CYS B 89 REMARK 465 THR B 90 REMARK 465 PHE B 91 REMARK 465 ARG B 124 REMARK 465 MSE C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 ARG C 80 REMARK 465 ALA C 81 REMARK 465 VAL C 82 REMARK 465 PRO C 83 REMARK 465 ALA C 84 REMARK 465 ALA C 85 REMARK 465 GLY C 86 REMARK 465 GLU C 87 REMARK 465 ARG C 88 REMARK 465 ARG C 124 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 1 N - CA - CB ANGL. DEV. = 11.7 DEGREES REMARK 500 ASN A 92 N - CA - C ANGL. DEV. = 17.6 DEGREES REMARK 500 ASP A 119 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 23 59.08 32.66 REMARK 500 PRO A 61 47.69 -74.29 REMARK 500 ASP A 117 67.47 -116.36 REMARK 500 MSE A 120 32.43 -92.81 REMARK 500 VAL B 23 55.55 32.33 REMARK 500 PRO B 61 48.87 -73.65 REMARK 500 ASP B 68 -73.54 -5.32 REMARK 500 PRO B 116 153.18 -49.22 REMARK 500 VAL C 23 55.48 32.79 REMARK 500 PRO C 61 48.06 -74.40 REMARK 500 THR C 90 -32.78 -130.85 REMARK 500 PRO C 116 152.37 -47.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC110287 RELATED DB: TARGETTRACK DBREF 4PUP A 1 124 UNP B4EGA9 B4EGA9_BURCJ 1 124 DBREF 4PUP B 1 124 UNP B4EGA9 B4EGA9_BURCJ 1 124 DBREF 4PUP C 1 124 UNP B4EGA9 B4EGA9_BURCJ 1 124 SEQADV 4PUP MSE A -6 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS A -5 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS A -4 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS A -3 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS A -2 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS A -1 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS A 0 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP MSE B -6 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS B -5 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS B -4 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS B -3 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS B -2 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS B -1 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS B 0 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP MSE C -6 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS C -5 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS C -4 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS C -3 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS C -2 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS C -1 UNP B4EGA9 EXPRESSION TAG SEQADV 4PUP HIS C 0 UNP B4EGA9 EXPRESSION TAG SEQRES 1 A 131 MSE HIS HIS HIS HIS HIS HIS MSE GLN VAL GLN ASP LEU SEQRES 2 A 131 THR GLY ALA ALA LEU ASP TYR TRP VAL ALA THR ALA GLU SEQRES 3 A 131 GLY HIS GLU VAL PRO ARG ALA ASP ALA SER GLY CYS THR SEQRES 4 A 131 SER ILE ARG GLU PRO GLY GLY VAL PRO THR PRO PHE ALA SEQRES 5 A 131 PRO SER SER SER TRP ALA ASP GLY GLY PRO ILE VAL GLU SEQRES 6 A 131 ARG LEU PRO PHE ALA GLY PHE GLU ARG ASP GLY GLY ARG SEQRES 7 A 131 GLY ALA TRP ARG ALA VAL LEU HIS ARG ALA VAL PRO ALA SEQRES 8 A 131 ALA GLY GLU ARG CYS THR PHE ASN GLN SER GLY PRO THR SEQRES 9 A 131 LEU LEU ILE ALA ALA MSE ARG THR LEU VAL ALA SER THR SEQRES 10 A 131 PHE GLY ASP ASP VAL PRO ASP LEU ASP MSE ALA ARG PRO SEQRES 11 A 131 ARG SEQRES 1 B 131 MSE HIS HIS HIS HIS HIS HIS MSE GLN VAL GLN ASP LEU SEQRES 2 B 131 THR GLY ALA ALA LEU ASP TYR TRP VAL ALA THR ALA GLU SEQRES 3 B 131 GLY HIS GLU VAL PRO ARG ALA ASP ALA SER GLY CYS THR SEQRES 4 B 131 SER ILE ARG GLU PRO GLY GLY VAL PRO THR PRO PHE ALA SEQRES 5 B 131 PRO SER SER SER TRP ALA ASP GLY GLY PRO ILE VAL GLU SEQRES 6 B 131 ARG LEU PRO PHE ALA GLY PHE GLU ARG ASP GLY GLY ARG SEQRES 7 B 131 GLY ALA TRP ARG ALA VAL LEU HIS ARG ALA VAL PRO ALA SEQRES 8 B 131 ALA GLY GLU ARG CYS THR PHE ASN GLN SER GLY PRO THR SEQRES 9 B 131 LEU LEU ILE ALA ALA MSE ARG THR LEU VAL ALA SER THR SEQRES 10 B 131 PHE GLY ASP ASP VAL PRO ASP LEU ASP MSE ALA ARG PRO SEQRES 11 B 131 ARG SEQRES 1 C 131 MSE HIS HIS HIS HIS HIS HIS MSE GLN VAL GLN ASP LEU SEQRES 2 C 131 THR GLY ALA ALA LEU ASP TYR TRP VAL ALA THR ALA GLU SEQRES 3 C 131 GLY HIS GLU VAL PRO ARG ALA ASP ALA SER GLY CYS THR SEQRES 4 C 131 SER ILE ARG GLU PRO GLY GLY VAL PRO THR PRO PHE ALA SEQRES 5 C 131 PRO SER SER SER TRP ALA ASP GLY GLY PRO ILE VAL GLU SEQRES 6 C 131 ARG LEU PRO PHE ALA GLY PHE GLU ARG ASP GLY GLY ARG SEQRES 7 C 131 GLY ALA TRP ARG ALA VAL LEU HIS ARG ALA VAL PRO ALA SEQRES 8 C 131 ALA GLY GLU ARG CYS THR PHE ASN GLN SER GLY PRO THR SEQRES 9 C 131 LEU LEU ILE ALA ALA MSE ARG THR LEU VAL ALA SER THR SEQRES 10 C 131 PHE GLY ASP ASP VAL PRO ASP LEU ASP MSE ALA ARG PRO SEQRES 11 C 131 ARG MODRES 4PUP MSE A 1 MET SELENOMETHIONINE MODRES 4PUP MSE A 103 MET SELENOMETHIONINE MODRES 4PUP MSE A 120 MET SELENOMETHIONINE MODRES 4PUP MSE B 1 MET SELENOMETHIONINE MODRES 4PUP MSE B 103 MET SELENOMETHIONINE MODRES 4PUP MSE B 120 MET SELENOMETHIONINE MODRES 4PUP MSE C 1 MET SELENOMETHIONINE MODRES 4PUP MSE C 103 MET SELENOMETHIONINE MODRES 4PUP MSE C 120 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 103 8 HET MSE A 120 8 HET MSE B 1 8 HET MSE B 103 8 HET MSE B 120 8 HET MSE C 1 8 HET MSE C 103 8 HET MSE C 120 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 4 HOH *56(H2 O) HELIX 1 1 GLN A 4 LEU A 6 5 3 HELIX 2 2 THR A 7 GLU A 19 1 13 HELIX 3 3 SER A 49 LEU A 60 1 12 HELIX 4 4 ARG A 67 ARG A 71 5 5 HELIX 5 5 THR A 97 GLY A 112 1 16 HELIX 6 6 GLN B 4 LEU B 6 5 3 HELIX 7 7 THR B 7 GLU B 19 1 13 HELIX 8 8 SER B 49 LEU B 60 1 12 HELIX 9 9 THR B 97 GLY B 112 1 16 HELIX 10 10 GLN C 4 LEU C 6 5 3 HELIX 11 11 THR C 7 GLU C 19 1 13 HELIX 12 12 SER C 49 LEU C 60 1 12 HELIX 13 13 ASP C 68 ARG C 71 5 4 HELIX 14 14 THR C 97 GLY C 112 1 16 SHEET 1 A 2 MSE A 1 GLN A 2 0 SHEET 2 A 2 ASP A 114 VAL A 115 -1 O VAL A 115 N MSE A 1 SHEET 1 B 3 GLU A 22 ALA A 26 0 SHEET 2 B 3 CYS A 31 ILE A 34 -1 O ILE A 34 N GLU A 22 SHEET 3 B 3 THR A 42 PRO A 43 -1 O THR A 42 N SER A 33 SHEET 1 C 3 GLY A 64 GLU A 66 0 SHEET 2 C 3 TRP A 74 VAL A 77 -1 O VAL A 77 N GLY A 64 SHEET 3 C 3 ASN A 92 GLY A 95 -1 O GLY A 95 N TRP A 74 SHEET 1 D 2 HIS B 0 GLN B 2 0 SHEET 2 D 2 ASP B 114 PRO B 116 -1 O VAL B 115 N MSE B 1 SHEET 1 E 3 GLU B 22 ALA B 26 0 SHEET 2 E 3 CYS B 31 ILE B 34 -1 O THR B 32 N ARG B 25 SHEET 3 E 3 THR B 42 PRO B 43 -1 O THR B 42 N SER B 33 SHEET 1 F 6 GLN B 93 GLY B 95 0 SHEET 2 F 6 TRP B 74 LEU B 78 -1 N TRP B 74 O GLY B 95 SHEET 3 F 6 PHE B 62 GLU B 66 -1 N GLY B 64 O VAL B 77 SHEET 4 F 6 PHE C 62 GLU C 66 -1 O PHE C 65 N PHE B 65 SHEET 5 F 6 TRP C 74 LEU C 78 -1 O VAL C 77 N GLY C 64 SHEET 6 F 6 SER C 94 GLY C 95 -1 O GLY C 95 N TRP C 74 SHEET 1 G 2 MSE C 1 GLN C 2 0 SHEET 2 G 2 ASP C 114 VAL C 115 -1 O VAL C 115 N MSE C 1 SHEET 1 H 3 GLU C 22 ALA C 26 0 SHEET 2 H 3 CYS C 31 ILE C 34 -1 O ILE C 34 N GLU C 22 SHEET 3 H 3 THR C 42 PRO C 43 -1 O THR C 42 N SER C 33 LINK C HIS A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N GLN A 2 1555 1555 1.32 LINK C ALA A 102 N MSE A 103 1555 1555 1.32 LINK C MSE A 103 N ARG A 104 1555 1555 1.33 LINK C ASP A 119 N MSE A 120 1555 1555 1.31 LINK C MSE A 120 N ALA A 121 1555 1555 1.33 LINK C HIS B 0 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N GLN B 2 1555 1555 1.32 LINK C ALA B 102 N MSE B 103 1555 1555 1.33 LINK C MSE B 103 N ARG B 104 1555 1555 1.32 LINK C ASP B 119 N MSE B 120 1555 1555 1.34 LINK C MSE B 120 N ALA B 121 1555 1555 1.33 LINK C HIS C 0 N MSE C 1 1555 1555 1.34 LINK C MSE C 1 N GLN C 2 1555 1555 1.33 LINK C ALA C 102 N MSE C 103 1555 1555 1.33 LINK C MSE C 103 N ARG C 104 1555 1555 1.31 LINK C ASP C 119 N MSE C 120 1555 1555 1.33 LINK C MSE C 120 N ALA C 121 1555 1555 1.33 CRYST1 64.785 88.051 79.375 90.00 108.34 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015436 0.000000 0.005117 0.00000 SCALE2 0.000000 0.011357 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013273 0.00000