data_4PUX # _entry.id 4PUX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PUX pdb_00004pux 10.2210/pdb4pux/pdb RCSB RCSB085249 ? ? WWPDB D_1000085249 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-420366 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4PUX _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-03-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (ABAYE2633) from Acinetobacter baumannii AYE at 1.43 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4PUX _cell.length_a 61.338 _cell.length_b 99.178 _cell.length_c 48.677 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4PUX _symmetry.Int_Tables_number 21 _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 17847.922 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 3 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 5 ? ? ? ? 5 water nat water 18.015 212 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GETQYNPPPIQLEPLAKFSVDLNAPVWELGTTSDAGKRRIIPITGGTFEGKSLKGRILNNGADWQIVDSKGLAIIDTRYL LETDDGALIYLQTKGYRHGSAETLKQLAQGKDVDPKNYYFKIT(MSE)QFETSSPKYSWLNQTVAVGSA(MSE)RLGKAV IYDAYTLK ; _entity_poly.pdbx_seq_one_letter_code_can ;GETQYNPPPIQLEPLAKFSVDLNAPVWELGTTSDAGKRRIIPITGGTFEGKSLKGRILNNGADWQIVDSKGLAIIDTRYL LETDDGALIYLQTKGYRHGSAETLKQLAQGKDVDPKNYYFKITMQFETSSPKYSWLNQTVAVGSAMRLGKAVIYDAYTLK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-420366 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 THR n 1 4 GLN n 1 5 TYR n 1 6 ASN n 1 7 PRO n 1 8 PRO n 1 9 PRO n 1 10 ILE n 1 11 GLN n 1 12 LEU n 1 13 GLU n 1 14 PRO n 1 15 LEU n 1 16 ALA n 1 17 LYS n 1 18 PHE n 1 19 SER n 1 20 VAL n 1 21 ASP n 1 22 LEU n 1 23 ASN n 1 24 ALA n 1 25 PRO n 1 26 VAL n 1 27 TRP n 1 28 GLU n 1 29 LEU n 1 30 GLY n 1 31 THR n 1 32 THR n 1 33 SER n 1 34 ASP n 1 35 ALA n 1 36 GLY n 1 37 LYS n 1 38 ARG n 1 39 ARG n 1 40 ILE n 1 41 ILE n 1 42 PRO n 1 43 ILE n 1 44 THR n 1 45 GLY n 1 46 GLY n 1 47 THR n 1 48 PHE n 1 49 GLU n 1 50 GLY n 1 51 LYS n 1 52 SER n 1 53 LEU n 1 54 LYS n 1 55 GLY n 1 56 ARG n 1 57 ILE n 1 58 LEU n 1 59 ASN n 1 60 ASN n 1 61 GLY n 1 62 ALA n 1 63 ASP n 1 64 TRP n 1 65 GLN n 1 66 ILE n 1 67 VAL n 1 68 ASP n 1 69 SER n 1 70 LYS n 1 71 GLY n 1 72 LEU n 1 73 ALA n 1 74 ILE n 1 75 ILE n 1 76 ASP n 1 77 THR n 1 78 ARG n 1 79 TYR n 1 80 LEU n 1 81 LEU n 1 82 GLU n 1 83 THR n 1 84 ASP n 1 85 ASP n 1 86 GLY n 1 87 ALA n 1 88 LEU n 1 89 ILE n 1 90 TYR n 1 91 LEU n 1 92 GLN n 1 93 THR n 1 94 LYS n 1 95 GLY n 1 96 TYR n 1 97 ARG n 1 98 HIS n 1 99 GLY n 1 100 SER n 1 101 ALA n 1 102 GLU n 1 103 THR n 1 104 LEU n 1 105 LYS n 1 106 GLN n 1 107 LEU n 1 108 ALA n 1 109 GLN n 1 110 GLY n 1 111 LYS n 1 112 ASP n 1 113 VAL n 1 114 ASP n 1 115 PRO n 1 116 LYS n 1 117 ASN n 1 118 TYR n 1 119 TYR n 1 120 PHE n 1 121 LYS n 1 122 ILE n 1 123 THR n 1 124 MSE n 1 125 GLN n 1 126 PHE n 1 127 GLU n 1 128 THR n 1 129 SER n 1 130 SER n 1 131 PRO n 1 132 LYS n 1 133 TYR n 1 134 SER n 1 135 TRP n 1 136 LEU n 1 137 ASN n 1 138 GLN n 1 139 THR n 1 140 VAL n 1 141 ALA n 1 142 VAL n 1 143 GLY n 1 144 SER n 1 145 ALA n 1 146 MSE n 1 147 ARG n 1 148 LEU n 1 149 GLY n 1 150 LYS n 1 151 ALA n 1 152 VAL n 1 153 ILE n 1 154 TYR n 1 155 ASP n 1 156 ALA n 1 157 TYR n 1 158 THR n 1 159 LEU n 1 160 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ABAYE2633 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain AYE _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Acinetobacter baumannii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 509173 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B0VAD0_ACIBY _struct_ref.pdbx_db_accession B0VAD0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ETQYNPPPIQLEPLAKFSVDLNAPVWELGTTSDAGKRRIIPITGGTFEGKSLKGRILNNGADWQIVDSKGLAIIDTRYLL ETDDGALIYLQTKGYRHGSAETLKQLAQGKDVDPKNYYFKITMQFETSSPKYSWLNQTVAVGSAMRLGKAVIYDAYTLK ; _struct_ref.pdbx_align_begin 20 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4PUX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 160 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B0VAD0 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 178 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 178 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4PUX _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code B0VAD0 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4PUX # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;1.0M lithium chloride, 20.0% polyethylene glycol 6000, 0.1M citric acid pH 4.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2013-11-26 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.9798 1.0 3 0.97913 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.9798,0.97913 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4PUX _reflns.d_resolution_high 1.43 _reflns.d_resolution_low 24.978 _reflns.number_obs 27406 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_netI_over_sigmaI 12.430 _reflns.percent_possible_obs 95.100 _reflns.B_iso_Wilson_estimate 14.239 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.430 1.480 8441 ? 4915 0.342 2.2 ? ? ? ? ? 95.400 1 1 1.480 1.540 9018 ? 5175 0.246 3.0 ? ? ? ? ? 96.100 2 1 1.540 1.610 8635 ? 5057 0.186 4.1 ? ? ? ? ? 95.300 3 1 1.610 1.700 9147 ? 5322 0.139 5.3 ? ? ? ? ? 94.600 4 1 1.700 1.800 8459 ? 4802 0.096 7.5 ? ? ? ? ? 96.400 5 1 1.800 1.940 8563 ? 5019 0.065 10.5 ? ? ? ? ? 93.800 6 1 1.940 2.140 9051 ? 5154 0.044 15.3 ? ? ? ? ? 95.500 7 1 2.140 2.440 8631 ? 4882 0.033 19.9 ? ? ? ? ? 94.400 8 1 2.440 3.080 9170 ? 5127 0.027 24.4 ? ? ? ? ? 95.600 9 1 3.080 ? 8865 ? 4982 0.019 32.5 ? ? ? ? ? 93.600 10 1 # _refine.entry_id 4PUX _refine.ls_d_res_high 1.4300 _refine.ls_d_res_low 24.978 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.3300 _refine.ls_number_reflns_obs 27406 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REFINEMENT. 4. 1,2-ETHANE-DIOL(EDO), CHLORIDE(CL) AND CITRATE(CIT) MODELED WERE PRESENT IN CRYSTALLIZATION OR CRYO CONDITIONS. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1199 _refine.ls_R_factor_R_work 0.1181 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1528 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1378 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 19.2014 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.1600 _refine.aniso_B[2][2] -0.1400 _refine.aniso_B[3][3] -0.0200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9820 _refine.correlation_coeff_Fo_to_Fc_free 0.9730 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0630 _refine.pdbx_overall_ESU_R_Free 0.0550 _refine.overall_SU_ML 0.0360 _refine.overall_SU_B 2.0880 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 126.980 _refine.B_iso_min 7.530 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1233 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 212 _refine_hist.number_atoms_total 1479 _refine_hist.d_res_high 1.4300 _refine_hist.d_res_low 24.978 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1377 0.018 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1360 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1878 1.581 1.995 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3158 0.827 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 184 6.722 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 56 32.190 24.464 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 252 11.947 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7 22.331 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 207 0.115 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1555 0.011 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 295 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 662 2.748 1.359 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 661 2.718 1.356 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 833 3.260 2.049 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2737 3.163 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 161 30.272 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 2766 9.694 5.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.4300 _refine_ls_shell.d_res_low 1.4670 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.4700 _refine_ls_shell.number_reflns_R_work 1903 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2040 _refine_ls_shell.R_factor_R_free 0.2590 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 87 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1990 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.title 'Crystal structure of a beta-barrel like protein (ABAYE2633) from Acinetobacter baumannii AYE at 1.43 A resolution' _struct.entry_id 4PUX _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.text ;beta-barrel fold, PF11578 family, DUF3237, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4PUX # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 5 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 100 ? GLN A 109 ? SER A 118 GLN A 127 1 ? 10 HELX_P HELX_P2 2 TYR A 133 ? THR A 139 ? TYR A 151 THR A 157 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A THR 123 C ? ? ? 1_555 A MSE 124 N ? ? A THR 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? A MSE 124 C ? ? ? 1_555 A GLN 125 N ? ? A MSE 142 A GLN 143 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale3 covale both ? A ALA 145 C ? ? ? 1_555 A MSE 146 N ? ? A ALA 163 A MSE 164 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale4 covale both ? A MSE 146 C ? ? ? 1_555 A ARG 147 N ? ? A MSE 164 A ARG 165 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 114 A . ? ASP 132 A PRO 115 A ? PRO 133 A 1 -2.99 2 ASP 114 A . ? ASP 132 A PRO 115 A ? PRO 133 A 1 -3.14 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 27 ? SER A 33 ? TRP A 45 SER A 51 A 2 GLY A 36 ? PRO A 42 ? GLY A 54 PRO A 60 A 3 ALA A 62 ? VAL A 67 ? ALA A 80 VAL A 85 A 4 ALA A 73 ? THR A 83 ? ALA A 91 THR A 101 A 5 LEU A 88 ? GLY A 99 ? LEU A 106 GLY A 117 A 6 TYR A 118 ? GLU A 127 ? TYR A 136 GLU A 145 A 7 ALA A 141 ? ARG A 147 ? ALA A 159 ARG A 165 A 8 ALA A 151 ? LYS A 160 ? ALA A 169 LYS A 178 A 9 GLN A 11 ? ASP A 21 ? GLN A 29 ASP A 39 A 10 GLY A 45 ? GLU A 49 ? GLY A 63 GLU A 67 A 11 LYS A 54 ? ILE A 57 ? LYS A 72 ILE A 75 A 12 ALA A 73 ? THR A 83 ? ALA A 91 THR A 101 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 27 ? N TRP A 45 O ILE A 40 ? O ILE A 58 A 2 3 N LYS A 37 ? N LYS A 55 O VAL A 67 ? O VAL A 85 A 3 4 N TRP A 64 ? N TRP A 82 O ASP A 76 ? O ASP A 94 A 4 5 N ALA A 73 ? N ALA A 91 O ARG A 97 ? O ARG A 115 A 5 6 N LYS A 94 ? N LYS A 112 O THR A 123 ? O THR A 141 A 6 7 N PHE A 120 ? N PHE A 138 O ALA A 145 ? O ALA A 163 A 7 8 N VAL A 142 ? N VAL A 160 O TYR A 157 ? O TYR A 175 A 8 9 O VAL A 152 ? O VAL A 170 N VAL A 20 ? N VAL A 38 A 9 10 N SER A 19 ? N SER A 37 O THR A 47 ? O THR A 65 A 10 11 N PHE A 48 ? N PHE A 66 O GLY A 55 ? O GLY A 73 A 11 12 N ARG A 56 ? N ARG A 74 O GLU A 82 ? O GLU A 100 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 201 ? 6 'BINDING SITE FOR RESIDUE EDO A 201' AC2 Software A EDO 202 ? 6 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software A EDO 203 ? 4 'BINDING SITE FOR RESIDUE EDO A 203' AC4 Software A EDO 204 ? 3 'BINDING SITE FOR RESIDUE EDO A 204' AC5 Software A CIT 205 ? 9 'BINDING SITE FOR RESIDUE CIT A 205' AC6 Software A CL 206 ? 4 'BINDING SITE FOR RESIDUE CL A 206' AC7 Software A CL 207 ? 3 'BINDING SITE FOR RESIDUE CL A 207' AC8 Software A CL 208 ? 3 'BINDING SITE FOR RESIDUE CL A 208' AC9 Software A CL 209 ? 2 'BINDING SITE FOR RESIDUE CL A 209' BC1 Software A CL 210 ? 2 'BINDING SITE FOR RESIDUE CL A 210' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 56 ? ARG A 74 . ? 1_555 ? 2 AC1 6 ARG A 56 ? ARG A 74 . ? 6_555 ? 3 AC1 6 GLU A 82 ? GLU A 100 . ? 6_555 ? 4 AC1 6 GLU A 82 ? GLU A 100 . ? 1_555 ? 5 AC1 6 ASP A 84 ? ASP A 102 . ? 1_555 ? 6 AC1 6 ASP A 84 ? ASP A 102 . ? 6_555 ? 7 AC2 6 ARG A 38 ? ARG A 56 . ? 1_555 ? 8 AC2 6 ASP A 76 ? ASP A 94 . ? 1_555 ? 9 AC2 6 TYR A 90 ? TYR A 108 . ? 3_555 ? 10 AC2 6 GLN A 92 ? GLN A 110 . ? 3_555 ? 11 AC2 6 HOH L . ? HOH A 339 . ? 1_555 ? 12 AC2 6 HOH L . ? HOH A 352 . ? 3_555 ? 13 AC3 4 ILE A 75 ? ILE A 93 . ? 1_555 ? 14 AC3 4 TYR A 79 ? TYR A 97 . ? 1_555 ? 15 AC3 4 THR A 93 ? THR A 111 . ? 1_555 ? 16 AC3 4 HOH L . ? HOH A 386 . ? 1_555 ? 17 AC4 3 ASP A 85 ? ASP A 103 . ? 1_555 ? 18 AC4 3 SER A 130 ? SER A 148 . ? 1_555 ? 19 AC4 3 HOH L . ? HOH A 417 . ? 1_555 ? 20 AC5 9 TRP A 27 ? TRP A 45 . ? 1_555 ? 21 AC5 9 GLU A 49 ? GLU A 67 . ? 8_455 ? 22 AC5 9 LYS A 54 ? LYS A 72 . ? 8_455 ? 23 AC5 9 ARG A 56 ? ARG A 74 . ? 3_555 ? 24 AC5 9 HOH L . ? HOH A 320 . ? 3_555 ? 25 AC5 9 HOH L . ? HOH A 335 . ? 3_555 ? 26 AC5 9 HOH L . ? HOH A 375 . ? 1_555 ? 27 AC5 9 HOH L . ? HOH A 482 . ? 1_555 ? 28 AC5 9 HOH L . ? HOH A 494 . ? 3_555 ? 29 AC6 4 SER A 100 ? SER A 118 . ? 1_555 ? 30 AC6 4 ALA A 101 ? ALA A 119 . ? 1_555 ? 31 AC6 4 HOH L . ? HOH A 404 . ? 4_556 ? 32 AC6 4 HOH L . ? HOH A 506 . ? 4_556 ? 33 AC7 3 GLY A 149 ? GLY A 167 . ? 1_555 ? 34 AC7 3 LYS A 150 ? LYS A 168 . ? 1_555 ? 35 AC7 3 HOH L . ? HOH A 488 . ? 6_555 ? 36 AC8 3 GLN A 65 ? GLN A 83 . ? 1_555 ? 37 AC8 3 ARG A 147 ? ARG A 165 . ? 1_555 ? 38 AC8 3 HOH L . ? HOH A 505 . ? 1_555 ? 39 AC9 2 ARG A 97 ? ARG A 115 . ? 1_555 ? 40 AC9 2 ARG A 147 ? ARG A 165 . ? 1_555 ? 41 BC1 2 GLY A 61 ? GLY A 79 . ? 3_555 ? 42 BC1 2 GLY A 61 ? GLY A 79 . ? 1_555 ? # _atom_sites.entry_id 4PUX _atom_sites.fract_transf_matrix[1][1] 0.016303 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010083 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020544 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 GLU 2 20 ? ? ? A . n A 1 3 THR 3 21 ? ? ? A . n A 1 4 GLN 4 22 22 GLN GLN A . n A 1 5 TYR 5 23 23 TYR TYR A . n A 1 6 ASN 6 24 24 ASN ASN A . n A 1 7 PRO 7 25 25 PRO PRO A . n A 1 8 PRO 8 26 26 PRO PRO A . n A 1 9 PRO 9 27 27 PRO PRO A . n A 1 10 ILE 10 28 28 ILE ILE A . n A 1 11 GLN 11 29 29 GLN GLN A . n A 1 12 LEU 12 30 30 LEU LEU A . n A 1 13 GLU 13 31 31 GLU GLU A . n A 1 14 PRO 14 32 32 PRO PRO A . n A 1 15 LEU 15 33 33 LEU LEU A . n A 1 16 ALA 16 34 34 ALA ALA A . n A 1 17 LYS 17 35 35 LYS LYS A . n A 1 18 PHE 18 36 36 PHE PHE A . n A 1 19 SER 19 37 37 SER SER A . n A 1 20 VAL 20 38 38 VAL VAL A . n A 1 21 ASP 21 39 39 ASP ASP A . n A 1 22 LEU 22 40 40 LEU LEU A . n A 1 23 ASN 23 41 41 ASN ASN A . n A 1 24 ALA 24 42 42 ALA ALA A . n A 1 25 PRO 25 43 43 PRO PRO A . n A 1 26 VAL 26 44 44 VAL VAL A . n A 1 27 TRP 27 45 45 TRP TRP A . n A 1 28 GLU 28 46 46 GLU GLU A . n A 1 29 LEU 29 47 47 LEU LEU A . n A 1 30 GLY 30 48 48 GLY GLY A . n A 1 31 THR 31 49 49 THR THR A . n A 1 32 THR 32 50 50 THR THR A . n A 1 33 SER 33 51 51 SER SER A . n A 1 34 ASP 34 52 52 ASP ASP A . n A 1 35 ALA 35 53 53 ALA ALA A . n A 1 36 GLY 36 54 54 GLY GLY A . n A 1 37 LYS 37 55 55 LYS LYS A . n A 1 38 ARG 38 56 56 ARG ARG A . n A 1 39 ARG 39 57 57 ARG ARG A . n A 1 40 ILE 40 58 58 ILE ILE A . n A 1 41 ILE 41 59 59 ILE ILE A . n A 1 42 PRO 42 60 60 PRO PRO A . n A 1 43 ILE 43 61 61 ILE ILE A . n A 1 44 THR 44 62 62 THR THR A . n A 1 45 GLY 45 63 63 GLY GLY A . n A 1 46 GLY 46 64 64 GLY GLY A . n A 1 47 THR 47 65 65 THR THR A . n A 1 48 PHE 48 66 66 PHE PHE A . n A 1 49 GLU 49 67 67 GLU GLU A . n A 1 50 GLY 50 68 68 GLY GLY A . n A 1 51 LYS 51 69 69 LYS LYS A . n A 1 52 SER 52 70 70 SER SER A . n A 1 53 LEU 53 71 71 LEU LEU A . n A 1 54 LYS 54 72 72 LYS LYS A . n A 1 55 GLY 55 73 73 GLY GLY A . n A 1 56 ARG 56 74 74 ARG ARG A . n A 1 57 ILE 57 75 75 ILE ILE A . n A 1 58 LEU 58 76 76 LEU LEU A . n A 1 59 ASN 59 77 77 ASN ASN A . n A 1 60 ASN 60 78 78 ASN ASN A . n A 1 61 GLY 61 79 79 GLY GLY A . n A 1 62 ALA 62 80 80 ALA ALA A . n A 1 63 ASP 63 81 81 ASP ASP A . n A 1 64 TRP 64 82 82 TRP TRP A . n A 1 65 GLN 65 83 83 GLN GLN A . n A 1 66 ILE 66 84 84 ILE ILE A . n A 1 67 VAL 67 85 85 VAL VAL A . n A 1 68 ASP 68 86 86 ASP ASP A . n A 1 69 SER 69 87 87 SER SER A . n A 1 70 LYS 70 88 88 LYS LYS A . n A 1 71 GLY 71 89 89 GLY GLY A . n A 1 72 LEU 72 90 90 LEU LEU A . n A 1 73 ALA 73 91 91 ALA ALA A . n A 1 74 ILE 74 92 92 ILE ILE A . n A 1 75 ILE 75 93 93 ILE ILE A . n A 1 76 ASP 76 94 94 ASP ASP A . n A 1 77 THR 77 95 95 THR THR A . n A 1 78 ARG 78 96 96 ARG ARG A . n A 1 79 TYR 79 97 97 TYR TYR A . n A 1 80 LEU 80 98 98 LEU LEU A . n A 1 81 LEU 81 99 99 LEU LEU A . n A 1 82 GLU 82 100 100 GLU GLU A . n A 1 83 THR 83 101 101 THR THR A . n A 1 84 ASP 84 102 102 ASP ASP A . n A 1 85 ASP 85 103 103 ASP ASP A . n A 1 86 GLY 86 104 104 GLY GLY A . n A 1 87 ALA 87 105 105 ALA ALA A . n A 1 88 LEU 88 106 106 LEU LEU A . n A 1 89 ILE 89 107 107 ILE ILE A . n A 1 90 TYR 90 108 108 TYR TYR A . n A 1 91 LEU 91 109 109 LEU LEU A . n A 1 92 GLN 92 110 110 GLN GLN A . n A 1 93 THR 93 111 111 THR THR A . n A 1 94 LYS 94 112 112 LYS LYS A . n A 1 95 GLY 95 113 113 GLY GLY A . n A 1 96 TYR 96 114 114 TYR TYR A . n A 1 97 ARG 97 115 115 ARG ARG A . n A 1 98 HIS 98 116 116 HIS HIS A . n A 1 99 GLY 99 117 117 GLY GLY A . n A 1 100 SER 100 118 118 SER SER A . n A 1 101 ALA 101 119 119 ALA ALA A . n A 1 102 GLU 102 120 120 GLU GLU A . n A 1 103 THR 103 121 121 THR THR A . n A 1 104 LEU 104 122 122 LEU LEU A . n A 1 105 LYS 105 123 123 LYS LYS A . n A 1 106 GLN 106 124 124 GLN GLN A . n A 1 107 LEU 107 125 125 LEU LEU A . n A 1 108 ALA 108 126 126 ALA ALA A . n A 1 109 GLN 109 127 127 GLN GLN A . n A 1 110 GLY 110 128 128 GLY GLY A . n A 1 111 LYS 111 129 129 LYS LYS A . n A 1 112 ASP 112 130 130 ASP ASP A . n A 1 113 VAL 113 131 131 VAL VAL A . n A 1 114 ASP 114 132 132 ASP ASP A . n A 1 115 PRO 115 133 133 PRO PRO A . n A 1 116 LYS 116 134 134 LYS LYS A . n A 1 117 ASN 117 135 135 ASN ASN A . n A 1 118 TYR 118 136 136 TYR TYR A . n A 1 119 TYR 119 137 137 TYR TYR A . n A 1 120 PHE 120 138 138 PHE PHE A . n A 1 121 LYS 121 139 139 LYS LYS A . n A 1 122 ILE 122 140 140 ILE ILE A . n A 1 123 THR 123 141 141 THR THR A . n A 1 124 MSE 124 142 142 MSE MSE A . n A 1 125 GLN 125 143 143 GLN GLN A . n A 1 126 PHE 126 144 144 PHE PHE A . n A 1 127 GLU 127 145 145 GLU GLU A . n A 1 128 THR 128 146 146 THR THR A . n A 1 129 SER 129 147 147 SER SER A . n A 1 130 SER 130 148 148 SER SER A . n A 1 131 PRO 131 149 149 PRO PRO A . n A 1 132 LYS 132 150 150 LYS LYS A . n A 1 133 TYR 133 151 151 TYR TYR A . n A 1 134 SER 134 152 152 SER SER A . n A 1 135 TRP 135 153 153 TRP TRP A . n A 1 136 LEU 136 154 154 LEU LEU A . n A 1 137 ASN 137 155 155 ASN ASN A . n A 1 138 GLN 138 156 156 GLN GLN A . n A 1 139 THR 139 157 157 THR THR A . n A 1 140 VAL 140 158 158 VAL VAL A . n A 1 141 ALA 141 159 159 ALA ALA A . n A 1 142 VAL 142 160 160 VAL VAL A . n A 1 143 GLY 143 161 161 GLY GLY A . n A 1 144 SER 144 162 162 SER SER A . n A 1 145 ALA 145 163 163 ALA ALA A . n A 1 146 MSE 146 164 164 MSE MSE A . n A 1 147 ARG 147 165 165 ARG ARG A . n A 1 148 LEU 148 166 166 LEU LEU A . n A 1 149 GLY 149 167 167 GLY GLY A . n A 1 150 LYS 150 168 168 LYS LYS A . n A 1 151 ALA 151 169 169 ALA ALA A . n A 1 152 VAL 152 170 170 VAL VAL A . n A 1 153 ILE 153 171 171 ILE ILE A . n A 1 154 TYR 154 172 172 TYR TYR A . n A 1 155 ASP 155 173 173 ASP ASP A . n A 1 156 ALA 156 174 174 ALA ALA A . n A 1 157 TYR 157 175 175 TYR TYR A . n A 1 158 THR 158 176 176 THR THR A . n A 1 159 LEU 159 177 177 LEU LEU A . n A 1 160 LYS 160 178 178 LYS LYS A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 201 201 EDO EDO A . C 2 EDO 1 202 202 EDO EDO A . D 2 EDO 1 203 203 EDO EDO A . E 2 EDO 1 204 204 EDO EDO A . F 3 CIT 1 205 205 CIT CIT A . G 4 CL 1 206 206 CL CL A . H 4 CL 1 207 207 CL CL A . I 4 CL 1 208 208 CL CL A . J 4 CL 1 209 209 CL CL A . K 4 CL 1 210 210 CL CL A . L 5 HOH 1 301 211 HOH HOH A . L 5 HOH 2 302 212 HOH HOH A . L 5 HOH 3 303 213 HOH HOH A . L 5 HOH 4 304 214 HOH HOH A . L 5 HOH 5 305 215 HOH HOH A . L 5 HOH 6 306 216 HOH HOH A . L 5 HOH 7 307 217 HOH HOH A . L 5 HOH 8 308 218 HOH HOH A . L 5 HOH 9 309 219 HOH HOH A . L 5 HOH 10 310 220 HOH HOH A . L 5 HOH 11 311 221 HOH HOH A . L 5 HOH 12 312 222 HOH HOH A . L 5 HOH 13 313 223 HOH HOH A . L 5 HOH 14 314 224 HOH HOH A . L 5 HOH 15 315 225 HOH HOH A . L 5 HOH 16 316 226 HOH HOH A . L 5 HOH 17 317 227 HOH HOH A . L 5 HOH 18 318 228 HOH HOH A . L 5 HOH 19 319 229 HOH HOH A . L 5 HOH 20 320 230 HOH HOH A . L 5 HOH 21 321 231 HOH HOH A . L 5 HOH 22 322 232 HOH HOH A . L 5 HOH 23 323 233 HOH HOH A . L 5 HOH 24 324 234 HOH HOH A . L 5 HOH 25 325 235 HOH HOH A . L 5 HOH 26 326 236 HOH HOH A . L 5 HOH 27 327 237 HOH HOH A . L 5 HOH 28 328 238 HOH HOH A . L 5 HOH 29 329 239 HOH HOH A . L 5 HOH 30 330 240 HOH HOH A . L 5 HOH 31 331 241 HOH HOH A . L 5 HOH 32 332 242 HOH HOH A . L 5 HOH 33 333 243 HOH HOH A . L 5 HOH 34 334 244 HOH HOH A . L 5 HOH 35 335 245 HOH HOH A . L 5 HOH 36 336 246 HOH HOH A . L 5 HOH 37 337 247 HOH HOH A . L 5 HOH 38 338 248 HOH HOH A . L 5 HOH 39 339 249 HOH HOH A . L 5 HOH 40 340 250 HOH HOH A . L 5 HOH 41 341 251 HOH HOH A . L 5 HOH 42 342 252 HOH HOH A . L 5 HOH 43 343 253 HOH HOH A . L 5 HOH 44 344 254 HOH HOH A . L 5 HOH 45 345 255 HOH HOH A . L 5 HOH 46 346 256 HOH HOH A . L 5 HOH 47 347 257 HOH HOH A . L 5 HOH 48 348 258 HOH HOH A . L 5 HOH 49 349 259 HOH HOH A . L 5 HOH 50 350 260 HOH HOH A . L 5 HOH 51 351 261 HOH HOH A . L 5 HOH 52 352 262 HOH HOH A . L 5 HOH 53 353 263 HOH HOH A . L 5 HOH 54 354 264 HOH HOH A . L 5 HOH 55 355 265 HOH HOH A . L 5 HOH 56 356 266 HOH HOH A . L 5 HOH 57 357 267 HOH HOH A . L 5 HOH 58 358 268 HOH HOH A . L 5 HOH 59 359 269 HOH HOH A . L 5 HOH 60 360 270 HOH HOH A . L 5 HOH 61 361 271 HOH HOH A . L 5 HOH 62 362 272 HOH HOH A . L 5 HOH 63 363 273 HOH HOH A . L 5 HOH 64 364 274 HOH HOH A . L 5 HOH 65 365 275 HOH HOH A . L 5 HOH 66 366 276 HOH HOH A . L 5 HOH 67 367 277 HOH HOH A . L 5 HOH 68 368 278 HOH HOH A . L 5 HOH 69 369 279 HOH HOH A . L 5 HOH 70 370 280 HOH HOH A . L 5 HOH 71 371 281 HOH HOH A . L 5 HOH 72 372 282 HOH HOH A . L 5 HOH 73 373 283 HOH HOH A . L 5 HOH 74 374 284 HOH HOH A . L 5 HOH 75 375 285 HOH HOH A . L 5 HOH 76 376 286 HOH HOH A . L 5 HOH 77 377 287 HOH HOH A . L 5 HOH 78 378 288 HOH HOH A . L 5 HOH 79 379 289 HOH HOH A . L 5 HOH 80 380 290 HOH HOH A . L 5 HOH 81 381 291 HOH HOH A . L 5 HOH 82 382 292 HOH HOH A . L 5 HOH 83 383 293 HOH HOH A . L 5 HOH 84 384 294 HOH HOH A . L 5 HOH 85 385 295 HOH HOH A . L 5 HOH 86 386 296 HOH HOH A . L 5 HOH 87 387 297 HOH HOH A . L 5 HOH 88 388 298 HOH HOH A . L 5 HOH 89 389 299 HOH HOH A . L 5 HOH 90 390 300 HOH HOH A . L 5 HOH 91 391 301 HOH HOH A . L 5 HOH 92 392 302 HOH HOH A . L 5 HOH 93 393 303 HOH HOH A . L 5 HOH 94 394 304 HOH HOH A . L 5 HOH 95 395 305 HOH HOH A . L 5 HOH 96 396 306 HOH HOH A . L 5 HOH 97 397 307 HOH HOH A . L 5 HOH 98 398 308 HOH HOH A . L 5 HOH 99 399 309 HOH HOH A . L 5 HOH 100 400 310 HOH HOH A . L 5 HOH 101 401 311 HOH HOH A . L 5 HOH 102 402 312 HOH HOH A . L 5 HOH 103 403 313 HOH HOH A . L 5 HOH 104 404 314 HOH HOH A . L 5 HOH 105 405 315 HOH HOH A . L 5 HOH 106 406 316 HOH HOH A . L 5 HOH 107 407 317 HOH HOH A . L 5 HOH 108 408 318 HOH HOH A . L 5 HOH 109 409 319 HOH HOH A . L 5 HOH 110 410 320 HOH HOH A . L 5 HOH 111 411 321 HOH HOH A . L 5 HOH 112 412 322 HOH HOH A . L 5 HOH 113 413 323 HOH HOH A . L 5 HOH 114 414 324 HOH HOH A . L 5 HOH 115 415 325 HOH HOH A . L 5 HOH 116 416 326 HOH HOH A . L 5 HOH 117 417 327 HOH HOH A . L 5 HOH 118 418 328 HOH HOH A . L 5 HOH 119 419 329 HOH HOH A . L 5 HOH 120 420 330 HOH HOH A . L 5 HOH 121 421 331 HOH HOH A . L 5 HOH 122 422 332 HOH HOH A . L 5 HOH 123 423 333 HOH HOH A . L 5 HOH 124 424 334 HOH HOH A . L 5 HOH 125 425 335 HOH HOH A . L 5 HOH 126 426 336 HOH HOH A . L 5 HOH 127 427 337 HOH HOH A . L 5 HOH 128 428 338 HOH HOH A . L 5 HOH 129 429 339 HOH HOH A . L 5 HOH 130 430 340 HOH HOH A . L 5 HOH 131 431 341 HOH HOH A . L 5 HOH 132 432 342 HOH HOH A . L 5 HOH 133 433 343 HOH HOH A . L 5 HOH 134 434 344 HOH HOH A . L 5 HOH 135 435 345 HOH HOH A . L 5 HOH 136 436 346 HOH HOH A . L 5 HOH 137 437 347 HOH HOH A . L 5 HOH 138 438 348 HOH HOH A . L 5 HOH 139 439 349 HOH HOH A . L 5 HOH 140 440 350 HOH HOH A . L 5 HOH 141 441 351 HOH HOH A . L 5 HOH 142 442 352 HOH HOH A . L 5 HOH 143 443 353 HOH HOH A . L 5 HOH 144 444 354 HOH HOH A . L 5 HOH 145 445 355 HOH HOH A . L 5 HOH 146 446 356 HOH HOH A . L 5 HOH 147 447 357 HOH HOH A . L 5 HOH 148 448 358 HOH HOH A . L 5 HOH 149 449 359 HOH HOH A . L 5 HOH 150 450 360 HOH HOH A . L 5 HOH 151 451 361 HOH HOH A . L 5 HOH 152 452 362 HOH HOH A . L 5 HOH 153 453 363 HOH HOH A . L 5 HOH 154 454 364 HOH HOH A . L 5 HOH 155 455 365 HOH HOH A . L 5 HOH 156 456 366 HOH HOH A . L 5 HOH 157 457 367 HOH HOH A . L 5 HOH 158 458 368 HOH HOH A . L 5 HOH 159 459 369 HOH HOH A . L 5 HOH 160 460 370 HOH HOH A . L 5 HOH 161 461 371 HOH HOH A . L 5 HOH 162 462 372 HOH HOH A . L 5 HOH 163 463 373 HOH HOH A . L 5 HOH 164 464 374 HOH HOH A . L 5 HOH 165 465 375 HOH HOH A . L 5 HOH 166 466 376 HOH HOH A . L 5 HOH 167 467 377 HOH HOH A . L 5 HOH 168 468 378 HOH HOH A . L 5 HOH 169 469 379 HOH HOH A . L 5 HOH 170 470 380 HOH HOH A . L 5 HOH 171 471 381 HOH HOH A . L 5 HOH 172 472 382 HOH HOH A . L 5 HOH 173 473 383 HOH HOH A . L 5 HOH 174 474 384 HOH HOH A . L 5 HOH 175 475 385 HOH HOH A . L 5 HOH 176 476 386 HOH HOH A . L 5 HOH 177 477 387 HOH HOH A . L 5 HOH 178 478 388 HOH HOH A . L 5 HOH 179 479 389 HOH HOH A . L 5 HOH 180 480 390 HOH HOH A . L 5 HOH 181 481 391 HOH HOH A . L 5 HOH 182 482 392 HOH HOH A . L 5 HOH 183 483 393 HOH HOH A . L 5 HOH 184 484 394 HOH HOH A . L 5 HOH 185 485 395 HOH HOH A . L 5 HOH 186 486 396 HOH HOH A . L 5 HOH 187 487 397 HOH HOH A . L 5 HOH 188 488 398 HOH HOH A . L 5 HOH 189 489 399 HOH HOH A . L 5 HOH 190 490 400 HOH HOH A . L 5 HOH 191 491 401 HOH HOH A . L 5 HOH 192 492 402 HOH HOH A . L 5 HOH 193 493 403 HOH HOH A . L 5 HOH 194 494 404 HOH HOH A . L 5 HOH 195 495 405 HOH HOH A . L 5 HOH 196 496 406 HOH HOH A . L 5 HOH 197 497 407 HOH HOH A . L 5 HOH 198 498 408 HOH HOH A . L 5 HOH 199 499 409 HOH HOH A . L 5 HOH 200 500 410 HOH HOH A . L 5 HOH 201 501 411 HOH HOH A . L 5 HOH 202 502 412 HOH HOH A . L 5 HOH 203 503 413 HOH HOH A . L 5 HOH 204 504 414 HOH HOH A . L 5 HOH 205 505 415 HOH HOH A . L 5 HOH 206 506 416 HOH HOH A . L 5 HOH 207 507 417 HOH HOH A . L 5 HOH 208 508 418 HOH HOH A . L 5 HOH 209 509 419 HOH HOH A . L 5 HOH 210 510 420 HOH HOH A . L 5 HOH 211 511 421 HOH HOH A . L 5 HOH 212 512 422 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 124 A MSE 142 ? MET SELENOMETHIONINE 2 A MSE 146 A MSE 164 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L 2 1,2,3,4 A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 18060 ? 2 MORE -172 ? 2 'SSA (A^2)' 28380 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CL 210 ? K CL . 2 1 A HOH 402 ? L HOH . 3 1 A HOH 465 ? L HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-18 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_citation_author.name' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_struct_ref_seq_dif.details' 8 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 REFMAC 5.8.0049 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 4PUX _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 20-178 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 178 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OXT _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 178 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.088 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation -0.141 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 33 ? ? -100.08 -63.77 2 1 ASN A 41 ? ? -91.99 52.45 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 97 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.065 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLU 20 ? A GLU 2 3 1 Y 1 A THR 21 ? A THR 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'CITRIC ACID' CIT 4 'CHLORIDE ION' CL 5 water HOH #