HEADER MEMBRANE PROTEIN 21-MAR-14 4PWT TITLE CRYSTAL STRUCTURE OF PEPTIDOGLYCAN-ASSOCIATED OUTER MEMBRANE TITLE 2 LIPOPROTEIN FROM YERSINIA PESTIS CO92 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN PAL; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 214092; SOURCE 4 STRAIN: CO92; SOURCE 5 GENE: EXCC, PAL, Y3054, YPO1125, YP_1031; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS PEPTIDOGLYCAN-ASSOCIATED OUTER MEMBRANE LIPOPROTEIN, ALPHA-BETA FOLD, KEYWDS 2 STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 3 INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 4 DISEASES, CSGID, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.MALTSEVA,Y.KIM,J.OSIPIUK,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 06-DEC-23 4PWT 1 REMARK REVDAT 2 20-SEP-23 4PWT 1 REMARK SEQADV LINK REVDAT 1 09-APR-14 4PWT 0 JRNL AUTH N.MALTSEVA,Y.KIM,J.OSIPIUK,W.F.ANDERSON,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PEPTIDOGLYCAN-ASSOCIATED OUTER MEMBRANE JRNL TITL 2 LIPOPROTEIN FROM YERSINIA PESTIS CO92 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1593) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 41114 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2076 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.7871 - 4.3153 0.98 2553 121 0.1453 0.1473 REMARK 3 2 4.3153 - 3.4275 1.00 2626 151 0.1379 0.1620 REMARK 3 3 3.4275 - 2.9949 1.00 2615 141 0.1727 0.1981 REMARK 3 4 2.9949 - 2.7213 1.00 2578 158 0.1854 0.2046 REMARK 3 5 2.7213 - 2.5264 1.00 2631 137 0.1769 0.2391 REMARK 3 6 2.5264 - 2.3776 1.00 2613 156 0.1734 0.2172 REMARK 3 7 2.3776 - 2.2586 1.00 2600 128 0.1656 0.1970 REMARK 3 8 2.2586 - 2.1603 1.00 2621 134 0.1655 0.2162 REMARK 3 9 2.1603 - 2.0772 1.00 2651 136 0.1770 0.2219 REMARK 3 10 2.0772 - 2.0055 1.00 2604 111 0.1808 0.2133 REMARK 3 11 2.0055 - 1.9428 1.00 2680 130 0.1863 0.2809 REMARK 3 12 1.9428 - 1.8873 1.00 2591 142 0.2034 0.2382 REMARK 3 13 1.8873 - 1.8376 1.00 2582 145 0.2060 0.2623 REMARK 3 14 1.8376 - 1.7928 1.00 2627 131 0.1982 0.2588 REMARK 3 15 1.7928 - 1.7521 0.97 2466 155 0.2001 0.2350 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3358 REMARK 3 ANGLE : 1.060 4563 REMARK 3 CHIRALITY : 0.074 473 REMARK 3 PLANARITY : 0.004 628 REMARK 3 DIHEDRAL : 15.639 1281 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9910 41.8548 13.5368 REMARK 3 T TENSOR REMARK 3 T11: 0.2523 T22: 0.4475 REMARK 3 T33: 0.3366 T12: -0.0794 REMARK 3 T13: 0.0211 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 5.4284 L22: 5.1110 REMARK 3 L33: 3.5904 L12: 2.1260 REMARK 3 L13: -0.1946 L23: -0.7409 REMARK 3 S TENSOR REMARK 3 S11: -0.0066 S12: 0.1055 S13: 1.2291 REMARK 3 S21: -0.0025 S22: 0.2423 S23: 0.0884 REMARK 3 S31: -0.1955 S32: -0.6832 S33: 0.0530 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0163 33.7903 17.9878 REMARK 3 T TENSOR REMARK 3 T11: 0.3327 T22: 0.3801 REMARK 3 T33: 0.0704 T12: -0.1735 REMARK 3 T13: -0.0172 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 6.9637 L22: 2.2724 REMARK 3 L33: 2.9963 L12: 1.6260 REMARK 3 L13: 0.9375 L23: -0.1988 REMARK 3 S TENSOR REMARK 3 S11: -0.1189 S12: 0.1540 S13: -0.6090 REMARK 3 S21: -0.0973 S22: 0.0888 S23: -0.4524 REMARK 3 S31: 0.7711 S32: -0.4974 S33: -0.0246 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2911 35.3436 32.5109 REMARK 3 T TENSOR REMARK 3 T11: 0.1200 T22: 0.1470 REMARK 3 T33: 0.1290 T12: 0.0434 REMARK 3 T13: 0.0191 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 6.1120 L22: 1.4904 REMARK 3 L33: 2.3500 L12: 0.0916 REMARK 3 L13: 0.5124 L23: -0.8778 REMARK 3 S TENSOR REMARK 3 S11: -0.0555 S12: 0.0737 S13: 0.7608 REMARK 3 S21: 0.0395 S22: -0.0030 S23: 0.0019 REMARK 3 S31: -0.1249 S32: 0.0987 S33: 0.0370 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3130 26.0039 33.5900 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.2052 REMARK 3 T33: 0.1130 T12: 0.0751 REMARK 3 T13: 0.0089 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 8.1829 L22: 1.5957 REMARK 3 L33: 1.8398 L12: -1.8039 REMARK 3 L13: -0.1567 L23: -0.5020 REMARK 3 S TENSOR REMARK 3 S11: -0.0463 S12: 0.1407 S13: -0.2580 REMARK 3 S21: 0.0114 S22: 0.0517 S23: 0.0486 REMARK 3 S31: 0.3346 S32: 0.3827 S33: -0.0216 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1105 25.2691 28.1345 REMARK 3 T TENSOR REMARK 3 T11: 0.1803 T22: 0.2639 REMARK 3 T33: 0.1042 T12: 0.0949 REMARK 3 T13: 0.0007 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 2.0838 L22: 2.8237 REMARK 3 L33: 2.0635 L12: -1.9243 REMARK 3 L13: -1.0346 L23: 0.3235 REMARK 3 S TENSOR REMARK 3 S11: 0.0811 S12: 0.3693 S13: -0.2318 REMARK 3 S21: -0.1114 S22: -0.1376 S23: -0.1598 REMARK 3 S31: 0.2979 S32: 0.2857 S33: 0.1172 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7131 32.4226 27.3165 REMARK 3 T TENSOR REMARK 3 T11: 0.1500 T22: 0.3158 REMARK 3 T33: 0.1464 T12: 0.0557 REMARK 3 T13: 0.0321 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 6.8885 L22: 6.1352 REMARK 3 L33: 3.7127 L12: 3.9919 REMARK 3 L13: 1.6174 L23: 0.3948 REMARK 3 S TENSOR REMARK 3 S11: -0.0866 S12: 0.4852 S13: 0.3210 REMARK 3 S21: -0.2248 S22: -0.1292 S23: -0.3139 REMARK 3 S31: 0.0103 S32: 0.5143 S33: 0.1811 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0164 55.4088 45.2230 REMARK 3 T TENSOR REMARK 3 T11: 0.1729 T22: 0.2711 REMARK 3 T33: 0.4174 T12: 0.0149 REMARK 3 T13: -0.0283 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.6339 L22: 4.6464 REMARK 3 L33: 4.4850 L12: 1.7062 REMARK 3 L13: 1.6961 L23: 4.5009 REMARK 3 S TENSOR REMARK 3 S11: -0.0618 S12: 0.5298 S13: 0.5370 REMARK 3 S21: -0.2870 S22: -0.0784 S23: -0.5056 REMARK 3 S31: -0.4110 S32: 0.1832 S33: 0.2030 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9031 50.8170 38.2122 REMARK 3 T TENSOR REMARK 3 T11: 0.1499 T22: 0.1753 REMARK 3 T33: 0.1633 T12: 0.0387 REMARK 3 T13: -0.0143 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 6.2131 L22: 0.9718 REMARK 3 L33: 6.3225 L12: -0.1820 REMARK 3 L13: 6.0066 L23: -0.9241 REMARK 3 S TENSOR REMARK 3 S11: 0.1199 S12: -0.0397 S13: 0.1226 REMARK 3 S21: 0.0451 S22: -0.0679 S23: -0.1366 REMARK 3 S31: 0.3005 S32: 0.1222 S33: 0.0511 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 68 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5934 51.5451 26.1555 REMARK 3 T TENSOR REMARK 3 T11: 0.1228 T22: 0.1559 REMARK 3 T33: 0.2022 T12: -0.0148 REMARK 3 T13: -0.0092 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 5.4349 L22: 0.6440 REMARK 3 L33: 1.7232 L12: -0.3968 REMARK 3 L13: 1.8140 L23: -0.0041 REMARK 3 S TENSOR REMARK 3 S11: -0.2239 S12: 0.0741 S13: 0.5346 REMARK 3 S21: -0.0490 S22: 0.0856 S23: -0.1091 REMARK 3 S31: -0.1633 S32: 0.1994 S33: 0.1341 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.2426 45.4958 23.4842 REMARK 3 T TENSOR REMARK 3 T11: 0.1130 T22: 0.0962 REMARK 3 T33: 0.1204 T12: 0.0037 REMARK 3 T13: -0.0039 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 7.4579 L22: 0.7506 REMARK 3 L33: 2.0817 L12: -0.8138 REMARK 3 L13: 1.7073 L23: -0.1165 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: 0.0750 S13: -0.2113 REMARK 3 S21: -0.0568 S22: 0.0336 S23: 0.0291 REMARK 3 S31: 0.0139 S32: 0.0869 S33: -0.0560 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.4161 53.7812 32.1850 REMARK 3 T TENSOR REMARK 3 T11: 0.1912 T22: 0.4029 REMARK 3 T33: 0.2552 T12: 0.0746 REMARK 3 T13: -0.0117 T23: -0.0494 REMARK 3 L TENSOR REMARK 3 L11: 6.0980 L22: 7.8439 REMARK 3 L33: 3.3285 L12: -2.0964 REMARK 3 L13: -0.1140 L23: -0.1830 REMARK 3 S TENSOR REMARK 3 S11: -0.2588 S12: -1.0114 S13: 0.4031 REMARK 3 S21: 0.5239 S22: 0.0644 S23: 0.5545 REMARK 3 S31: -0.3481 S32: -0.3682 S33: 0.0417 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.9201 50.4402 31.1049 REMARK 3 T TENSOR REMARK 3 T11: 0.1129 T22: 0.1901 REMARK 3 T33: 0.1586 T12: 0.0310 REMARK 3 T13: -0.0322 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.4276 L22: 6.0031 REMARK 3 L33: 3.8851 L12: -3.5210 REMARK 3 L13: 2.0442 L23: -1.7596 REMARK 3 S TENSOR REMARK 3 S11: -0.1909 S12: -0.4713 S13: 0.0790 REMARK 3 S21: 0.1621 S22: 0.0852 S23: 0.0683 REMARK 3 S31: -0.1236 S32: -0.2342 S33: 0.2858 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 46 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.1865 1.6479 35.4096 REMARK 3 T TENSOR REMARK 3 T11: 0.4099 T22: 0.2793 REMARK 3 T33: 0.2064 T12: 0.0087 REMARK 3 T13: -0.1013 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 5.4616 L22: 6.3995 REMARK 3 L33: 8.1009 L12: 2.6828 REMARK 3 L13: -0.6256 L23: 0.3434 REMARK 3 S TENSOR REMARK 3 S11: 0.5616 S12: -0.2604 S13: -0.3722 REMARK 3 S21: 1.3700 S22: -0.3039 S23: -0.4571 REMARK 3 S31: 0.9449 S32: -0.0689 S33: -0.2227 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 61 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.6656 16.3691 50.2076 REMARK 3 T TENSOR REMARK 3 T11: 0.1427 T22: 0.0899 REMARK 3 T33: 0.0966 T12: -0.0003 REMARK 3 T13: 0.0153 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.5228 L22: 5.1755 REMARK 3 L33: 2.2063 L12: 1.3345 REMARK 3 L13: 0.6256 L23: 1.0983 REMARK 3 S TENSOR REMARK 3 S11: 0.0641 S12: -0.0722 S13: -0.0580 REMARK 3 S21: -0.0012 S22: -0.0635 S23: 0.0883 REMARK 3 S31: 0.2495 S32: -0.1235 S33: 0.0152 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 145 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1049 28.1288 43.7132 REMARK 3 T TENSOR REMARK 3 T11: 0.1402 T22: 0.1145 REMARK 3 T33: 0.1060 T12: -0.0050 REMARK 3 T13: -0.0130 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 4.4877 L22: 6.5081 REMARK 3 L33: 3.9343 L12: -0.4999 REMARK 3 L13: -0.2724 L23: -0.2280 REMARK 3 S TENSOR REMARK 3 S11: -0.0903 S12: 0.1342 S13: 0.3299 REMARK 3 S21: -0.1520 S22: 0.0915 S23: -0.0695 REMARK 3 S31: -0.3263 S32: 0.1535 S33: -0.0055 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PWT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085317. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41239 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.72700 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: 1OAP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 0.1M BIS-TRIS PH REMARK 280 5.5, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.98900 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.97800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 SER B -2 REMARK 465 SER C 38 REMARK 465 ASN C 39 REMARK 465 ALA C 40 REMARK 465 THR C 41 REMARK 465 GLU C 42 REMARK 465 ASN C 43 REMARK 465 GLY C 44 REMARK 465 SER C 45 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 0 -116.25 53.51 REMARK 500 ASN A 64 21.43 -141.68 REMARK 500 ASP A 71 -0.25 66.68 REMARK 500 ASP A 105 78.21 -154.00 REMARK 500 ALA B 0 -125.86 55.01 REMARK 500 ASN B 64 23.44 -144.66 REMARK 500 TYR B 73 24.04 -140.99 REMARK 500 ASP B 105 73.48 -159.57 REMARK 500 ASN C 63 73.48 -105.76 REMARK 500 ASN C 63 72.22 -110.31 REMARK 500 ASP C 105 72.77 -157.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE POP C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP00403 RELATED DB: TARGETTRACK DBREF 4PWT A -2 168 UNP Q7CH55 Q7CH55_YERPE 24 168 DBREF 4PWT B -2 168 UNP Q7CH55 Q7CH55_YERPE 24 168 DBREF 4PWT C 38 168 UNP Q7CH55 Q7CH55_YERPE 24 168 SEQADV 4PWT A UNP Q7CH55 LYS 26 DELETION SEQADV 4PWT A UNP Q7CH55 SER 27 DELETION SEQADV 4PWT A UNP Q7CH55 ALA 28 DELETION SEQADV 4PWT A UNP Q7CH55 ASN 29 DELETION SEQADV 4PWT A UNP Q7CH55 ASN 30 DELETION SEQADV 4PWT A UNP Q7CH55 ASP 31 DELETION SEQADV 4PWT A UNP Q7CH55 GLN 32 DELETION SEQADV 4PWT A UNP Q7CH55 SER 33 DELETION SEQADV 4PWT A UNP Q7CH55 GLY 34 DELETION SEQADV 4PWT A UNP Q7CH55 MET 35 DELETION SEQADV 4PWT A UNP Q7CH55 GLY 36 DELETION SEQADV 4PWT A UNP Q7CH55 GLY 38 DELETION SEQADV 4PWT A UNP Q7CH55 THR 39 DELETION SEQADV 4PWT A UNP Q7CH55 GLY 40 DELETION SEQADV 4PWT B UNP Q7CH55 LYS 26 DELETION SEQADV 4PWT B UNP Q7CH55 SER 27 DELETION SEQADV 4PWT B UNP Q7CH55 ALA 28 DELETION SEQADV 4PWT B UNP Q7CH55 ASN 29 DELETION SEQADV 4PWT B UNP Q7CH55 ASN 30 DELETION SEQADV 4PWT B UNP Q7CH55 ASP 31 DELETION SEQADV 4PWT B UNP Q7CH55 GLN 32 DELETION SEQADV 4PWT B UNP Q7CH55 SER 33 DELETION SEQADV 4PWT B UNP Q7CH55 GLY 34 DELETION SEQADV 4PWT B UNP Q7CH55 MET 35 DELETION SEQADV 4PWT B UNP Q7CH55 GLY 36 DELETION SEQADV 4PWT B UNP Q7CH55 GLY 38 DELETION SEQADV 4PWT B UNP Q7CH55 THR 39 DELETION SEQADV 4PWT B UNP Q7CH55 GLY 40 DELETION SEQADV 4PWT C UNP Q7CH55 LYS 26 DELETION SEQADV 4PWT C UNP Q7CH55 SER 27 DELETION SEQADV 4PWT C UNP Q7CH55 ALA 28 DELETION SEQADV 4PWT C UNP Q7CH55 ASN 29 DELETION SEQADV 4PWT C UNP Q7CH55 ASN 30 DELETION SEQADV 4PWT C UNP Q7CH55 ASP 31 DELETION SEQADV 4PWT C UNP Q7CH55 GLN 32 DELETION SEQADV 4PWT C UNP Q7CH55 SER 33 DELETION SEQADV 4PWT C UNP Q7CH55 GLY 34 DELETION SEQADV 4PWT C UNP Q7CH55 MET 35 DELETION SEQADV 4PWT C UNP Q7CH55 GLY 36 DELETION SEQADV 4PWT C UNP Q7CH55 GLY 38 DELETION SEQADV 4PWT C UNP Q7CH55 THR 39 DELETION SEQADV 4PWT C UNP Q7CH55 GLY 40 DELETION SEQRES 1 A 131 SER ASN ALA THR GLU ASN GLY SER ASN LEU SER SER GLU SEQRES 2 A 131 GLU GLN ALA ARG LEU GLN MSE GLN GLU LEU GLN LYS ASN SEQRES 3 A 131 ASN ILE VAL TYR PHE GLY PHE ASP LYS TYR ASP ILE GLY SEQRES 4 A 131 SER ASP PHE ALA GLN MSE LEU ASP ALA HIS ALA ALA PHE SEQRES 5 A 131 LEU ARG SER ASN PRO SER ASP LYS VAL VAL VAL GLU GLY SEQRES 6 A 131 HIS ALA ASP GLU ARG GLY THR PRO GLU TYR ASN ILE ALA SEQRES 7 A 131 LEU GLY GLU ARG ARG ALA SER ALA VAL LYS MSE TYR LEU SEQRES 8 A 131 GLN GLY LYS GLY VAL SER ALA ASP GLN ILE SER ILE VAL SEQRES 9 A 131 SER TYR GLY LYS GLU LYS PRO ALA VAL LEU GLY HIS ASP SEQRES 10 A 131 GLU ALA ALA PHE ALA LYS ASN ARG ARG ALA VAL LEU VAL SEQRES 11 A 131 TYR SEQRES 1 B 131 SER ASN ALA THR GLU ASN GLY SER ASN LEU SER SER GLU SEQRES 2 B 131 GLU GLN ALA ARG LEU GLN MSE GLN GLU LEU GLN LYS ASN SEQRES 3 B 131 ASN ILE VAL TYR PHE GLY PHE ASP LYS TYR ASP ILE GLY SEQRES 4 B 131 SER ASP PHE ALA GLN MSE LEU ASP ALA HIS ALA ALA PHE SEQRES 5 B 131 LEU ARG SER ASN PRO SER ASP LYS VAL VAL VAL GLU GLY SEQRES 6 B 131 HIS ALA ASP GLU ARG GLY THR PRO GLU TYR ASN ILE ALA SEQRES 7 B 131 LEU GLY GLU ARG ARG ALA SER ALA VAL LYS MSE TYR LEU SEQRES 8 B 131 GLN GLY LYS GLY VAL SER ALA ASP GLN ILE SER ILE VAL SEQRES 9 B 131 SER TYR GLY LYS GLU LYS PRO ALA VAL LEU GLY HIS ASP SEQRES 10 B 131 GLU ALA ALA PHE ALA LYS ASN ARG ARG ALA VAL LEU VAL SEQRES 11 B 131 TYR SEQRES 1 C 131 SER ASN ALA THR GLU ASN GLY SER ASN LEU SER SER GLU SEQRES 2 C 131 GLU GLN ALA ARG LEU GLN MSE GLN GLU LEU GLN LYS ASN SEQRES 3 C 131 ASN ILE VAL TYR PHE GLY PHE ASP LYS TYR ASP ILE GLY SEQRES 4 C 131 SER ASP PHE ALA GLN MSE LEU ASP ALA HIS ALA ALA PHE SEQRES 5 C 131 LEU ARG SER ASN PRO SER ASP LYS VAL VAL VAL GLU GLY SEQRES 6 C 131 HIS ALA ASP GLU ARG GLY THR PRO GLU TYR ASN ILE ALA SEQRES 7 C 131 LEU GLY GLU ARG ARG ALA SER ALA VAL LYS MSE TYR LEU SEQRES 8 C 131 GLN GLY LYS GLY VAL SER ALA ASP GLN ILE SER ILE VAL SEQRES 9 C 131 SER TYR GLY LYS GLU LYS PRO ALA VAL LEU GLY HIS ASP SEQRES 10 C 131 GLU ALA ALA PHE ALA LYS ASN ARG ARG ALA VAL LEU VAL SEQRES 11 C 131 TYR MODRES 4PWT MSE A 57 MET SELENOMETHIONINE MODRES 4PWT MSE A 82 MET SELENOMETHIONINE MODRES 4PWT MSE A 126 MET SELENOMETHIONINE MODRES 4PWT MSE B 57 MET SELENOMETHIONINE MODRES 4PWT MSE B 82 MET SELENOMETHIONINE MODRES 4PWT MSE B 126 MET SELENOMETHIONINE MODRES 4PWT MSE C 57 MET SELENOMETHIONINE MODRES 4PWT MSE C 82 MET SELENOMETHIONINE MODRES 4PWT MSE C 126 MET SELENOMETHIONINE HET MSE A 57 16 HET MSE A 82 16 HET MSE A 126 8 HET MSE B 57 16 HET MSE B 82 16 HET MSE B 126 8 HET MSE C 57 16 HET MSE C 82 16 HET MSE C 126 16 HET SO4 A 200 5 HET SO4 A 201 5 HET FMT C 201 3 HET POP C 202 9 HET FMT C 203 3 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM FMT FORMIC ACID HETNAM POP PYROPHOSPHATE 2- FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 FMT 2(C H2 O2) FORMUL 7 POP H2 O7 P2 2- FORMUL 9 HOH *239(H2 O) HELIX 1 1 ASN A -1 ASN A 43 5 5 HELIX 2 2 SER A 48 GLN A 61 1 14 HELIX 3 3 GLY A 76 ASP A 78 5 3 HELIX 4 4 PHE A 79 ASN A 93 1 15 HELIX 5 5 THR A 109 LYS A 131 1 23 HELIX 6 6 SER A 134 ASP A 136 5 3 HELIX 7 7 ASP A 154 ARG A 162 1 9 HELIX 8 8 ASN B -1 ASN B 43 5 5 HELIX 9 9 SER B 48 GLN B 61 1 14 HELIX 10 10 GLY B 76 ASP B 78 5 3 HELIX 11 11 PHE B 79 ASN B 93 1 15 HELIX 12 12 THR B 109 LYS B 131 1 23 HELIX 13 13 SER B 134 ASP B 136 5 3 HELIX 14 14 ASP B 154 ARG B 162 1 9 HELIX 15 15 SER C 48 GLN C 61 1 14 HELIX 16 16 GLY C 76 ASN C 93 1 18 HELIX 17 17 THR C 109 GLY C 132 1 24 HELIX 18 18 SER C 134 ASP C 136 5 3 HELIX 19 19 ASP C 154 ASN C 161 1 8 SHEET 1 A 4 ILE A 65 TYR A 67 0 SHEET 2 A 4 ARG A 163 VAL A 167 -1 O ALA A 164 N VAL A 66 SHEET 3 A 4 VAL A 98 HIS A 103 -1 N VAL A 99 O VAL A 167 SHEET 4 A 4 ILE A 138 GLY A 144 1 O TYR A 143 N GLY A 102 SHEET 1 B 4 ILE B 65 TYR B 67 0 SHEET 2 B 4 ARG B 163 VAL B 167 -1 O ALA B 164 N VAL B 66 SHEET 3 B 4 VAL B 98 GLY B 102 -1 N VAL B 99 O VAL B 167 SHEET 4 B 4 ILE B 138 SER B 142 1 O VAL B 141 N GLY B 102 SHEET 1 C 4 ILE C 65 TYR C 67 0 SHEET 2 C 4 ARG C 163 VAL C 167 -1 O ALA C 164 N VAL C 66 SHEET 3 C 4 VAL C 98 GLY C 102 -1 N VAL C 99 O VAL C 167 SHEET 4 C 4 ILE C 138 SER C 142 1 O SER C 139 N VAL C 100 LINK C AGLN A 56 N AMSE A 57 1555 1555 1.33 LINK C BGLN A 56 N BMSE A 57 1555 1555 1.33 LINK C AMSE A 57 N GLN A 58 1555 1555 1.32 LINK C BMSE A 57 N GLN A 58 1555 1555 1.34 LINK C GLN A 81 N AMSE A 82 1555 1555 1.33 LINK C GLN A 81 N BMSE A 82 1555 1555 1.33 LINK C AMSE A 82 N LEU A 83 1555 1555 1.33 LINK C BMSE A 82 N LEU A 83 1555 1555 1.33 LINK C LYS A 125 N MSE A 126 1555 1555 1.32 LINK C MSE A 126 N TYR A 127 1555 1555 1.33 LINK C AGLN B 56 N AMSE B 57 1555 1555 1.33 LINK C BGLN B 56 N BMSE B 57 1555 1555 1.33 LINK C AMSE B 57 N GLN B 58 1555 1555 1.33 LINK C BMSE B 57 N GLN B 58 1555 1555 1.33 LINK C GLN B 81 N AMSE B 82 1555 1555 1.33 LINK C GLN B 81 N BMSE B 82 1555 1555 1.33 LINK C AMSE B 82 N LEU B 83 1555 1555 1.33 LINK C BMSE B 82 N LEU B 83 1555 1555 1.33 LINK C LYS B 125 N MSE B 126 1555 1555 1.33 LINK C MSE B 126 N TYR B 127 1555 1555 1.33 LINK C GLN C 56 N AMSE C 57 1555 1555 1.33 LINK C GLN C 56 N BMSE C 57 1555 1555 1.33 LINK C AMSE C 57 N GLN C 58 1555 1555 1.33 LINK C BMSE C 57 N GLN C 58 1555 1555 1.33 LINK C GLN C 81 N AMSE C 82 1555 1555 1.33 LINK C GLN C 81 N BMSE C 82 1555 1555 1.33 LINK C AMSE C 82 N LEU C 83 1555 1555 1.33 LINK C BMSE C 82 N LEU C 83 1555 1555 1.33 LINK C LYS C 125 N AMSE C 126 1555 1555 1.33 LINK C LYS C 125 N BMSE C 126 1555 1555 1.34 LINK C AMSE C 126 N TYR C 127 1555 1555 1.33 LINK C BMSE C 126 N TYR C 127 1555 1555 1.33 SITE 1 AC1 4 ARG A 91 LYS B 97 VAL C 150 LEU C 151 SITE 1 AC2 4 SER A 134 ALA A 135 ASP A 136 LYS C 147 SITE 1 AC3 4 MSE A 126 GLN A 129 GLY A 130 GLU C 146 SITE 1 AC4 10 PHE B 70 GLU B 106 ARG B 107 GLU B 155 SITE 2 AC4 10 ARG B 162 PHE C 70 GLU C 106 ARG C 107 SITE 3 AC4 10 GLU C 155 ARG C 162 SITE 1 AC5 4 ALA C 115 GLU C 118 ARG C 119 HOH C 366 CRYST1 65.015 65.015 86.967 90.00 90.00 120.00 P 31 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015381 0.008880 0.000000 0.00000 SCALE2 0.000000 0.017761 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011499 0.00000