data_4PXA # _entry.id 4PXA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PXA pdb_00004pxa 10.2210/pdb4pxa/pdb RCSB RCSB085334 ? ? WWPDB D_1000085334 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4PX9 _pdbx_database_related.details 'DDX3X wild-type D1' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4PXA _pdbx_database_status.recvd_initial_deposition_date 2014-03-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Epling, L.B.' 1 'Grace, C.R.' 2 'Lowe, B.R.' 3 'Partridge, J.F.' 4 'Enemark, E.J.' 5 # _citation.id primary _citation.title 'Cancer-Associated Mutants of RNA Helicase DDX3X Are Defective in RNA-Stimulated ATP Hydrolysis.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 427 _citation.page_first 1779 _citation.page_last 1796 _citation.year 2015 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25724843 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2015.02.015 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Epling, L.B.' 1 ? primary 'Grace, C.R.' 2 ? primary 'Lowe, B.R.' 3 ? primary 'Partridge, J.F.' 4 ? primary 'Enemark, E.J.' 5 ? # _cell.entry_id 4PXA _cell.length_a 105.755 _cell.length_b 105.755 _cell.length_c 152.633 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4PXA _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ATP-dependent RNA helicase DDX3X' 52690.891 1 3.6.4.13 D354V 'D1-D2, UNP residues 135-582' ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 5 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DEAD box protein 3, X-chromosomal, DEAD box, X isoform, Helicase-like protein 2, HLP2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI ELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPT RELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLVM GFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVIN FDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI ELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPT RELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLVM GFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL NATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVIN FDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 ASP n 1 21 TRP n 1 22 SER n 1 23 LYS n 1 24 PRO n 1 25 LEU n 1 26 PRO n 1 27 PRO n 1 28 SER n 1 29 GLU n 1 30 ARG n 1 31 LEU n 1 32 GLU n 1 33 GLN n 1 34 GLU n 1 35 LEU n 1 36 PHE n 1 37 SER n 1 38 GLY n 1 39 GLY n 1 40 ASN n 1 41 THR n 1 42 GLY n 1 43 ILE n 1 44 ASN n 1 45 PHE n 1 46 GLU n 1 47 LYS n 1 48 TYR n 1 49 ASP n 1 50 ASP n 1 51 ILE n 1 52 PRO n 1 53 VAL n 1 54 GLU n 1 55 ALA n 1 56 THR n 1 57 GLY n 1 58 ASN n 1 59 ASN n 1 60 CYS n 1 61 PRO n 1 62 PRO n 1 63 HIS n 1 64 ILE n 1 65 GLU n 1 66 SER n 1 67 PHE n 1 68 SER n 1 69 ASP n 1 70 VAL n 1 71 GLU n 1 72 MET n 1 73 GLY n 1 74 GLU n 1 75 ILE n 1 76 ILE n 1 77 MET n 1 78 GLY n 1 79 ASN n 1 80 ILE n 1 81 GLU n 1 82 LEU n 1 83 THR n 1 84 ARG n 1 85 TYR n 1 86 THR n 1 87 ARG n 1 88 PRO n 1 89 THR n 1 90 PRO n 1 91 VAL n 1 92 GLN n 1 93 LYS n 1 94 HIS n 1 95 ALA n 1 96 ILE n 1 97 PRO n 1 98 ILE n 1 99 ILE n 1 100 LYS n 1 101 GLU n 1 102 LYS n 1 103 ARG n 1 104 ASP n 1 105 LEU n 1 106 MET n 1 107 ALA n 1 108 CYS n 1 109 ALA n 1 110 GLN n 1 111 THR n 1 112 GLY n 1 113 SER n 1 114 GLY n 1 115 LYS n 1 116 THR n 1 117 ALA n 1 118 ALA n 1 119 PHE n 1 120 LEU n 1 121 LEU n 1 122 PRO n 1 123 ILE n 1 124 LEU n 1 125 SER n 1 126 GLN n 1 127 ILE n 1 128 TYR n 1 129 SER n 1 130 ASP n 1 131 GLY n 1 132 PRO n 1 133 GLY n 1 134 GLU n 1 135 ALA n 1 136 LEU n 1 137 ARG n 1 138 ALA n 1 139 MET n 1 140 LYS n 1 141 GLU n 1 142 ASN n 1 143 GLY n 1 144 ARG n 1 145 TYR n 1 146 GLY n 1 147 ARG n 1 148 ARG n 1 149 LYS n 1 150 GLN n 1 151 TYR n 1 152 PRO n 1 153 ILE n 1 154 SER n 1 155 LEU n 1 156 VAL n 1 157 LEU n 1 158 ALA n 1 159 PRO n 1 160 THR n 1 161 ARG n 1 162 GLU n 1 163 LEU n 1 164 ALA n 1 165 VAL n 1 166 GLN n 1 167 ILE n 1 168 TYR n 1 169 GLU n 1 170 GLU n 1 171 ALA n 1 172 ARG n 1 173 LYS n 1 174 PHE n 1 175 SER n 1 176 TYR n 1 177 ARG n 1 178 SER n 1 179 ARG n 1 180 VAL n 1 181 ARG n 1 182 PRO n 1 183 CYS n 1 184 VAL n 1 185 VAL n 1 186 TYR n 1 187 GLY n 1 188 GLY n 1 189 ALA n 1 190 ASP n 1 191 ILE n 1 192 GLY n 1 193 GLN n 1 194 GLN n 1 195 ILE n 1 196 ARG n 1 197 ASP n 1 198 LEU n 1 199 GLU n 1 200 ARG n 1 201 GLY n 1 202 CYS n 1 203 HIS n 1 204 LEU n 1 205 LEU n 1 206 VAL n 1 207 ALA n 1 208 THR n 1 209 PRO n 1 210 GLY n 1 211 ARG n 1 212 LEU n 1 213 VAL n 1 214 ASP n 1 215 MET n 1 216 MET n 1 217 GLU n 1 218 ARG n 1 219 GLY n 1 220 LYS n 1 221 ILE n 1 222 GLY n 1 223 LEU n 1 224 ASP n 1 225 PHE n 1 226 CYS n 1 227 LYS n 1 228 TYR n 1 229 LEU n 1 230 VAL n 1 231 LEU n 1 232 ASP n 1 233 GLU n 1 234 ALA n 1 235 ASP n 1 236 ARG n 1 237 MET n 1 238 LEU n 1 239 VAL n 1 240 MET n 1 241 GLY n 1 242 PHE n 1 243 GLU n 1 244 PRO n 1 245 GLN n 1 246 ILE n 1 247 ARG n 1 248 ARG n 1 249 ILE n 1 250 VAL n 1 251 GLU n 1 252 GLN n 1 253 ASP n 1 254 THR n 1 255 MET n 1 256 PRO n 1 257 PRO n 1 258 LYS n 1 259 GLY n 1 260 VAL n 1 261 ARG n 1 262 HIS n 1 263 THR n 1 264 MET n 1 265 MET n 1 266 PHE n 1 267 SER n 1 268 ALA n 1 269 THR n 1 270 PHE n 1 271 PRO n 1 272 LYS n 1 273 GLU n 1 274 ILE n 1 275 GLN n 1 276 MET n 1 277 LEU n 1 278 ALA n 1 279 ARG n 1 280 ASP n 1 281 PHE n 1 282 LEU n 1 283 ASP n 1 284 GLU n 1 285 TYR n 1 286 ILE n 1 287 PHE n 1 288 LEU n 1 289 ALA n 1 290 VAL n 1 291 GLY n 1 292 ARG n 1 293 VAL n 1 294 GLY n 1 295 SER n 1 296 THR n 1 297 SER n 1 298 GLU n 1 299 ASN n 1 300 ILE n 1 301 THR n 1 302 GLN n 1 303 LYS n 1 304 VAL n 1 305 VAL n 1 306 TRP n 1 307 VAL n 1 308 GLU n 1 309 GLU n 1 310 SER n 1 311 ASP n 1 312 LYS n 1 313 ARG n 1 314 SER n 1 315 PHE n 1 316 LEU n 1 317 LEU n 1 318 ASP n 1 319 LEU n 1 320 LEU n 1 321 ASN n 1 322 ALA n 1 323 THR n 1 324 GLY n 1 325 LYS n 1 326 ASP n 1 327 SER n 1 328 LEU n 1 329 THR n 1 330 LEU n 1 331 VAL n 1 332 PHE n 1 333 VAL n 1 334 GLU n 1 335 THR n 1 336 LYS n 1 337 LYS n 1 338 GLY n 1 339 ALA n 1 340 ASP n 1 341 SER n 1 342 LEU n 1 343 GLU n 1 344 ASP n 1 345 PHE n 1 346 LEU n 1 347 TYR n 1 348 HIS n 1 349 GLU n 1 350 GLY n 1 351 TYR n 1 352 ALA n 1 353 CYS n 1 354 THR n 1 355 SER n 1 356 ILE n 1 357 HIS n 1 358 GLY n 1 359 ASP n 1 360 ARG n 1 361 SER n 1 362 GLN n 1 363 ARG n 1 364 ASP n 1 365 ARG n 1 366 GLU n 1 367 GLU n 1 368 ALA n 1 369 LEU n 1 370 HIS n 1 371 GLN n 1 372 PHE n 1 373 ARG n 1 374 SER n 1 375 GLY n 1 376 LYS n 1 377 SER n 1 378 PRO n 1 379 ILE n 1 380 LEU n 1 381 VAL n 1 382 ALA n 1 383 THR n 1 384 ALA n 1 385 VAL n 1 386 ALA n 1 387 ALA n 1 388 ARG n 1 389 GLY n 1 390 LEU n 1 391 ASP n 1 392 ILE n 1 393 SER n 1 394 ASN n 1 395 VAL n 1 396 LYS n 1 397 HIS n 1 398 VAL n 1 399 ILE n 1 400 ASN n 1 401 PHE n 1 402 ASP n 1 403 LEU n 1 404 PRO n 1 405 SER n 1 406 ASP n 1 407 ILE n 1 408 GLU n 1 409 GLU n 1 410 TYR n 1 411 VAL n 1 412 HIS n 1 413 ARG n 1 414 ILE n 1 415 GLY n 1 416 ARG n 1 417 THR n 1 418 GLY n 1 419 ARG n 1 420 VAL n 1 421 GLY n 1 422 ASN n 1 423 LEU n 1 424 GLY n 1 425 LEU n 1 426 ALA n 1 427 THR n 1 428 SER n 1 429 PHE n 1 430 PHE n 1 431 ASN n 1 432 GLU n 1 433 ARG n 1 434 ASN n 1 435 ILE n 1 436 ASN n 1 437 ILE n 1 438 THR n 1 439 LYS n 1 440 ASP n 1 441 LEU n 1 442 LEU n 1 443 ASP n 1 444 LEU n 1 445 LEU n 1 446 VAL n 1 447 GLU n 1 448 ALA n 1 449 LYS n 1 450 GLN n 1 451 GLU n 1 452 VAL n 1 453 PRO n 1 454 SER n 1 455 TRP n 1 456 LEU n 1 457 GLU n 1 458 ASN n 1 459 MET n 1 460 ALA n 1 461 TYR n 1 462 GLU n 1 463 HIS n 1 464 HIS n 1 465 TYR n 1 466 LYS n 1 467 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DBX, DDX3, DDX3X' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-RIPL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pLE230 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DDX3X_HUMAN _struct_ref.pdbx_db_accession O00571 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPII KEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSR VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKG VRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGA DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR VGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG ; _struct_ref.pdbx_align_begin 135 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4PXA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 467 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O00571 _struct_ref_seq.db_align_beg 135 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 582 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 135 _struct_ref_seq.pdbx_auth_seq_align_end 582 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4PXA MET A 1 ? UNP O00571 ? ? 'expression tag' 116 1 1 4PXA GLY A 2 ? UNP O00571 ? ? 'expression tag' 117 2 1 4PXA SER A 3 ? UNP O00571 ? ? 'expression tag' 118 3 1 4PXA SER A 4 ? UNP O00571 ? ? 'expression tag' 119 4 1 4PXA HIS A 5 ? UNP O00571 ? ? 'expression tag' 120 5 1 4PXA HIS A 6 ? UNP O00571 ? ? 'expression tag' 121 6 1 4PXA HIS A 7 ? UNP O00571 ? ? 'expression tag' 122 7 1 4PXA HIS A 8 ? UNP O00571 ? ? 'expression tag' 123 8 1 4PXA HIS A 9 ? UNP O00571 ? ? 'expression tag' 124 9 1 4PXA HIS A 10 ? UNP O00571 ? ? 'expression tag' 125 10 1 4PXA SER A 11 ? UNP O00571 ? ? 'expression tag' 126 11 1 4PXA SER A 12 ? UNP O00571 ? ? 'expression tag' 127 12 1 4PXA GLY A 13 ? UNP O00571 ? ? 'expression tag' 128 13 1 4PXA LEU A 14 ? UNP O00571 ? ? 'expression tag' 129 14 1 4PXA VAL A 15 ? UNP O00571 ? ? 'expression tag' 130 15 1 4PXA PRO A 16 ? UNP O00571 ? ? 'expression tag' 131 16 1 4PXA ARG A 17 ? UNP O00571 ? ? 'expression tag' 132 17 1 4PXA GLY A 18 ? UNP O00571 ? ? 'expression tag' 133 18 1 4PXA SER A 19 ? UNP O00571 ? ? 'expression tag' 134 19 1 4PXA VAL A 239 ? UNP O00571 ASP 354 'engineered mutation' 354 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4PXA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.06 _exptl_crystal.density_percent_sol 69.68 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details ;1.66 M NaH2PO4 0.24 M K2HPO4, VAPOR DIFFUSION, HANGING DROP, temperature 291.0K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2013-03-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 4PXA _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F . _reflns.d_resolution_low 50 _reflns.d_resolution_high 3.20 _reflns.number_obs 14993 _reflns.number_all 14996 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.128 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 37.19 _reflns.B_iso_Wilson_estimate . _reflns.pdbx_redundancy 14.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.20 _reflns_shell.d_res_low 3.31 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.641 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.71 _reflns_shell.pdbx_redundancy 14.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1451 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4PXA _refine.ls_number_reflns_obs 14843 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1825880.70 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.85 _refine.ls_d_res_high 3.20 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.206 _refine.ls_R_factor_R_free 0.271 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 718 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 97.1 _refine.aniso_B[1][1] -0.96 _refine.aniso_B[2][2] -0.96 _refine.aniso_B[3][3] 1.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.33 _refine.solvent_model_param_bsol 73.1176 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRIES 4PX9 AND 2JGN' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model GROUP _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4PXA _refine_analyze.Luzzati_coordinate_error_obs 0.34 _refine_analyze.Luzzati_sigma_a_obs 0.47 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.48 _refine_analyze.Luzzati_sigma_a_free 0.63 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3495 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3547 _refine_hist.d_res_high 3.20 _refine_hist.d_res_low 45.85 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.008 ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.5 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 22.4 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 0.86 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d_na ? ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d_prot ? ? ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' c_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' c_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' c_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details NONE _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_asym_id ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 3.20 _refine_ls_shell.d_res_low 3.31 _refine_ls_shell.number_reflns_R_work 1338 _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.percent_reflns_obs 98.5 _refine_ls_shell.R_factor_R_free 0.377 _refine_ls_shell.R_factor_R_free_error 0.041 _refine_ls_shell.percent_reflns_R_free 5.8 _refine_ls_shell.number_reflns_R_free 83 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 carbohydrate.param carbohydrate.top 'X-RAY DIFFRACTION' 6 adp.param adp.top 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 4PXA _struct.title 'DEAD-box RNA helicase DDX3X Cancer-associated mutant D354V' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4PXA _struct_keywords.pdbx_keywords 'TRANSLATION, RNA BINDING PROTEIN' _struct_keywords.text 'DEAD-box helicase, HYDROLASE, TRANSLATION, RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 28 ? PHE A 36 ? SER A 143 PHE A 151 1 ? 9 HELX_P HELX_P2 2 MET A 72 ? THR A 83 ? MET A 187 THR A 198 1 ? 12 HELX_P HELX_P3 3 THR A 89 ? GLU A 101 ? THR A 204 GLU A 216 1 ? 13 HELX_P HELX_P4 4 GLY A 114 ? GLY A 131 ? GLY A 229 GLY A 246 1 ? 18 HELX_P HELX_P5 5 GLY A 133 ? GLU A 141 ? GLY A 248 GLU A 256 1 ? 9 HELX_P HELX_P6 6 THR A 160 ? SER A 175 ? THR A 275 SER A 290 1 ? 16 HELX_P HELX_P7 7 ASP A 190 ? ARG A 200 ? ASP A 305 ARG A 315 1 ? 11 HELX_P HELX_P8 8 THR A 208 ? ARG A 218 ? THR A 323 ARG A 333 1 ? 11 HELX_P HELX_P9 9 GLU A 233 ? MET A 240 ? GLU A 348 MET A 355 1 ? 8 HELX_P HELX_P10 10 PHE A 242 ? GLU A 251 ? PHE A 357 GLU A 366 1 ? 10 HELX_P HELX_P11 11 PRO A 271 ? LEU A 282 ? PRO A 386 LEU A 397 1 ? 12 HELX_P HELX_P12 12 ASP A 311 ? GLY A 324 ? ASP A 426 GLY A 439 1 ? 14 HELX_P HELX_P13 13 THR A 335 ? GLU A 349 ? THR A 450 GLU A 464 1 ? 15 HELX_P HELX_P14 14 SER A 361 ? SER A 374 ? SER A 476 SER A 489 1 ? 14 HELX_P HELX_P15 15 ALA A 384 ? ARG A 388 ? ALA A 499 ARG A 503 1 ? 5 HELX_P HELX_P16 16 ASP A 406 ? GLY A 415 ? ASP A 521 GLY A 530 1 ? 10 HELX_P HELX_P17 17 ASN A 431 ? ASN A 436 ? ASN A 546 ASN A 551 5 ? 6 HELX_P HELX_P18 18 ILE A 437 ? ALA A 448 ? ILE A 552 ALA A 563 1 ? 12 HELX_P HELX_P19 19 PRO A 453 ? MET A 459 ? PRO A 568 MET A 574 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 54 ? THR A 56 ? GLU A 169 THR A 171 A 2 ILE A 286 ? ALA A 289 ? ILE A 401 ALA A 404 A 3 LEU A 105 ? CYS A 108 ? LEU A 220 CYS A 223 A 4 HIS A 262 ? PHE A 266 ? HIS A 377 PHE A 381 A 5 TYR A 228 ? ASP A 232 ? TYR A 343 ASP A 347 A 6 SER A 154 ? LEU A 157 ? SER A 269 LEU A 272 A 7 LEU A 204 ? ALA A 207 ? LEU A 319 ALA A 322 A 8 PRO A 182 ? VAL A 184 ? PRO A 297 VAL A 299 B 1 ILE A 300 ? TRP A 306 ? ILE A 415 TRP A 421 B 2 GLY A 424 ? PHE A 430 ? GLY A 539 PHE A 545 B 3 HIS A 397 ? ASN A 400 ? HIS A 512 ASN A 515 B 4 THR A 329 ? VAL A 333 ? THR A 444 VAL A 448 B 5 ILE A 379 ? THR A 383 ? ILE A 494 THR A 498 B 6 CYS A 353 ? SER A 355 ? CYS A 468 SER A 470 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 54 ? N GLU A 169 O ALA A 289 ? O ALA A 404 A 2 3 O LEU A 288 ? O LEU A 403 N CYS A 108 ? N CYS A 223 A 3 4 N ALA A 107 ? N ALA A 222 O MET A 265 ? O MET A 380 A 4 5 O HIS A 262 ? O HIS A 377 N LEU A 229 ? N LEU A 344 A 5 6 O VAL A 230 ? O VAL A 345 N LEU A 157 ? N LEU A 272 A 6 7 N VAL A 156 ? N VAL A 271 O ALA A 207 ? O ALA A 322 A 7 8 O VAL A 206 ? O VAL A 321 N CYS A 183 ? N CYS A 298 B 1 2 N THR A 301 ? N THR A 416 O ALA A 426 ? O ALA A 541 B 2 3 O THR A 427 ? O THR A 542 N ASN A 400 ? N ASN A 515 B 3 4 O HIS A 397 ? O HIS A 512 N LEU A 330 ? N LEU A 445 B 4 5 N VAL A 331 ? N VAL A 446 O LEU A 380 ? O LEU A 495 B 5 6 O VAL A 381 ? O VAL A 496 N THR A 354 ? N THR A 469 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ADP 601 ? 12 'BINDING SITE FOR RESIDUE ADP A 601' AC2 Software A PO4 602 ? 7 'BINDING SITE FOR RESIDUE PO4 A 602' AC3 Software A PO4 603 ? 5 'BINDING SITE FOR RESIDUE PO4 A 603' AC4 Software A PO4 604 ? 4 'BINDING SITE FOR RESIDUE PO4 A 604' AC5 Software A PO4 605 ? 7 'BINDING SITE FOR RESIDUE PO4 A 605' AC6 Software A PO4 606 ? 4 'BINDING SITE FOR RESIDUE PO4 A 606' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 THR A 41 ? THR A 156 . ? 1_555 ? 2 AC1 12 ILE A 43 ? ILE A 158 . ? 1_555 ? 3 AC1 12 TYR A 85 ? TYR A 200 . ? 1_555 ? 4 AC1 12 ARG A 87 ? ARG A 202 . ? 1_555 ? 5 AC1 12 PRO A 88 ? PRO A 203 . ? 1_555 ? 6 AC1 12 THR A 89 ? THR A 204 . ? 1_555 ? 7 AC1 12 GLN A 92 ? GLN A 207 . ? 1_555 ? 8 AC1 12 THR A 111 ? THR A 226 . ? 1_555 ? 9 AC1 12 GLY A 112 ? GLY A 227 . ? 1_555 ? 10 AC1 12 GLY A 114 ? GLY A 229 . ? 1_555 ? 11 AC1 12 LYS A 115 ? LYS A 230 . ? 1_555 ? 12 AC1 12 THR A 116 ? THR A 231 . ? 1_555 ? 13 AC2 7 GLY A 187 ? GLY A 302 . ? 1_555 ? 14 AC2 7 THR A 208 ? THR A 323 . ? 1_555 ? 15 AC2 7 GLY A 210 ? GLY A 325 . ? 1_555 ? 16 AC2 7 ARG A 211 ? ARG A 326 . ? 1_555 ? 17 AC2 7 PHE A 242 ? PHE A 357 . ? 1_555 ? 18 AC2 7 GLN A 362 ? GLN A 477 . ? 1_555 ? 19 AC2 7 PO4 E . ? PO4 A 604 . ? 1_555 ? 20 AC3 5 LYS A 149 ? LYS A 264 . ? 6_545 ? 21 AC3 5 TYR A 151 ? TYR A 266 . ? 6_545 ? 22 AC3 5 ASP A 224 ? ASP A 339 . ? 6_545 ? 23 AC3 5 SER A 454 ? SER A 569 . ? 1_555 ? 24 AC3 5 TRP A 455 ? TRP A 570 . ? 1_555 ? 25 AC4 4 ARG A 211 ? ARG A 326 . ? 1_555 ? 26 AC4 4 ASP A 214 ? ASP A 329 . ? 1_555 ? 27 AC4 4 PO4 C . ? PO4 A 602 . ? 1_555 ? 28 AC4 4 PO4 F . ? PO4 A 605 . ? 1_555 ? 29 AC5 7 GLY A 187 ? GLY A 302 . ? 1_555 ? 30 AC5 7 GLY A 188 ? GLY A 303 . ? 1_555 ? 31 AC5 7 ARG A 211 ? ARG A 326 . ? 1_555 ? 32 AC5 7 SER A 361 ? SER A 476 . ? 1_555 ? 33 AC5 7 GLN A 362 ? GLN A 477 . ? 1_555 ? 34 AC5 7 ARG A 363 ? ARG A 478 . ? 1_555 ? 35 AC5 7 PO4 E . ? PO4 A 604 . ? 1_555 ? 36 AC6 4 LYS A 102 ? LYS A 217 . ? 1_555 ? 37 AC6 4 LYS A 227 ? LYS A 342 . ? 1_555 ? 38 AC6 4 HIS A 262 ? HIS A 377 . ? 1_555 ? 39 AC6 4 ASP A 311 ? ASP A 426 . ? 6_445 ? # _database_PDB_matrix.entry_id 4PXA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4PXA _atom_sites.fract_transf_matrix[1][1] 0.009456 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009456 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006552 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 116 ? ? ? A . n A 1 2 GLY 2 117 ? ? ? A . n A 1 3 SER 3 118 ? ? ? A . n A 1 4 SER 4 119 ? ? ? A . n A 1 5 HIS 5 120 ? ? ? A . n A 1 6 HIS 6 121 ? ? ? A . n A 1 7 HIS 7 122 ? ? ? A . n A 1 8 HIS 8 123 ? ? ? A . n A 1 9 HIS 9 124 ? ? ? A . n A 1 10 HIS 10 125 ? ? ? A . n A 1 11 SER 11 126 ? ? ? A . n A 1 12 SER 12 127 ? ? ? A . n A 1 13 GLY 13 128 ? ? ? A . n A 1 14 LEU 14 129 ? ? ? A . n A 1 15 VAL 15 130 ? ? ? A . n A 1 16 PRO 16 131 ? ? ? A . n A 1 17 ARG 17 132 ? ? ? A . n A 1 18 GLY 18 133 ? ? ? A . n A 1 19 SER 19 134 ? ? ? A . n A 1 20 ASP 20 135 135 ASP ASP A . n A 1 21 TRP 21 136 136 TRP TRP A . n A 1 22 SER 22 137 137 SER SER A . n A 1 23 LYS 23 138 138 LYS LYS A . n A 1 24 PRO 24 139 139 PRO PRO A . n A 1 25 LEU 25 140 140 LEU LEU A . n A 1 26 PRO 26 141 141 PRO PRO A . n A 1 27 PRO 27 142 142 PRO PRO A . n A 1 28 SER 28 143 143 SER SER A . n A 1 29 GLU 29 144 144 GLU GLU A . n A 1 30 ARG 30 145 145 ARG ARG A . n A 1 31 LEU 31 146 146 LEU LEU A . n A 1 32 GLU 32 147 147 GLU GLU A . n A 1 33 GLN 33 148 148 GLN GLN A . n A 1 34 GLU 34 149 149 GLU GLU A . n A 1 35 LEU 35 150 150 LEU LEU A . n A 1 36 PHE 36 151 151 PHE PHE A . n A 1 37 SER 37 152 152 SER SER A . n A 1 38 GLY 38 153 153 GLY GLY A . n A 1 39 GLY 39 154 154 GLY GLY A . n A 1 40 ASN 40 155 155 ASN ASN A . n A 1 41 THR 41 156 156 THR THR A . n A 1 42 GLY 42 157 157 GLY GLY A . n A 1 43 ILE 43 158 158 ILE ILE A . n A 1 44 ASN 44 159 159 ASN ASN A . n A 1 45 PHE 45 160 160 PHE PHE A . n A 1 46 GLU 46 161 161 GLU GLU A . n A 1 47 LYS 47 162 162 LYS LYS A . n A 1 48 TYR 48 163 163 TYR TYR A . n A 1 49 ASP 49 164 164 ASP ASP A . n A 1 50 ASP 50 165 165 ASP ASP A . n A 1 51 ILE 51 166 166 ILE ILE A . n A 1 52 PRO 52 167 167 PRO PRO A . n A 1 53 VAL 53 168 168 VAL VAL A . n A 1 54 GLU 54 169 169 GLU GLU A . n A 1 55 ALA 55 170 170 ALA ALA A . n A 1 56 THR 56 171 171 THR THR A . n A 1 57 GLY 57 172 172 GLY GLY A . n A 1 58 ASN 58 173 173 ASN ASN A . n A 1 59 ASN 59 174 174 ASN ASN A . n A 1 60 CYS 60 175 175 CYS CYS A . n A 1 61 PRO 61 176 176 PRO PRO A . n A 1 62 PRO 62 177 177 PRO PRO A . n A 1 63 HIS 63 178 178 HIS HIS A . n A 1 64 ILE 64 179 179 ILE ILE A . n A 1 65 GLU 65 180 180 GLU GLU A . n A 1 66 SER 66 181 181 SER SER A . n A 1 67 PHE 67 182 182 PHE PHE A . n A 1 68 SER 68 183 183 SER SER A . n A 1 69 ASP 69 184 184 ASP ASP A . n A 1 70 VAL 70 185 185 VAL VAL A . n A 1 71 GLU 71 186 186 GLU GLU A . n A 1 72 MET 72 187 187 MET MET A . n A 1 73 GLY 73 188 188 GLY GLY A . n A 1 74 GLU 74 189 189 GLU GLU A . n A 1 75 ILE 75 190 190 ILE ILE A . n A 1 76 ILE 76 191 191 ILE ILE A . n A 1 77 MET 77 192 192 MET MET A . n A 1 78 GLY 78 193 193 GLY GLY A . n A 1 79 ASN 79 194 194 ASN ASN A . n A 1 80 ILE 80 195 195 ILE ILE A . n A 1 81 GLU 81 196 196 GLU GLU A . n A 1 82 LEU 82 197 197 LEU LEU A . n A 1 83 THR 83 198 198 THR THR A . n A 1 84 ARG 84 199 199 ARG ARG A . n A 1 85 TYR 85 200 200 TYR TYR A . n A 1 86 THR 86 201 201 THR THR A . n A 1 87 ARG 87 202 202 ARG ARG A . n A 1 88 PRO 88 203 203 PRO PRO A . n A 1 89 THR 89 204 204 THR THR A . n A 1 90 PRO 90 205 205 PRO PRO A . n A 1 91 VAL 91 206 206 VAL VAL A . n A 1 92 GLN 92 207 207 GLN GLN A . n A 1 93 LYS 93 208 208 LYS LYS A . n A 1 94 HIS 94 209 209 HIS HIS A . n A 1 95 ALA 95 210 210 ALA ALA A . n A 1 96 ILE 96 211 211 ILE ILE A . n A 1 97 PRO 97 212 212 PRO PRO A . n A 1 98 ILE 98 213 213 ILE ILE A . n A 1 99 ILE 99 214 214 ILE ILE A . n A 1 100 LYS 100 215 215 LYS LYS A . n A 1 101 GLU 101 216 216 GLU GLU A . n A 1 102 LYS 102 217 217 LYS LYS A . n A 1 103 ARG 103 218 218 ARG ARG A . n A 1 104 ASP 104 219 219 ASP ASP A . n A 1 105 LEU 105 220 220 LEU LEU A . n A 1 106 MET 106 221 221 MET MET A . n A 1 107 ALA 107 222 222 ALA ALA A . n A 1 108 CYS 108 223 223 CYS CYS A . n A 1 109 ALA 109 224 224 ALA ALA A . n A 1 110 GLN 110 225 225 GLN GLN A . n A 1 111 THR 111 226 226 THR THR A . n A 1 112 GLY 112 227 227 GLY GLY A . n A 1 113 SER 113 228 228 SER SER A . n A 1 114 GLY 114 229 229 GLY GLY A . n A 1 115 LYS 115 230 230 LYS LYS A . n A 1 116 THR 116 231 231 THR THR A . n A 1 117 ALA 117 232 232 ALA ALA A . n A 1 118 ALA 118 233 233 ALA ALA A . n A 1 119 PHE 119 234 234 PHE PHE A . n A 1 120 LEU 120 235 235 LEU LEU A . n A 1 121 LEU 121 236 236 LEU LEU A . n A 1 122 PRO 122 237 237 PRO PRO A . n A 1 123 ILE 123 238 238 ILE ILE A . n A 1 124 LEU 124 239 239 LEU LEU A . n A 1 125 SER 125 240 240 SER SER A . n A 1 126 GLN 126 241 241 GLN GLN A . n A 1 127 ILE 127 242 242 ILE ILE A . n A 1 128 TYR 128 243 243 TYR TYR A . n A 1 129 SER 129 244 244 SER SER A . n A 1 130 ASP 130 245 245 ASP ASP A . n A 1 131 GLY 131 246 246 GLY GLY A . n A 1 132 PRO 132 247 247 PRO PRO A . n A 1 133 GLY 133 248 248 GLY GLY A . n A 1 134 GLU 134 249 249 GLU GLU A . n A 1 135 ALA 135 250 250 ALA ALA A . n A 1 136 LEU 136 251 251 LEU LEU A . n A 1 137 ARG 137 252 252 ARG ARG A . n A 1 138 ALA 138 253 253 ALA ALA A . n A 1 139 MET 139 254 254 MET MET A . n A 1 140 LYS 140 255 255 LYS LYS A . n A 1 141 GLU 141 256 256 GLU GLU A . n A 1 142 ASN 142 257 257 ASN ASN A . n A 1 143 GLY 143 258 258 GLY GLY A . n A 1 144 ARG 144 259 259 ARG ARG A . n A 1 145 TYR 145 260 260 TYR TYR A . n A 1 146 GLY 146 261 261 GLY GLY A . n A 1 147 ARG 147 262 262 ARG ARG A . n A 1 148 ARG 148 263 263 ARG ARG A . n A 1 149 LYS 149 264 264 LYS LYS A . n A 1 150 GLN 150 265 265 GLN GLN A . n A 1 151 TYR 151 266 266 TYR TYR A . n A 1 152 PRO 152 267 267 PRO PRO A . n A 1 153 ILE 153 268 268 ILE ILE A . n A 1 154 SER 154 269 269 SER SER A . n A 1 155 LEU 155 270 270 LEU LEU A . n A 1 156 VAL 156 271 271 VAL VAL A . n A 1 157 LEU 157 272 272 LEU LEU A . n A 1 158 ALA 158 273 273 ALA ALA A . n A 1 159 PRO 159 274 274 PRO PRO A . n A 1 160 THR 160 275 275 THR THR A . n A 1 161 ARG 161 276 276 ARG ARG A . n A 1 162 GLU 162 277 277 GLU GLU A . n A 1 163 LEU 163 278 278 LEU LEU A . n A 1 164 ALA 164 279 279 ALA ALA A . n A 1 165 VAL 165 280 280 VAL VAL A . n A 1 166 GLN 166 281 281 GLN GLN A . n A 1 167 ILE 167 282 282 ILE ILE A . n A 1 168 TYR 168 283 283 TYR TYR A . n A 1 169 GLU 169 284 284 GLU GLU A . n A 1 170 GLU 170 285 285 GLU GLU A . n A 1 171 ALA 171 286 286 ALA ALA A . n A 1 172 ARG 172 287 287 ARG ARG A . n A 1 173 LYS 173 288 288 LYS LYS A . n A 1 174 PHE 174 289 289 PHE PHE A . n A 1 175 SER 175 290 290 SER SER A . n A 1 176 TYR 176 291 291 TYR TYR A . n A 1 177 ARG 177 292 292 ARG ARG A . n A 1 178 SER 178 293 293 SER SER A . n A 1 179 ARG 179 294 294 ARG ARG A . n A 1 180 VAL 180 295 295 VAL VAL A . n A 1 181 ARG 181 296 296 ARG ARG A . n A 1 182 PRO 182 297 297 PRO PRO A . n A 1 183 CYS 183 298 298 CYS CYS A . n A 1 184 VAL 184 299 299 VAL VAL A . n A 1 185 VAL 185 300 300 VAL VAL A . n A 1 186 TYR 186 301 301 TYR TYR A . n A 1 187 GLY 187 302 302 GLY GLY A . n A 1 188 GLY 188 303 303 GLY GLY A . n A 1 189 ALA 189 304 304 ALA ALA A . n A 1 190 ASP 190 305 305 ASP ASP A . n A 1 191 ILE 191 306 306 ILE ILE A . n A 1 192 GLY 192 307 307 GLY GLY A . n A 1 193 GLN 193 308 308 GLN GLN A . n A 1 194 GLN 194 309 309 GLN GLN A . n A 1 195 ILE 195 310 310 ILE ILE A . n A 1 196 ARG 196 311 311 ARG ARG A . n A 1 197 ASP 197 312 312 ASP ASP A . n A 1 198 LEU 198 313 313 LEU LEU A . n A 1 199 GLU 199 314 314 GLU GLU A . n A 1 200 ARG 200 315 315 ARG ARG A . n A 1 201 GLY 201 316 316 GLY GLY A . n A 1 202 CYS 202 317 317 CYS CYS A . n A 1 203 HIS 203 318 318 HIS HIS A . n A 1 204 LEU 204 319 319 LEU LEU A . n A 1 205 LEU 205 320 320 LEU LEU A . n A 1 206 VAL 206 321 321 VAL VAL A . n A 1 207 ALA 207 322 322 ALA ALA A . n A 1 208 THR 208 323 323 THR THR A . n A 1 209 PRO 209 324 324 PRO PRO A . n A 1 210 GLY 210 325 325 GLY GLY A . n A 1 211 ARG 211 326 326 ARG ARG A . n A 1 212 LEU 212 327 327 LEU LEU A . n A 1 213 VAL 213 328 328 VAL VAL A . n A 1 214 ASP 214 329 329 ASP ASP A . n A 1 215 MET 215 330 330 MET MET A . n A 1 216 MET 216 331 331 MET MET A . n A 1 217 GLU 217 332 332 GLU GLU A . n A 1 218 ARG 218 333 333 ARG ARG A . n A 1 219 GLY 219 334 334 GLY GLY A . n A 1 220 LYS 220 335 335 LYS LYS A . n A 1 221 ILE 221 336 336 ILE ILE A . n A 1 222 GLY 222 337 337 GLY GLY A . n A 1 223 LEU 223 338 338 LEU LEU A . n A 1 224 ASP 224 339 339 ASP ASP A . n A 1 225 PHE 225 340 340 PHE PHE A . n A 1 226 CYS 226 341 341 CYS CYS A . n A 1 227 LYS 227 342 342 LYS LYS A . n A 1 228 TYR 228 343 343 TYR TYR A . n A 1 229 LEU 229 344 344 LEU LEU A . n A 1 230 VAL 230 345 345 VAL VAL A . n A 1 231 LEU 231 346 346 LEU LEU A . n A 1 232 ASP 232 347 347 ASP ASP A . n A 1 233 GLU 233 348 348 GLU GLU A . n A 1 234 ALA 234 349 349 ALA ALA A . n A 1 235 ASP 235 350 350 ASP ASP A . n A 1 236 ARG 236 351 351 ARG ARG A . n A 1 237 MET 237 352 352 MET MET A . n A 1 238 LEU 238 353 353 LEU LEU A . n A 1 239 VAL 239 354 354 VAL VAL A . n A 1 240 MET 240 355 355 MET MET A . n A 1 241 GLY 241 356 356 GLY GLY A . n A 1 242 PHE 242 357 357 PHE PHE A . n A 1 243 GLU 243 358 358 GLU GLU A . n A 1 244 PRO 244 359 359 PRO PRO A . n A 1 245 GLN 245 360 360 GLN GLN A . n A 1 246 ILE 246 361 361 ILE ILE A . n A 1 247 ARG 247 362 362 ARG ARG A . n A 1 248 ARG 248 363 363 ARG ARG A . n A 1 249 ILE 249 364 364 ILE ILE A . n A 1 250 VAL 250 365 365 VAL VAL A . n A 1 251 GLU 251 366 366 GLU GLU A . n A 1 252 GLN 252 367 367 GLN GLN A . n A 1 253 ASP 253 368 368 ASP ASP A . n A 1 254 THR 254 369 369 THR THR A . n A 1 255 MET 255 370 370 MET MET A . n A 1 256 PRO 256 371 371 PRO PRO A . n A 1 257 PRO 257 372 372 PRO PRO A . n A 1 258 LYS 258 373 373 LYS LYS A . n A 1 259 GLY 259 374 374 GLY GLY A . n A 1 260 VAL 260 375 375 VAL VAL A . n A 1 261 ARG 261 376 376 ARG ARG A . n A 1 262 HIS 262 377 377 HIS HIS A . n A 1 263 THR 263 378 378 THR THR A . n A 1 264 MET 264 379 379 MET MET A . n A 1 265 MET 265 380 380 MET MET A . n A 1 266 PHE 266 381 381 PHE PHE A . n A 1 267 SER 267 382 382 SER SER A . n A 1 268 ALA 268 383 383 ALA ALA A . n A 1 269 THR 269 384 384 THR THR A . n A 1 270 PHE 270 385 385 PHE PHE A . n A 1 271 PRO 271 386 386 PRO PRO A . n A 1 272 LYS 272 387 387 LYS LYS A . n A 1 273 GLU 273 388 388 GLU GLU A . n A 1 274 ILE 274 389 389 ILE ILE A . n A 1 275 GLN 275 390 390 GLN GLN A . n A 1 276 MET 276 391 391 MET MET A . n A 1 277 LEU 277 392 392 LEU LEU A . n A 1 278 ALA 278 393 393 ALA ALA A . n A 1 279 ARG 279 394 394 ARG ARG A . n A 1 280 ASP 280 395 395 ASP ASP A . n A 1 281 PHE 281 396 396 PHE PHE A . n A 1 282 LEU 282 397 397 LEU LEU A . n A 1 283 ASP 283 398 398 ASP ASP A . n A 1 284 GLU 284 399 399 GLU GLU A . n A 1 285 TYR 285 400 400 TYR TYR A . n A 1 286 ILE 286 401 401 ILE ILE A . n A 1 287 PHE 287 402 402 PHE PHE A . n A 1 288 LEU 288 403 403 LEU LEU A . n A 1 289 ALA 289 404 404 ALA ALA A . n A 1 290 VAL 290 405 405 VAL VAL A . n A 1 291 GLY 291 406 406 GLY GLY A . n A 1 292 ARG 292 407 407 ARG ARG A . n A 1 293 VAL 293 408 408 VAL VAL A . n A 1 294 GLY 294 409 409 GLY GLY A . n A 1 295 SER 295 410 410 SER SER A . n A 1 296 THR 296 411 411 THR THR A . n A 1 297 SER 297 412 412 SER SER A . n A 1 298 GLU 298 413 413 GLU GLU A . n A 1 299 ASN 299 414 414 ASN ASN A . n A 1 300 ILE 300 415 415 ILE ILE A . n A 1 301 THR 301 416 416 THR THR A . n A 1 302 GLN 302 417 417 GLN GLN A . n A 1 303 LYS 303 418 418 LYS LYS A . n A 1 304 VAL 304 419 419 VAL VAL A . n A 1 305 VAL 305 420 420 VAL VAL A . n A 1 306 TRP 306 421 421 TRP TRP A . n A 1 307 VAL 307 422 422 VAL VAL A . n A 1 308 GLU 308 423 423 GLU GLU A . n A 1 309 GLU 309 424 424 GLU GLU A . n A 1 310 SER 310 425 425 SER SER A . n A 1 311 ASP 311 426 426 ASP ASP A . n A 1 312 LYS 312 427 427 LYS LYS A . n A 1 313 ARG 313 428 428 ARG ARG A . n A 1 314 SER 314 429 429 SER SER A . n A 1 315 PHE 315 430 430 PHE PHE A . n A 1 316 LEU 316 431 431 LEU LEU A . n A 1 317 LEU 317 432 432 LEU LEU A . n A 1 318 ASP 318 433 433 ASP ASP A . n A 1 319 LEU 319 434 434 LEU LEU A . n A 1 320 LEU 320 435 435 LEU LEU A . n A 1 321 ASN 321 436 436 ASN ASN A . n A 1 322 ALA 322 437 437 ALA ALA A . n A 1 323 THR 323 438 438 THR THR A . n A 1 324 GLY 324 439 439 GLY GLY A . n A 1 325 LYS 325 440 440 LYS LYS A . n A 1 326 ASP 326 441 441 ASP ASP A . n A 1 327 SER 327 442 442 SER SER A . n A 1 328 LEU 328 443 443 LEU LEU A . n A 1 329 THR 329 444 444 THR THR A . n A 1 330 LEU 330 445 445 LEU LEU A . n A 1 331 VAL 331 446 446 VAL VAL A . n A 1 332 PHE 332 447 447 PHE PHE A . n A 1 333 VAL 333 448 448 VAL VAL A . n A 1 334 GLU 334 449 449 GLU GLU A . n A 1 335 THR 335 450 450 THR THR A . n A 1 336 LYS 336 451 451 LYS LYS A . n A 1 337 LYS 337 452 452 LYS LYS A . n A 1 338 GLY 338 453 453 GLY GLY A . n A 1 339 ALA 339 454 454 ALA ALA A . n A 1 340 ASP 340 455 455 ASP ASP A . n A 1 341 SER 341 456 456 SER SER A . n A 1 342 LEU 342 457 457 LEU LEU A . n A 1 343 GLU 343 458 458 GLU GLU A . n A 1 344 ASP 344 459 459 ASP ASP A . n A 1 345 PHE 345 460 460 PHE PHE A . n A 1 346 LEU 346 461 461 LEU LEU A . n A 1 347 TYR 347 462 462 TYR TYR A . n A 1 348 HIS 348 463 463 HIS HIS A . n A 1 349 GLU 349 464 464 GLU GLU A . n A 1 350 GLY 350 465 465 GLY GLY A . n A 1 351 TYR 351 466 466 TYR TYR A . n A 1 352 ALA 352 467 467 ALA ALA A . n A 1 353 CYS 353 468 468 CYS CYS A . n A 1 354 THR 354 469 469 THR THR A . n A 1 355 SER 355 470 470 SER SER A . n A 1 356 ILE 356 471 471 ILE ILE A . n A 1 357 HIS 357 472 472 HIS HIS A . n A 1 358 GLY 358 473 473 GLY GLY A . n A 1 359 ASP 359 474 474 ASP ASP A . n A 1 360 ARG 360 475 475 ARG ARG A . n A 1 361 SER 361 476 476 SER SER A . n A 1 362 GLN 362 477 477 GLN GLN A . n A 1 363 ARG 363 478 478 ARG ARG A . n A 1 364 ASP 364 479 479 ASP ASP A . n A 1 365 ARG 365 480 480 ARG ARG A . n A 1 366 GLU 366 481 481 GLU GLU A . n A 1 367 GLU 367 482 482 GLU GLU A . n A 1 368 ALA 368 483 483 ALA ALA A . n A 1 369 LEU 369 484 484 LEU LEU A . n A 1 370 HIS 370 485 485 HIS HIS A . n A 1 371 GLN 371 486 486 GLN GLN A . n A 1 372 PHE 372 487 487 PHE PHE A . n A 1 373 ARG 373 488 488 ARG ARG A . n A 1 374 SER 374 489 489 SER SER A . n A 1 375 GLY 375 490 490 GLY GLY A . n A 1 376 LYS 376 491 491 LYS LYS A . n A 1 377 SER 377 492 492 SER SER A . n A 1 378 PRO 378 493 493 PRO PRO A . n A 1 379 ILE 379 494 494 ILE ILE A . n A 1 380 LEU 380 495 495 LEU LEU A . n A 1 381 VAL 381 496 496 VAL VAL A . n A 1 382 ALA 382 497 497 ALA ALA A . n A 1 383 THR 383 498 498 THR THR A . n A 1 384 ALA 384 499 499 ALA ALA A . n A 1 385 VAL 385 500 500 VAL VAL A . n A 1 386 ALA 386 501 501 ALA ALA A . n A 1 387 ALA 387 502 502 ALA ALA A . n A 1 388 ARG 388 503 503 ARG ARG A . n A 1 389 GLY 389 504 504 GLY GLY A . n A 1 390 LEU 390 505 505 LEU LEU A . n A 1 391 ASP 391 506 506 ASP ASP A . n A 1 392 ILE 392 507 507 ILE ILE A . n A 1 393 SER 393 508 508 SER SER A . n A 1 394 ASN 394 509 509 ASN ASN A . n A 1 395 VAL 395 510 510 VAL VAL A . n A 1 396 LYS 396 511 511 LYS LYS A . n A 1 397 HIS 397 512 512 HIS HIS A . n A 1 398 VAL 398 513 513 VAL VAL A . n A 1 399 ILE 399 514 514 ILE ILE A . n A 1 400 ASN 400 515 515 ASN ASN A . n A 1 401 PHE 401 516 516 PHE PHE A . n A 1 402 ASP 402 517 517 ASP ASP A . n A 1 403 LEU 403 518 518 LEU LEU A . n A 1 404 PRO 404 519 519 PRO PRO A . n A 1 405 SER 405 520 520 SER SER A . n A 1 406 ASP 406 521 521 ASP ASP A . n A 1 407 ILE 407 522 522 ILE ILE A . n A 1 408 GLU 408 523 523 GLU GLU A . n A 1 409 GLU 409 524 524 GLU GLU A . n A 1 410 TYR 410 525 525 TYR TYR A . n A 1 411 VAL 411 526 526 VAL VAL A . n A 1 412 HIS 412 527 527 HIS HIS A . n A 1 413 ARG 413 528 528 ARG ARG A . n A 1 414 ILE 414 529 529 ILE ILE A . n A 1 415 GLY 415 530 530 GLY GLY A . n A 1 416 ARG 416 531 531 ARG ARG A . n A 1 417 THR 417 532 532 THR THR A . n A 1 418 GLY 418 533 533 GLY GLY A . n A 1 419 ARG 419 534 534 ARG ARG A . n A 1 420 VAL 420 535 535 VAL VAL A . n A 1 421 GLY 421 536 536 GLY GLY A . n A 1 422 ASN 422 537 537 ASN ASN A . n A 1 423 LEU 423 538 538 LEU LEU A . n A 1 424 GLY 424 539 539 GLY GLY A . n A 1 425 LEU 425 540 540 LEU LEU A . n A 1 426 ALA 426 541 541 ALA ALA A . n A 1 427 THR 427 542 542 THR THR A . n A 1 428 SER 428 543 543 SER SER A . n A 1 429 PHE 429 544 544 PHE PHE A . n A 1 430 PHE 430 545 545 PHE PHE A . n A 1 431 ASN 431 546 546 ASN ASN A . n A 1 432 GLU 432 547 547 GLU GLU A . n A 1 433 ARG 433 548 548 ARG ARG A . n A 1 434 ASN 434 549 549 ASN ASN A . n A 1 435 ILE 435 550 550 ILE ILE A . n A 1 436 ASN 436 551 551 ASN ASN A . n A 1 437 ILE 437 552 552 ILE ILE A . n A 1 438 THR 438 553 553 THR THR A . n A 1 439 LYS 439 554 554 LYS LYS A . n A 1 440 ASP 440 555 555 ASP ASP A . n A 1 441 LEU 441 556 556 LEU LEU A . n A 1 442 LEU 442 557 557 LEU LEU A . n A 1 443 ASP 443 558 558 ASP ASP A . n A 1 444 LEU 444 559 559 LEU LEU A . n A 1 445 LEU 445 560 560 LEU LEU A . n A 1 446 VAL 446 561 561 VAL VAL A . n A 1 447 GLU 447 562 562 GLU GLU A . n A 1 448 ALA 448 563 563 ALA ALA A . n A 1 449 LYS 449 564 564 LYS LYS A . n A 1 450 GLN 450 565 565 GLN GLN A . n A 1 451 GLU 451 566 566 GLU GLU A . n A 1 452 VAL 452 567 567 VAL VAL A . n A 1 453 PRO 453 568 568 PRO PRO A . n A 1 454 SER 454 569 569 SER SER A . n A 1 455 TRP 455 570 570 TRP TRP A . n A 1 456 LEU 456 571 571 LEU LEU A . n A 1 457 GLU 457 572 572 GLU GLU A . n A 1 458 ASN 458 573 573 ASN ASN A . n A 1 459 MET 459 574 574 MET MET A . n A 1 460 ALA 460 575 575 ALA ALA A . n A 1 461 TYR 461 576 576 TYR TYR A . n A 1 462 GLU 462 577 ? ? ? A . n A 1 463 HIS 463 578 ? ? ? A . n A 1 464 HIS 464 579 ? ? ? A . n A 1 465 TYR 465 580 ? ? ? A . n A 1 466 LYS 466 581 ? ? ? A . n A 1 467 GLY 467 582 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 601 601 ADP ADP A . C 3 PO4 1 602 1 PO4 PO4 A . D 3 PO4 1 603 2 PO4 PO4 A . E 3 PO4 1 604 3 PO4 PO4 A . F 3 PO4 1 605 4 PO4 PO4 A . G 3 PO4 1 606 5 PO4 PO4 A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-03-11 2 'Structure model' 1 1 2015-04-29 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SERGUI 'data collection' . ? 1 PHASER phasing . ? 2 CNS refinement 1.3 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 142 ? ? -60.62 -176.25 2 1 ASN A 155 ? ? 54.27 1.26 3 1 ASN A 159 ? ? -61.10 84.92 4 1 ASN A 174 ? ? 30.56 45.83 5 1 HIS A 178 ? ? -48.43 173.70 6 1 PHE A 182 ? ? -56.46 -7.93 7 1 GLU A 186 ? ? -63.15 99.91 8 1 LEU A 197 ? ? -48.65 -8.60 9 1 THR A 226 ? ? -41.63 155.75 10 1 ALA A 253 ? ? -78.30 40.05 11 1 MET A 254 ? ? -140.46 -18.87 12 1 ARG A 259 ? ? -81.00 47.62 13 1 ARG A 262 ? ? -141.71 59.01 14 1 ARG A 263 ? ? -73.70 -89.53 15 1 ARG A 292 ? ? 70.43 42.41 16 1 HIS A 318 ? ? -148.40 -29.42 17 1 PRO A 324 ? ? -26.25 -64.72 18 1 MET A 355 ? ? -68.47 25.66 19 1 VAL A 365 ? ? -65.61 -74.35 20 1 ASP A 368 ? ? -129.72 -168.99 21 1 THR A 369 ? ? -63.92 1.66 22 1 VAL A 405 ? ? -113.30 62.77 23 1 LYS A 440 ? ? 35.51 -1.88 24 1 ARG A 475 ? ? -43.85 153.31 25 1 SER A 489 ? ? -77.06 28.22 26 1 LYS A 491 ? ? -14.75 -47.22 27 1 VAL A 500 ? ? -48.81 -70.55 28 1 ALA A 501 ? ? -32.12 -34.72 29 1 ARG A 503 ? ? -51.17 103.43 30 1 ASN A 509 ? ? 83.65 37.86 31 1 ARG A 531 ? ? -49.78 -10.39 32 1 VAL A 535 ? ? -23.57 136.00 33 1 ALA A 563 ? ? -68.07 1.70 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 259 ? CG ? A ARG 144 CG 2 1 Y 1 A ARG 259 ? CD ? A ARG 144 CD 3 1 Y 1 A ARG 259 ? NE ? A ARG 144 NE 4 1 Y 1 A ARG 259 ? CZ ? A ARG 144 CZ 5 1 Y 1 A ARG 259 ? NH1 ? A ARG 144 NH1 6 1 Y 1 A ARG 259 ? NH2 ? A ARG 144 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 116 ? A MET 1 2 1 Y 1 A GLY 117 ? A GLY 2 3 1 Y 1 A SER 118 ? A SER 3 4 1 Y 1 A SER 119 ? A SER 4 5 1 Y 1 A HIS 120 ? A HIS 5 6 1 Y 1 A HIS 121 ? A HIS 6 7 1 Y 1 A HIS 122 ? A HIS 7 8 1 Y 1 A HIS 123 ? A HIS 8 9 1 Y 1 A HIS 124 ? A HIS 9 10 1 Y 1 A HIS 125 ? A HIS 10 11 1 Y 1 A SER 126 ? A SER 11 12 1 Y 1 A SER 127 ? A SER 12 13 1 Y 1 A GLY 128 ? A GLY 13 14 1 Y 1 A LEU 129 ? A LEU 14 15 1 Y 1 A VAL 130 ? A VAL 15 16 1 Y 1 A PRO 131 ? A PRO 16 17 1 Y 1 A ARG 132 ? A ARG 17 18 1 Y 1 A GLY 133 ? A GLY 18 19 1 Y 1 A SER 134 ? A SER 19 20 1 Y 1 A GLU 577 ? A GLU 462 21 1 Y 1 A HIS 578 ? A HIS 463 22 1 Y 1 A HIS 579 ? A HIS 464 23 1 Y 1 A TYR 580 ? A TYR 465 24 1 Y 1 A LYS 581 ? A LYS 466 25 1 Y 1 A GLY 582 ? A GLY 467 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CYS N N N N 116 CYS CA C N R 117 CYS C C N N 118 CYS O O N N 119 CYS CB C N N 120 CYS SG S N N 121 CYS OXT O N N 122 CYS H H N N 123 CYS H2 H N N 124 CYS HA H N N 125 CYS HB2 H N N 126 CYS HB3 H N N 127 CYS HG H N N 128 CYS HXT H N N 129 GLN N N N N 130 GLN CA C N S 131 GLN C C N N 132 GLN O O N N 133 GLN CB C N N 134 GLN CG C N N 135 GLN CD C N N 136 GLN OE1 O N N 137 GLN NE2 N N N 138 GLN OXT O N N 139 GLN H H N N 140 GLN H2 H N N 141 GLN HA H N N 142 GLN HB2 H N N 143 GLN HB3 H N N 144 GLN HG2 H N N 145 GLN HG3 H N N 146 GLN HE21 H N N 147 GLN HE22 H N N 148 GLN HXT H N N 149 GLU N N N N 150 GLU CA C N S 151 GLU C C N N 152 GLU O O N N 153 GLU CB C N N 154 GLU CG C N N 155 GLU CD C N N 156 GLU OE1 O N N 157 GLU OE2 O N N 158 GLU OXT O N N 159 GLU H H N N 160 GLU H2 H N N 161 GLU HA H N N 162 GLU HB2 H N N 163 GLU HB3 H N N 164 GLU HG2 H N N 165 GLU HG3 H N N 166 GLU HE2 H N N 167 GLU HXT H N N 168 GLY N N N N 169 GLY CA C N N 170 GLY C C N N 171 GLY O O N N 172 GLY OXT O N N 173 GLY H H N N 174 GLY H2 H N N 175 GLY HA2 H N N 176 GLY HA3 H N N 177 GLY HXT H N N 178 HIS N N N N 179 HIS CA C N S 180 HIS C C N N 181 HIS O O N N 182 HIS CB C N N 183 HIS CG C Y N 184 HIS ND1 N Y N 185 HIS CD2 C Y N 186 HIS CE1 C Y N 187 HIS NE2 N Y N 188 HIS OXT O N N 189 HIS H H N N 190 HIS H2 H N N 191 HIS HA H N N 192 HIS HB2 H N N 193 HIS HB3 H N N 194 HIS HD1 H N N 195 HIS HD2 H N N 196 HIS HE1 H N N 197 HIS HE2 H N N 198 HIS HXT H N N 199 ILE N N N N 200 ILE CA C N S 201 ILE C C N N 202 ILE O O N N 203 ILE CB C N S 204 ILE CG1 C N N 205 ILE CG2 C N N 206 ILE CD1 C N N 207 ILE OXT O N N 208 ILE H H N N 209 ILE H2 H N N 210 ILE HA H N N 211 ILE HB H N N 212 ILE HG12 H N N 213 ILE HG13 H N N 214 ILE HG21 H N N 215 ILE HG22 H N N 216 ILE HG23 H N N 217 ILE HD11 H N N 218 ILE HD12 H N N 219 ILE HD13 H N N 220 ILE HXT H N N 221 LEU N N N N 222 LEU CA C N S 223 LEU C C N N 224 LEU O O N N 225 LEU CB C N N 226 LEU CG C N N 227 LEU CD1 C N N 228 LEU CD2 C N N 229 LEU OXT O N N 230 LEU H H N N 231 LEU H2 H N N 232 LEU HA H N N 233 LEU HB2 H N N 234 LEU HB3 H N N 235 LEU HG H N N 236 LEU HD11 H N N 237 LEU HD12 H N N 238 LEU HD13 H N N 239 LEU HD21 H N N 240 LEU HD22 H N N 241 LEU HD23 H N N 242 LEU HXT H N N 243 LYS N N N N 244 LYS CA C N S 245 LYS C C N N 246 LYS O O N N 247 LYS CB C N N 248 LYS CG C N N 249 LYS CD C N N 250 LYS CE C N N 251 LYS NZ N N N 252 LYS OXT O N N 253 LYS H H N N 254 LYS H2 H N N 255 LYS HA H N N 256 LYS HB2 H N N 257 LYS HB3 H N N 258 LYS HG2 H N N 259 LYS HG3 H N N 260 LYS HD2 H N N 261 LYS HD3 H N N 262 LYS HE2 H N N 263 LYS HE3 H N N 264 LYS HZ1 H N N 265 LYS HZ2 H N N 266 LYS HZ3 H N N 267 LYS HXT H N N 268 MET N N N N 269 MET CA C N S 270 MET C C N N 271 MET O O N N 272 MET CB C N N 273 MET CG C N N 274 MET SD S N N 275 MET CE C N N 276 MET OXT O N N 277 MET H H N N 278 MET H2 H N N 279 MET HA H N N 280 MET HB2 H N N 281 MET HB3 H N N 282 MET HG2 H N N 283 MET HG3 H N N 284 MET HE1 H N N 285 MET HE2 H N N 286 MET HE3 H N N 287 MET HXT H N N 288 PHE N N N N 289 PHE CA C N S 290 PHE C C N N 291 PHE O O N N 292 PHE CB C N N 293 PHE CG C Y N 294 PHE CD1 C Y N 295 PHE CD2 C Y N 296 PHE CE1 C Y N 297 PHE CE2 C Y N 298 PHE CZ C Y N 299 PHE OXT O N N 300 PHE H H N N 301 PHE H2 H N N 302 PHE HA H N N 303 PHE HB2 H N N 304 PHE HB3 H N N 305 PHE HD1 H N N 306 PHE HD2 H N N 307 PHE HE1 H N N 308 PHE HE2 H N N 309 PHE HZ H N N 310 PHE HXT H N N 311 PO4 P P N N 312 PO4 O1 O N N 313 PO4 O2 O N N 314 PO4 O3 O N N 315 PO4 O4 O N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIS N CA sing N N 173 HIS N H sing N N 174 HIS N H2 sing N N 175 HIS CA C sing N N 176 HIS CA CB sing N N 177 HIS CA HA sing N N 178 HIS C O doub N N 179 HIS C OXT sing N N 180 HIS CB CG sing N N 181 HIS CB HB2 sing N N 182 HIS CB HB3 sing N N 183 HIS CG ND1 sing Y N 184 HIS CG CD2 doub Y N 185 HIS ND1 CE1 doub Y N 186 HIS ND1 HD1 sing N N 187 HIS CD2 NE2 sing Y N 188 HIS CD2 HD2 sing N N 189 HIS CE1 NE2 sing Y N 190 HIS CE1 HE1 sing N N 191 HIS NE2 HE2 sing N N 192 HIS OXT HXT sing N N 193 ILE N CA sing N N 194 ILE N H sing N N 195 ILE N H2 sing N N 196 ILE CA C sing N N 197 ILE CA CB sing N N 198 ILE CA HA sing N N 199 ILE C O doub N N 200 ILE C OXT sing N N 201 ILE CB CG1 sing N N 202 ILE CB CG2 sing N N 203 ILE CB HB sing N N 204 ILE CG1 CD1 sing N N 205 ILE CG1 HG12 sing N N 206 ILE CG1 HG13 sing N N 207 ILE CG2 HG21 sing N N 208 ILE CG2 HG22 sing N N 209 ILE CG2 HG23 sing N N 210 ILE CD1 HD11 sing N N 211 ILE CD1 HD12 sing N N 212 ILE CD1 HD13 sing N N 213 ILE OXT HXT sing N N 214 LEU N CA sing N N 215 LEU N H sing N N 216 LEU N H2 sing N N 217 LEU CA C sing N N 218 LEU CA CB sing N N 219 LEU CA HA sing N N 220 LEU C O doub N N 221 LEU C OXT sing N N 222 LEU CB CG sing N N 223 LEU CB HB2 sing N N 224 LEU CB HB3 sing N N 225 LEU CG CD1 sing N N 226 LEU CG CD2 sing N N 227 LEU CG HG sing N N 228 LEU CD1 HD11 sing N N 229 LEU CD1 HD12 sing N N 230 LEU CD1 HD13 sing N N 231 LEU CD2 HD21 sing N N 232 LEU CD2 HD22 sing N N 233 LEU CD2 HD23 sing N N 234 LEU OXT HXT sing N N 235 LYS N CA sing N N 236 LYS N H sing N N 237 LYS N H2 sing N N 238 LYS CA C sing N N 239 LYS CA CB sing N N 240 LYS CA HA sing N N 241 LYS C O doub N N 242 LYS C OXT sing N N 243 LYS CB CG sing N N 244 LYS CB HB2 sing N N 245 LYS CB HB3 sing N N 246 LYS CG CD sing N N 247 LYS CG HG2 sing N N 248 LYS CG HG3 sing N N 249 LYS CD CE sing N N 250 LYS CD HD2 sing N N 251 LYS CD HD3 sing N N 252 LYS CE NZ sing N N 253 LYS CE HE2 sing N N 254 LYS CE HE3 sing N N 255 LYS NZ HZ1 sing N N 256 LYS NZ HZ2 sing N N 257 LYS NZ HZ3 sing N N 258 LYS OXT HXT sing N N 259 MET N CA sing N N 260 MET N H sing N N 261 MET N H2 sing N N 262 MET CA C sing N N 263 MET CA CB sing N N 264 MET CA HA sing N N 265 MET C O doub N N 266 MET C OXT sing N N 267 MET CB CG sing N N 268 MET CB HB2 sing N N 269 MET CB HB3 sing N N 270 MET CG SD sing N N 271 MET CG HG2 sing N N 272 MET CG HG3 sing N N 273 MET SD CE sing N N 274 MET CE HE1 sing N N 275 MET CE HE2 sing N N 276 MET CE HE3 sing N N 277 MET OXT HXT sing N N 278 PHE N CA sing N N 279 PHE N H sing N N 280 PHE N H2 sing N N 281 PHE CA C sing N N 282 PHE CA CB sing N N 283 PHE CA HA sing N N 284 PHE C O doub N N 285 PHE C OXT sing N N 286 PHE CB CG sing N N 287 PHE CB HB2 sing N N 288 PHE CB HB3 sing N N 289 PHE CG CD1 doub Y N 290 PHE CG CD2 sing Y N 291 PHE CD1 CE1 sing Y N 292 PHE CD1 HD1 sing N N 293 PHE CD2 CE2 doub Y N 294 PHE CD2 HD2 sing N N 295 PHE CE1 CZ doub Y N 296 PHE CE1 HE1 sing N N 297 PHE CE2 CZ sing Y N 298 PHE CE2 HE2 sing N N 299 PHE CZ HZ sing N N 300 PHE OXT HXT sing N N 301 PO4 P O1 doub N N 302 PO4 P O2 sing N N 303 PO4 P O3 sing N N 304 PO4 P O4 sing N N 305 PRO N CA sing N N 306 PRO N CD sing N N 307 PRO N H sing N N 308 PRO CA C sing N N 309 PRO CA CB sing N N 310 PRO CA HA sing N N 311 PRO C O doub N N 312 PRO C OXT sing N N 313 PRO CB CG sing N N 314 PRO CB HB2 sing N N 315 PRO CB HB3 sing N N 316 PRO CG CD sing N N 317 PRO CG HG2 sing N N 318 PRO CG HG3 sing N N 319 PRO CD HD2 sing N N 320 PRO CD HD3 sing N N 321 PRO OXT HXT sing N N 322 SER N CA sing N N 323 SER N H sing N N 324 SER N H2 sing N N 325 SER CA C sing N N 326 SER CA CB sing N N 327 SER CA HA sing N N 328 SER C O doub N N 329 SER C OXT sing N N 330 SER CB OG sing N N 331 SER CB HB2 sing N N 332 SER CB HB3 sing N N 333 SER OG HG sing N N 334 SER OXT HXT sing N N 335 THR N CA sing N N 336 THR N H sing N N 337 THR N H2 sing N N 338 THR CA C sing N N 339 THR CA CB sing N N 340 THR CA HA sing N N 341 THR C O doub N N 342 THR C OXT sing N N 343 THR CB OG1 sing N N 344 THR CB CG2 sing N N 345 THR CB HB sing N N 346 THR OG1 HG1 sing N N 347 THR CG2 HG21 sing N N 348 THR CG2 HG22 sing N N 349 THR CG2 HG23 sing N N 350 THR OXT HXT sing N N 351 TRP N CA sing N N 352 TRP N H sing N N 353 TRP N H2 sing N N 354 TRP CA C sing N N 355 TRP CA CB sing N N 356 TRP CA HA sing N N 357 TRP C O doub N N 358 TRP C OXT sing N N 359 TRP CB CG sing N N 360 TRP CB HB2 sing N N 361 TRP CB HB3 sing N N 362 TRP CG CD1 doub Y N 363 TRP CG CD2 sing Y N 364 TRP CD1 NE1 sing Y N 365 TRP CD1 HD1 sing N N 366 TRP CD2 CE2 doub Y N 367 TRP CD2 CE3 sing Y N 368 TRP NE1 CE2 sing Y N 369 TRP NE1 HE1 sing N N 370 TRP CE2 CZ2 sing Y N 371 TRP CE3 CZ3 doub Y N 372 TRP CE3 HE3 sing N N 373 TRP CZ2 CH2 doub Y N 374 TRP CZ2 HZ2 sing N N 375 TRP CZ3 CH2 sing Y N 376 TRP CZ3 HZ3 sing N N 377 TRP CH2 HH2 sing N N 378 TRP OXT HXT sing N N 379 TYR N CA sing N N 380 TYR N H sing N N 381 TYR N H2 sing N N 382 TYR CA C sing N N 383 TYR CA CB sing N N 384 TYR CA HA sing N N 385 TYR C O doub N N 386 TYR C OXT sing N N 387 TYR CB CG sing N N 388 TYR CB HB2 sing N N 389 TYR CB HB3 sing N N 390 TYR CG CD1 doub Y N 391 TYR CG CD2 sing Y N 392 TYR CD1 CE1 sing Y N 393 TYR CD1 HD1 sing N N 394 TYR CD2 CE2 doub Y N 395 TYR CD2 HD2 sing N N 396 TYR CE1 CZ doub Y N 397 TYR CE1 HE1 sing N N 398 TYR CE2 CZ sing Y N 399 TYR CE2 HE2 sing N N 400 TYR CZ OH sing N N 401 TYR OH HH sing N N 402 TYR OXT HXT sing N N 403 VAL N CA sing N N 404 VAL N H sing N N 405 VAL N H2 sing N N 406 VAL CA C sing N N 407 VAL CA CB sing N N 408 VAL CA HA sing N N 409 VAL C O doub N N 410 VAL C OXT sing N N 411 VAL CB CG1 sing N N 412 VAL CB CG2 sing N N 413 VAL CB HB sing N N 414 VAL CG1 HG11 sing N N 415 VAL CG1 HG12 sing N N 416 VAL CG1 HG13 sing N N 417 VAL CG2 HG21 sing N N 418 VAL CG2 HG22 sing N N 419 VAL CG2 HG23 sing N N 420 VAL OXT HXT sing N N 421 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 'PHOSPHATE ION' PO4 # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 4PX9 'PDB ENTRIES 4PX9 AND 2JGN' 2 ? 'experimental model' PDB 2JGN 'PDB ENTRIES 4PX9 AND 2JGN' #