HEADER DNA BINDING PROTEIN 14-APR-14 4Q48 TITLE STRUCTURE OF THE RECQ CATALYTIC CORE FROM DEINOCOCCUS RADIODURANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA HELICASE RECQ; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-517; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 243230; SOURCE 4 STRAIN: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / SOURCE 5 NCIMB 9279 / R1 / VKM B-1422; SOURCE 6 GENE: DR_1289; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA UNWINDING, HELICASE, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.C.CHEN,C.S.YANG,Y.CHEN REVDAT 2 08-NOV-23 4Q48 1 REMARK SEQADV LINK REVDAT 1 20-MAY-15 4Q48 0 JRNL AUTH S.C.CHEN,C.H.HUANG,C.S.YANG,T.D.WAY,M.C.CHANG,Y.CHEN JRNL TITL CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS RECQ HELICASE JRNL TITL 2 CATALYTIC CORE DOMAIN: THE INTERDOMAIN FLEXIBILITY. JRNL REF BIOMED RES INT V.2014 42725 2014 JRNL REFN ISSN 2314-6133 JRNL PMID 25243132 JRNL DOI 10.1155/2014/342725 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 31478 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.350 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.3133 - 6.7091 0.94 2204 149 0.1725 0.2566 REMARK 3 2 6.7091 - 5.3382 0.96 2147 146 0.2251 0.2846 REMARK 3 3 5.3382 - 4.6672 0.96 2118 144 0.1955 0.2518 REMARK 3 4 4.6672 - 4.2422 0.97 2127 145 0.1741 0.2261 REMARK 3 5 4.2422 - 3.9391 0.97 2108 142 0.2034 0.2866 REMARK 3 6 3.9391 - 3.7075 0.97 2119 144 0.2184 0.2981 REMARK 3 7 3.7075 - 3.5222 0.98 2114 144 0.2180 0.2873 REMARK 3 8 3.5222 - 3.3692 0.97 2110 142 0.2375 0.3131 REMARK 3 9 3.3692 - 3.2397 0.96 2083 142 0.2514 0.2984 REMARK 3 10 3.2397 - 3.1280 0.96 2085 142 0.2476 0.3068 REMARK 3 11 3.1280 - 3.0304 0.96 2073 141 0.2502 0.3221 REMARK 3 12 3.0304 - 2.9438 0.96 2074 140 0.2579 0.3918 REMARK 3 13 2.9438 - 2.8664 0.97 2073 141 0.2832 0.3767 REMARK 3 14 2.8664 - 2.7966 0.94 2043 138 0.2993 0.3951 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 8019 REMARK 3 ANGLE : 1.577 10838 REMARK 3 CHIRALITY : 0.064 1220 REMARK 3 PLANARITY : 0.007 1425 REMARK 3 DIHEDRAL : 15.375 2998 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Q48 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085583. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31511 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.797 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.54300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OYW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES (PH 7.7), 14% PEG 8K, 8% REMARK 280 ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.89550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.44000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.26400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.44000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.89550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.26400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 PRO A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 PHE A 296 REMARK 465 GLY A 297 REMARK 465 MET A 298 REMARK 465 GLY A 299 REMARK 465 ILE A 300 REMARK 465 THR A 513 REMARK 465 LEU A 514 REMARK 465 LEU A 515 REMARK 465 PRO A 516 REMARK 465 GLY A 517 REMARK 465 LEU A 518 REMARK 465 GLU A 519 REMARK 465 HIS A 520 REMARK 465 HIS A 521 REMARK 465 HIS A 522 REMARK 465 HIS A 523 REMARK 465 HIS A 524 REMARK 465 HIS A 525 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 PRO B 5 REMARK 465 ALA B 6 REMARK 465 ALA B 7 REMARK 465 PHE B 296 REMARK 465 GLY B 297 REMARK 465 MET B 298 REMARK 465 GLY B 299 REMARK 465 ILE B 300 REMARK 465 LEU B 514 REMARK 465 LEU B 515 REMARK 465 PRO B 516 REMARK 465 GLY B 517 REMARK 465 LEU B 518 REMARK 465 GLU B 519 REMARK 465 HIS B 520 REMARK 465 HIS B 521 REMARK 465 HIS B 522 REMARK 465 HIS B 523 REMARK 465 HIS B 524 REMARK 465 HIS B 525 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 183 NH1 ARG A 188 2.04 REMARK 500 OG SER B 96 OE2 GLU B 123 2.15 REMARK 500 OG SER A 96 OE2 GLU A 123 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ARG A 112 NH1 ARG A 430 4445 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 270 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 LEU A 342 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 LEU B 15 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 LEU B 16 CA - CB - CG ANGL. DEV. = 26.4 DEGREES REMARK 500 LEU B 16 CB - CG - CD1 ANGL. DEV. = 11.8 DEGREES REMARK 500 PRO B 210 C - N - CA ANGL. DEV. = 10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 19 -52.17 -127.86 REMARK 500 HIS A 155 -132.77 177.23 REMARK 500 LEU A 164 3.61 -63.50 REMARK 500 ARG A 196 66.39 35.16 REMARK 500 ASP A 220 90.93 -161.32 REMARK 500 SER A 221 71.41 59.30 REMARK 500 SER A 271 134.59 7.38 REMARK 500 VAL A 294 117.62 -165.43 REMARK 500 LYS A 302 135.96 172.31 REMARK 500 LEU A 342 -100.32 31.60 REMARK 500 CYS A 381 119.21 -16.86 REMARK 500 ARG A 430 -18.22 -149.73 REMARK 500 ALA A 485 -64.05 -94.86 REMARK 500 ASP A 486 20.41 -53.02 REMARK 500 ASP B 10 24.52 -147.40 REMARK 500 LEU B 13 65.64 -171.52 REMARK 500 ILE B 19 -53.30 -127.69 REMARK 500 PRO B 23 -77.77 -38.89 REMARK 500 THR B 48 12.69 138.32 REMARK 500 LYS B 52 -36.93 175.16 REMARK 500 HIS B 155 -115.36 13.55 REMARK 500 LEU B 164 6.23 -66.51 REMARK 500 ARG B 196 69.60 34.54 REMARK 500 ASP B 220 91.81 -162.96 REMARK 500 HIS B 234 44.23 -141.61 REMARK 500 THR B 273 -94.61 -42.17 REMARK 500 LYS B 302 135.58 175.80 REMARK 500 CYS B 381 116.70 -16.60 REMARK 500 ARG B 430 -15.64 -149.33 REMARK 500 ASP B 486 115.19 38.64 REMARK 500 ASP B 487 -92.16 -6.37 REMARK 500 HIS B 488 59.26 -156.20 REMARK 500 ASP B 512 39.34 -49.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 341 LEU A 342 125.76 REMARK 500 ALA A 485 ASP A 486 -148.71 REMARK 500 ASP A 486 ASP A 487 132.67 REMARK 500 ASP B 10 ARG B 11 132.79 REMARK 500 LEU B 13 HIS B 14 140.23 REMARK 500 GLN B 34 GLN B 35 144.19 REMARK 500 ASP B 486 ASP B 487 35.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 381 SG REMARK 620 2 CYS A 398 SG 100.2 REMARK 620 3 CYS A 401 SG 116.6 112.8 REMARK 620 4 CYS A 404 SG 102.5 117.5 107.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 381 SG REMARK 620 2 CYS B 398 SG 99.8 REMARK 620 3 CYS B 401 SG 117.0 113.2 REMARK 620 4 CYS B 404 SG 101.6 118.1 106.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1OYW RELATED DB: PDB REMARK 900 ECRECQ REMARK 900 RELATED ID: 2V1X RELATED DB: PDB REMARK 900 HRECQ1 REMARK 900 RELATED ID: 4Q47 RELATED DB: PDB DBREF 4Q48 A 1 517 UNP Q9RUU2 Q9RUU2_DEIRA 1 517 DBREF 4Q48 B 1 517 UNP Q9RUU2 Q9RUU2_DEIRA 1 517 SEQADV 4Q48 LEU A 518 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 GLU A 519 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS A 520 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS A 521 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS A 522 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS A 523 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS A 524 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS A 525 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 LEU B 518 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 GLU B 519 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS B 520 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS B 521 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS B 522 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS B 523 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS B 524 UNP Q9RUU2 EXPRESSION TAG SEQADV 4Q48 HIS B 525 UNP Q9RUU2 EXPRESSION TAG SEQRES 1 A 525 MET THR ALA ALA PRO ALA ALA LEU HIS ASP ARG ALA LEU SEQRES 2 A 525 HIS LEU LEU GLN THR ILE TRP GLY TYR PRO ALA PHE ARG SEQRES 3 A 525 GLY VAL GLN GLY GLU ILE VAL GLN GLN VAL ALA GLU GLY SEQRES 4 A 525 GLY ASN ALA LEU VAL LEU MET PRO THR GLY GLY GLY LYS SEQRES 5 A 525 SER LEU CYS TYR GLN LEU PRO SER LEU LEU ARG PRO GLY SEQRES 6 A 525 THR GLY ILE VAL VAL SER PRO LEU ILE ALA LEU MET LYS SEQRES 7 A 525 ASP GLN VAL ASP THR LEU ARG GLN ASN GLY VAL ARG ALA SEQRES 8 A 525 ALA PHE LEU ASN SER THR LEU LEU PRO HIS GLU ALA ARG SEQRES 9 A 525 GLU VAL GLU ASP ALA LEU LEU ARG GLY ASP LEU ASP LEU SEQRES 10 A 525 LEU TYR VAL ALA PRO GLU ARG LEU LEU MET PRO ARG THR SEQRES 11 A 525 LEU ASP LEU LEU GLU ARG ALA PRO VAL ALA LEU PHE ALA SEQRES 12 A 525 ILE ASP GLU ALA HIS CYS VAL SER GLN TRP GLY HIS ASP SEQRES 13 A 525 PHE ARG PRO GLU TYR GLN GLN LEU SER VAL LEU ALA GLU SEQRES 14 A 525 ARG PHE PRO GLU LEU PRO ARG VAL ALA LEU THR ALA THR SEQRES 15 A 525 ALA ASP GLU ARG THR ARG ALA ASP ILE LYS SER VAL LEU SEQRES 16 A 525 ARG LEU GLU ASP ALA PRO GLN PHE VAL SER SER PHE ASP SEQRES 17 A 525 ARG PRO ASN ILE GLN TYR ARG VAL GLY LEU LYS ASP SER SEQRES 18 A 525 PRO LYS THR GLN LEU LEU HIS PHE ILE ARG GLU GLU HIS SEQRES 19 A 525 PRO GLY ASP ALA GLY ILE VAL TYR CYS LEU SER ARG LYS SEQRES 20 A 525 SER VAL GLU GLU THR ALA LYS TRP LEU GLN ALA GLN GLY SEQRES 21 A 525 ILE ASP ALA LEU ALA TYR HIS ALA GLY LEU SER SER THR SEQRES 22 A 525 GLU ARG ASN ASN VAL GLN GLU ARG PHE LEU ASN GLU GLU SEQRES 23 A 525 GLY VAL ILE VAL CYS ALA THR VAL ALA PHE GLY MET GLY SEQRES 24 A 525 ILE ASP LYS PRO ASN VAL ARG PHE VAL ALA HIS LEU ASP SEQRES 25 A 525 LEU PRO LYS SER MET GLU GLY TYR TYR GLN GLU THR GLY SEQRES 26 A 525 ARG ALA GLY ARG ASP GLY LEU PRO SER THR ALA TRP MET SEQRES 27 A 525 VAL TYR GLY LEU SER ASP VAL VAL ASN VAL ARG ARG MET SEQRES 28 A 525 LEU ALA GLN SER ASP ALA PRO GLU GLU VAL LYS ARG VAL SEQRES 29 A 525 GLU ALA SER LYS LEU ASP ALA LEU LEU THR TYR CYS GLU SEQRES 30 A 525 ALA ALA THR CYS ARG ARG GLN VAL LEU LEU HIS TYR PHE SEQRES 31 A 525 GLY GLU GLU LEU SER GLU PRO CYS GLY ASN CYS ASP VAL SEQRES 32 A 525 CYS LEU ASN PRO PRO ARG VAL ARG ASP LEU THR ARG GLU SEQRES 33 A 525 ALA GLN MET ALA LEU SER ALA THR ILE ARG THR GLY ASN SEQRES 34 A 525 ARG PHE GLY ALA ALA HIS LEU THR ASP VAL LEU LEU GLY SEQRES 35 A 525 ARG GLU THR ASP LYS VAL LEU ALA GLN GLY HIS HIS GLN SEQRES 36 A 525 LEU PRO THR PHE GLY VAL GLY LYS GLU HIS ASP GLU LYS SEQRES 37 A 525 LEU TRP ARG SER VAL LEU ARG GLN LEU VAL SER LEU GLY SEQRES 38 A 525 TYR LEU SER ALA ASP ASP HIS PHE GLY LEU ARG ALA THR SEQRES 39 A 525 GLY LYS SER ARG GLY ILE LEU LYS GLU GLY GLN LYS LEU SEQRES 40 A 525 LEU LEU ARG GLU ASP THR LEU LEU PRO GLY LEU GLU HIS SEQRES 41 A 525 HIS HIS HIS HIS HIS SEQRES 1 B 525 MET THR ALA ALA PRO ALA ALA LEU HIS ASP ARG ALA LEU SEQRES 2 B 525 HIS LEU LEU GLN THR ILE TRP GLY TYR PRO ALA PHE ARG SEQRES 3 B 525 GLY VAL GLN GLY GLU ILE VAL GLN GLN VAL ALA GLU GLY SEQRES 4 B 525 GLY ASN ALA LEU VAL LEU MET PRO THR GLY GLY GLY LYS SEQRES 5 B 525 SER LEU CYS TYR GLN LEU PRO SER LEU LEU ARG PRO GLY SEQRES 6 B 525 THR GLY ILE VAL VAL SER PRO LEU ILE ALA LEU MET LYS SEQRES 7 B 525 ASP GLN VAL ASP THR LEU ARG GLN ASN GLY VAL ARG ALA SEQRES 8 B 525 ALA PHE LEU ASN SER THR LEU LEU PRO HIS GLU ALA ARG SEQRES 9 B 525 GLU VAL GLU ASP ALA LEU LEU ARG GLY ASP LEU ASP LEU SEQRES 10 B 525 LEU TYR VAL ALA PRO GLU ARG LEU LEU MET PRO ARG THR SEQRES 11 B 525 LEU ASP LEU LEU GLU ARG ALA PRO VAL ALA LEU PHE ALA SEQRES 12 B 525 ILE ASP GLU ALA HIS CYS VAL SER GLN TRP GLY HIS ASP SEQRES 13 B 525 PHE ARG PRO GLU TYR GLN GLN LEU SER VAL LEU ALA GLU SEQRES 14 B 525 ARG PHE PRO GLU LEU PRO ARG VAL ALA LEU THR ALA THR SEQRES 15 B 525 ALA ASP GLU ARG THR ARG ALA ASP ILE LYS SER VAL LEU SEQRES 16 B 525 ARG LEU GLU ASP ALA PRO GLN PHE VAL SER SER PHE ASP SEQRES 17 B 525 ARG PRO ASN ILE GLN TYR ARG VAL GLY LEU LYS ASP SER SEQRES 18 B 525 PRO LYS THR GLN LEU LEU HIS PHE ILE ARG GLU GLU HIS SEQRES 19 B 525 PRO GLY ASP ALA GLY ILE VAL TYR CYS LEU SER ARG LYS SEQRES 20 B 525 SER VAL GLU GLU THR ALA LYS TRP LEU GLN ALA GLN GLY SEQRES 21 B 525 ILE ASP ALA LEU ALA TYR HIS ALA GLY LEU SER SER THR SEQRES 22 B 525 GLU ARG ASN ASN VAL GLN GLU ARG PHE LEU ASN GLU GLU SEQRES 23 B 525 GLY VAL ILE VAL CYS ALA THR VAL ALA PHE GLY MET GLY SEQRES 24 B 525 ILE ASP LYS PRO ASN VAL ARG PHE VAL ALA HIS LEU ASP SEQRES 25 B 525 LEU PRO LYS SER MET GLU GLY TYR TYR GLN GLU THR GLY SEQRES 26 B 525 ARG ALA GLY ARG ASP GLY LEU PRO SER THR ALA TRP MET SEQRES 27 B 525 VAL TYR GLY LEU SER ASP VAL VAL ASN VAL ARG ARG MET SEQRES 28 B 525 LEU ALA GLN SER ASP ALA PRO GLU GLU VAL LYS ARG VAL SEQRES 29 B 525 GLU ALA SER LYS LEU ASP ALA LEU LEU THR TYR CYS GLU SEQRES 30 B 525 ALA ALA THR CYS ARG ARG GLN VAL LEU LEU HIS TYR PHE SEQRES 31 B 525 GLY GLU GLU LEU SER GLU PRO CYS GLY ASN CYS ASP VAL SEQRES 32 B 525 CYS LEU ASN PRO PRO ARG VAL ARG ASP LEU THR ARG GLU SEQRES 33 B 525 ALA GLN MET ALA LEU SER ALA THR ILE ARG THR GLY ASN SEQRES 34 B 525 ARG PHE GLY ALA ALA HIS LEU THR ASP VAL LEU LEU GLY SEQRES 35 B 525 ARG GLU THR ASP LYS VAL LEU ALA GLN GLY HIS HIS GLN SEQRES 36 B 525 LEU PRO THR PHE GLY VAL GLY LYS GLU HIS ASP GLU LYS SEQRES 37 B 525 LEU TRP ARG SER VAL LEU ARG GLN LEU VAL SER LEU GLY SEQRES 38 B 525 TYR LEU SER ALA ASP ASP HIS PHE GLY LEU ARG ALA THR SEQRES 39 B 525 GLY LYS SER ARG GLY ILE LEU LYS GLU GLY GLN LYS LEU SEQRES 40 B 525 LEU LEU ARG GLU ASP THR LEU LEU PRO GLY LEU GLU HIS SEQRES 41 B 525 HIS HIS HIS HIS HIS HET ZN A 801 1 HET ZN B 801 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) HELIX 1 1 HIS A 9 TRP A 20 1 12 HELIX 2 2 VAL A 28 GLU A 38 1 11 HELIX 3 3 GLY A 49 ARG A 63 1 15 HELIX 4 4 LEU A 73 ARG A 85 1 13 HELIX 5 5 LEU A 99 ARG A 112 1 14 HELIX 6 6 ALA A 121 LEU A 126 1 6 HELIX 7 7 MET A 127 ARG A 136 1 10 HELIX 8 8 ALA A 147 SER A 151 5 5 HELIX 9 9 GLU A 160 GLN A 163 5 4 HELIX 10 10 LEU A 164 PHE A 171 1 8 HELIX 11 11 ASP A 184 LEU A 195 1 12 HELIX 12 12 SER A 221 HIS A 234 1 14 HELIX 13 13 SER A 245 GLN A 259 1 15 HELIX 14 14 SER A 271 GLU A 285 1 15 HELIX 15 15 SER A 316 GLY A 325 1 10 HELIX 16 16 GLY A 341 SER A 355 1 15 HELIX 17 17 PRO A 358 GLU A 377 1 20 HELIX 18 18 CYS A 381 PHE A 390 1 10 HELIX 19 19 CYS A 401 ASN A 406 1 6 HELIX 20 20 LEU A 413 THR A 427 1 15 HELIX 21 21 GLY A 432 GLY A 442 1 11 HELIX 22 22 THR A 445 GLN A 451 1 7 HELIX 23 23 GLY A 452 LEU A 456 5 5 HELIX 24 24 ASP A 466 LEU A 480 1 15 HELIX 25 25 SER A 497 LYS A 502 1 6 HELIX 26 26 LEU B 13 TRP B 20 1 8 HELIX 27 27 VAL B 28 ALA B 37 1 10 HELIX 28 28 SER B 53 ARG B 63 1 11 HELIX 29 29 LEU B 73 ARG B 85 1 13 HELIX 30 30 LEU B 99 ARG B 112 1 14 HELIX 31 31 ALA B 121 LEU B 126 1 6 HELIX 32 32 MET B 127 ARG B 136 1 10 HELIX 33 33 ALA B 147 SER B 151 5 5 HELIX 34 34 GLU B 160 LEU B 164 5 5 HELIX 35 35 SER B 165 PHE B 171 1 7 HELIX 36 36 ASP B 184 LEU B 195 1 12 HELIX 37 37 SER B 221 HIS B 234 1 14 HELIX 38 38 SER B 245 GLN B 259 1 15 HELIX 39 39 SER B 271 GLU B 285 1 15 HELIX 40 40 SER B 316 GLY B 325 1 10 HELIX 41 41 GLY B 341 GLN B 354 1 14 HELIX 42 42 PRO B 358 GLU B 377 1 20 HELIX 43 43 CYS B 381 PHE B 390 1 10 HELIX 44 44 CYS B 401 ASN B 406 1 6 HELIX 45 45 LEU B 413 THR B 427 1 15 HELIX 46 46 GLY B 432 GLY B 442 1 11 HELIX 47 47 THR B 445 GLN B 451 1 7 HELIX 48 48 GLY B 452 LEU B 456 5 5 HELIX 49 49 ASP B 466 LEU B 480 1 15 HELIX 50 50 SER B 497 LYS B 502 1 6 SHEET 1 A 7 ALA A 91 LEU A 94 0 SHEET 2 A 7 LEU A 117 VAL A 120 1 O TYR A 119 N ALA A 92 SHEET 3 A 7 THR A 66 VAL A 70 1 N VAL A 69 O LEU A 118 SHEET 4 A 7 VAL A 139 ASP A 145 1 O ALA A 143 N VAL A 70 SHEET 5 A 7 ARG A 176 THR A 180 1 O VAL A 177 N PHE A 142 SHEET 6 A 7 ALA A 42 LEU A 45 1 N VAL A 44 O ALA A 178 SHEET 7 A 7 GLN A 202 VAL A 204 1 O PHE A 203 N LEU A 43 SHEET 1 B 6 ILE A 212 LEU A 218 0 SHEET 2 B 6 SER A 334 TYR A 340 1 O ALA A 336 N GLN A 213 SHEET 3 B 6 VAL A 305 HIS A 310 1 N HIS A 310 O TRP A 337 SHEET 4 B 6 ALA A 238 TYR A 242 1 N TYR A 242 O ALA A 309 SHEET 5 B 6 ILE A 289 ALA A 292 1 O VAL A 290 N VAL A 241 SHEET 6 B 6 ALA A 263 TYR A 266 1 N LEU A 264 O CYS A 291 SHEET 1 C 2 VAL A 410 ASP A 412 0 SHEET 2 C 2 LEU A 508 ARG A 510 -1 O LEU A 509 N ARG A 411 SHEET 1 D 2 LEU A 483 SER A 484 0 SHEET 2 D 2 ARG A 492 ALA A 493 -1 O ARG A 492 N SER A 484 SHEET 1 E 7 ALA B 91 LEU B 94 0 SHEET 2 E 7 LEU B 117 VAL B 120 1 O TYR B 119 N LEU B 94 SHEET 3 E 7 THR B 66 VAL B 70 1 N VAL B 69 O VAL B 120 SHEET 4 E 7 VAL B 139 ASP B 145 1 O LEU B 141 N ILE B 68 SHEET 5 E 7 ARG B 176 THR B 180 1 O VAL B 177 N PHE B 142 SHEET 6 E 7 ALA B 42 LEU B 45 1 N VAL B 44 O ALA B 178 SHEET 7 E 7 GLN B 202 VAL B 204 1 O PHE B 203 N LEU B 43 SHEET 1 F 6 ILE B 212 LEU B 218 0 SHEET 2 F 6 SER B 334 TYR B 340 1 O ALA B 336 N GLN B 213 SHEET 3 F 6 PHE B 307 HIS B 310 1 N VAL B 308 O TRP B 337 SHEET 4 F 6 GLY B 239 TYR B 242 1 N ILE B 240 O ALA B 309 SHEET 5 F 6 ILE B 289 ALA B 292 1 O VAL B 290 N VAL B 241 SHEET 6 F 6 ALA B 263 TYR B 266 1 N LEU B 264 O CYS B 291 SHEET 1 G 2 VAL B 410 ASP B 412 0 SHEET 2 G 2 LEU B 508 ARG B 510 -1 O LEU B 509 N ARG B 411 SHEET 1 H 2 LEU B 483 SER B 484 0 SHEET 2 H 2 ARG B 492 ALA B 493 -1 O ARG B 492 N SER B 484 LINK SG CYS A 381 ZN ZN A 801 1555 1555 2.37 LINK SG CYS A 398 ZN ZN A 801 1555 1555 2.38 LINK SG CYS A 401 ZN ZN A 801 1555 1555 2.31 LINK SG CYS A 404 ZN ZN A 801 1555 1555 2.39 LINK SG CYS B 381 ZN ZN B 801 1555 1555 2.37 LINK SG CYS B 398 ZN ZN B 801 1555 1555 2.38 LINK SG CYS B 401 ZN ZN B 801 1555 1555 2.31 LINK SG CYS B 404 ZN ZN B 801 1555 1555 2.41 SITE 1 AC1 5 CYS A 381 CYS A 398 GLY A 399 CYS A 401 SITE 2 AC1 5 CYS A 404 SITE 1 AC2 4 CYS B 381 CYS B 398 CYS B 401 CYS B 404 CRYST1 85.791 98.528 152.880 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011656 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010149 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006541 0.00000