data_4Q5T # _entry.id 4Q5T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4Q5T pdb_00004q5t 10.2210/pdb4q5t/pdb RCSB RCSB085640 ? ? WWPDB D_1000085640 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-417498 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4Q5T _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-04-17 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of an atmB (putative membrane lipoprotein) from Streptococcus mutans UA159 at 1.91 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4Q5T _cell.length_a 58.021 _cell.length_b 106.053 _cell.length_c 95.220 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4Q5T _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Lipoprotein 28816.438 1 ? ? 'UNP residues 24-280' ? 2 non-polymer syn SELENOMETHIONINE 196.106 1 ? ? ? ? 3 non-polymer syn 'NONAETHYLENE GLYCOL' 414.488 3 ? ? ? ? 4 water nat water 18.015 154 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GQKNDKNTLTVGV(MSE)T(MSE)TDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNW NKENKGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKN IKSNPKNLDIKEVDASQTARNLASVDAAVVNNSYAVPAKIDFKTSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKL IKAYHTDAVKKVIKKTAKGVDEPVW ; _entity_poly.pdbx_seq_one_letter_code_can ;GQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKENKGDL VTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKNIKSNPKNL DIKEVDASQTARNLASVDAAVVNNSYAVPAKIDFKTSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDA VKKVIKKTAKGVDEPVW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-417498 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 LYS n 1 4 ASN n 1 5 ASP n 1 6 LYS n 1 7 ASN n 1 8 THR n 1 9 LEU n 1 10 THR n 1 11 VAL n 1 12 GLY n 1 13 VAL n 1 14 MSE n 1 15 THR n 1 16 MSE n 1 17 THR n 1 18 ASP n 1 19 SER n 1 20 ASP n 1 21 LYS n 1 22 GLU n 1 23 ARG n 1 24 TRP n 1 25 ASP n 1 26 LYS n 1 27 ILE n 1 28 GLU n 1 29 GLU n 1 30 LEU n 1 31 LEU n 1 32 LYS n 1 33 LYS n 1 34 GLU n 1 35 ASN n 1 36 ILE n 1 37 LYS n 1 38 LEU n 1 39 LYS n 1 40 PHE n 1 41 LYS n 1 42 GLU n 1 43 PHE n 1 44 THR n 1 45 ASP n 1 46 TYR n 1 47 SER n 1 48 GLN n 1 49 PRO n 1 50 ASN n 1 51 LYS n 1 52 ALA n 1 53 LEU n 1 54 LYS n 1 55 ASN n 1 56 GLY n 1 57 GLU n 1 58 ILE n 1 59 ASP n 1 60 ILE n 1 61 ASN n 1 62 SER n 1 63 PHE n 1 64 GLN n 1 65 HIS n 1 66 TYR n 1 67 ASN n 1 68 PHE n 1 69 LEU n 1 70 ASN n 1 71 ASN n 1 72 TRP n 1 73 ASN n 1 74 LYS n 1 75 GLU n 1 76 ASN n 1 77 LYS n 1 78 GLY n 1 79 ASP n 1 80 LEU n 1 81 VAL n 1 82 THR n 1 83 VAL n 1 84 ALA n 1 85 GLU n 1 86 THR n 1 87 TYR n 1 88 ILE n 1 89 SER n 1 90 PRO n 1 91 ILE n 1 92 ASN n 1 93 LEU n 1 94 PHE n 1 95 SER n 1 96 GLY n 1 97 THR n 1 98 GLU n 1 99 ASN n 1 100 GLY n 1 101 LYS n 1 102 ALA n 1 103 LYS n 1 104 TYR n 1 105 SER n 1 106 SER n 1 107 ALA n 1 108 LYS n 1 109 GLU n 1 110 ILE n 1 111 PRO n 1 112 ASN n 1 113 GLY n 1 114 GLY n 1 115 GLN n 1 116 ILE n 1 117 ALA n 1 118 ILE n 1 119 PRO n 1 120 ASN n 1 121 ASP n 1 122 ALA n 1 123 THR n 1 124 ASN n 1 125 GLU n 1 126 SER n 1 127 ARG n 1 128 ALA n 1 129 LEU n 1 130 TYR n 1 131 VAL n 1 132 LEU n 1 133 GLN n 1 134 ASP n 1 135 ALA n 1 136 GLY n 1 137 LEU n 1 138 ILE n 1 139 LYS n 1 140 LEU n 1 141 ASN n 1 142 VAL n 1 143 SER n 1 144 GLY n 1 145 ASP n 1 146 GLU n 1 147 LEU n 1 148 ALA n 1 149 THR n 1 150 VAL n 1 151 LYS n 1 152 ASN n 1 153 ILE n 1 154 LYS n 1 155 SER n 1 156 ASN n 1 157 PRO n 1 158 LYS n 1 159 ASN n 1 160 LEU n 1 161 ASP n 1 162 ILE n 1 163 LYS n 1 164 GLU n 1 165 VAL n 1 166 ASP n 1 167 ALA n 1 168 SER n 1 169 GLN n 1 170 THR n 1 171 ALA n 1 172 ARG n 1 173 ASN n 1 174 LEU n 1 175 ALA n 1 176 SER n 1 177 VAL n 1 178 ASP n 1 179 ALA n 1 180 ALA n 1 181 VAL n 1 182 VAL n 1 183 ASN n 1 184 ASN n 1 185 SER n 1 186 TYR n 1 187 ALA n 1 188 VAL n 1 189 PRO n 1 190 ALA n 1 191 LYS n 1 192 ILE n 1 193 ASP n 1 194 PHE n 1 195 LYS n 1 196 THR n 1 197 SER n 1 198 LEU n 1 199 TYR n 1 200 LYS n 1 201 GLU n 1 202 LYS n 1 203 VAL n 1 204 ASN n 1 205 GLU n 1 206 GLY n 1 207 SER n 1 208 LYS n 1 209 GLN n 1 210 TRP n 1 211 ILE n 1 212 ASN n 1 213 ILE n 1 214 ILE n 1 215 ALA n 1 216 ALA n 1 217 GLN n 1 218 LYS n 1 219 ASN n 1 220 TRP n 1 221 LYS n 1 222 LYS n 1 223 SER n 1 224 LYS n 1 225 LYS n 1 226 ALA n 1 227 ALA n 1 228 ALA n 1 229 ILE n 1 230 LYS n 1 231 LYS n 1 232 LEU n 1 233 ILE n 1 234 LYS n 1 235 ALA n 1 236 TYR n 1 237 HIS n 1 238 THR n 1 239 ASP n 1 240 ALA n 1 241 VAL n 1 242 LYS n 1 243 LYS n 1 244 VAL n 1 245 ILE n 1 246 LYS n 1 247 LYS n 1 248 THR n 1 249 ALA n 1 250 LYS n 1 251 GLY n 1 252 VAL n 1 253 ASP n 1 254 GLU n 1 255 PRO n 1 256 VAL n 1 257 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'atmB, SMU_1941' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 700610 / UA159' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus mutans UA159' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 210007 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code I6L927_STRMU _struct_ref.pdbx_db_accession I6L927 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QKNDKNTLTVGVMTMTDSDKERWDKIEELLKKENIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKENKGDLV TVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKNIKSNPKNLD IKEVDASQTARNLASVDAAVVNNSYAVPAKIDFKTSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAV KKVIKKTAKGVDEPVW ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4Q5T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 257 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession I6L927 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 280 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 280 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4Q5T _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code I6L927 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2PE non-polymer . 'NONAETHYLENE GLYCOL' ? 'C18 H38 O10' 414.488 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4Q5T # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;0.200M sodium chloride, 50.00% polyethylene glycol 400, 0.0100M Barium Chloride, 0.1M CHES pH 9.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'KOHZU: Double Crystal Si(111)' _diffrn_detector.pdbx_collection_date 2012-09-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979068 1.0 2 0.979338 1.0 3 0.953725 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list 0.979068,0.979338,0.953725 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 4Q5T _reflns.d_resolution_high 1.91 _reflns.d_resolution_low 28.777 _reflns.number_obs 23167 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_netI_over_sigmaI 11.110 _reflns.percent_possible_obs 98.000 _reflns.B_iso_Wilson_estimate 23.682 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.910 1.980 10172 ? 4385 0.448 2.0 ? ? ? ? ? 96.600 1 1 1.980 2.060 10262 ? 4401 0.310 2.7 ? ? ? ? ? 99.000 2 1 2.060 2.150 9478 ? 4093 0.243 3.6 ? ? ? ? ? 96.400 3 1 2.150 2.260 9817 ? 4212 0.168 5.2 ? ? ? ? ? 97.700 4 1 2.260 2.410 10937 ? 4652 0.132 6.2 ? ? ? ? ? 98.900 5 1 2.410 2.590 9984 ? 4228 0.098 8.0 ? ? ? ? ? 99.200 6 1 2.590 2.850 10243 ? 4367 0.075 10.6 ? ? ? ? ? 98.500 7 1 2.850 3.260 10277 ? 4370 0.049 15.4 ? ? ? ? ? 99.200 8 1 3.260 4.100 9897 ? 4280 0.031 24.8 ? ? ? ? ? 96.200 9 1 4.100 28.777 10512 ? 4406 0.022 32.3 ? ? ? ? ? 98.100 10 1 # _refine.entry_id 4Q5T _refine.ls_d_res_high 1.9070 _refine.ls_d_res_low 28.777 _refine.pdbx_ls_sigma_F 1.220 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.2400 _refine.ls_number_reflns_obs 23128 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ;1. ZERO OCCUPANCY HYDROGENS WERE INCLUDED DURING REFINEMENT TO IMPROVE THE ANTI-BUMPING RESTRAINTS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 4. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. LIGAND SELENOMETHIONINE HAS BEEN MODELED BASED ON DENSITY AND ANOMALOUS DIFFERENCE FOURIER MAP. 6. NONAETHYLENE GLYCOL (2PE) MOLECULES FROM THE CRYSTALLIZATION SOLUTION ARE MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1850 _refine.ls_R_factor_R_work 0.1827 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2302 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1400 _refine.ls_number_reflns_R_free 1189 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 41.4479 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2100 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 132.530 _refine.B_iso_min 17.340 _refine.pdbx_overall_phase_error 23.8700 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2005 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 154 _refine_hist.number_atoms_total 2208 _refine_hist.d_res_high 1.9070 _refine_hist.d_res_low 28.777 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2103 0.012 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2830 1.239 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 319 0.072 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 358 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 813 16.777 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.907 1.9934 8 98.0000 2685 . 0.2941 0.2929 . 147 . 2832 . . 'X-RAY DIFFRACTION' 1.9934 2.0985 8 99.0000 2655 . 0.2362 0.2989 . 155 . 2810 . . 'X-RAY DIFFRACTION' 2.0985 2.2299 8 100.0000 2742 . 0.1966 0.2595 . 140 . 2882 . . 'X-RAY DIFFRACTION' 2.2299 2.4020 8 99.0000 2710 . 0.1815 0.2352 . 150 . 2860 . . 'X-RAY DIFFRACTION' 2.4020 2.6436 8 100.0000 2743 . 0.1648 0.2211 . 153 . 2896 . . 'X-RAY DIFFRACTION' 2.6436 3.0258 8 100.0000 2755 . 0.1741 0.2237 . 158 . 2913 . . 'X-RAY DIFFRACTION' 3.0258 3.8108 8 99.0000 2755 . 0.1668 0.2455 . 149 . 2904 . . 'X-RAY DIFFRACTION' 3.8108 28.7805 8 99.0000 2894 . 0.1720 0.1890 . 137 . 3031 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4Q5T _struct.title 'Crystal structure of an atmB (putative membrane lipoprotein) from Streptococcus mutans UA159 at 1.91 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.text ;methionine-binding, NLPA lipoprotein, PF03180 family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, TRANSPORT PROTEIN ; _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.entry_id 4Q5T # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? ASP A 5 ? GLY A 0 ASP A 28 5 ? 5 HELX_P HELX_P2 2 THR A 17 ? LYS A 33 ? THR A 40 LYS A 56 1 ? 17 HELX_P HELX_P3 3 GLN A 48 ? ASN A 55 ? GLN A 71 ASN A 78 1 ? 8 HELX_P HELX_P4 4 TYR A 66 ? LYS A 77 ? TYR A 89 LYS A 100 1 ? 12 HELX_P HELX_P5 5 SER A 106 ? ILE A 110 ? SER A 129 ILE A 133 5 ? 5 HELX_P HELX_P6 6 ASP A 121 ? ALA A 135 ? ASP A 144 ALA A 158 1 ? 15 HELX_P HELX_P7 7 THR A 149 ? LYS A 151 ? THR A 172 LYS A 174 5 ? 3 HELX_P HELX_P8 8 ASP A 166 ? SER A 168 ? ASP A 189 SER A 191 5 ? 3 HELX_P HELX_P9 9 GLN A 169 ? LEU A 174 ? GLN A 192 LEU A 197 1 ? 6 HELX_P HELX_P10 10 ASN A 183 ? VAL A 188 ? ASN A 206 VAL A 211 1 ? 6 HELX_P HELX_P11 11 ASP A 193 ? LYS A 195 ? ASP A 216 LYS A 218 5 ? 3 HELX_P HELX_P12 12 ASN A 204 ? GLN A 209 ? ASN A 227 GLN A 232 5 ? 6 HELX_P HELX_P13 13 ASN A 219 ? SER A 223 ? ASN A 242 SER A 246 5 ? 5 HELX_P HELX_P14 14 LYS A 225 ? HIS A 237 ? LYS A 248 HIS A 260 1 ? 13 HELX_P HELX_P15 15 THR A 238 ? LYS A 250 ? THR A 261 LYS A 273 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 13 C ? ? ? 1_555 A MSE 14 N ? ? A VAL 36 A MSE 37 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A MSE 14 C ? ? ? 1_555 A THR 15 N ? ? A MSE 37 A THR 38 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A THR 15 C ? ? ? 1_555 A MSE 16 N ? ? A THR 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MSE 16 C ? ? ? 1_555 A THR 17 N ? ? A MSE 39 A THR 40 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 37 ? PHE A 43 ? LYS A 60 PHE A 66 A 2 THR A 8 ? MSE A 14 ? THR A 31 MSE A 37 A 3 ILE A 60 ? HIS A 65 ? ILE A 83 HIS A 88 A 4 ILE A 211 ? ALA A 216 ? ILE A 234 ALA A 239 A 5 VAL A 81 ? ILE A 88 ? VAL A 104 ILE A 111 A 6 GLU A 254 ? PRO A 255 ? GLU A 277 PRO A 278 B 1 ASP A 161 ? VAL A 165 ? ASP A 184 VAL A 188 B 2 GLN A 115 ? PRO A 119 ? GLN A 138 PRO A 142 B 3 ALA A 179 ? VAL A 182 ? ALA A 202 VAL A 205 B 4 ASN A 92 ? SER A 95 ? ASN A 115 SER A 118 B 5 SER A 197 ? LYS A 200 ? SER A 220 LYS A 223 C 1 THR A 97 ? GLU A 98 ? THR A 120 GLU A 121 C 2 LYS A 101 ? ALA A 102 ? LYS A 124 ALA A 125 D 1 LYS A 139 ? LEU A 140 ? LYS A 162 LEU A 163 D 2 ILE A 153 ? SER A 155 ? ILE A 176 SER A 178 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 39 ? O LYS A 62 N VAL A 11 ? N VAL A 34 A 2 3 N GLY A 12 ? N GLY A 35 O SER A 62 ? O SER A 85 A 3 4 N GLN A 64 ? N GLN A 87 O ILE A 213 ? O ILE A 236 A 4 5 O ASN A 212 ? O ASN A 235 N TYR A 87 ? N TYR A 110 A 5 6 N ILE A 88 ? N ILE A 111 O GLU A 254 ? O GLU A 277 B 1 2 O VAL A 165 ? O VAL A 188 N ILE A 118 ? N ILE A 141 B 2 3 N ALA A 117 ? N ALA A 140 O VAL A 181 ? O VAL A 204 B 3 4 O ALA A 180 ? O ALA A 203 N PHE A 94 ? N PHE A 117 B 4 5 N LEU A 93 ? N LEU A 116 O LEU A 198 ? O LEU A 221 C 1 2 N GLU A 98 ? N GLU A 121 O LYS A 101 ? O LYS A 124 D 1 2 N LYS A 139 ? N LYS A 162 O LYS A 154 ? O LYS A 177 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 2PE 301 ? 5 'BINDING SITE FOR RESIDUE 2PE A 301' AC2 Software A 2PE 302 ? 8 'BINDING SITE FOR RESIDUE 2PE A 302' AC3 Software A 2PE 303 ? 4 'BINDING SITE FOR RESIDUE 2PE A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 193 ? ASP A 216 . ? 1_555 ? 2 AC1 5 PHE A 194 ? PHE A 217 . ? 4_566 ? 3 AC1 5 LYS A 195 ? LYS A 218 . ? 1_555 ? 4 AC1 5 LYS A 250 ? LYS A 273 . ? 4_566 ? 5 AC1 5 VAL A 252 ? VAL A 275 . ? 4_566 ? 6 AC2 8 LYS A 54 ? LYS A 77 . ? 1_555 ? 7 AC2 8 ASP A 79 ? ASP A 102 . ? 1_555 ? 8 AC2 8 LYS A 103 ? LYS A 126 . ? 6_554 ? 9 AC2 8 GLY A 113 ? GLY A 136 . ? 6_554 ? 10 AC2 8 SER A 176 ? SER A 199 . ? 6_554 ? 11 AC2 8 GLN A 217 ? GLN A 240 . ? 1_555 ? 12 AC2 8 ASN A 219 ? ASN A 242 . ? 1_555 ? 13 AC2 8 HOH F . ? HOH A 543 . ? 6_554 ? 14 AC3 4 ALA A 171 ? ALA A 194 . ? 1_555 ? 15 AC3 4 ALA A 190 ? ALA A 213 . ? 1_555 ? 16 AC3 4 LYS A 191 ? LYS A 214 . ? 1_555 ? 17 AC3 4 HOH F . ? HOH A 527 . ? 1_555 ? # _atom_sites.entry_id 4Q5T _atom_sites.fract_transf_matrix[1][1] 0.017235 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009429 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010502 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 GLN 2 25 25 GLN GLN A . n A 1 3 LYS 3 26 26 LYS LYS A . n A 1 4 ASN 4 27 27 ASN ASN A . n A 1 5 ASP 5 28 28 ASP ASP A . n A 1 6 LYS 6 29 29 LYS LYS A . n A 1 7 ASN 7 30 30 ASN ASN A . n A 1 8 THR 8 31 31 THR THR A . n A 1 9 LEU 9 32 32 LEU LEU A . n A 1 10 THR 10 33 33 THR THR A . n A 1 11 VAL 11 34 34 VAL VAL A . n A 1 12 GLY 12 35 35 GLY GLY A . n A 1 13 VAL 13 36 36 VAL VAL A . n A 1 14 MSE 14 37 37 MSE MSE A . n A 1 15 THR 15 38 38 THR THR A . n A 1 16 MSE 16 39 39 MSE MSE A . n A 1 17 THR 17 40 40 THR THR A . n A 1 18 ASP 18 41 41 ASP ASP A . n A 1 19 SER 19 42 42 SER SER A . n A 1 20 ASP 20 43 43 ASP ASP A . n A 1 21 LYS 21 44 44 LYS LYS A . n A 1 22 GLU 22 45 45 GLU GLU A . n A 1 23 ARG 23 46 46 ARG ARG A . n A 1 24 TRP 24 47 47 TRP TRP A . n A 1 25 ASP 25 48 48 ASP ASP A . n A 1 26 LYS 26 49 49 LYS LYS A . n A 1 27 ILE 27 50 50 ILE ILE A . n A 1 28 GLU 28 51 51 GLU GLU A . n A 1 29 GLU 29 52 52 GLU GLU A . n A 1 30 LEU 30 53 53 LEU LEU A . n A 1 31 LEU 31 54 54 LEU LEU A . n A 1 32 LYS 32 55 55 LYS LYS A . n A 1 33 LYS 33 56 56 LYS LYS A . n A 1 34 GLU 34 57 57 GLU GLU A . n A 1 35 ASN 35 58 58 ASN ASN A . n A 1 36 ILE 36 59 59 ILE ILE A . n A 1 37 LYS 37 60 60 LYS LYS A . n A 1 38 LEU 38 61 61 LEU LEU A . n A 1 39 LYS 39 62 62 LYS LYS A . n A 1 40 PHE 40 63 63 PHE PHE A . n A 1 41 LYS 41 64 64 LYS LYS A . n A 1 42 GLU 42 65 65 GLU GLU A . n A 1 43 PHE 43 66 66 PHE PHE A . n A 1 44 THR 44 67 67 THR THR A . n A 1 45 ASP 45 68 68 ASP ASP A . n A 1 46 TYR 46 69 69 TYR TYR A . n A 1 47 SER 47 70 70 SER SER A . n A 1 48 GLN 48 71 71 GLN GLN A . n A 1 49 PRO 49 72 72 PRO PRO A . n A 1 50 ASN 50 73 73 ASN ASN A . n A 1 51 LYS 51 74 74 LYS LYS A . n A 1 52 ALA 52 75 75 ALA ALA A . n A 1 53 LEU 53 76 76 LEU LEU A . n A 1 54 LYS 54 77 77 LYS LYS A . n A 1 55 ASN 55 78 78 ASN ASN A . n A 1 56 GLY 56 79 79 GLY GLY A . n A 1 57 GLU 57 80 80 GLU GLU A . n A 1 58 ILE 58 81 81 ILE ILE A . n A 1 59 ASP 59 82 82 ASP ASP A . n A 1 60 ILE 60 83 83 ILE ILE A . n A 1 61 ASN 61 84 84 ASN ASN A . n A 1 62 SER 62 85 85 SER SER A . n A 1 63 PHE 63 86 86 PHE PHE A . n A 1 64 GLN 64 87 87 GLN GLN A . n A 1 65 HIS 65 88 88 HIS HIS A . n A 1 66 TYR 66 89 89 TYR TYR A . n A 1 67 ASN 67 90 90 ASN ASN A . n A 1 68 PHE 68 91 91 PHE PHE A . n A 1 69 LEU 69 92 92 LEU LEU A . n A 1 70 ASN 70 93 93 ASN ASN A . n A 1 71 ASN 71 94 94 ASN ASN A . n A 1 72 TRP 72 95 95 TRP TRP A . n A 1 73 ASN 73 96 96 ASN ASN A . n A 1 74 LYS 74 97 97 LYS LYS A . n A 1 75 GLU 75 98 98 GLU GLU A . n A 1 76 ASN 76 99 99 ASN ASN A . n A 1 77 LYS 77 100 100 LYS LYS A . n A 1 78 GLY 78 101 101 GLY GLY A . n A 1 79 ASP 79 102 102 ASP ASP A . n A 1 80 LEU 80 103 103 LEU LEU A . n A 1 81 VAL 81 104 104 VAL VAL A . n A 1 82 THR 82 105 105 THR THR A . n A 1 83 VAL 83 106 106 VAL VAL A . n A 1 84 ALA 84 107 107 ALA ALA A . n A 1 85 GLU 85 108 108 GLU GLU A . n A 1 86 THR 86 109 109 THR THR A . n A 1 87 TYR 87 110 110 TYR TYR A . n A 1 88 ILE 88 111 111 ILE ILE A . n A 1 89 SER 89 112 112 SER SER A . n A 1 90 PRO 90 113 113 PRO PRO A . n A 1 91 ILE 91 114 114 ILE ILE A . n A 1 92 ASN 92 115 115 ASN ASN A . n A 1 93 LEU 93 116 116 LEU LEU A . n A 1 94 PHE 94 117 117 PHE PHE A . n A 1 95 SER 95 118 118 SER SER A . n A 1 96 GLY 96 119 119 GLY GLY A . n A 1 97 THR 97 120 120 THR THR A . n A 1 98 GLU 98 121 121 GLU GLU A . n A 1 99 ASN 99 122 122 ASN ASN A . n A 1 100 GLY 100 123 123 GLY GLY A . n A 1 101 LYS 101 124 124 LYS LYS A . n A 1 102 ALA 102 125 125 ALA ALA A . n A 1 103 LYS 103 126 126 LYS LYS A . n A 1 104 TYR 104 127 127 TYR TYR A . n A 1 105 SER 105 128 128 SER SER A . n A 1 106 SER 106 129 129 SER SER A . n A 1 107 ALA 107 130 130 ALA ALA A . n A 1 108 LYS 108 131 131 LYS LYS A . n A 1 109 GLU 109 132 132 GLU GLU A . n A 1 110 ILE 110 133 133 ILE ILE A . n A 1 111 PRO 111 134 134 PRO PRO A . n A 1 112 ASN 112 135 135 ASN ASN A . n A 1 113 GLY 113 136 136 GLY GLY A . n A 1 114 GLY 114 137 137 GLY GLY A . n A 1 115 GLN 115 138 138 GLN GLN A . n A 1 116 ILE 116 139 139 ILE ILE A . n A 1 117 ALA 117 140 140 ALA ALA A . n A 1 118 ILE 118 141 141 ILE ILE A . n A 1 119 PRO 119 142 142 PRO PRO A . n A 1 120 ASN 120 143 143 ASN ASN A . n A 1 121 ASP 121 144 144 ASP ASP A . n A 1 122 ALA 122 145 145 ALA ALA A . n A 1 123 THR 123 146 146 THR THR A . n A 1 124 ASN 124 147 147 ASN ASN A . n A 1 125 GLU 125 148 148 GLU GLU A . n A 1 126 SER 126 149 149 SER SER A . n A 1 127 ARG 127 150 150 ARG ARG A . n A 1 128 ALA 128 151 151 ALA ALA A . n A 1 129 LEU 129 152 152 LEU LEU A . n A 1 130 TYR 130 153 153 TYR TYR A . n A 1 131 VAL 131 154 154 VAL VAL A . n A 1 132 LEU 132 155 155 LEU LEU A . n A 1 133 GLN 133 156 156 GLN GLN A . n A 1 134 ASP 134 157 157 ASP ASP A . n A 1 135 ALA 135 158 158 ALA ALA A . n A 1 136 GLY 136 159 159 GLY GLY A . n A 1 137 LEU 137 160 160 LEU LEU A . n A 1 138 ILE 138 161 161 ILE ILE A . n A 1 139 LYS 139 162 162 LYS LYS A . n A 1 140 LEU 140 163 163 LEU LEU A . n A 1 141 ASN 141 164 164 ASN ASN A . n A 1 142 VAL 142 165 165 VAL VAL A . n A 1 143 SER 143 166 166 SER SER A . n A 1 144 GLY 144 167 167 GLY GLY A . n A 1 145 ASP 145 168 168 ASP ASP A . n A 1 146 GLU 146 169 169 GLU GLU A . n A 1 147 LEU 147 170 170 LEU LEU A . n A 1 148 ALA 148 171 171 ALA ALA A . n A 1 149 THR 149 172 172 THR THR A . n A 1 150 VAL 150 173 173 VAL VAL A . n A 1 151 LYS 151 174 174 LYS LYS A . n A 1 152 ASN 152 175 175 ASN ASN A . n A 1 153 ILE 153 176 176 ILE ILE A . n A 1 154 LYS 154 177 177 LYS LYS A . n A 1 155 SER 155 178 178 SER SER A . n A 1 156 ASN 156 179 179 ASN ASN A . n A 1 157 PRO 157 180 180 PRO PRO A . n A 1 158 LYS 158 181 181 LYS LYS A . n A 1 159 ASN 159 182 182 ASN ASN A . n A 1 160 LEU 160 183 183 LEU LEU A . n A 1 161 ASP 161 184 184 ASP ASP A . n A 1 162 ILE 162 185 185 ILE ILE A . n A 1 163 LYS 163 186 186 LYS LYS A . n A 1 164 GLU 164 187 187 GLU GLU A . n A 1 165 VAL 165 188 188 VAL VAL A . n A 1 166 ASP 166 189 189 ASP ASP A . n A 1 167 ALA 167 190 190 ALA ALA A . n A 1 168 SER 168 191 191 SER SER A . n A 1 169 GLN 169 192 192 GLN GLN A . n A 1 170 THR 170 193 193 THR THR A . n A 1 171 ALA 171 194 194 ALA ALA A . n A 1 172 ARG 172 195 195 ARG ARG A . n A 1 173 ASN 173 196 196 ASN ASN A . n A 1 174 LEU 174 197 197 LEU LEU A . n A 1 175 ALA 175 198 198 ALA ALA A . n A 1 176 SER 176 199 199 SER SER A . n A 1 177 VAL 177 200 200 VAL VAL A . n A 1 178 ASP 178 201 201 ASP ASP A . n A 1 179 ALA 179 202 202 ALA ALA A . n A 1 180 ALA 180 203 203 ALA ALA A . n A 1 181 VAL 181 204 204 VAL VAL A . n A 1 182 VAL 182 205 205 VAL VAL A . n A 1 183 ASN 183 206 206 ASN ASN A . n A 1 184 ASN 184 207 207 ASN ASN A . n A 1 185 SER 185 208 208 SER SER A . n A 1 186 TYR 186 209 209 TYR TYR A . n A 1 187 ALA 187 210 210 ALA ALA A . n A 1 188 VAL 188 211 211 VAL VAL A . n A 1 189 PRO 189 212 212 PRO PRO A . n A 1 190 ALA 190 213 213 ALA ALA A . n A 1 191 LYS 191 214 214 LYS LYS A . n A 1 192 ILE 192 215 215 ILE ILE A . n A 1 193 ASP 193 216 216 ASP ASP A . n A 1 194 PHE 194 217 217 PHE PHE A . n A 1 195 LYS 195 218 218 LYS LYS A . n A 1 196 THR 196 219 219 THR THR A . n A 1 197 SER 197 220 220 SER SER A . n A 1 198 LEU 198 221 221 LEU LEU A . n A 1 199 TYR 199 222 222 TYR TYR A . n A 1 200 LYS 200 223 223 LYS LYS A . n A 1 201 GLU 201 224 224 GLU GLU A . n A 1 202 LYS 202 225 225 LYS LYS A . n A 1 203 VAL 203 226 226 VAL VAL A . n A 1 204 ASN 204 227 227 ASN ASN A . n A 1 205 GLU 205 228 228 GLU GLU A . n A 1 206 GLY 206 229 229 GLY GLY A . n A 1 207 SER 207 230 230 SER SER A . n A 1 208 LYS 208 231 231 LYS LYS A . n A 1 209 GLN 209 232 232 GLN GLN A . n A 1 210 TRP 210 233 233 TRP TRP A . n A 1 211 ILE 211 234 234 ILE ILE A . n A 1 212 ASN 212 235 235 ASN ASN A . n A 1 213 ILE 213 236 236 ILE ILE A . n A 1 214 ILE 214 237 237 ILE ILE A . n A 1 215 ALA 215 238 238 ALA ALA A . n A 1 216 ALA 216 239 239 ALA ALA A . n A 1 217 GLN 217 240 240 GLN GLN A . n A 1 218 LYS 218 241 241 LYS LYS A . n A 1 219 ASN 219 242 242 ASN ASN A . n A 1 220 TRP 220 243 243 TRP TRP A . n A 1 221 LYS 221 244 244 LYS LYS A . n A 1 222 LYS 222 245 245 LYS LYS A . n A 1 223 SER 223 246 246 SER SER A . n A 1 224 LYS 224 247 247 LYS LYS A . n A 1 225 LYS 225 248 248 LYS LYS A . n A 1 226 ALA 226 249 249 ALA ALA A . n A 1 227 ALA 227 250 250 ALA ALA A . n A 1 228 ALA 228 251 251 ALA ALA A . n A 1 229 ILE 229 252 252 ILE ILE A . n A 1 230 LYS 230 253 253 LYS LYS A . n A 1 231 LYS 231 254 254 LYS LYS A . n A 1 232 LEU 232 255 255 LEU LEU A . n A 1 233 ILE 233 256 256 ILE ILE A . n A 1 234 LYS 234 257 257 LYS LYS A . n A 1 235 ALA 235 258 258 ALA ALA A . n A 1 236 TYR 236 259 259 TYR TYR A . n A 1 237 HIS 237 260 260 HIS HIS A . n A 1 238 THR 238 261 261 THR THR A . n A 1 239 ASP 239 262 262 ASP ASP A . n A 1 240 ALA 240 263 263 ALA ALA A . n A 1 241 VAL 241 264 264 VAL VAL A . n A 1 242 LYS 242 265 265 LYS LYS A . n A 1 243 LYS 243 266 266 LYS LYS A . n A 1 244 VAL 244 267 267 VAL VAL A . n A 1 245 ILE 245 268 268 ILE ILE A . n A 1 246 LYS 246 269 269 LYS LYS A . n A 1 247 LYS 247 270 270 LYS LYS A . n A 1 248 THR 248 271 271 THR THR A . n A 1 249 ALA 249 272 272 ALA ALA A . n A 1 250 LYS 250 273 273 LYS LYS A . n A 1 251 GLY 251 274 274 GLY GLY A . n A 1 252 VAL 252 275 275 VAL VAL A . n A 1 253 ASP 253 276 276 ASP ASP A . n A 1 254 GLU 254 277 277 GLU GLU A . n A 1 255 PRO 255 278 278 PRO PRO A . n A 1 256 VAL 256 279 279 VAL VAL A . n A 1 257 TRP 257 280 280 TRP TRP A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MSE 1 300 300 MSE MSE A . C 3 2PE 1 301 301 2PE 2PE A . D 3 2PE 1 302 302 2PE 2PE A . E 3 2PE 1 303 303 2PE 2PE A . F 4 HOH 1 401 304 HOH HOH A . F 4 HOH 2 402 305 HOH HOH A . F 4 HOH 3 403 306 HOH HOH A . F 4 HOH 4 404 307 HOH HOH A . F 4 HOH 5 405 308 HOH HOH A . F 4 HOH 6 406 309 HOH HOH A . F 4 HOH 7 407 310 HOH HOH A . F 4 HOH 8 408 311 HOH HOH A . F 4 HOH 9 409 312 HOH HOH A . F 4 HOH 10 410 313 HOH HOH A . F 4 HOH 11 411 314 HOH HOH A . F 4 HOH 12 412 315 HOH HOH A . F 4 HOH 13 413 316 HOH HOH A . F 4 HOH 14 414 317 HOH HOH A . F 4 HOH 15 415 318 HOH HOH A . F 4 HOH 16 416 319 HOH HOH A . F 4 HOH 17 417 320 HOH HOH A . F 4 HOH 18 418 321 HOH HOH A . F 4 HOH 19 419 322 HOH HOH A . F 4 HOH 20 420 323 HOH HOH A . F 4 HOH 21 421 324 HOH HOH A . F 4 HOH 22 422 325 HOH HOH A . F 4 HOH 23 423 326 HOH HOH A . F 4 HOH 24 424 327 HOH HOH A . F 4 HOH 25 425 328 HOH HOH A . F 4 HOH 26 426 329 HOH HOH A . F 4 HOH 27 427 330 HOH HOH A . F 4 HOH 28 428 331 HOH HOH A . F 4 HOH 29 429 332 HOH HOH A . F 4 HOH 30 430 333 HOH HOH A . F 4 HOH 31 431 334 HOH HOH A . F 4 HOH 32 432 335 HOH HOH A . F 4 HOH 33 433 336 HOH HOH A . F 4 HOH 34 434 337 HOH HOH A . F 4 HOH 35 435 338 HOH HOH A . F 4 HOH 36 436 339 HOH HOH A . F 4 HOH 37 437 340 HOH HOH A . F 4 HOH 38 438 341 HOH HOH A . F 4 HOH 39 439 342 HOH HOH A . F 4 HOH 40 440 343 HOH HOH A . F 4 HOH 41 441 344 HOH HOH A . F 4 HOH 42 442 345 HOH HOH A . F 4 HOH 43 443 346 HOH HOH A . F 4 HOH 44 444 347 HOH HOH A . F 4 HOH 45 445 348 HOH HOH A . F 4 HOH 46 446 349 HOH HOH A . F 4 HOH 47 447 350 HOH HOH A . F 4 HOH 48 448 351 HOH HOH A . F 4 HOH 49 449 352 HOH HOH A . F 4 HOH 50 450 353 HOH HOH A . F 4 HOH 51 451 354 HOH HOH A . F 4 HOH 52 452 355 HOH HOH A . F 4 HOH 53 453 356 HOH HOH A . F 4 HOH 54 454 357 HOH HOH A . F 4 HOH 55 455 358 HOH HOH A . F 4 HOH 56 456 359 HOH HOH A . F 4 HOH 57 457 360 HOH HOH A . F 4 HOH 58 458 361 HOH HOH A . F 4 HOH 59 459 362 HOH HOH A . F 4 HOH 60 460 363 HOH HOH A . F 4 HOH 61 461 364 HOH HOH A . F 4 HOH 62 462 365 HOH HOH A . F 4 HOH 63 463 366 HOH HOH A . F 4 HOH 64 464 367 HOH HOH A . F 4 HOH 65 465 368 HOH HOH A . F 4 HOH 66 466 369 HOH HOH A . F 4 HOH 67 467 370 HOH HOH A . F 4 HOH 68 468 371 HOH HOH A . F 4 HOH 69 469 372 HOH HOH A . F 4 HOH 70 470 373 HOH HOH A . F 4 HOH 71 471 374 HOH HOH A . F 4 HOH 72 472 375 HOH HOH A . F 4 HOH 73 473 376 HOH HOH A . F 4 HOH 74 474 377 HOH HOH A . F 4 HOH 75 475 378 HOH HOH A . F 4 HOH 76 476 379 HOH HOH A . F 4 HOH 77 477 380 HOH HOH A . F 4 HOH 78 478 381 HOH HOH A . F 4 HOH 79 479 382 HOH HOH A . F 4 HOH 80 480 383 HOH HOH A . F 4 HOH 81 481 384 HOH HOH A . F 4 HOH 82 482 385 HOH HOH A . F 4 HOH 83 483 386 HOH HOH A . F 4 HOH 84 484 387 HOH HOH A . F 4 HOH 85 485 388 HOH HOH A . F 4 HOH 86 486 389 HOH HOH A . F 4 HOH 87 487 390 HOH HOH A . F 4 HOH 88 488 391 HOH HOH A . F 4 HOH 89 489 392 HOH HOH A . F 4 HOH 90 490 393 HOH HOH A . F 4 HOH 91 491 394 HOH HOH A . F 4 HOH 92 492 395 HOH HOH A . F 4 HOH 93 493 396 HOH HOH A . F 4 HOH 94 494 397 HOH HOH A . F 4 HOH 95 495 398 HOH HOH A . F 4 HOH 96 496 399 HOH HOH A . F 4 HOH 97 497 400 HOH HOH A . F 4 HOH 98 498 401 HOH HOH A . F 4 HOH 99 499 402 HOH HOH A . F 4 HOH 100 500 403 HOH HOH A . F 4 HOH 101 501 404 HOH HOH A . F 4 HOH 102 502 405 HOH HOH A . F 4 HOH 103 503 406 HOH HOH A . F 4 HOH 104 504 407 HOH HOH A . F 4 HOH 105 505 408 HOH HOH A . F 4 HOH 106 506 409 HOH HOH A . F 4 HOH 107 507 410 HOH HOH A . F 4 HOH 108 508 411 HOH HOH A . F 4 HOH 109 509 412 HOH HOH A . F 4 HOH 110 510 413 HOH HOH A . F 4 HOH 111 511 414 HOH HOH A . F 4 HOH 112 512 415 HOH HOH A . F 4 HOH 113 513 416 HOH HOH A . F 4 HOH 114 514 417 HOH HOH A . F 4 HOH 115 515 418 HOH HOH A . F 4 HOH 116 516 419 HOH HOH A . F 4 HOH 117 517 420 HOH HOH A . F 4 HOH 118 518 421 HOH HOH A . F 4 HOH 119 519 422 HOH HOH A . F 4 HOH 120 520 423 HOH HOH A . F 4 HOH 121 521 424 HOH HOH A . F 4 HOH 122 522 425 HOH HOH A . F 4 HOH 123 523 426 HOH HOH A . F 4 HOH 124 524 427 HOH HOH A . F 4 HOH 125 525 428 HOH HOH A . F 4 HOH 126 526 429 HOH HOH A . F 4 HOH 127 527 430 HOH HOH A . F 4 HOH 128 528 431 HOH HOH A . F 4 HOH 129 529 432 HOH HOH A . F 4 HOH 130 530 433 HOH HOH A . F 4 HOH 131 531 434 HOH HOH A . F 4 HOH 132 532 435 HOH HOH A . F 4 HOH 133 533 436 HOH HOH A . F 4 HOH 134 534 437 HOH HOH A . F 4 HOH 135 535 438 HOH HOH A . F 4 HOH 136 536 439 HOH HOH A . F 4 HOH 137 537 440 HOH HOH A . F 4 HOH 138 538 441 HOH HOH A . F 4 HOH 139 539 442 HOH HOH A . F 4 HOH 140 540 443 HOH HOH A . F 4 HOH 141 541 444 HOH HOH A . F 4 HOH 142 542 445 HOH HOH A . F 4 HOH 143 543 446 HOH HOH A . F 4 HOH 144 544 447 HOH HOH A . F 4 HOH 145 545 448 HOH HOH A . F 4 HOH 146 546 449 HOH HOH A . F 4 HOH 147 547 450 HOH HOH A . F 4 HOH 148 548 451 HOH HOH A . F 4 HOH 149 549 452 HOH HOH A . F 4 HOH 150 550 453 HOH HOH A . F 4 HOH 151 551 454 HOH HOH A . F 4 HOH 152 552 455 HOH HOH A . F 4 HOH 153 553 456 HOH HOH A . F 4 HOH 154 554 457 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 14 A MSE 37 ? MET SELENOMETHIONINE 2 A MSE 16 A MSE 39 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 535 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-18 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' database_2 3 3 'Structure model' struct_conn 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 16.1157 _pdbx_refine_tls.origin_y 37.3778 _pdbx_refine_tls.origin_z 37.3935 _pdbx_refine_tls.T[1][1] 0.2627 _pdbx_refine_tls.T[2][2] 0.2262 _pdbx_refine_tls.T[3][3] 0.2316 _pdbx_refine_tls.T[1][2] 0.0051 _pdbx_refine_tls.T[1][3] 0.0313 _pdbx_refine_tls.T[2][3] -0.0008 _pdbx_refine_tls.L[1][1] 0.0729 _pdbx_refine_tls.L[2][2] 0.6194 _pdbx_refine_tls.L[3][3] 1.6865 _pdbx_refine_tls.L[1][2] -0.1657 _pdbx_refine_tls.L[1][3] 0.2717 _pdbx_refine_tls.L[2][3] 0.9582 _pdbx_refine_tls.S[1][1] -0.0608 _pdbx_refine_tls.S[2][2] -0.0620 _pdbx_refine_tls.S[3][3] -0.0179 _pdbx_refine_tls.S[1][2] 0.0301 _pdbx_refine_tls.S[1][3] 0.0402 _pdbx_refine_tls.S[2][3] 0.0894 _pdbx_refine_tls.S[2][1] 0.1291 _pdbx_refine_tls.S[3][1] 0.5374 _pdbx_refine_tls.S[3][2] 0.0357 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 280 _pdbx_refine_tls_group.selection_details 'chain A' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'March 15, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 PHENIX 1.8.2 ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 4Q5T _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 25-280 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 525 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 526 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 86 ? ? -158.32 -10.94 2 1 THR A 109 ? ? -121.11 -89.01 3 1 HIS A 260 ? ? -90.11 53.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 56 ? CG ? A LYS 33 CG 2 1 Y 1 A LYS 56 ? CD ? A LYS 33 CD 3 1 Y 1 A LYS 56 ? CE ? A LYS 33 CE 4 1 Y 1 A LYS 56 ? NZ ? A LYS 33 NZ 5 1 Y 1 A LYS 97 ? CD ? A LYS 74 CD 6 1 Y 1 A LYS 97 ? CE ? A LYS 74 CE 7 1 Y 1 A LYS 97 ? NZ ? A LYS 74 NZ 8 1 Y 1 A LYS 100 ? CG ? A LYS 77 CG 9 1 Y 1 A LYS 100 ? CD ? A LYS 77 CD 10 1 Y 1 A LYS 100 ? CE ? A LYS 77 CE 11 1 Y 1 A LYS 100 ? NZ ? A LYS 77 NZ 12 1 Y 1 A ASP 168 ? CG ? A ASP 145 CG 13 1 Y 1 A ASP 168 ? OD1 ? A ASP 145 OD1 14 1 Y 1 A ASP 168 ? OD2 ? A ASP 145 OD2 15 1 Y 1 A GLU 228 ? CG ? A GLU 205 CG 16 1 Y 1 A GLU 228 ? CD ? A GLU 205 CD 17 1 Y 1 A GLU 228 ? OE1 ? A GLU 205 OE1 18 1 Y 1 A GLU 228 ? OE2 ? A GLU 205 OE2 19 1 N 1 A 2PE 301 ? C17 ? C 2PE 1 C17 20 1 N 1 A 2PE 301 ? C18 ? C 2PE 1 C18 21 1 N 1 A 2PE 301 ? O19 ? C 2PE 1 O19 22 1 N 1 A 2PE 301 ? C20 ? C 2PE 1 C20 23 1 N 1 A 2PE 301 ? C21 ? C 2PE 1 C21 24 1 N 1 A 2PE 301 ? O22 ? C 2PE 1 O22 25 1 N 1 A 2PE 301 ? C23 ? C 2PE 1 C23 26 1 N 1 A 2PE 301 ? C24 ? C 2PE 1 C24 27 1 N 1 A 2PE 301 ? O25 ? C 2PE 1 O25 28 1 N 1 A 2PE 301 ? C26 ? C 2PE 1 C26 29 1 N 1 A 2PE 301 ? C27 ? C 2PE 1 C27 30 1 N 1 A 2PE 301 ? O28 ? C 2PE 1 O28 31 1 N 1 A 2PE 302 ? C15 ? D 2PE 1 C15 32 1 N 1 A 2PE 302 ? O16 ? D 2PE 1 O16 33 1 N 1 A 2PE 302 ? C17 ? D 2PE 1 C17 34 1 N 1 A 2PE 302 ? C18 ? D 2PE 1 C18 35 1 N 1 A 2PE 302 ? O19 ? D 2PE 1 O19 36 1 N 1 A 2PE 302 ? C20 ? D 2PE 1 C20 37 1 N 1 A 2PE 302 ? C21 ? D 2PE 1 C21 38 1 N 1 A 2PE 302 ? O22 ? D 2PE 1 O22 39 1 N 1 A 2PE 302 ? C23 ? D 2PE 1 C23 40 1 N 1 A 2PE 302 ? C24 ? D 2PE 1 C24 41 1 N 1 A 2PE 302 ? O25 ? D 2PE 1 O25 42 1 N 1 A 2PE 302 ? C26 ? D 2PE 1 C26 43 1 N 1 A 2PE 302 ? C27 ? D 2PE 1 C27 44 1 N 1 A 2PE 302 ? O28 ? D 2PE 1 O28 45 1 N 1 A 2PE 303 ? C11 ? E 2PE 1 C11 46 1 N 1 A 2PE 303 ? C12 ? E 2PE 1 C12 47 1 N 1 A 2PE 303 ? O13 ? E 2PE 1 O13 48 1 N 1 A 2PE 303 ? C14 ? E 2PE 1 C14 49 1 N 1 A 2PE 303 ? C15 ? E 2PE 1 C15 50 1 N 1 A 2PE 303 ? O16 ? E 2PE 1 O16 51 1 N 1 A 2PE 303 ? C17 ? E 2PE 1 C17 52 1 N 1 A 2PE 303 ? C18 ? E 2PE 1 C18 53 1 N 1 A 2PE 303 ? O19 ? E 2PE 1 O19 54 1 N 1 A 2PE 303 ? C20 ? E 2PE 1 C20 55 1 N 1 A 2PE 303 ? C21 ? E 2PE 1 C21 56 1 N 1 A 2PE 303 ? O22 ? E 2PE 1 O22 57 1 N 1 A 2PE 303 ? C23 ? E 2PE 1 C23 58 1 N 1 A 2PE 303 ? C24 ? E 2PE 1 C24 59 1 N 1 A 2PE 303 ? O25 ? E 2PE 1 O25 60 1 N 1 A 2PE 303 ? C26 ? E 2PE 1 C26 61 1 N 1 A 2PE 303 ? C27 ? E 2PE 1 C27 62 1 N 1 A 2PE 303 ? O28 ? E 2PE 1 O28 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 SELENOMETHIONINE MSE 3 'NONAETHYLENE GLYCOL' 2PE 4 water HOH #