data_4Q63 # _entry.id 4Q63 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4Q63 RCSB RCSB085650 WWPDB D_1000085650 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC108035 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4Q63 _pdbx_database_status.recvd_initial_deposition_date 2014-04-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, Y.' 1 'Evdokimova, E.' 2 'Savchenko, A.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal Structure of Legionella Uncharacterized Protein Lpg0364' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kim, Y.' 1 primary 'Evdokimova, E.' 2 primary 'Savchenko, A.' 3 primary 'Joachimiak, A.' 4 primary 'Midwest Center for Structural Genomics (MCSG)' 5 # _cell.entry_id 4Q63 _cell.length_a 82.117 _cell.length_b 82.117 _cell.length_c 38.689 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4Q63 _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein Lpg0364' 12352.824 1 ? ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 5 ? ? ? ? 3 non-polymer syn 'FORMIC ACID' 46.025 2 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 49 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)DERRKYFRLKNHGEINASLDNNSIEIVEISSNGAVVVKQKTDIPKEGVLKLQIHNFI(MSE)ELCYEVIRAED NNIVLHFTKEDETNKLFLVLKRLRDERKNKTGS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMDERRKYFRLKNHGEINASLDNNSIEIVEISSNGAVVVKQKTDIPKEGVLKLQIHNFIMELCYEVIRAEDNNIVLHFT KEDETNKLFLVLKRLRDERKNKTGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC108035 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 ASP n 1 5 GLU n 1 6 ARG n 1 7 ARG n 1 8 LYS n 1 9 TYR n 1 10 PHE n 1 11 ARG n 1 12 LEU n 1 13 LYS n 1 14 ASN n 1 15 HIS n 1 16 GLY n 1 17 GLU n 1 18 ILE n 1 19 ASN n 1 20 ALA n 1 21 SER n 1 22 LEU n 1 23 ASP n 1 24 ASN n 1 25 ASN n 1 26 SER n 1 27 ILE n 1 28 GLU n 1 29 ILE n 1 30 VAL n 1 31 GLU n 1 32 ILE n 1 33 SER n 1 34 SER n 1 35 ASN n 1 36 GLY n 1 37 ALA n 1 38 VAL n 1 39 VAL n 1 40 VAL n 1 41 LYS n 1 42 GLN n 1 43 LYS n 1 44 THR n 1 45 ASP n 1 46 ILE n 1 47 PRO n 1 48 LYS n 1 49 GLU n 1 50 GLY n 1 51 VAL n 1 52 LEU n 1 53 LYS n 1 54 LEU n 1 55 GLN n 1 56 ILE n 1 57 HIS n 1 58 ASN n 1 59 PHE n 1 60 ILE n 1 61 MSE n 1 62 GLU n 1 63 LEU n 1 64 CYS n 1 65 TYR n 1 66 GLU n 1 67 VAL n 1 68 ILE n 1 69 ARG n 1 70 ALA n 1 71 GLU n 1 72 ASP n 1 73 ASN n 1 74 ASN n 1 75 ILE n 1 76 VAL n 1 77 LEU n 1 78 HIS n 1 79 PHE n 1 80 THR n 1 81 LYS n 1 82 GLU n 1 83 ASP n 1 84 GLU n 1 85 THR n 1 86 ASN n 1 87 LYS n 1 88 LEU n 1 89 PHE n 1 90 LEU n 1 91 VAL n 1 92 LEU n 1 93 LYS n 1 94 ARG n 1 95 LEU n 1 96 ARG n 1 97 ASP n 1 98 GLU n 1 99 ARG n 1 100 LYS n 1 101 ASN n 1 102 LYS n 1 103 THR n 1 104 GLY n 1 105 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lpg0364 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Philadelphia 1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Legionella pneumophila subsp. pneumophila' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272624 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'p15Tv lic' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5ZYK8_LEGPH _struct_ref.pdbx_db_accession Q5ZYK8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDERRKYFRLKNHGEINASLDNNSIEIVEISSNGAVVVKQKTDIPKEGVLKLQIHNFIMELCYEVIRAEDNNIVLHFTKE DETNKLFLVLKRLRDERKNKT ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4Q63 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 103 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5ZYK8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 101 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 101 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4Q63 GLY A 1 ? UNP Q5ZYK8 ? ? 'EXPRESSION TAG' -1 1 1 4Q63 HIS A 2 ? UNP Q5ZYK8 ? ? 'EXPRESSION TAG' 0 2 1 4Q63 GLY A 104 ? UNP Q5ZYK8 ? ? 'EXPRESSION TAG' 102 3 1 4Q63 SER A 105 ? UNP Q5ZYK8 ? ? 'EXPRESSION TAG' 103 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4Q63 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.05 _exptl_crystal.density_percent_sol 59.65 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.05M Cd Chloride, 0.1M HEPES pH7.5, 15%PEG400, 11%Etylen Glycol, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-07-14 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 # _reflns.entry_id 4Q63 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.95 _reflns.number_obs 10988 _reflns.number_all 10988 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.098 _reflns.pdbx_netI_over_sigmaI 11.5 _reflns.B_iso_Wilson_estimate 36.2 _reflns.pdbx_redundancy 11.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 1.98 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.857 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 6.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 524 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4Q63 _refine.ls_number_reflns_obs 20849 _refine.ls_number_reflns_all 20849 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.158 _refine.ls_d_res_high 1.953 _refine.ls_percent_reflns_obs 98.47 _refine.ls_R_factor_obs 0.1850 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.221 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.82 _refine.ls_number_reflns_R_free 1004 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 54.2 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'number of reflections include Friedel pairs' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model mixed _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 23.92 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 763 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 828 _refine_hist.d_res_high 1.953 _refine_hist.d_res_low 28.158 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 817 ? 'X-RAY DIFFRACTION' f_angle_d 1.016 ? ? 1097 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.951 ? ? 315 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.081 ? ? 126 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 142 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.9525 2.0555 2753 0.2757 96.00 0.2302 . . 149 . . 2912 . 'X-RAY DIFFRACTION' . 2.0555 2.1842 2786 0.2386 97.00 0.3029 . . 149 . . 2935 . 'X-RAY DIFFRACTION' . 2.1842 2.3528 2844 0.2033 98.00 0.2620 . . 124 . . 2968 . 'X-RAY DIFFRACTION' . 2.3528 2.5894 2864 0.1895 99.00 0.2143 . . 160 . . 3024 . 'X-RAY DIFFRACTION' . 2.5894 2.9637 2849 0.1878 100.00 0.2178 . . 152 . . 3001 . 'X-RAY DIFFRACTION' . 2.9637 3.7326 2893 0.1789 100.00 0.2047 . . 130 . . 3020 . 'X-RAY DIFFRACTION' . 3.7326 28.1606 2856 0.1639 99.00 0.2151 . . 140 . . 2996 . 'X-RAY DIFFRACTION' # _struct.entry_id 4Q63 _struct.title 'Crystal Structure of Legionella Uncharacterized Protein Lpg0364' _struct.pdbx_descriptor 'Uncharacterized protein Lpg0364' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4Q63 _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, alpha-beta, beta-barrel, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 5 ? K N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 81 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 101 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 79 _struct_conf.end_auth_comp_id ASN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 99 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ILE 60 C ? ? ? 1_555 A MSE 61 N A ? A ILE 58 A MSE 59 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale ? ? A ILE 60 C ? ? ? 1_555 A MSE 61 N B ? A ILE 58 A MSE 59 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A MSE 61 C A ? ? 1_555 A GLU 62 N ? ? A MSE 59 A GLU 60 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 61 C B ? ? 1_555 A GLU 62 N ? ? A MSE 59 A GLU 60 1_555 ? ? ? ? ? ? ? 1.330 ? metalc1 metalc ? ? C CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 202 A HOH 325 1_555 ? ? ? ? ? ? ? 2.383 ? metalc2 metalc ? ? A HIS 57 ND1 ? ? ? 1_555 D CD . CD ? ? A HIS 55 A CD 203 1_555 ? ? ? ? ? ? ? 2.388 ? metalc3 metalc ? ? A GLU 62 OE1 ? ? ? 1_555 B CD . CD ? ? A GLU 60 A CD 201 1_555 ? ? ? ? ? ? ? 2.528 ? metalc4 metalc ? ? B CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 201 A HOH 329 1_555 ? ? ? ? ? ? ? 2.546 ? metalc5 metalc ? ? A GLU 66 OE2 ? ? ? 1_555 C CD . CD ? ? A GLU 64 A CD 202 1_555 ? ? ? ? ? ? ? 2.552 ? metalc6 metalc ? ? A GLU 62 OE2 ? ? ? 1_555 B CD . CD ? ? A GLU 60 A CD 201 1_555 ? ? ? ? ? ? ? 2.555 ? metalc7 metalc ? ? A GLU 98 OE2 ? ? ? 1_555 D CD . CD ? ? A GLU 96 A CD 203 1_555 ? ? ? ? ? ? ? 2.561 ? metalc8 metalc ? ? E CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 204 A HOH 324 1_555 ? ? ? ? ? ? ? 2.577 ? metalc9 metalc ? ? D CD . CD ? ? ? 1_555 G FMT . O1 ? ? A CD 203 A FMT 206 1_555 ? ? ? ? ? ? ? 2.579 ? metalc10 metalc ? ? A GLU 66 OE1 ? ? ? 1_555 C CD . CD ? ? A GLU 64 A CD 202 1_555 ? ? ? ? ? ? ? 2.594 ? metalc11 metalc ? ? E CD . CD ? ? ? 1_555 K HOH . O ? ? A CD 204 A HOH 344 1_555 ? ? ? ? ? ? ? 2.599 ? metalc12 metalc ? ? A ASP 72 OD1 ? ? ? 1_555 E CD . CD ? ? A ASP 70 A CD 204 1_555 ? ? ? ? ? ? ? 2.617 ? metalc13 metalc ? ? D CD . CD ? ? ? 1_555 G FMT . O2 ? ? A CD 203 A FMT 206 1_555 ? ? ? ? ? ? ? 2.649 ? metalc14 metalc ? ? A GLU 98 OE1 ? ? ? 1_555 D CD . CD ? ? A GLU 96 A CD 203 1_555 ? ? ? ? ? ? ? 2.651 ? metalc15 metalc ? ? A GLU 49 OE1 ? ? ? 1_555 F CD . CD ? ? A GLU 47 A CD 205 1_555 ? ? ? ? ? ? ? 2.660 ? metalc16 metalc ? ? E CD . CD ? ? ? 1_555 H FMT . O2 ? ? A CD 204 A FMT 207 1_555 ? ? ? ? ? ? ? 2.686 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 12 ? LYS A 13 ? LEU A 10 LYS A 11 A 2 ILE A 29 ? SER A 33 ? ILE A 27 SER A 31 A 3 GLY A 36 ? VAL A 40 ? GLY A 34 VAL A 38 A 4 ASN A 74 ? PHE A 79 ? ASN A 72 PHE A 77 A 5 PHE A 59 ? GLU A 71 ? PHE A 57 GLU A 69 A 6 GLU A 49 ? ILE A 56 ? GLU A 47 ILE A 54 A 7 ILE A 18 ? LEU A 22 ? ILE A 16 LEU A 20 A 8 ASN A 25 ? ILE A 27 ? ASN A 23 ILE A 25 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 12 ? N LEU A 10 O ILE A 32 ? O ILE A 30 A 2 3 N SER A 33 ? N SER A 31 O GLY A 36 ? O GLY A 34 A 3 4 N ALA A 37 ? N ALA A 35 O LEU A 77 ? O LEU A 75 A 4 5 O VAL A 76 ? O VAL A 74 N ARG A 69 ? N ARG A 67 A 5 6 O LEU A 63 ? O LEU A 61 N LEU A 52 ? N LEU A 50 A 6 7 O GLN A 55 ? O GLN A 53 N ASN A 19 ? N ASN A 17 A 7 8 N LEU A 22 ? N LEU A 20 O ASN A 25 ? O ASN A 23 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD A 201' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CD A 202' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CD A 203' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CD A 204' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CD A 205' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE FMT A 206' AC7 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE FMT A 207' AC8 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 208' AC9 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL A 209' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU A 62 ? GLU A 60 . ? 1_555 ? 2 AC1 5 HIS A 78 ? HIS A 76 . ? 2_664 ? 3 AC1 5 CL J . ? CL A 209 . ? 1_555 ? 4 AC1 5 HOH K . ? HOH A 327 . ? 1_555 ? 5 AC1 5 HOH K . ? HOH A 329 . ? 1_555 ? 6 AC2 4 CYS A 64 ? CYS A 62 . ? 3_565 ? 7 AC2 4 GLU A 66 ? GLU A 64 . ? 1_555 ? 8 AC2 4 GLU A 84 ? GLU A 82 . ? 3_565 ? 9 AC2 4 HOH K . ? HOH A 325 . ? 1_555 ? 10 AC3 4 GLU A 28 ? GLU A 26 . ? 4_564 ? 11 AC3 4 HIS A 57 ? HIS A 55 . ? 1_555 ? 12 AC3 4 GLU A 98 ? GLU A 96 . ? 1_555 ? 13 AC3 4 FMT G . ? FMT A 206 . ? 1_555 ? 14 AC4 6 HIS A 15 ? HIS A 13 . ? 4_565 ? 15 AC4 6 ASP A 72 ? ASP A 70 . ? 1_555 ? 16 AC4 6 ASN A 73 ? ASN A 71 . ? 1_555 ? 17 AC4 6 FMT H . ? FMT A 207 . ? 1_555 ? 18 AC4 6 HOH K . ? HOH A 324 . ? 1_555 ? 19 AC4 6 HOH K . ? HOH A 344 . ? 1_555 ? 20 AC5 3 GLU A 49 ? GLU A 47 . ? 1_555 ? 21 AC5 3 ASP A 83 ? ASP A 81 . ? 3_565 ? 22 AC5 3 HOH K . ? HOH A 340 . ? 1_555 ? 23 AC6 6 GLU A 28 ? GLU A 26 . ? 4_564 ? 24 AC6 6 PHE A 59 ? PHE A 57 . ? 1_555 ? 25 AC6 6 ARG A 94 ? ARG A 92 . ? 1_555 ? 26 AC6 6 GLU A 98 ? GLU A 96 . ? 1_555 ? 27 AC6 6 CD D . ? CD A 203 . ? 1_555 ? 28 AC6 6 HOH K . ? HOH A 330 . ? 1_555 ? 29 AC7 4 HIS A 15 ? HIS A 13 . ? 4_565 ? 30 AC7 4 ASP A 72 ? ASP A 70 . ? 1_555 ? 31 AC7 4 CD E . ? CD A 204 . ? 1_555 ? 32 AC7 4 HOH K . ? HOH A 343 . ? 1_555 ? 33 AC8 5 ASN A 19 ? ASN A 17 . ? 1_555 ? 34 AC8 5 ALA A 20 ? ALA A 18 . ? 1_555 ? 35 AC8 5 SER A 21 ? SER A 19 . ? 1_555 ? 36 AC8 5 LYS A 53 ? LYS A 51 . ? 1_555 ? 37 AC8 5 HOH K . ? HOH A 321 . ? 1_555 ? 38 AC9 3 ASN A 35 ? ASN A 33 . ? 2_664 ? 39 AC9 3 GLU A 62 ? GLU A 60 . ? 1_555 ? 40 AC9 3 CD B . ? CD A 201 . ? 1_555 ? # _database_PDB_matrix.entry_id 4Q63 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4Q63 _atom_sites.fract_transf_matrix[1][1] 0.012178 _atom_sites.fract_transf_matrix[1][2] 0.007031 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014062 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025847 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MSE 3 1 ? ? ? A . n A 1 4 ASP 4 2 ? ? ? A . n A 1 5 GLU 5 3 ? ? ? A . n A 1 6 ARG 6 4 ? ? ? A . n A 1 7 ARG 7 5 ? ? ? A . n A 1 8 LYS 8 6 ? ? ? A . n A 1 9 TYR 9 7 7 TYR TYR A . n A 1 10 PHE 10 8 8 PHE PHE A . n A 1 11 ARG 11 9 9 ARG ARG A . n A 1 12 LEU 12 10 10 LEU LEU A . n A 1 13 LYS 13 11 11 LYS LYS A . n A 1 14 ASN 14 12 12 ASN ASN A . n A 1 15 HIS 15 13 13 HIS HIS A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 GLU 17 15 15 GLU GLU A . n A 1 18 ILE 18 16 16 ILE ILE A . n A 1 19 ASN 19 17 17 ASN ASN A . n A 1 20 ALA 20 18 18 ALA ALA A . n A 1 21 SER 21 19 19 SER SER A . n A 1 22 LEU 22 20 20 LEU LEU A . n A 1 23 ASP 23 21 21 ASP ASP A . n A 1 24 ASN 24 22 22 ASN ASN A . n A 1 25 ASN 25 23 23 ASN ASN A . n A 1 26 SER 26 24 24 SER SER A . n A 1 27 ILE 27 25 25 ILE ILE A . n A 1 28 GLU 28 26 26 GLU GLU A . n A 1 29 ILE 29 27 27 ILE ILE A . n A 1 30 VAL 30 28 28 VAL VAL A . n A 1 31 GLU 31 29 29 GLU GLU A . n A 1 32 ILE 32 30 30 ILE ILE A . n A 1 33 SER 33 31 31 SER SER A . n A 1 34 SER 34 32 32 SER SER A . n A 1 35 ASN 35 33 33 ASN ASN A . n A 1 36 GLY 36 34 34 GLY GLY A . n A 1 37 ALA 37 35 35 ALA ALA A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 VAL 39 37 37 VAL VAL A . n A 1 40 VAL 40 38 38 VAL VAL A . n A 1 41 LYS 41 39 39 LYS LYS A . n A 1 42 GLN 42 40 40 GLN GLN A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 THR 44 42 42 THR THR A . n A 1 45 ASP 45 43 43 ASP ASP A . n A 1 46 ILE 46 44 44 ILE ILE A . n A 1 47 PRO 47 45 45 PRO PRO A . n A 1 48 LYS 48 46 46 LYS LYS A . n A 1 49 GLU 49 47 47 GLU GLU A . n A 1 50 GLY 50 48 48 GLY GLY A . n A 1 51 VAL 51 49 49 VAL VAL A . n A 1 52 LEU 52 50 50 LEU LEU A . n A 1 53 LYS 53 51 51 LYS LYS A . n A 1 54 LEU 54 52 52 LEU LEU A . n A 1 55 GLN 55 53 53 GLN GLN A . n A 1 56 ILE 56 54 54 ILE ILE A . n A 1 57 HIS 57 55 55 HIS HIS A . n A 1 58 ASN 58 56 56 ASN ASN A . n A 1 59 PHE 59 57 57 PHE PHE A . n A 1 60 ILE 60 58 58 ILE ILE A . n A 1 61 MSE 61 59 59 MSE MSE A . n A 1 62 GLU 62 60 60 GLU GLU A . n A 1 63 LEU 63 61 61 LEU LEU A . n A 1 64 CYS 64 62 62 CYS CYS A . n A 1 65 TYR 65 63 63 TYR TYR A . n A 1 66 GLU 66 64 64 GLU GLU A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 ILE 68 66 66 ILE ILE A . n A 1 69 ARG 69 67 67 ARG ARG A . n A 1 70 ALA 70 68 68 ALA ALA A . n A 1 71 GLU 71 69 69 GLU GLU A . n A 1 72 ASP 72 70 70 ASP ASP A . n A 1 73 ASN 73 71 71 ASN ASN A . n A 1 74 ASN 74 72 72 ASN ASN A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 VAL 76 74 74 VAL VAL A . n A 1 77 LEU 77 75 75 LEU LEU A . n A 1 78 HIS 78 76 76 HIS HIS A . n A 1 79 PHE 79 77 77 PHE PHE A . n A 1 80 THR 80 78 78 THR THR A . n A 1 81 LYS 81 79 79 LYS LYS A . n A 1 82 GLU 82 80 80 GLU GLU A . n A 1 83 ASP 83 81 81 ASP ASP A . n A 1 84 GLU 84 82 82 GLU GLU A . n A 1 85 THR 85 83 83 THR THR A . n A 1 86 ASN 86 84 84 ASN ASN A . n A 1 87 LYS 87 85 85 LYS LYS A . n A 1 88 LEU 88 86 86 LEU LEU A . n A 1 89 PHE 89 87 87 PHE PHE A . n A 1 90 LEU 90 88 88 LEU LEU A . n A 1 91 VAL 91 89 89 VAL VAL A . n A 1 92 LEU 92 90 90 LEU LEU A . n A 1 93 LYS 93 91 91 LYS LYS A . n A 1 94 ARG 94 92 92 ARG ARG A . n A 1 95 LEU 95 93 93 LEU LEU A . n A 1 96 ARG 96 94 94 ARG ARG A . n A 1 97 ASP 97 95 95 ASP ASP A . n A 1 98 GLU 98 96 96 GLU GLU A . n A 1 99 ARG 99 97 97 ARG ARG A . n A 1 100 LYS 100 98 98 LYS LYS A . n A 1 101 ASN 101 99 99 ASN ASN A . n A 1 102 LYS 102 100 ? ? ? A . n A 1 103 THR 103 101 ? ? ? A . n A 1 104 GLY 104 102 ? ? ? A . n A 1 105 SER 105 103 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 61 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 59 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? K HOH . ? A HOH 325 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 OE2 ? A GLU 66 ? A GLU 64 ? 1_555 80.7 ? 2 O ? K HOH . ? A HOH 325 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 OE1 ? A GLU 66 ? A GLU 64 ? 1_555 118.5 ? 3 OE2 ? A GLU 66 ? A GLU 64 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 OE1 ? A GLU 66 ? A GLU 64 ? 1_555 50.6 ? 4 ND1 ? A HIS 57 ? A HIS 55 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 OE2 ? A GLU 98 ? A GLU 96 ? 1_555 98.3 ? 5 ND1 ? A HIS 57 ? A HIS 55 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 O1 ? G FMT . ? A FMT 206 ? 1_555 102.8 ? 6 OE2 ? A GLU 98 ? A GLU 96 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 O1 ? G FMT . ? A FMT 206 ? 1_555 87.7 ? 7 ND1 ? A HIS 57 ? A HIS 55 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 O2 ? G FMT . ? A FMT 206 ? 1_555 106.6 ? 8 OE2 ? A GLU 98 ? A GLU 96 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 O2 ? G FMT . ? A FMT 206 ? 1_555 133.2 ? 9 O1 ? G FMT . ? A FMT 206 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 O2 ? G FMT . ? A FMT 206 ? 1_555 48.8 ? 10 ND1 ? A HIS 57 ? A HIS 55 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 OE1 ? A GLU 98 ? A GLU 96 ? 1_555 146.1 ? 11 OE2 ? A GLU 98 ? A GLU 96 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 OE1 ? A GLU 98 ? A GLU 96 ? 1_555 50.0 ? 12 O1 ? G FMT . ? A FMT 206 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 OE1 ? A GLU 98 ? A GLU 96 ? 1_555 89.2 ? 13 O2 ? G FMT . ? A FMT 206 ? 1_555 CD ? D CD . ? A CD 203 ? 1_555 OE1 ? A GLU 98 ? A GLU 96 ? 1_555 105.0 ? 14 OE1 ? A GLU 62 ? A GLU 60 ? 1_555 CD ? B CD . ? A CD 201 ? 1_555 O ? K HOH . ? A HOH 329 ? 1_555 169.2 ? 15 OE1 ? A GLU 62 ? A GLU 60 ? 1_555 CD ? B CD . ? A CD 201 ? 1_555 OE2 ? A GLU 62 ? A GLU 60 ? 1_555 51.3 ? 16 O ? K HOH . ? A HOH 329 ? 1_555 CD ? B CD . ? A CD 201 ? 1_555 OE2 ? A GLU 62 ? A GLU 60 ? 1_555 119.8 ? 17 O ? K HOH . ? A HOH 324 ? 1_555 CD ? E CD . ? A CD 204 ? 1_555 O ? K HOH . ? A HOH 344 ? 1_555 91.8 ? 18 O ? K HOH . ? A HOH 324 ? 1_555 CD ? E CD . ? A CD 204 ? 1_555 OD1 ? A ASP 72 ? A ASP 70 ? 1_555 109.9 ? 19 O ? K HOH . ? A HOH 344 ? 1_555 CD ? E CD . ? A CD 204 ? 1_555 OD1 ? A ASP 72 ? A ASP 70 ? 1_555 86.6 ? 20 O ? K HOH . ? A HOH 324 ? 1_555 CD ? E CD . ? A CD 204 ? 1_555 O2 ? H FMT . ? A FMT 207 ? 1_555 83.0 ? 21 O ? K HOH . ? A HOH 344 ? 1_555 CD ? E CD . ? A CD 204 ? 1_555 O2 ? H FMT . ? A FMT 207 ? 1_555 169.8 ? 22 OD1 ? A ASP 72 ? A ASP 70 ? 1_555 CD ? E CD . ? A CD 204 ? 1_555 O2 ? H FMT . ? A FMT 207 ? 1_555 87.0 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-05-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -18.6424 41.5347 -1.1458 0.3719 0.6256 0.3574 -0.1008 0.0974 -0.1691 6.8445 6.4936 5.6977 -1.0935 0.7664 -1.3109 0.3133 -1.2152 0.2563 0.1065 -0.0325 1.0485 -0.3959 -1.0186 -0.1475 'X-RAY DIFFRACTION' 2 ? refined -12.3114 38.5120 0.9757 0.3137 0.3511 0.3434 -0.1125 0.0585 -0.0196 4.1071 1.8220 10.1029 0.4979 2.9367 -3.1164 0.0213 -0.6508 -0.4568 -0.2242 -0.0296 0.0267 0.8472 -0.4427 0.0016 'X-RAY DIFFRACTION' 3 ? refined -2.7775 33.2716 6.1395 0.7322 0.6414 0.9460 -0.0284 -0.0920 0.2999 1.8133 2.7671 3.9900 2.2178 -2.7279 -3.3151 -0.0424 -1.8925 -2.7444 0.4470 -0.5070 -1.7425 1.2818 0.0983 0.3489 'X-RAY DIFFRACTION' 4 ? refined -9.6267 41.5442 -4.5756 0.2234 0.3933 0.2057 -0.0397 0.0447 -0.0241 7.1871 4.4289 5.0307 1.6333 4.0606 1.3432 0.1064 0.5442 -0.1632 0.0186 -0.1017 0.2432 0.4346 -0.2834 -0.0171 'X-RAY DIFFRACTION' 5 ? refined -16.0995 46.7538 -3.9454 0.2931 0.2691 0.2560 0.0084 -0.0292 -0.0813 8.7890 7.0288 7.8304 2.3096 1.3384 -0.5964 -0.0921 0.1086 0.3349 -0.2975 -0.1369 0.7796 -0.3102 -0.8155 0.2597 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 7 through 20 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 21 through 38 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 39 through 46 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 47 through 69 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 70 through 99 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 'data collection' . ? 2 HKL-3000 phasing . ? 3 SHELXD phasing . ? 4 MLPHARE phasing . ? 5 DM 'model building' . ? 6 RESOLVE 'model building' . ? 7 Coot 'model building' . ? 8 PHENIX refinement '(phenix.refine: 1.8.1_1161)' ? 9 HKL-3000 'data reduction' . ? 10 HKL-3000 'data scaling' . ? 11 DM phasing . ? 12 RESOLVE phasing . ? 13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 55 ? ? 52.78 -118.80 2 1 ASP A 70 ? ? 41.39 -110.95 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 1 Y 1 A MSE 1 ? A MSE 3 4 1 Y 1 A ASP 2 ? A ASP 4 5 1 Y 1 A GLU 3 ? A GLU 5 6 1 Y 1 A ARG 4 ? A ARG 6 7 1 Y 1 A ARG 5 ? A ARG 7 8 1 Y 1 A LYS 6 ? A LYS 8 9 1 Y 1 A LYS 100 ? A LYS 102 10 1 Y 1 A THR 101 ? A THR 103 11 1 Y 1 A GLY 102 ? A GLY 104 12 1 Y 1 A SER 103 ? A SER 105 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 'FORMIC ACID' FMT 4 1,2-ETHANEDIOL EDO 5 'CHLORIDE ION' CL 6 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD 1 201 121 CD ZCD A . C 2 CD 1 202 122 CD ZCD A . D 2 CD 1 203 123 CD ZCD A . E 2 CD 1 204 124 CD ZCD A . F 2 CD 1 205 125 CD ZCD A . G 3 FMT 1 206 126 FMT FMT A . H 3 FMT 1 207 127 FMT FMT A . I 4 EDO 1 208 128 EDO EDO A . J 5 CL 1 209 129 CL CL A . K 6 HOH 1 301 1 HOH HOH A . K 6 HOH 2 302 2 HOH HOH A . K 6 HOH 3 303 3 HOH HOH A . K 6 HOH 4 304 4 HOH HOH A . K 6 HOH 5 305 5 HOH HOH A . K 6 HOH 6 306 6 HOH HOH A . K 6 HOH 7 307 7 HOH HOH A . K 6 HOH 8 308 8 HOH HOH A . K 6 HOH 9 309 9 HOH HOH A . K 6 HOH 10 310 10 HOH HOH A . K 6 HOH 11 311 11 HOH HOH A . K 6 HOH 12 312 12 HOH HOH A . K 6 HOH 13 313 13 HOH HOH A . K 6 HOH 14 314 14 HOH HOH A . K 6 HOH 15 315 15 HOH HOH A . K 6 HOH 16 316 16 HOH HOH A . K 6 HOH 17 317 17 HOH HOH A . K 6 HOH 18 318 18 HOH HOH A . K 6 HOH 19 319 19 HOH HOH A . K 6 HOH 20 320 20 HOH HOH A . K 6 HOH 21 321 21 HOH HOH A . K 6 HOH 22 322 22 HOH HOH A . K 6 HOH 23 323 23 HOH HOH A . K 6 HOH 24 324 24 HOH HOH A . K 6 HOH 25 325 25 HOH HOH A . K 6 HOH 26 326 26 HOH HOH A . K 6 HOH 27 327 27 HOH HOH A . K 6 HOH 28 328 28 HOH HOH A . K 6 HOH 29 329 29 HOH HOH A . K 6 HOH 30 330 30 HOH HOH A . K 6 HOH 31 331 31 HOH HOH A . K 6 HOH 32 332 32 HOH HOH A . K 6 HOH 33 333 33 HOH HOH A . K 6 HOH 34 334 34 HOH HOH A . K 6 HOH 35 335 35 HOH HOH A . K 6 HOH 36 336 36 HOH HOH A . K 6 HOH 37 337 37 HOH HOH A . K 6 HOH 38 338 38 HOH HOH A . K 6 HOH 39 339 39 HOH HOH A . K 6 HOH 40 340 40 HOH HOH A . K 6 HOH 41 341 41 HOH HOH A . K 6 HOH 42 342 42 HOH HOH A . K 6 HOH 43 343 43 HOH HOH A . K 6 HOH 44 344 44 HOH HOH A . K 6 HOH 45 345 45 HOH HOH A . K 6 HOH 46 346 46 HOH HOH A . K 6 HOH 47 347 47 HOH HOH A . K 6 HOH 48 348 48 HOH HOH A . K 6 HOH 49 349 49 HOH HOH A . #