HEADER HYDROLASE/HYDROLASE INHIBITOR 25-APR-14 4Q7Z TITLE NEUTROPHIL SERINE PROTEASE 4 (PRSS57) WITH PHE-PHE-ARG- TITLE 2 CHLOROMETHYLKETONE (FFR-CMK) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE 57; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SERINE PROTEASE 1-LIKE PROTEIN 1; COMPND 5 EC: 3.4.21.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRSS57, PRSSL1, UNQ782/PRO1599; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS TRYPSIN HOMOLOGY, PEPTIDASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.EIGENBROT,S.J.LIN,K.C.DONG REVDAT 5 20-SEP-23 4Q7Z 1 HETSYN REVDAT 4 29-JUL-20 4Q7Z 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 22-NOV-17 4Q7Z 1 REMARK REVDAT 2 17-SEP-14 4Q7Z 1 JRNL REVDAT 1 03-SEP-14 4Q7Z 0 JRNL AUTH S.J.LIN,K.C.DONG,C.EIGENBROT,M.VAN LOOKEREN CAMPAGNE, JRNL AUTH 2 D.KIRCHHOFER JRNL TITL STRUCTURES OF NEUTROPHIL SERINE PROTEASE 4 REVEAL AN UNUSUAL JRNL TITL 2 MECHANISM OF SUBSTRATE RECOGNITION BY A TRYPSIN-FOLD JRNL TITL 3 PROTEASE. JRNL REF STRUCTURE V. 22 1333 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25156428 JRNL DOI 10.1016/J.STR.2014.07.008 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 43254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2276 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.48 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6072 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.3230 REMARK 3 BIN FREE R VALUE SET COUNT : 334 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1781 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 79 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : -0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.081 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1954 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1330 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2664 ; 1.304 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3170 ; 0.868 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 240 ; 5.800 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;25.056 ;20.370 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 280 ;12.696 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;16.136 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 294 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2169 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 437 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 16 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7268 6.8894 8.4884 REMARK 3 T TENSOR REMARK 3 T11: 0.0276 T22: 0.0161 REMARK 3 T33: 0.0345 T12: -0.0001 REMARK 3 T13: 0.0059 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.2321 L22: 0.2202 REMARK 3 L33: 0.4741 L12: 0.0290 REMARK 3 L13: 0.0167 L23: 0.0254 REMARK 3 S TENSOR REMARK 3 S11: -0.0096 S12: 0.0145 S13: 0.0164 REMARK 3 S21: -0.0103 S22: -0.0325 S23: -0.0511 REMARK 3 S31: -0.0329 S32: -0.0023 S33: 0.0421 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 110 REMARK 3 ORIGIN FOR THE GROUP (A): -5.0930 -1.3887 12.1689 REMARK 3 T TENSOR REMARK 3 T11: 0.0224 T22: 0.0201 REMARK 3 T33: 0.0433 T12: -0.0053 REMARK 3 T13: 0.0072 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 0.2458 L22: 0.2892 REMARK 3 L33: 0.4099 L12: -0.1062 REMARK 3 L13: 0.1355 L23: -0.0318 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.0113 S13: -0.0073 REMARK 3 S21: 0.0234 S22: -0.0539 S23: -0.0642 REMARK 3 S31: 0.0342 S32: 0.0376 S33: 0.0474 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): -20.8268 -7.0729 20.9746 REMARK 3 T TENSOR REMARK 3 T11: 0.0687 T22: 0.0647 REMARK 3 T33: 0.0206 T12: -0.0598 REMARK 3 T13: 0.0194 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.0275 L22: 0.2780 REMARK 3 L33: 1.4694 L12: 0.3494 REMARK 3 L13: 0.0753 L23: 0.5080 REMARK 3 S TENSOR REMARK 3 S11: 0.0593 S12: -0.0786 S13: -0.0961 REMARK 3 S21: 0.0970 S22: -0.1128 S23: -0.0167 REMARK 3 S31: 0.2515 S32: -0.2934 S33: 0.0535 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 233 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7200 -4.7757 9.0689 REMARK 3 T TENSOR REMARK 3 T11: 0.0324 T22: 0.0460 REMARK 3 T33: 0.0369 T12: -0.0225 REMARK 3 T13: -0.0014 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 0.1379 L22: 0.1291 REMARK 3 L33: 0.6309 L12: 0.1060 REMARK 3 L13: -0.0046 L23: -0.0127 REMARK 3 S TENSOR REMARK 3 S11: -0.0370 S12: -0.0157 S13: 0.0072 REMARK 3 S21: -0.0134 S22: -0.0154 S23: -0.0332 REMARK 3 S31: 0.0885 S32: -0.1644 S33: 0.0524 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4Q7Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085718. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.127092 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45530 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 46.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 34.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MR BUMP REMARK 200 STARTING MODEL: 1HNE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG-MME 2000, 0.1 M TRIS 8.5, 0.2 REMARK 280 M TRIMETHYLAMINE N-OXIDE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K, PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.49300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.19150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.23300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.19150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.49300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.23300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 247 REMARK 465 GLN A 248 REMARK 465 PRO A 249 REMARK 465 GLY A 250 REMARK 465 PRO A 251 REMARK 465 LEU A 252 REMARK 465 PRO A 253 REMARK 465 GLY A 254 REMARK 465 THR A 255 REMARK 465 THR A 256 REMARK 465 ARG A 257 REMARK 465 PRO A 258 REMARK 465 PRO A 259 REMARK 465 GLY A 260 REMARK 465 GLU A 261 REMARK 465 ALA A 262 REMARK 465 ALA A 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A 124A O HOH A 526 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 71 -61.96 -122.06 REMARK 500 MET A 97 8.19 54.06 REMARK 500 ASP A 186A -159.39 -139.60 REMARK 500 SER A 214 -68.21 -123.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 630 REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE INHIBITOR REMARK 630 MOLECULE NAME: L-PHENYLALANYL-N-[(2S,3S)-6-CARBAMIMIDAMIDO-1- REMARK 630 CHLORO-2-HYDROXYHEXAN-3-YL]-L-PHENYLALANINAMIDE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 2YT A 304 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: PHE PHE AR7 0QE REMARK 630 DETAILS: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Q7X RELATED DB: PDB REMARK 900 RELATED ID: 4Q7Y RELATED DB: PDB REMARK 900 RELATED ID: 4Q80 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 NATURAL VARIANT DESCRIBED IN THE UNIPROT ENTRY Q6UWY2 DBREF 4Q7Z A 16 263 UNP Q6UWY2 PRS57_HUMAN 34 283 SEQADV 4Q7Z LEU A 123 UNP Q6UWY2 PRO 143 SEE REMARK 999 SEQRES 1 A 250 ILE ILE GLY GLY HIS GLU VAL THR PRO HIS SER ARG PRO SEQRES 2 A 250 TYR MET ALA SER VAL ARG PHE GLY GLY GLN HIS HIS CYS SEQRES 3 A 250 GLY GLY PHE LEU LEU ARG ALA ARG TRP VAL VAL SER ALA SEQRES 4 A 250 ALA HIS CYS PHE SER HIS ARG ASP LEU ARG THR GLY LEU SEQRES 5 A 250 VAL VAL LEU GLY ALA HIS VAL LEU SER THR ALA GLU PRO SEQRES 6 A 250 THR GLN GLN VAL PHE GLY ILE ASP ALA LEU THR THR HIS SEQRES 7 A 250 PRO ASP TYR HIS PRO MET THR HIS ALA ASN ASP ILE CYS SEQRES 8 A 250 LEU LEU ARG LEU ASN GLY SER ALA VAL LEU GLY PRO ALA SEQRES 9 A 250 VAL GLY LEU LEU ARG LEU PRO GLY ARG ARG ALA ARG PRO SEQRES 10 A 250 PRO THR ALA GLY THR ARG CYS ARG VAL ALA GLY TRP GLY SEQRES 11 A 250 PHE VAL SER ASP PHE GLU GLU LEU PRO PRO GLY LEU MET SEQRES 12 A 250 GLU ALA LYS VAL ARG VAL LEU ASP PRO ASP VAL CYS ASN SEQRES 13 A 250 SER SER TRP LYS GLY HIS LEU THR LEU THR MET LEU CYS SEQRES 14 A 250 THR ARG SER GLY ASP SER HIS ARG ARG GLY PHE CYS SER SEQRES 15 A 250 ALA ASP SER GLY GLY PRO LEU VAL CYS ARG ASN ARG ALA SEQRES 16 A 250 HIS GLY LEU VAL SER PHE SER GLY LEU TRP CYS GLY ASP SEQRES 17 A 250 PRO LYS THR PRO ASP VAL TYR THR GLN VAL SER ALA PHE SEQRES 18 A 250 VAL ALA TRP ILE TRP ASP VAL VAL ARG ARG SER SER PRO SEQRES 19 A 250 GLN PRO GLY PRO LEU PRO GLY THR THR ARG PRO PRO GLY SEQRES 20 A 250 GLU ALA ALA MODRES 4Q7Z ASN A 169 ASN GLYCOSYLATION SITE MODRES 4Q7Z ASN A 109 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET FUC B 2 10 HET NAG A 301 14 HET 2YT A 304 34 HET GOL A 305 6 HET CL A 306 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM 2YT L-PHENYLALANYL-N-[(2S,3S)-6-CARBAMIMIDAMIDO-1-CHLORO-2- HETNAM 2 2YT HYDROXYHEXAN-3-YL]-L-PHENYLALANINAMIDE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN 2YT PHE-PHE-ARG-CHLOROMETHYLKETONE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 FUC C6 H12 O5 FORMUL 4 2YT C25 H35 CL N6 O3 FORMUL 5 GOL C3 H8 O3 FORMUL 6 CL CL 1- FORMUL 7 HOH *246(H2 O) HELIX 1 1 ALA A 55 SER A 60 5 6 HELIX 2 2 ASP A 62A ARG A 62C 5 3 HELIX 3 3 ASP A 164 TRP A 172 1 9 HELIX 4 4 PHE A 234 SER A 245 1 12 SHEET 1 A 8 HIS A 20 GLU A 21 0 SHEET 2 A 8 MET A 156 LEU A 163 -1 O GLU A 157 N HIS A 20 SHEET 3 A 8 MET A 180 ARG A 184 -1 O ARG A 184 N ARG A 161 SHEET 4 A 8 VAL A 227 GLN A 230 -1 O TYR A 228 N LEU A 181 SHEET 5 A 8 ARG A 208 PHE A 215 -1 N PHE A 215 O VAL A 227 SHEET 6 A 8 PRO A 198 CYS A 201 -1 N LEU A 199 O GLY A 211 SHEET 7 A 8 ARG A 135 GLY A 140 -1 N ARG A 137 O VAL A 200 SHEET 8 A 8 MET A 156 LEU A 163 -1 O VAL A 160 N CYS A 136 SHEET 1 B 7 GLN A 81 PHE A 83 0 SHEET 2 B 7 GLY A 64 LEU A 68 -1 N LEU A 68 O GLN A 81 SHEET 3 B 7 MET A 30 PHE A 35 -1 N SER A 32 O VAL A 67 SHEET 4 B 7 GLN A 39 ARG A 48 -1 O CYS A 42 N VAL A 33 SHEET 5 B 7 TRP A 51 SER A 54 -1 O TRP A 51 N LEU A 47 SHEET 6 B 7 CYS A 104 LEU A 108 -1 O LEU A 106 N VAL A 52 SHEET 7 B 7 ILE A 85 THR A 90 -1 N ALA A 87 O ARG A 107 SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.03 SSBOND 2 CYS A 136 CYS A 201 1555 1555 2.03 SSBOND 3 CYS A 168 CYS A 182 1555 1555 2.01 SSBOND 4 CYS A 191 CYS A 220 1555 1555 2.07 LINK NE2 HIS A 57 C32 2YT A 304 1555 1555 1.51 LINK ND2 ASN A 109 C1 NAG A 301 1555 1555 1.45 LINK ND2 ASN A 169 C1 NAG B 1 1555 1555 1.43 LINK OG SER A 195 C30 2YT A 304 1555 1555 1.41 LINK O6 NAG B 1 C1 FUC B 2 1555 1555 1.44 CRYST1 54.986 64.466 68.383 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018186 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015512 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014624 0.00000