HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-APR-14 4Q88 TITLE GLYCOSYL HYDROLASE FAMILY 88 FROM BACTEROIDES VULGATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 18-373; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: ATCC 8482; SOURCE 5 GENE: BVU_1783; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,H.LI,M.ENDRES,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 2 22-NOV-17 4Q88 1 REMARK REVDAT 1 21-MAY-14 4Q88 0 JRNL AUTH J.OSIPIUK,H.LI,M.ENDRES,A.JOACHIMIAK JRNL TITL GLYCOSYL HYDROLASE FAMILY 88 FROM BACTEROIDES VULGATUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 3 NUMBER OF REFLECTIONS : 96837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.135 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4892 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3652 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 47.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 180 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5723 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 904 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.00000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : -0.21000 REMARK 3 B12 (A**2) : -1.08000 REMARK 3 B13 (A**2) : 0.48000 REMARK 3 B23 (A**2) : 0.50000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.054 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.392 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6098 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 5606 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8320 ; 1.616 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12937 ; 0.870 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 753 ; 5.714 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 306 ;35.112 ;24.183 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 960 ;11.532 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;18.702 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 860 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6969 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1501 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2848 ; 1.371 ; 1.882 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2847 ; 1.366 ; 1.882 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3571 ; 1.918 ; 2.814 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 373 REMARK 3 ORIGIN FOR THE GROUP (A): 9.7958 -17.6217 10.4218 REMARK 3 T TENSOR REMARK 3 T11: 0.0219 T22: 0.0040 REMARK 3 T33: 0.0284 T12: -0.0070 REMARK 3 T13: -0.0138 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.4259 L22: 0.4716 REMARK 3 L33: 0.3033 L12: 0.1472 REMARK 3 L13: -0.0462 L23: -0.1550 REMARK 3 S TENSOR REMARK 3 S11: 0.0251 S12: 0.0067 S13: -0.0268 REMARK 3 S21: -0.0040 S22: 0.0091 S23: -0.0529 REMARK 3 S31: 0.0724 S32: -0.0274 S33: -0.0342 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 25 B 372 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7902 17.7527 -9.9945 REMARK 3 T TENSOR REMARK 3 T11: 0.0225 T22: 0.0162 REMARK 3 T33: 0.0043 T12: -0.0011 REMARK 3 T13: 0.0084 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.4288 L22: 0.7465 REMARK 3 L33: 0.2391 L12: 0.2315 REMARK 3 L13: 0.0612 L23: 0.0269 REMARK 3 S TENSOR REMARK 3 S11: -0.0350 S12: 0.0356 S13: -0.0087 REMARK 3 S21: -0.1094 S22: 0.0620 S23: -0.0288 REMARK 3 S31: -0.0425 S32: -0.0439 S33: -0.0270 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4Q88 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085727. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96838 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 26.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD, SHELXD, MLPHARE, DM, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M HEPES REMARK 280 BUFFER, 25% PEG 3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 15 REMARK 465 ASN A 16 REMARK 465 ALA A 17 REMARK 465 SER A 18 REMARK 465 ASN A 19 REMARK 465 LYS A 20 REMARK 465 LYS A 21 REMARK 465 GLU A 22 REMARK 465 ASN A 23 REMARK 465 SER B 15 REMARK 465 ASN B 16 REMARK 465 ALA B 17 REMARK 465 SER B 18 REMARK 465 ASN B 19 REMARK 465 LYS B 20 REMARK 465 LYS B 21 REMARK 465 GLU B 22 REMARK 465 ASN B 23 REMARK 465 THR B 24 REMARK 465 GLN B 373 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 904 O HOH A 961 1.98 REMARK 500 O HOH B 698 O HOH B 795 2.07 REMARK 500 O HOH A 891 O HOH A 954 2.11 REMARK 500 O HOH A 661 O HOH A 944 2.14 REMARK 500 O HOH B 1028 O HOH B 1029 2.18 REMARK 500 O HOH B 886 O HOH B 929 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 368 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP B 54 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 108 43.68 -82.58 REMARK 500 ASP A 128 82.49 -155.68 REMARK 500 ASP A 130 119.36 -161.13 REMARK 500 ASP A 151 44.13 -96.48 REMARK 500 TRP A 153 69.45 -109.02 REMARK 500 TYR B 108 45.26 -84.51 REMARK 500 ASP B 128 83.27 -155.20 REMARK 500 ASP B 151 45.93 -98.64 REMARK 500 TRP B 153 71.29 -108.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC100051 RELATED DB: TARGETTRACK DBREF 4Q88 A 18 373 UNP A6L195 A6L195_BACV8 18 373 DBREF 4Q88 B 18 373 UNP A6L195 A6L195_BACV8 18 373 SEQADV 4Q88 SER A 15 UNP A6L195 EXPRESSION TAG SEQADV 4Q88 ASN A 16 UNP A6L195 EXPRESSION TAG SEQADV 4Q88 ALA A 17 UNP A6L195 EXPRESSION TAG SEQADV 4Q88 SER B 15 UNP A6L195 EXPRESSION TAG SEQADV 4Q88 ASN B 16 UNP A6L195 EXPRESSION TAG SEQADV 4Q88 ALA B 17 UNP A6L195 EXPRESSION TAG SEQRES 1 A 359 SER ASN ALA SER ASN LYS LYS GLU ASN THR GLU THR SER SEQRES 2 A 359 GLU GLU LEU LEU GLU ILE ILE HIS ARG VAL ASN GLN ARG SEQRES 3 A 359 TYR GLN SER MSE HIS LYS PRO GLN VAL ARG SER PHE TRP SEQRES 4 A 359 ASP ASN ALA VAL TYR HIS THR GLY ASN MSE GLU VAL CYS SEQRES 5 A 359 ALA LEU THR GLY ASN LYS ASP TYR LEU GLN TYR SER ILE SEQRES 6 A 359 ASP TRP ALA ASP TYR ASN GLN TRP LYS GLY ALA THR SER SEQRES 7 A 359 ASN ASN LYS ALA GLU TRP ARG SER THR TYR GLY GLU SER SEQRES 8 A 359 PRO GLU TYR VAL LEU PHE GLY ASP TRP GLN VAL CYS PHE SEQRES 9 A 359 GLN THR TYR ALA ASP LEU TYR LYS LEU ASP PRO ASP THR SEQRES 10 A 359 ILE LYS ILE ALA ARG ALA ARG GLU VAL MSE GLU TYR GLN SEQRES 11 A 359 MSE SER THR SER LYS LEU ASP TYR TRP HIS TRP VAL ASP SEQRES 12 A 359 ALA LEU TYR MSE VAL MSE PRO VAL MSE VAL LYS MSE TYR SEQRES 13 A 359 ASP ILE THR LYS ASN PRO LEU TYR LEU GLU LYS LEU HIS SEQRES 14 A 359 GLN TYR LEU THR VAL THR ASP SER ILE MSE TYR ASP ARG SEQRES 15 A 359 GLU VAL GLY LEU TYR TYR ARG ASP ALA LYS TYR PRO TYR SEQRES 16 A 359 PRO PHE HIS LYS THR ILE ASN GLY LYS LYS ASP PHE TRP SEQRES 17 A 359 SER ARG GLY ASP GLY TRP ALA PHE ALA ALA PHE ALA LYS SEQRES 18 A 359 VAL LEU LYS GLN LEU PRO ALA GLU ASP LYS TYR ARG GLU SEQRES 19 A 359 GLU TYR ILE THR ARG PHE GLN THR MSE ALA LYS SER ILE SEQRES 20 A 359 ALA ALA CYS GLN GLN PRO GLU GLY TYR TRP THR ARG SER SEQRES 21 A 359 LEU ILE ASP PRO GLU GLN ALA PRO GLY PRO GLU THR SER SEQRES 22 A 359 GLY THR ALA LEU PHE THR TYR GLY PHE LEU TRP GLY ILE SEQRES 23 A 359 ASN ASN GLY LEU LEU ASN ALA ASP ILE TYR SER PRO ILE SEQRES 24 A 359 VAL GLU LYS ALA TRP ASN TYR LEU LYS THR THR ALA LEU SEQRES 25 A 359 GLN ALA ASP GLY LYS ILE GLY TYR ILE GLN PRO VAL GLY SEQRES 26 A 359 GLU LYS ALA ILE PRO GLY GLN VAL VAL ASP ALA ASN SER SEQRES 27 A 359 CYS PHE ASN PHE GLY ILE GLY ALA PHE LEU LEU ALA ALA SEQRES 28 A 359 CYS GLU ARG VAL ARG PHE LEU GLN SEQRES 1 B 359 SER ASN ALA SER ASN LYS LYS GLU ASN THR GLU THR SER SEQRES 2 B 359 GLU GLU LEU LEU GLU ILE ILE HIS ARG VAL ASN GLN ARG SEQRES 3 B 359 TYR GLN SER MSE HIS LYS PRO GLN VAL ARG SER PHE TRP SEQRES 4 B 359 ASP ASN ALA VAL TYR HIS THR GLY ASN MSE GLU VAL CYS SEQRES 5 B 359 ALA LEU THR GLY ASN LYS ASP TYR LEU GLN TYR SER ILE SEQRES 6 B 359 ASP TRP ALA ASP TYR ASN GLN TRP LYS GLY ALA THR SER SEQRES 7 B 359 ASN ASN LYS ALA GLU TRP ARG SER THR TYR GLY GLU SER SEQRES 8 B 359 PRO GLU TYR VAL LEU PHE GLY ASP TRP GLN VAL CYS PHE SEQRES 9 B 359 GLN THR TYR ALA ASP LEU TYR LYS LEU ASP PRO ASP THR SEQRES 10 B 359 ILE LYS ILE ALA ARG ALA ARG GLU VAL MSE GLU TYR GLN SEQRES 11 B 359 MSE SER THR SER LYS LEU ASP TYR TRP HIS TRP VAL ASP SEQRES 12 B 359 ALA LEU TYR MSE VAL MSE PRO VAL MSE VAL LYS MSE TYR SEQRES 13 B 359 ASP ILE THR LYS ASN PRO LEU TYR LEU GLU LYS LEU HIS SEQRES 14 B 359 GLN TYR LEU THR VAL THR ASP SER ILE MSE TYR ASP ARG SEQRES 15 B 359 GLU VAL GLY LEU TYR TYR ARG ASP ALA LYS TYR PRO TYR SEQRES 16 B 359 PRO PHE HIS LYS THR ILE ASN GLY LYS LYS ASP PHE TRP SEQRES 17 B 359 SER ARG GLY ASP GLY TRP ALA PHE ALA ALA PHE ALA LYS SEQRES 18 B 359 VAL LEU LYS GLN LEU PRO ALA GLU ASP LYS TYR ARG GLU SEQRES 19 B 359 GLU TYR ILE THR ARG PHE GLN THR MSE ALA LYS SER ILE SEQRES 20 B 359 ALA ALA CYS GLN GLN PRO GLU GLY TYR TRP THR ARG SER SEQRES 21 B 359 LEU ILE ASP PRO GLU GLN ALA PRO GLY PRO GLU THR SER SEQRES 22 B 359 GLY THR ALA LEU PHE THR TYR GLY PHE LEU TRP GLY ILE SEQRES 23 B 359 ASN ASN GLY LEU LEU ASN ALA ASP ILE TYR SER PRO ILE SEQRES 24 B 359 VAL GLU LYS ALA TRP ASN TYR LEU LYS THR THR ALA LEU SEQRES 25 B 359 GLN ALA ASP GLY LYS ILE GLY TYR ILE GLN PRO VAL GLY SEQRES 26 B 359 GLU LYS ALA ILE PRO GLY GLN VAL VAL ASP ALA ASN SER SEQRES 27 B 359 CYS PHE ASN PHE GLY ILE GLY ALA PHE LEU LEU ALA ALA SEQRES 28 B 359 CYS GLU ARG VAL ARG PHE LEU GLN MODRES 4Q88 MSE A 44 MET SELENOMETHIONINE MODRES 4Q88 MSE A 63 MET SELENOMETHIONINE MODRES 4Q88 MSE A 141 MET SELENOMETHIONINE MODRES 4Q88 MSE A 145 MET SELENOMETHIONINE MODRES 4Q88 MSE A 161 MET SELENOMETHIONINE MODRES 4Q88 MSE A 163 MET SELENOMETHIONINE MODRES 4Q88 MSE A 166 MET SELENOMETHIONINE MODRES 4Q88 MSE A 169 MET SELENOMETHIONINE MODRES 4Q88 MSE A 193 MET SELENOMETHIONINE MODRES 4Q88 MSE A 257 MET SELENOMETHIONINE MODRES 4Q88 MSE B 44 MET SELENOMETHIONINE MODRES 4Q88 MSE B 63 MET SELENOMETHIONINE MODRES 4Q88 MSE B 141 MET SELENOMETHIONINE MODRES 4Q88 MSE B 145 MET SELENOMETHIONINE MODRES 4Q88 MSE B 161 MET SELENOMETHIONINE MODRES 4Q88 MSE B 163 MET SELENOMETHIONINE MODRES 4Q88 MSE B 166 MET SELENOMETHIONINE MODRES 4Q88 MSE B 169 MET SELENOMETHIONINE MODRES 4Q88 MSE B 193 MET SELENOMETHIONINE MODRES 4Q88 MSE B 257 MET SELENOMETHIONINE HET MSE A 44 13 HET MSE A 63 8 HET MSE A 141 8 HET MSE A 145 8 HET MSE A 161 8 HET MSE A 163 8 HET MSE A 166 8 HET MSE A 169 8 HET MSE A 193 8 HET MSE A 257 8 HET MSE B 44 13 HET MSE B 63 8 HET MSE B 141 8 HET MSE B 145 8 HET MSE B 161 8 HET MSE B 163 8 HET MSE B 166 8 HET MSE B 169 8 HET MSE B 193 8 HET MSE B 257 8 HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET SO4 B 501 5 HET SO4 B 502 5 HET SO4 B 503 5 HET EDO B 504 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 EDO 4(C2 H6 O2) FORMUL 6 SO4 3(O4 S 2-) FORMUL 10 HOH *904(H2 O) HELIX 1 1 THR A 26 HIS A 45 1 20 HELIX 2 2 PHE A 52 GLY A 70 1 19 HELIX 3 3 ASN A 71 ASN A 85 1 15 HELIX 4 4 ASN A 94 TRP A 98 5 5 HELIX 5 5 PHE A 111 GLN A 115 5 5 HELIX 6 6 VAL A 116 ASP A 128 1 13 HELIX 7 7 ASP A 130 THR A 147 1 18 HELIX 8 8 ASP A 157 LYS A 174 1 18 HELIX 9 9 PRO A 176 MSE A 193 1 18 HELIX 10 10 TRP A 222 LEU A 240 1 19 HELIX 11 11 TYR A 246 CYS A 264 1 19 HELIX 12 12 GLU A 285 ASN A 302 1 18 HELIX 13 13 ASN A 306 THR A 324 1 19 HELIX 14 14 PHE A 354 GLN A 373 1 20 HELIX 15 15 THR B 26 HIS B 45 1 20 HELIX 16 16 PHE B 52 GLY B 70 1 19 HELIX 17 17 ASN B 71 ASN B 85 1 15 HELIX 18 18 ASN B 94 TRP B 98 5 5 HELIX 19 19 PHE B 111 GLN B 115 5 5 HELIX 20 20 VAL B 116 ASP B 128 1 13 HELIX 21 21 ASP B 130 THR B 147 1 18 HELIX 22 22 ASP B 157 LYS B 174 1 18 HELIX 23 23 PRO B 176 TYR B 194 1 19 HELIX 24 24 TRP B 222 LEU B 240 1 19 HELIX 25 25 TYR B 246 CYS B 264 1 19 HELIX 26 26 GLU B 285 ASN B 302 1 18 HELIX 27 27 ASN B 306 THR B 324 1 19 HELIX 28 28 PHE B 354 LEU B 372 1 19 SHEET 1 A 2 TYR A 194 ASP A 195 0 SHEET 2 A 2 LEU A 200 TYR A 201 -1 O LEU A 200 N ASP A 195 LINK C SER A 43 N MSE A 44 1555 1555 1.33 LINK C MSE A 44 N HIS A 45 1555 1555 1.33 LINK C ASN A 62 N MSE A 63 1555 1555 1.34 LINK C MSE A 63 N GLU A 64 1555 1555 1.33 LINK C VAL A 140 N MSE A 141 1555 1555 1.33 LINK C MSE A 141 N GLU A 142 1555 1555 1.34 LINK C GLN A 144 N MSE A 145 1555 1555 1.32 LINK C MSE A 145 N SER A 146 1555 1555 1.36 LINK C TYR A 160 N MSE A 161 1555 1555 1.33 LINK C MSE A 161 N VAL A 162 1555 1555 1.31 LINK C VAL A 162 N MSE A 163 1555 1555 1.33 LINK C MSE A 163 N PRO A 164 1555 1555 1.34 LINK C VAL A 165 N MSE A 166 1555 1555 1.34 LINK C MSE A 166 N VAL A 167 1555 1555 1.35 LINK C LYS A 168 N MSE A 169 1555 1555 1.33 LINK C MSE A 169 N TYR A 170 1555 1555 1.33 LINK C ILE A 192 N MSE A 193 1555 1555 1.33 LINK C MSE A 193 N TYR A 194 1555 1555 1.34 LINK C THR A 256 N MSE A 257 1555 1555 1.35 LINK C MSE A 257 N ALA A 258 1555 1555 1.33 LINK C SER B 43 N MSE B 44 1555 1555 1.33 LINK C MSE B 44 N HIS B 45 1555 1555 1.34 LINK C ASN B 62 N MSE B 63 1555 1555 1.33 LINK C MSE B 63 N GLU B 64 1555 1555 1.32 LINK C VAL B 140 N MSE B 141 1555 1555 1.33 LINK C MSE B 141 N GLU B 142 1555 1555 1.35 LINK C GLN B 144 N MSE B 145 1555 1555 1.30 LINK C MSE B 145 N SER B 146 1555 1555 1.34 LINK C TYR B 160 N MSE B 161 1555 1555 1.34 LINK C MSE B 161 N VAL B 162 1555 1555 1.32 LINK C VAL B 162 N MSE B 163 1555 1555 1.34 LINK C MSE B 163 N PRO B 164 1555 1555 1.35 LINK C VAL B 165 N MSE B 166 1555 1555 1.33 LINK C MSE B 166 N VAL B 167 1555 1555 1.32 LINK C LYS B 168 N MSE B 169 1555 1555 1.32 LINK C MSE B 169 N TYR B 170 1555 1555 1.32 LINK C ILE B 192 N MSE B 193 1555 1555 1.33 LINK C MSE B 193 N TYR B 194 1555 1555 1.32 LINK C THR B 256 N MSE B 257 1555 1555 1.33 LINK C MSE B 257 N ALA B 258 1555 1555 1.34 CISPEP 1 TYR A 209 PRO A 210 0 2.32 CISPEP 2 TYR B 209 PRO B 210 0 6.69 SITE 1 AC1 2 GLY A 303 LEU A 304 SITE 1 AC2 4 ARG A 99 SER A 100 THR A 101 HOH A 913 SITE 1 AC3 5 THR A 147 SER A 148 LYS A 149 HOH A 768 SITE 2 AC3 5 LYS B 72 SITE 1 AC4 8 HOH A 733 TYR B 194 ARG B 196 THR B 252 SITE 2 AC4 8 ARG B 253 THR B 256 HOH B 829 HOH B1016 SITE 1 AC5 7 SER A 92 ASN A 93 ASN A 94 HOH A 650 SITE 2 AC5 7 LYS B 238 HOH B 891 HOH B1007 SITE 1 AC6 8 HOH A 637 SER B 92 ASN B 93 ASN B 94 SITE 2 AC6 8 HOH B 719 HOH B 803 HOH B 979 HOH B1036 SITE 1 AC7 5 LYS A 72 THR B 147 SER B 148 LYS B 149 SITE 2 AC7 5 HOH B 888 CRYST1 55.415 73.502 73.183 65.30 83.66 90.94 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018046 0.000295 -0.002349 0.00000 SCALE2 0.000000 0.013607 -0.006339 0.00000 SCALE3 0.000000 0.000000 0.015167 0.00000