HEADER HYDROLASE 30-APR-14 4Q9A TITLE CRYSTAL STRUCTURE OF A PUTATIVE GDSL-LIKE LIPASE (PARMER_00689) FROM TITLE 2 PARABACTEROIDES MERDAE ATCC 43184 AT 2.86 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAT PATHWAY SIGNAL SEQUENCE DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 29-256; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARABACTEROIDES MERDAE; SOURCE 3 ORGANISM_TAXID: 411477; SOURCE 4 ATCC: 43184; SOURCE 5 GENE: PARMER_00689; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS ACYLHYDROLASE FAMILY, PF13472, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 3 01-FEB-23 4Q9A 1 SEQADV LINK REVDAT 2 22-NOV-17 4Q9A 1 REMARK REVDAT 1 25-JUN-14 4Q9A 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE GDSL-LIKE LIPASE JRNL TITL 2 (PARMER_00689) FROM PARABACTEROIDES MERDAE ATCC 43184 AT JRNL TITL 3 2.86 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 14826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 751 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 7 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2995 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2285 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2824 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE : 0.2874 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.71 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 171 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3509 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.19790 REMARK 3 B22 (A**2) : 9.19790 REMARK 3 B33 (A**2) : -18.39590 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.364 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3593 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4872 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1644 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 98 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 515 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3593 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 455 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4106 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.11 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.08 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|38 - 256 } REMARK 3 ORIGIN FOR THE GROUP (A): 24.8020 47.3479 15.4288 REMARK 3 T TENSOR REMARK 3 T11: -0.1447 T22: -0.1459 REMARK 3 T33: 0.1705 T12: -0.0213 REMARK 3 T13: -0.0451 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.6275 L22: 1.6018 REMARK 3 L33: 1.4909 L12: -0.3713 REMARK 3 L13: 0.5890 L23: -0.3318 REMARK 3 S TENSOR REMARK 3 S11: 0.0584 S12: 0.1636 S13: -0.0625 REMARK 3 S21: -0.2192 S22: 0.0120 S23: 0.1815 REMARK 3 S31: 0.0775 S32: -0.1048 S33: -0.0704 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|39 - 256 } REMARK 3 ORIGIN FOR THE GROUP (A): 35.3211 73.0576 35.1408 REMARK 3 T TENSOR REMARK 3 T11: -0.1414 T22: -0.1288 REMARK 3 T33: 0.2009 T12: 0.0223 REMARK 3 T13: 0.0215 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.0377 L22: 0.9849 REMARK 3 L33: 1.4146 L12: 0.3634 REMARK 3 L13: 0.5773 L23: -0.0665 REMARK 3 S TENSOR REMARK 3 S11: -0.0018 S12: -0.0915 S13: 0.0950 REMARK 3 S21: 0.1565 S22: 0.0070 S23: 0.0709 REMARK 3 S31: 0.0221 S32: 0.0130 S33: -0.0052 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE EXPERIMENTAL PHASES WERE USED AS RESTRAINTS REMARK 3 DURING REFINEMENT. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S REMARK 3 LSSR RESTRAINT REPRESENTATION (-AUTONCS). 5. RESIDUE SER55 IN REMARK 3 BOTH CHAINS AS BEEN MODELED AS A PHOSPHORYLATED SERINE (SEP) REMARK 3 BASED ON ELECTRON DENSITY. REMARK 4 REMARK 4 4Q9A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085765. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97891 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14845 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.860 REMARK 200 RESOLUTION RANGE LOW (A) : 48.817 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.76300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.200M SODIUM CHLORIDE, 40.00% REMARK 280 POLYETHYLENE GLYCOL 400, 0.1M NA/K PHOSPHATE PH 6.2, NANODROP, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 64.41450 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 74.82500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 64.41450 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 74.82500 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 64.41450 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 74.82500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 64.41450 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 74.82500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 64.41450 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 74.82500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 64.41450 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 74.82500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 64.41450 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 74.82500 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 64.41450 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 64.41450 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 74.82500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 29 REMARK 465 VAL A 30 REMARK 465 LYS A 31 REMARK 465 GLU A 32 REMARK 465 ASN A 33 REMARK 465 THR A 34 REMARK 465 SER A 35 REMARK 465 VAL A 36 REMARK 465 HIS A 37 REMARK 465 GLY B 0 REMARK 465 ALA B 29 REMARK 465 VAL B 30 REMARK 465 LYS B 31 REMARK 465 GLU B 32 REMARK 465 ASN B 33 REMARK 465 THR B 34 REMARK 465 SER B 35 REMARK 465 VAL B 36 REMARK 465 HIS B 37 REMARK 465 ALA B 38 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 LYS B 40 CG CD CE NZ REMARK 470 LYS B 256 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 54 -147.29 -118.08 REMARK 500 CYS A 118 -69.21 -154.03 REMARK 500 LEU A 255 34.70 -90.31 REMARK 500 ASP B 54 -143.05 -117.73 REMARK 500 CYS B 59 53.29 36.80 REMARK 500 GLN B 94 66.64 39.69 REMARK 500 CYS B 118 -69.44 -153.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-419167 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (29-256) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4Q9A A 29 256 UNP A7ABD4 A7ABD4_9PORP 29 256 DBREF 4Q9A B 29 256 UNP A7ABD4 A7ABD4_9PORP 29 256 SEQADV 4Q9A GLY A 0 UNP A7ABD4 EXPRESSION TAG SEQADV 4Q9A GLY B 0 UNP A7ABD4 EXPRESSION TAG SEQRES 1 A 229 GLY ALA VAL LYS GLU ASN THR SER VAL HIS ALA PRO LYS SEQRES 2 A 229 ILE ASN LEU LYS LYS ASP CYS VAL ILE LEU PHE GLN GLY SEQRES 3 A 229 ASP SEP ILE THR ASP CYS GLY ARG ASP ARG ASN SER ASN SEQRES 4 A 229 ARG CYS ASN THR MSE GLU GLN PHE GLY SER GLY TYR VAL SEQRES 5 A 229 LEU PHE THR ALA THR GLN LEU LEU GLU GLY LYS ALA ALA SEQRES 6 A 229 LEU GLN PRO LYS ILE TYR ASN ARG GLY ILE SER GLY ASN SEQRES 7 A 229 LYS VAL TYR GLN LEU ARG GLU ARG TRP GLU ILE ASP CYS SEQRES 8 A 229 LEU ALA PHE GLN PRO ASP VAL LEU SER ILE LEU ILE GLY SEQRES 9 A 229 VAL ASN ASP TYR TRP HIS THR LEU THR HIS GLY TYR LYS SEQRES 10 A 229 GLY THR VAL GLU THR TYR GLU ASN ASP LEU ARG ALA LEU SEQRES 11 A 229 LEU LYS TYR THR LYS GLU LYS LEU PRO ASN THR GLN ILE SEQRES 12 A 229 VAL LEU CYS GLU PRO PHE THR LEU ARG ASP GLY ALA ALA SEQRES 13 A 229 ILE GLU ASP SER LYS TRP TYR PRO MSE PHE ASP GLU PHE SEQRES 14 A 229 ARG LYS SER ALA ARG LYS LEU SER GLU GLU PHE ASN THR SEQRES 15 A 229 ILE PHE VAL PRO PHE GLN SER GLY PHE ASP ALA ALA VAL SEQRES 16 A 229 LYS LEU ALA PRO ALA ARG TYR TRP SER ASN ASP GLY VAL SEQRES 17 A 229 HIS PRO ASP LEU PRO GLY ARG GLN LEU MSE ALA ASN MSE SEQRES 18 A 229 TRP MSE GLU ALA THR GLY LEU LYS SEQRES 1 B 229 GLY ALA VAL LYS GLU ASN THR SER VAL HIS ALA PRO LYS SEQRES 2 B 229 ILE ASN LEU LYS LYS ASP CYS VAL ILE LEU PHE GLN GLY SEQRES 3 B 229 ASP SEP ILE THR ASP CYS GLY ARG ASP ARG ASN SER ASN SEQRES 4 B 229 ARG CYS ASN THR MSE GLU GLN PHE GLY SER GLY TYR VAL SEQRES 5 B 229 LEU PHE THR ALA THR GLN LEU LEU GLU GLY LYS ALA ALA SEQRES 6 B 229 LEU GLN PRO LYS ILE TYR ASN ARG GLY ILE SER GLY ASN SEQRES 7 B 229 LYS VAL TYR GLN LEU ARG GLU ARG TRP GLU ILE ASP CYS SEQRES 8 B 229 LEU ALA PHE GLN PRO ASP VAL LEU SER ILE LEU ILE GLY SEQRES 9 B 229 VAL ASN ASP TYR TRP HIS THR LEU THR HIS GLY TYR LYS SEQRES 10 B 229 GLY THR VAL GLU THR TYR GLU ASN ASP LEU ARG ALA LEU SEQRES 11 B 229 LEU LYS TYR THR LYS GLU LYS LEU PRO ASN THR GLN ILE SEQRES 12 B 229 VAL LEU CYS GLU PRO PHE THR LEU ARG ASP GLY ALA ALA SEQRES 13 B 229 ILE GLU ASP SER LYS TRP TYR PRO MSE PHE ASP GLU PHE SEQRES 14 B 229 ARG LYS SER ALA ARG LYS LEU SER GLU GLU PHE ASN THR SEQRES 15 B 229 ILE PHE VAL PRO PHE GLN SER GLY PHE ASP ALA ALA VAL SEQRES 16 B 229 LYS LEU ALA PRO ALA ARG TYR TRP SER ASN ASP GLY VAL SEQRES 17 B 229 HIS PRO ASP LEU PRO GLY ARG GLN LEU MSE ALA ASN MSE SEQRES 18 B 229 TRP MSE GLU ALA THR GLY LEU LYS MODRES 4Q9A SEP A 55 SER PHOSPHOSERINE MODRES 4Q9A MSE A 71 MET SELENOMETHIONINE MODRES 4Q9A MSE A 192 MET SELENOMETHIONINE MODRES 4Q9A MSE A 245 MET SELENOMETHIONINE MODRES 4Q9A MSE A 248 MET SELENOMETHIONINE MODRES 4Q9A MSE A 250 MET SELENOMETHIONINE MODRES 4Q9A SEP B 55 SER PHOSPHOSERINE MODRES 4Q9A MSE B 71 MET SELENOMETHIONINE MODRES 4Q9A MSE B 192 MET SELENOMETHIONINE MODRES 4Q9A MSE B 245 MET SELENOMETHIONINE MODRES 4Q9A MSE B 248 MET SELENOMETHIONINE MODRES 4Q9A MSE B 250 MET SELENOMETHIONINE HET SEP A 55 10 HET MSE A 71 8 HET MSE A 192 8 HET MSE A 245 8 HET MSE A 248 8 HET MSE A 250 8 HET SEP B 55 10 HET MSE B 71 8 HET MSE B 192 8 HET MSE B 245 8 HET MSE B 248 8 HET MSE B 250 8 HETNAM SEP PHOSPHOSERINE HETNAM MSE SELENOMETHIONINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 MSE 10(C5 H11 N O2 SE) HELIX 1 1 ASP A 54 CYS A 59 1 6 HELIX 2 2 THR A 70 GLY A 75 1 6 HELIX 3 3 GLY A 77 LYS A 90 1 14 HELIX 4 4 ALA A 91 GLN A 94 5 4 HELIX 5 5 LYS A 106 GLU A 112 1 7 HELIX 6 6 CYS A 118 GLN A 122 5 5 HELIX 7 7 VAL A 132 HIS A 141 1 10 HELIX 8 8 THR A 146 LEU A 165 1 20 HELIX 9 9 GLU A 185 TYR A 190 1 6 HELIX 10 10 PHE A 193 PHE A 207 1 15 HELIX 11 11 PRO A 213 VAL A 222 1 10 HELIX 12 12 PRO A 226 SER A 231 1 6 HELIX 13 13 ASP A 238 GLY A 254 1 17 HELIX 14 14 ASP B 54 CYS B 59 1 6 HELIX 15 15 THR B 70 GLY B 75 1 6 HELIX 16 16 GLY B 77 LYS B 90 1 14 HELIX 17 17 ALA B 91 GLN B 94 5 4 HELIX 18 18 LYS B 106 GLU B 112 1 7 HELIX 19 19 CYS B 118 GLN B 122 5 5 HELIX 20 20 GLY B 131 HIS B 141 1 11 HELIX 21 21 THR B 146 LEU B 165 1 20 HELIX 22 22 GLU B 185 TYR B 190 1 6 HELIX 23 23 PHE B 193 PHE B 207 1 15 HELIX 24 24 PRO B 213 VAL B 222 1 10 HELIX 25 25 PRO B 226 SER B 231 1 6 HELIX 26 26 ASP B 238 GLY B 254 1 17 SHEET 1 A 5 LYS A 96 ASN A 99 0 SHEET 2 A 5 VAL A 48 GLY A 53 1 N ILE A 49 O TYR A 98 SHEET 3 A 5 VAL A 125 LEU A 129 1 O SER A 127 N LEU A 50 SHEET 4 A 5 GLN A 169 CYS A 173 1 O CYS A 173 N ILE A 128 SHEET 5 A 5 ILE A 210 VAL A 212 1 O ILE A 210 N LEU A 172 SHEET 1 B 5 LYS B 96 ASN B 99 0 SHEET 2 B 5 VAL B 48 GLY B 53 1 N ILE B 49 O TYR B 98 SHEET 3 B 5 VAL B 125 LEU B 129 1 O SER B 127 N LEU B 50 SHEET 4 B 5 GLN B 169 CYS B 173 1 O CYS B 173 N ILE B 128 SHEET 5 B 5 ILE B 210 VAL B 212 1 O ILE B 210 N LEU B 172 LINK C ASP A 54 N SEP A 55 1555 1555 1.35 LINK C SEP A 55 N ILE A 56 1555 1555 1.36 LINK C THR A 70 N MSE A 71 1555 1555 1.35 LINK C MSE A 71 N GLU A 72 1555 1555 1.35 LINK C PRO A 191 N MSE A 192 1555 1555 1.34 LINK C MSE A 192 N PHE A 193 1555 1555 1.35 LINK C LEU A 244 N MSE A 245 1555 1555 1.36 LINK C MSE A 245 N ALA A 246 1555 1555 1.37 LINK C ASN A 247 N MSE A 248 1555 1555 1.35 LINK C MSE A 248 N TRP A 249 1555 1555 1.33 LINK C TRP A 249 N MSE A 250 1555 1555 1.34 LINK C MSE A 250 N GLU A 251 1555 1555 1.35 LINK C ASP B 54 N SEP B 55 1555 1555 1.34 LINK C SEP B 55 N ILE B 56 1555 1555 1.35 LINK C THR B 70 N MSE B 71 1555 1555 1.35 LINK C MSE B 71 N GLU B 72 1555 1555 1.35 LINK C PRO B 191 N MSE B 192 1555 1555 1.35 LINK C MSE B 192 N PHE B 193 1555 1555 1.36 LINK C LEU B 244 N MSE B 245 1555 1555 1.36 LINK C MSE B 245 N ALA B 246 1555 1555 1.36 LINK C ASN B 247 N MSE B 248 1555 1555 1.36 LINK C MSE B 248 N TRP B 249 1555 1555 1.34 LINK C TRP B 249 N MSE B 250 1555 1555 1.35 LINK C MSE B 250 N GLU B 251 1555 1555 1.34 CISPEP 1 TYR A 190 PRO A 191 0 5.11 CISPEP 2 TYR B 190 PRO B 191 0 4.83 CRYST1 128.829 128.829 149.650 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007762 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006682 0.00000