HEADER HYDROLASE 08-MAY-14 4QBO TITLE VRR_NUC DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PHAGE P9; SOURCE 3 ORGANISM_TAXID: 403905; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.J.SMERDON,S.PENNELL,J.LI REVDAT 3 28-FEB-24 4QBO 1 REMARK SEQADV LINK REVDAT 2 22-NOV-17 4QBO 1 REMARK REVDAT 1 10-SEP-14 4QBO 0 JRNL AUTH S.PENNELL,A.C.DECLAIS,J.LI,L.F.HAIRE,W.BERG,J.W.SALDANHA, JRNL AUTH 2 I.A.TAYLOR,J.ROUSE,D.M.LILLEY,S.J.SMERDON JRNL TITL FAN1 ACTIVITY ON ASYMMETRIC REPAIR INTERMEDIATES IS MEDIATED JRNL TITL 2 BY AN ATYPICAL MONOMERIC VIRUS-TYPE REPLICATION-REPAIR JRNL TITL 3 NUCLEASE DOMAIN. JRNL REF CELL REP V. 8 84 2014 JRNL REFN ESSN 2211-1247 JRNL PMID 24981866 JRNL DOI 10.1016/J.CELREP.2014.06.001 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 27354 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1378 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.9958 - 2.7954 0.97 2677 131 0.1850 0.1743 REMARK 3 2 2.7954 - 2.2211 1.00 2632 140 0.1517 0.1678 REMARK 3 3 2.2211 - 1.9410 1.00 2605 159 0.1468 0.1574 REMARK 3 4 1.9410 - 1.7638 1.00 2624 129 0.1428 0.1754 REMARK 3 5 1.7638 - 1.6376 1.00 2576 141 0.1515 0.1628 REMARK 3 6 1.6376 - 1.5411 1.00 2607 142 0.1589 0.1873 REMARK 3 7 1.5411 - 1.4640 1.00 2584 132 0.1691 0.2118 REMARK 3 8 1.4640 - 1.4003 1.00 2578 125 0.2142 0.2328 REMARK 3 9 1.4003 - 1.3465 1.00 2592 128 0.2669 0.2837 REMARK 3 10 1.3465 - 1.3000 0.98 2501 151 0.3307 0.3072 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.47 REMARK 3 K_SOL : 0.47 REMARK 3 B_SOL : 63.59 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.18970 REMARK 3 B22 (A**2) : -0.34060 REMARK 3 B33 (A**2) : 2.53040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 842 REMARK 3 ANGLE : 1.274 1139 REMARK 3 CHIRALITY : 0.068 121 REMARK 3 PLANARITY : 0.007 146 REMARK 3 DIHEDRAL : 10.400 341 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 4:19) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5103 -11.7985 15.8916 REMARK 3 T TENSOR REMARK 3 T11: 0.1285 T22: 0.1521 REMARK 3 T33: 0.0924 T12: 0.0003 REMARK 3 T13: 0.0091 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 4.1347 L22: 3.0886 REMARK 3 L33: 1.3446 L12: 2.8867 REMARK 3 L13: -1.1201 L23: -0.6897 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: 0.0253 S13: 0.0843 REMARK 3 S21: 0.0479 S22: -0.0286 S23: 0.1371 REMARK 3 S31: -0.0238 S32: -0.1796 S33: 0.0016 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 20:37) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1846 -3.4315 3.0173 REMARK 3 T TENSOR REMARK 3 T11: 0.1371 T22: 0.1435 REMARK 3 T33: 0.1385 T12: -0.0001 REMARK 3 T13: -0.0154 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.8830 L22: 1.8448 REMARK 3 L33: 3.9814 L12: 0.8956 REMARK 3 L13: 1.7343 L23: 1.3202 REMARK 3 S TENSOR REMARK 3 S11: 0.1598 S12: -0.1288 S13: -0.1198 REMARK 3 S21: 0.0021 S22: -0.0820 S23: 0.0780 REMARK 3 S31: 0.1325 S32: -0.2832 S33: -0.0715 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 38:44) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9451 -0.8395 6.6698 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.0790 REMARK 3 T33: 0.1467 T12: 0.0087 REMARK 3 T13: -0.0064 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 6.3776 L22: 4.2321 REMARK 3 L33: 3.5959 L12: 1.8321 REMARK 3 L13: -1.2965 L23: -0.8642 REMARK 3 S TENSOR REMARK 3 S11: -0.0862 S12: -0.0705 S13: 0.1359 REMARK 3 S21: 0.0881 S22: 0.0821 S23: -0.4727 REMARK 3 S31: 0.0772 S32: -0.0208 S33: 0.0498 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 45:59) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7175 -13.9525 4.4099 REMARK 3 T TENSOR REMARK 3 T11: 0.1283 T22: 0.1162 REMARK 3 T33: 0.1343 T12: -0.0168 REMARK 3 T13: -0.0036 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 1.5140 L22: 0.6046 REMARK 3 L33: 1.2214 L12: 0.3933 REMARK 3 L13: 0.1620 L23: 0.1019 REMARK 3 S TENSOR REMARK 3 S11: 0.0739 S12: -0.1124 S13: -0.2478 REMARK 3 S21: 0.1246 S22: -0.0348 S23: -0.0811 REMARK 3 S31: 0.1291 S32: -0.1085 S33: -0.0082 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 60:72) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8187 -12.1680 -6.7369 REMARK 3 T TENSOR REMARK 3 T11: 0.1386 T22: 0.1090 REMARK 3 T33: 0.1293 T12: -0.0144 REMARK 3 T13: 0.0087 T23: -0.0256 REMARK 3 L TENSOR REMARK 3 L11: 5.5448 L22: 3.3209 REMARK 3 L33: 1.0329 L12: 4.0764 REMARK 3 L13: -1.7571 L23: -1.6676 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: 0.0973 S13: -0.1096 REMARK 3 S21: -0.2115 S22: 0.0694 S23: -0.1387 REMARK 3 S31: -0.0540 S32: -0.0090 S33: -0.0252 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 73:90) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0958 -11.2454 8.9037 REMARK 3 T TENSOR REMARK 3 T11: 0.0914 T22: 0.1047 REMARK 3 T33: 0.1139 T12: 0.0175 REMARK 3 T13: 0.0028 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.9021 L22: 1.6930 REMARK 3 L33: 2.5857 L12: 0.6150 REMARK 3 L13: -1.1647 L23: -0.5545 REMARK 3 S TENSOR REMARK 3 S11: -0.0231 S12: -0.1322 S13: 0.0446 REMARK 3 S21: 0.0214 S22: 0.0266 S23: -0.0983 REMARK 3 S31: 0.1144 S32: 0.1527 S33: 0.0512 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QBO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NA REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27396 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 15.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM CITRATE, 20% W/V PEG3350, REMARK 280 PH 7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.56850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.56850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 22.42700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.25850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 22.42700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.25850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.56850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 22.42700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 30.25850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.56850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 22.42700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 30.25850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 344 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 5 O HOH A 327 1.22 REMARK 500 HZ2 LYS A 13 O HOH A 322 1.40 REMARK 500 HZ1 LYS A 63 O HOH A 337 1.53 REMARK 500 O HOH A 258 O HOH A 312 1.87 REMARK 500 O HOH A 328 O HOH A 335 1.88 REMARK 500 O HOH A 252 O HOH A 326 2.00 REMARK 500 NZ LYS A 63 O HOH A 337 2.06 REMARK 500 NZ LYS A 5 O HOH A 327 2.09 REMARK 500 NZ LYS A 13 O HOH A 322 2.13 REMARK 500 O HOH A 296 O HOH A 353 2.16 REMARK 500 NZ LYS A 21 O HOH A 308 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 86 O HOH A 254 8545 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 75 20.19 -142.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 4 OE2 REMARK 620 2 ASP A 32 OD2 105.5 REMARK 620 3 GLU A 45 OE2 169.5 84.9 REMARK 620 4 VAL A 46 O 84.9 87.9 94.0 REMARK 620 5 HOH A 217 O 80.8 171.7 89.0 98.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 101 DBREF 4QBO A 1 90 UNP A7J283 A7J283_9CAUD 1 90 SEQADV 4QBO GLY A -1 UNP A7J283 EXPRESSION TAG SEQADV 4QBO SER A 0 UNP A7J283 EXPRESSION TAG SEQRES 1 A 92 GLY SER MET ARG THR GLU LYS ASP ILE GLU ASN TYR LEU SEQRES 2 A 92 LYS LYS LYS THR LYS GLY LEU CYS LEU LYS PHE THR SER SEQRES 3 A 92 PRO GLY THR ILE GLY VAL PRO ASP ARG ILE VAL VAL MET SEQRES 4 A 92 ASN THR GLY THR PHE PHE VAL GLU VAL LYS ALA PRO GLY SEQRES 5 A 92 LYS LYS PRO ARG PRO SER GLN VAL ALA MET HIS LYS LYS SEQRES 6 A 92 ILE LYS GLU ALA GLY GLN HIS VAL TRP VAL VAL ASP SER SEQRES 7 A 92 TYR GLU SER VAL ASP MET ALA LEU LYS GLU MET GLU ASN SEQRES 8 A 92 TRP HET MG A 101 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG MG 2+ FORMUL 3 HOH *155(H2 O) HELIX 1 1 THR A 3 THR A 15 1 13 HELIX 2 2 ARG A 54 GLY A 68 1 15 HELIX 3 3 SER A 76 ASN A 89 1 14 SHEET 1 A 4 LEU A 18 LYS A 21 0 SHEET 2 A 4 ARG A 33 MET A 37 -1 O VAL A 36 N LEU A 18 SHEET 3 A 4 GLY A 40 VAL A 46 -1 O PHE A 42 N VAL A 35 SHEET 4 A 4 VAL A 71 VAL A 74 1 O TRP A 72 N GLU A 45 LINK OE2 GLU A 4 MG MG A 101 1555 1555 2.51 LINK OD2 ASP A 32 MG MG A 101 1555 1555 2.34 LINK OE2 GLU A 45 MG MG A 101 1555 1555 2.35 LINK O VAL A 46 MG MG A 101 1555 1555 2.27 LINK MG MG A 101 O HOH A 217 1555 1555 2.44 SITE 1 AC1 5 GLU A 4 ASP A 32 GLU A 45 VAL A 46 SITE 2 AC1 5 HOH A 217 CRYST1 44.854 60.517 81.137 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022295 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016524 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012325 0.00000