HEADER TRANSFERASE/ANTIBIOTIC 09-MAY-14 4QC6 TITLE CRYSTAL STRUCTURE OF AMINOGLYCOSIDE 6'-ACETYLTRANSFERASE-IE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL AAC/APH; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 6'-AMINOGLYCOSIDE N-ACETYLTRANSFERASE, AAC(6'), 2''- COMPND 5 AMINOGLYCOSIDE PHOSPHOTRANSFERASE, APH(2''); COMPND 6 EC: 2.3.1.-, 2.7.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS WARNERI; SOURCE 3 ORGANISM_TAXID: 1292; SOURCE 4 GENE: AACA-APHD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTIBIOTIC RESISTANCE, GNAT FAMILY, ACETYLTRANSFERASE, KEYWDS 2 ACETYLCOENZYME-A, AMINOGLYCOSIDE, TRANSFERASE, TRANSFERASE- KEYWDS 3 ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.A.SMITH,M.TOTH,T.M.WEISS,H.FRASE,S.B.VAKULENKO REVDAT 2 28-FEB-24 4QC6 1 REMARK REVDAT 1 22-OCT-14 4QC6 0 JRNL AUTH C.A.SMITH,M.TOTH,T.M.WEISS,H.FRASE,S.B.VAKULENKO JRNL TITL STRUCTURE OF THE BIFUNCTIONAL AMINOGLYCOSIDE-RESISTANCE JRNL TITL 2 ENZYME AAC(6')-IE-APH(2'')-IA REVEALED BY CRYSTALLOGRAPHIC JRNL TITL 3 AND SMALL-ANGLE X-RAY SCATTERING ANALYSIS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2754 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25286858 JRNL DOI 10.1107/S1399004714017635 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 112422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 5671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9437 - 4.0287 0.99 3830 194 0.1495 0.1423 REMARK 3 2 4.0287 - 3.2020 0.99 3691 197 0.1483 0.1735 REMARK 3 3 3.2020 - 2.7985 1.00 3642 197 0.1602 0.1676 REMARK 3 4 2.7985 - 2.5431 1.00 3631 196 0.1645 0.1660 REMARK 3 5 2.5431 - 2.3612 1.00 3639 186 0.1629 0.1890 REMARK 3 6 2.3612 - 2.2222 1.00 3602 183 0.1499 0.1730 REMARK 3 7 2.2222 - 2.1110 1.00 3592 205 0.1421 0.1485 REMARK 3 8 2.1110 - 2.0192 1.00 3620 181 0.1387 0.1549 REMARK 3 9 2.0192 - 1.9415 1.00 3601 184 0.1380 0.1636 REMARK 3 10 1.9415 - 1.8746 1.00 3579 209 0.1436 0.1576 REMARK 3 11 1.8746 - 1.8160 1.00 3580 198 0.1424 0.1669 REMARK 3 12 1.8160 - 1.7641 1.00 3553 198 0.1369 0.1700 REMARK 3 13 1.7641 - 1.7177 1.00 3616 192 0.1319 0.1684 REMARK 3 14 1.7177 - 1.6758 1.00 3573 184 0.1232 0.1634 REMARK 3 15 1.6758 - 1.6378 1.00 3614 182 0.1214 0.1516 REMARK 3 16 1.6378 - 1.6029 1.00 3533 202 0.1214 0.1778 REMARK 3 17 1.6029 - 1.5709 1.00 3572 199 0.1212 0.1617 REMARK 3 18 1.5709 - 1.5412 1.00 3572 203 0.1168 0.1417 REMARK 3 19 1.5412 - 1.5137 1.00 3554 174 0.1157 0.1625 REMARK 3 20 1.5137 - 1.4881 1.00 3598 190 0.1224 0.1603 REMARK 3 21 1.4881 - 1.4641 1.00 3556 180 0.1284 0.1655 REMARK 3 22 1.4641 - 1.4415 1.00 3598 200 0.1357 0.1632 REMARK 3 23 1.4415 - 1.4204 1.00 3532 184 0.1348 0.1600 REMARK 3 24 1.4204 - 1.4004 1.00 3535 201 0.1422 0.1896 REMARK 3 25 1.4004 - 1.3814 0.99 3561 186 0.1503 0.1843 REMARK 3 26 1.3814 - 1.3635 0.99 3539 184 0.1570 0.1834 REMARK 3 27 1.3635 - 1.3465 0.98 3449 203 0.1678 0.2164 REMARK 3 28 1.3465 - 1.3302 0.97 3482 164 0.1825 0.2062 REMARK 3 29 1.3302 - 1.3148 0.94 3380 163 0.1946 0.2420 REMARK 3 30 1.3148 - 1.3000 0.82 2927 152 0.2090 0.2579 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3541 REMARK 3 ANGLE : 1.292 4838 REMARK 3 CHIRALITY : 0.056 516 REMARK 3 PLANARITY : 0.006 594 REMARK 3 DIHEDRAL : 19.988 1445 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QC6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085869. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 112448 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 19.941 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.37100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: UNBUFFERED 0.2 M AMMONIUM FORMATE, 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.41500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.48000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.86000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.48000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.41500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.86000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 6 -111.86 48.98 REMARK 500 ASN A 141 66.97 -117.41 REMARK 500 ASN B 6 -121.10 53.36 REMARK 500 ASN B 141 74.07 -117.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KAN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 30N A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KAN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 30N B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 205 DBREF 4QC6 A 1 179 UNP Q7ATH7 AACA_STAWA 1 179 DBREF 4QC6 B 1 179 UNP Q7ATH7 AACA_STAWA 1 179 SEQRES 1 A 179 MET ASN ILE VAL GLU ASN GLU ILE CYS ILE ARG THR LEU SEQRES 2 A 179 ILE ASP ASP ASP PHE PRO LEU MET LEU LYS TRP LEU THR SEQRES 3 A 179 ASP GLU ARG VAL LEU GLU PHE TYR GLY GLY ARG ASP LYS SEQRES 4 A 179 LYS TYR THR LEU GLU SER LEU LYS LYS HIS TYR THR GLU SEQRES 5 A 179 PRO TRP GLU ASP GLU VAL PHE ARG VAL ILE ILE GLU TYR SEQRES 6 A 179 ASN ASN VAL PRO ILE GLY TYR GLY GLN ILE TYR LYS MET SEQRES 7 A 179 TYR ASP GLU LEU TYR THR ASP TYR HIS TYR PRO LYS THR SEQRES 8 A 179 ASP GLU ILE VAL TYR GLY MET ASP GLN PHE ILE GLY GLU SEQRES 9 A 179 PRO ASN TYR TRP SER LYS GLY ILE GLY THR ARG TYR ILE SEQRES 10 A 179 LYS LEU ILE PHE GLU PHE LEU LYS LYS GLU ARG ASN ALA SEQRES 11 A 179 ASN ALA VAL ILE LEU ASP PRO HIS LYS ASN ASN PRO ARG SEQRES 12 A 179 ALA ILE ARG ALA TYR GLN LYS SER GLY PHE ARG ILE ILE SEQRES 13 A 179 GLU ASP LEU PRO GLU HIS GLU LEU HIS GLU GLY LYS LYS SEQRES 14 A 179 GLU ASP CYS TYR LEU MET GLU TYR ARG TYR SEQRES 1 B 179 MET ASN ILE VAL GLU ASN GLU ILE CYS ILE ARG THR LEU SEQRES 2 B 179 ILE ASP ASP ASP PHE PRO LEU MET LEU LYS TRP LEU THR SEQRES 3 B 179 ASP GLU ARG VAL LEU GLU PHE TYR GLY GLY ARG ASP LYS SEQRES 4 B 179 LYS TYR THR LEU GLU SER LEU LYS LYS HIS TYR THR GLU SEQRES 5 B 179 PRO TRP GLU ASP GLU VAL PHE ARG VAL ILE ILE GLU TYR SEQRES 6 B 179 ASN ASN VAL PRO ILE GLY TYR GLY GLN ILE TYR LYS MET SEQRES 7 B 179 TYR ASP GLU LEU TYR THR ASP TYR HIS TYR PRO LYS THR SEQRES 8 B 179 ASP GLU ILE VAL TYR GLY MET ASP GLN PHE ILE GLY GLU SEQRES 9 B 179 PRO ASN TYR TRP SER LYS GLY ILE GLY THR ARG TYR ILE SEQRES 10 B 179 LYS LEU ILE PHE GLU PHE LEU LYS LYS GLU ARG ASN ALA SEQRES 11 B 179 ASN ALA VAL ILE LEU ASP PRO HIS LYS ASN ASN PRO ARG SEQRES 12 B 179 ALA ILE ARG ALA TYR GLN LYS SER GLY PHE ARG ILE ILE SEQRES 13 B 179 GLU ASP LEU PRO GLU HIS GLU LEU HIS GLU GLY LYS LYS SEQRES 14 B 179 GLU ASP CYS TYR LEU MET GLU TYR ARG TYR HET KAN A 201 33 HET 30N A 202 50 HET FMT A 203 3 HET FMT A 204 3 HET KAN B 201 66 HET 30N B 202 50 HET FMT B 203 3 HET FMT B 204 3 HET FMT B 205 3 HETNAM KAN KANAMYCIN A HETNAM 30N (3R,5S,9R)-1-[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)- HETNAM 2 30N 4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]-3,5,9- HETNAM 3 30N TRIHYDROXY-8,8-DIMETHYL-10,14-DIOXO-2,4,6-TRIOXA-11, HETNAM 4 30N 15-DIAZA-3,5-DIPHOSPHAHEPTADECANE-17-SULFINIC ACID 3, HETNAM 5 30N 5-DIOXIDE (NON-PREFERRED NAME) HETNAM FMT FORMIC ACID FORMUL 3 KAN 2(C18 H36 N4 O11) FORMUL 4 30N 2(C21 H36 N7 O18 P3 S) FORMUL 5 FMT 5(C H2 O2) FORMUL 12 HOH *705(H2 O) HELIX 1 1 ILE A 14 ASP A 16 5 3 HELIX 2 2 ASP A 17 LEU A 25 1 9 HELIX 3 3 ASP A 27 GLU A 32 1 6 HELIX 4 4 THR A 42 TYR A 50 1 9 HELIX 5 5 TYR A 79 HIS A 87 1 9 HELIX 6 6 GLU A 104 TRP A 108 5 5 HELIX 7 7 GLY A 111 ASN A 129 1 19 HELIX 8 8 ASN A 141 GLY A 152 1 12 HELIX 9 9 ILE B 14 ASP B 16 5 3 HELIX 10 10 ASP B 17 LEU B 25 1 9 HELIX 11 11 ASP B 27 GLU B 32 1 6 HELIX 12 12 THR B 42 TYR B 50 1 9 HELIX 13 13 TYR B 79 HIS B 87 1 9 HELIX 14 14 GLU B 104 TRP B 108 5 5 HELIX 15 15 GLY B 111 ASN B 129 1 19 HELIX 16 16 ASN B 141 GLY B 152 1 12 SHEET 1 A 8 ASN A 2 GLU A 5 0 SHEET 2 A 8 ILE A 8 THR A 12 -1 O ILE A 10 N ILE A 3 SHEET 3 A 8 VAL A 58 TYR A 65 -1 O GLU A 64 N CYS A 9 SHEET 4 A 8 VAL A 68 LYS A 77 -1 O ILE A 70 N ILE A 63 SHEET 5 A 8 VAL A 95 ILE A 102 -1 O GLY A 97 N TYR A 76 SHEET 6 A 8 ALA A 132 LEU A 135 1 O ILE A 134 N TYR A 96 SHEET 7 A 8 LYS A 168 TYR A 177 -1 O TYR A 177 N VAL A 133 SHEET 8 A 8 ARG A 154 HIS A 165 -1 N GLU A 163 O GLU A 170 SHEET 1 B 8 ASN B 2 GLU B 5 0 SHEET 2 B 8 ILE B 8 THR B 12 -1 O ILE B 10 N ILE B 3 SHEET 3 B 8 VAL B 58 TYR B 65 -1 O GLU B 64 N CYS B 9 SHEET 4 B 8 VAL B 68 LYS B 77 -1 O ILE B 70 N ILE B 63 SHEET 5 B 8 VAL B 95 ILE B 102 -1 O GLY B 97 N TYR B 76 SHEET 6 B 8 ALA B 132 LEU B 135 1 O ILE B 134 N TYR B 96 SHEET 7 B 8 LYS B 168 TYR B 177 -1 O TYR B 177 N VAL B 133 SHEET 8 B 8 ARG B 154 HIS B 165 -1 N HIS B 165 O LYS B 168 SITE 1 AC1 26 TYR A 34 GLY A 35 HIS A 49 TYR A 50 SITE 2 AC1 26 GLU A 52 TRP A 54 GLN A 74 ASP A 136 SITE 3 AC1 26 HIS A 138 GLU A 163 30N A 202 FMT A 203 SITE 4 AC1 26 HOH A 375 HOH A 377 HOH A 379 HOH A 380 SITE 5 AC1 26 HOH A 381 HOH A 383 HOH A 385 HOH A 386 SITE 6 AC1 26 HOH A 406 HOH A 439 HOH A 459 HOH A 527 SITE 7 AC1 26 HOH A 529 HOH A 577 SITE 1 AC2 34 PHE A 33 GLN A 100 PHE A 101 ILE A 102 SITE 2 AC2 34 TRP A 108 SER A 109 LYS A 110 GLY A 111 SITE 3 AC2 34 ILE A 112 GLY A 113 THR A 114 PRO A 137 SITE 4 AC2 34 ASN A 141 PRO A 142 ARG A 143 ARG A 146 SITE 5 AC2 34 ALA A 147 TYR A 148 LYS A 150 KAN A 201 SITE 6 AC2 34 HOH A 301 HOH A 302 HOH A 304 HOH A 318 SITE 7 AC2 34 HOH A 376 HOH A 378 HOH A 387 HOH A 443 SITE 8 AC2 34 HOH A 457 HOH A 465 HOH A 527 HOH A 535 SITE 9 AC2 34 HOH A 595 HOH A 659 SITE 1 AC3 7 TYR A 34 GLY A 35 TYR A 41 TYR A 50 SITE 2 AC3 7 KAN A 201 HOH A 405 HOH A 607 SITE 1 AC4 3 HOH A 457 HOH A 657 HOH A 674 SITE 1 AC5 27 ASN A 66 TYR B 34 GLY B 35 HIS B 49 SITE 2 AC5 27 TYR B 50 GLU B 52 TRP B 54 ARG B 60 SITE 3 AC5 27 GLN B 74 LEU B 82 ASP B 85 TYR B 86 SITE 4 AC5 27 ASP B 99 ASP B 136 HIS B 138 GLU B 163 SITE 5 AC5 27 30N B 202 FMT B 203 HOH B 301 HOH B 398 SITE 6 AC5 27 HOH B 399 HOH B 439 HOH B 445 HOH B 468 SITE 7 AC5 27 HOH B 469 HOH B 471 HOH B 550 SITE 1 AC6 37 ARG A 146 GLN A 149 TYR A 173 HOH A 432 SITE 2 AC6 37 HOH A 462 HOH A 678 PHE B 33 GLN B 100 SITE 3 AC6 37 PHE B 101 ILE B 102 TRP B 108 SER B 109 SITE 4 AC6 37 LYS B 110 GLY B 111 ILE B 112 GLY B 113 SITE 5 AC6 37 THR B 114 PRO B 137 ASN B 141 ARG B 143 SITE 6 AC6 37 ALA B 144 ARG B 146 ALA B 147 TYR B 148 SITE 7 AC6 37 LYS B 150 KAN B 201 HOH B 301 HOH B 302 SITE 8 AC6 37 HOH B 351 HOH B 352 HOH B 365 HOH B 378 SITE 9 AC6 37 HOH B 379 HOH B 397 HOH B 405 HOH B 439 SITE 10 AC6 37 HOH B 505 SITE 1 AC7 6 TYR B 34 GLY B 35 TYR B 41 TYR B 50 SITE 2 AC7 6 KAN B 201 HOH B 399 SITE 1 AC8 7 LYS A 126 LEU B 13 HOH B 335 HOH B 356 SITE 2 AC8 7 HOH B 487 HOH B 495 HOH B 597 SITE 1 AC9 6 LEU A 164 GLY A 167 ASN B 106 TYR B 107 SITE 2 AC9 6 LYS B 110 HOH B 577 CRYST1 52.830 89.720 96.960 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018929 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011146 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010314 0.00000