HEADER CYTOKINE/CYTOKINE RECEPTOR 12-MAY-14 4QCI TITLE PDGF-B BLOCKING ANTIBODY BOUND TO PDGF-BB CAVEAT 4QCI SOME CLOSE CONTACT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-PDGF-BB ANTIBODY - LIGHT CHAIN; COMPND 3 CHAIN: A, L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI-PDGF-BB ANTIBODY - HEAVY CHAIN; COMPND 7 CHAIN: B, H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: PLATELET-DERIVED GROWTH FACTOR SUBUNIT B; COMPND 11 CHAIN: C, D; COMPND 12 SYNONYM: PDGF SUBUNIT B, PDGF-2, PLATELET-DERIVED GROWTH FACTOR B COMPND 13 CHAIN, PLATELET-DERIVED GROWTH FACTOR BETA POLYPEPTIDE, PROTO- COMPND 14 ONCOGENE C-SIS; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: PDGFB, PDGF2, SIS; SOURCE 20 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 22 EXPRESSION_SYSTEM_CELL_LINE: CHO KEYWDS GROWTH FACTOR CYTOKINE FOLD, GROWTH FACTOR HORMONE, PDGFR-BETA KEYWDS 2 RECEPTOR, EXTRACELLULAR, CYTOKINE-CYTOKINE RECEPTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.KUAI,L.MOSYAK,M.TAM,E.LAVALLIE,N.PULLEN,G.CARVEN REVDAT 4 06-MAR-24 4QCI 1 REMARK SEQADV SSBOND REVDAT 3 14-FEB-18 4QCI 1 REMARK REVDAT 2 01-APR-15 4QCI 1 JRNL REVDAT 1 11-MAR-15 4QCI 0 JRNL AUTH J.KUAI,L.MOSYAK,J.BROOKS,M.CAIN,G.J.CARVEN,S.OGAWA,T.ISHINO, JRNL AUTH 2 M.TAM,E.R.LAVALLIE,Z.YANG,D.PONSEL,R.RAUCHENBERGER,R.ARCH, JRNL AUTH 3 N.PULLEN JRNL TITL CHARACTERIZATION OF BINDING MODE OF ACTION OF A BLOCKING JRNL TITL 2 ANTI-PLATELET-DERIVED GROWTH FACTOR (PDGF)-B MONOCLONAL JRNL TITL 3 ANTIBODY, MOR8457, REVEALS CONFORMATIONAL FLEXIBILITY AND JRNL TITL 4 AVIDITY NEEDED FOR PDGF-BB TO BIND PDGF RECEPTOR-BETA. JRNL REF BIOCHEMISTRY V. 54 1918 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25707433 JRNL DOI 10.1021/BI5015425 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 51112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM 5% REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2612 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.36 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.40 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3699 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2423 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3512 REMARK 3 BIN R VALUE (WORKING SET) : 0.2412 REMARK 3 BIN FREE R VALUE : 0.2632 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.06 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 187 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7759 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 327 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.10400 REMARK 3 B22 (A**2) : -9.46430 REMARK 3 B33 (A**2) : 3.36030 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -8.85310 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.342 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.319 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7960 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 10857 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : 167 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1154 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1067 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8594 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.19 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.08 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.93 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QCI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51112 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 69.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18 C FROM A SOLUTION CONTAINING 22% REMARK 280 PEG 3350 AND 0.1M TRIS, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.23500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 CYS A 208 REMARK 465 LEU A 209 REMARK 465 SER B 135 REMARK 465 ALA B 136 REMARK 465 ALA B 137 REMARK 465 GLN B 138 REMARK 465 THR B 139 REMARK 465 ASN B 140 REMARK 465 ASP B 221 REMARK 465 CYS B 222 REMARK 465 GLY B 223 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 LEU C 2 REMARK 465 GLY C 3 REMARK 465 SER C 4 REMARK 465 LEU C 5 REMARK 465 THR C 6 REMARK 465 ILE C 7 REMARK 465 ALA C 8 REMARK 465 GLU C 9 REMARK 465 VAL C 102 REMARK 465 ALA C 103 REMARK 465 ALA C 104 REMARK 465 ALA C 105 REMARK 465 ARG C 106 REMARK 465 PRO C 107 REMARK 465 VAL C 108 REMARK 465 THR C 109 REMARK 465 MET D 0 REMARK 465 SER D 1 REMARK 465 LEU D 2 REMARK 465 GLY D 3 REMARK 465 SER D 4 REMARK 465 LEU D 5 REMARK 465 THR D 6 REMARK 465 ALA D 103 REMARK 465 ALA D 104 REMARK 465 ALA D 105 REMARK 465 ARG D 106 REMARK 465 PRO D 107 REMARK 465 VAL D 108 REMARK 465 THR D 109 REMARK 465 GLY H 134 REMARK 465 SER H 135 REMARK 465 ALA H 136 REMARK 465 ALA H 137 REMARK 465 GLN H 138 REMARK 465 THR H 139 REMARK 465 ASN H 140 REMARK 465 SER H 141 REMARK 465 SER H 192 REMARK 465 SER H 193 REMARK 465 THR H 194 REMARK 465 TRP H 195 REMARK 465 PRO H 196 REMARK 465 SER H 197 REMARK 465 GLU H 198 REMARK 465 THR H 199 REMARK 465 ASP H 221 REMARK 465 CYS H 222 REMARK 465 GLY H 223 REMARK 465 SER L 1 REMARK 465 TYR L 2 REMARK 465 ALA L 206 REMARK 465 GLU L 207 REMARK 465 CYS L 208 REMARK 465 LEU L 209 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 178 OG1 THR B 183 1.55 REMARK 500 O VAL H 200 N ILE H 217 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 -49.84 70.30 REMARK 500 ALA A 83 -179.13 -174.40 REMARK 500 ASN A 149 -91.83 64.96 REMARK 500 ALA A 206 4.73 -69.92 REMARK 500 SER B 167 -50.61 -123.94 REMARK 500 SER B 179 -73.67 -141.05 REMARK 500 VAL C 78 38.09 -73.26 REMARK 500 ASN D 36 67.45 -61.84 REMARK 500 VAL D 78 35.75 -73.22 REMARK 500 PRO H 41 -74.92 -25.05 REMARK 500 GLN H 178 -114.52 -72.61 REMARK 500 ASP L 50 -50.85 71.05 REMARK 500 ALA L 83 -179.99 -174.70 REMARK 500 ASN L 149 -87.42 68.42 REMARK 500 REMARK 500 REMARK: NULL DBREF 4QCI C 1 109 UNP P01127 PDGFB_HUMAN 82 190 DBREF 4QCI D 1 109 UNP P01127 PDGFB_HUMAN 82 190 DBREF 4QCI A 1 209 PDB 4QCI 4QCI 1 209 DBREF 4QCI L 1 209 PDB 4QCI 4QCI 1 209 DBREF 4QCI B 1 223 PDB 4QCI 4QCI 1 223 DBREF 4QCI H 1 223 PDB 4QCI 4QCI 1 223 SEQADV 4QCI MET C 0 UNP P01127 EXPRESSION TAG SEQADV 4QCI MET D 0 UNP P01127 EXPRESSION TAG SEQRES 1 A 209 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 A 209 PRO GLY GLN THR ALA ARG ILE SER CYS SER GLY ASP SER SEQRES 3 A 209 LEU GLY SER TYR PHE VAL HIS TRP TYR GLN GLN LYS PRO SEQRES 4 A 209 GLY GLN ALA PRO VAL LEU VAL ILE TYR ASP ASP SER ASN SEQRES 5 A 209 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 A 209 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 A 209 ALA GLU ASP GLU ALA ASP TYR TYR CYS SER ALA PHE THR SEQRES 8 A 209 HIS ASN SER ASP VAL PHE GLY GLY GLY THR LYS LEU THR SEQRES 9 A 209 VAL LEU PRO LYS SER THR PRO THR LEU THR VAL PHE PRO SEQRES 10 A 209 PRO SER SER GLU GLU LEU LYS GLU ASN LYS ALA THR LEU SEQRES 11 A 209 VAL CYS LEU ILE SER ASN PHE SER PRO SER GLY VAL THR SEQRES 12 A 209 VAL ALA TRP LYS ALA ASN GLY THR PRO ILE THR GLN GLY SEQRES 13 A 209 VAL ASP THR SER ASN PRO THR LYS GLU GLY ASN LYS PHE SEQRES 14 A 209 MET ALA SER SER PHE LEU HIS LEU THR SER ASP GLN TRP SEQRES 15 A 209 ARG SER HIS ASN SER PHE THR CYS GLN VAL THR HIS GLU SEQRES 16 A 209 GLY ASP THR VAL GLU LYS SER LEU SER PRO ALA GLU CYS SEQRES 17 A 209 LEU SEQRES 1 B 223 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 223 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 223 PHE THR PHE SER SER TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 B 223 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER TYR ILE SER SEQRES 5 B 223 ASP ASP GLY SER LEU LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 B 223 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 B 223 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 B 223 ALA VAL TYR TYR CYS ALA ARG HIS PRO TYR TRP TYR GLY SEQRES 9 B 223 GLY GLN LEU ASP LEU TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 B 223 VAL SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO SEQRES 11 B 223 LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL SEQRES 12 B 223 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 B 223 VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 B 223 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 B 223 THR LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 B 223 PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 B 223 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP SEQRES 18 B 223 CYS GLY SEQRES 1 C 110 MET SER LEU GLY SER LEU THR ILE ALA GLU PRO ALA MET SEQRES 2 C 110 ILE ALA GLU CYS LYS THR ARG THR GLU VAL PHE GLU ILE SEQRES 3 C 110 SER ARG ARG LEU ILE ASP ARG THR ASN ALA ASN PHE LEU SEQRES 4 C 110 VAL TRP PRO PRO CYS VAL GLU VAL GLN ARG CYS SER GLY SEQRES 5 C 110 CYS CYS ASN ASN ARG ASN VAL GLN CYS ARG PRO THR GLN SEQRES 6 C 110 VAL GLN LEU ARG PRO VAL GLN VAL ARG LYS ILE GLU ILE SEQRES 7 C 110 VAL ARG LYS LYS PRO ILE PHE LYS LYS ALA THR VAL THR SEQRES 8 C 110 LEU GLU ASP HIS LEU ALA CYS LYS CYS GLU THR VAL ALA SEQRES 9 C 110 ALA ALA ARG PRO VAL THR SEQRES 1 D 110 MET SER LEU GLY SER LEU THR ILE ALA GLU PRO ALA MET SEQRES 2 D 110 ILE ALA GLU CYS LYS THR ARG THR GLU VAL PHE GLU ILE SEQRES 3 D 110 SER ARG ARG LEU ILE ASP ARG THR ASN ALA ASN PHE LEU SEQRES 4 D 110 VAL TRP PRO PRO CYS VAL GLU VAL GLN ARG CYS SER GLY SEQRES 5 D 110 CYS CYS ASN ASN ARG ASN VAL GLN CYS ARG PRO THR GLN SEQRES 6 D 110 VAL GLN LEU ARG PRO VAL GLN VAL ARG LYS ILE GLU ILE SEQRES 7 D 110 VAL ARG LYS LYS PRO ILE PHE LYS LYS ALA THR VAL THR SEQRES 8 D 110 LEU GLU ASP HIS LEU ALA CYS LYS CYS GLU THR VAL ALA SEQRES 9 D 110 ALA ALA ARG PRO VAL THR SEQRES 1 H 223 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 223 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 223 PHE THR PHE SER SER TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 H 223 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER TYR ILE SER SEQRES 5 H 223 ASP ASP GLY SER LEU LYS TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 223 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 223 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 223 ALA VAL TYR TYR CYS ALA ARG HIS PRO TYR TRP TYR GLY SEQRES 9 H 223 GLY GLN LEU ASP LEU TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 H 223 VAL SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO SEQRES 11 H 223 LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL SEQRES 12 H 223 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 H 223 VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 H 223 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 H 223 THR LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 H 223 PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 H 223 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP SEQRES 18 H 223 CYS GLY SEQRES 1 L 209 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL ALA SEQRES 2 L 209 PRO GLY GLN THR ALA ARG ILE SER CYS SER GLY ASP SER SEQRES 3 L 209 LEU GLY SER TYR PHE VAL HIS TRP TYR GLN GLN LYS PRO SEQRES 4 L 209 GLY GLN ALA PRO VAL LEU VAL ILE TYR ASP ASP SER ASN SEQRES 5 L 209 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER ASN SEQRES 6 L 209 SER GLY ASN THR ALA THR LEU THR ILE SER GLY THR GLN SEQRES 7 L 209 ALA GLU ASP GLU ALA ASP TYR TYR CYS SER ALA PHE THR SEQRES 8 L 209 HIS ASN SER ASP VAL PHE GLY GLY GLY THR LYS LEU THR SEQRES 9 L 209 VAL LEU PRO LYS SER THR PRO THR LEU THR VAL PHE PRO SEQRES 10 L 209 PRO SER SER GLU GLU LEU LYS GLU ASN LYS ALA THR LEU SEQRES 11 L 209 VAL CYS LEU ILE SER ASN PHE SER PRO SER GLY VAL THR SEQRES 12 L 209 VAL ALA TRP LYS ALA ASN GLY THR PRO ILE THR GLN GLY SEQRES 13 L 209 VAL ASP THR SER ASN PRO THR LYS GLU GLY ASN LYS PHE SEQRES 14 L 209 MET ALA SER SER PHE LEU HIS LEU THR SER ASP GLN TRP SEQRES 15 L 209 ARG SER HIS ASN SER PHE THR CYS GLN VAL THR HIS GLU SEQRES 16 L 209 GLY ASP THR VAL GLU LYS SER LEU SER PRO ALA GLU CYS SEQRES 17 L 209 LEU FORMUL 7 HOH *327(H2 O) HELIX 1 1 SER A 26 TYR A 30 5 5 HELIX 2 2 GLN A 78 GLU A 82 5 5 HELIX 3 3 SER A 119 LYS A 124 1 6 HELIX 4 4 SER A 179 HIS A 185 1 7 HELIX 5 5 THR B 28 TYR B 32 5 5 HELIX 6 6 ARG B 87 THR B 91 5 5 HELIX 7 7 SER B 163 SER B 165 5 3 HELIX 8 8 PRO B 207 SER B 210 5 4 HELIX 9 9 SER C 26 ASP C 31 1 6 HELIX 10 10 THR H 28 TYR H 32 5 5 HELIX 11 11 ARG H 87 THR H 91 5 5 HELIX 12 12 SER H 163 SER H 165 5 3 HELIX 13 13 PRO H 207 SER H 210 5 4 HELIX 14 14 SER L 26 TYR L 30 5 5 HELIX 15 15 GLN L 78 GLU L 82 5 5 HELIX 16 16 SER L 119 LYS L 124 1 6 HELIX 17 17 SER L 179 HIS L 185 1 7 SHEET 1 A 5 SER A 9 VAL A 12 0 SHEET 2 A 5 THR A 101 VAL A 105 1 O THR A 104 N VAL A 10 SHEET 3 A 5 ALA A 83 SER A 88 -1 N ALA A 83 O LEU A 103 SHEET 4 A 5 HIS A 33 GLN A 37 -1 N GLN A 37 O ASP A 84 SHEET 5 A 5 VAL A 44 ILE A 47 -1 O ILE A 47 N TRP A 34 SHEET 1 B 3 ALA A 18 SER A 23 0 SHEET 2 B 3 THR A 69 ILE A 74 -1 O ALA A 70 N CYS A 22 SHEET 3 B 3 PHE A 61 SER A 66 -1 N SER A 62 O THR A 73 SHEET 1 C 4 THR A 112 PHE A 116 0 SHEET 2 C 4 LYS A 127 PHE A 137 -1 O LEU A 133 N THR A 114 SHEET 3 C 4 LYS A 168 THR A 178 -1 O LEU A 177 N ALA A 128 SHEET 4 C 4 VAL A 157 THR A 159 -1 N ASP A 158 O PHE A 174 SHEET 1 D 4 THR A 112 PHE A 116 0 SHEET 2 D 4 LYS A 127 PHE A 137 -1 O LEU A 133 N THR A 114 SHEET 3 D 4 LYS A 168 THR A 178 -1 O LEU A 177 N ALA A 128 SHEET 4 D 4 THR A 163 GLU A 165 -1 N GLU A 165 O LYS A 168 SHEET 1 E 4 THR A 151 ILE A 153 0 SHEET 2 E 4 THR A 143 ALA A 148 -1 N ALA A 148 O THR A 151 SHEET 3 E 4 PHE A 188 HIS A 194 -1 O GLN A 191 N ALA A 145 SHEET 4 E 4 ASP A 197 LEU A 203 -1 O VAL A 199 N VAL A 192 SHEET 1 F 4 GLN B 3 SER B 7 0 SHEET 2 F 4 LEU B 18 SER B 25 -1 O ALA B 23 N VAL B 5 SHEET 3 F 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 4 F 4 PHE B 68 ASP B 73 -1 N SER B 71 O TYR B 80 SHEET 1 G 6 LEU B 11 VAL B 12 0 SHEET 2 G 6 THR B 114 VAL B 118 1 O THR B 117 N VAL B 12 SHEET 3 G 6 ALA B 92 HIS B 99 -1 N TYR B 94 O THR B 114 SHEET 4 G 6 ALA B 33 GLN B 39 -1 N VAL B 37 O TYR B 95 SHEET 5 G 6 LEU B 45 ILE B 51 -1 O GLU B 46 N ARG B 38 SHEET 6 G 6 LYS B 58 TYR B 60 -1 O TYR B 59 N TYR B 50 SHEET 1 H 4 LEU B 11 VAL B 12 0 SHEET 2 H 4 THR B 114 VAL B 118 1 O THR B 117 N VAL B 12 SHEET 3 H 4 ALA B 92 HIS B 99 -1 N TYR B 94 O THR B 114 SHEET 4 H 4 LEU B 109 TRP B 110 -1 O LEU B 109 N ARG B 98 SHEET 1 I 4 SER B 127 LEU B 131 0 SHEET 2 I 4 MET B 142 TYR B 152 -1 O LEU B 148 N TYR B 129 SHEET 3 I 4 TYR B 182 PRO B 191 -1 O VAL B 188 N LEU B 145 SHEET 4 I 4 VAL B 170 THR B 172 -1 N HIS B 171 O SER B 187 SHEET 1 J 4 SER B 127 LEU B 131 0 SHEET 2 J 4 MET B 142 TYR B 152 -1 O LEU B 148 N TYR B 129 SHEET 3 J 4 TYR B 182 PRO B 191 -1 O VAL B 188 N LEU B 145 SHEET 4 J 4 VAL B 176 LEU B 177 -1 N VAL B 176 O THR B 183 SHEET 1 K 3 THR B 158 TRP B 161 0 SHEET 2 K 3 THR B 201 HIS B 206 -1 O ASN B 203 N THR B 160 SHEET 3 K 3 THR B 211 LYS B 216 -1 O VAL B 213 N VAL B 204 SHEET 1 L 2 LYS C 17 GLU C 24 0 SHEET 2 L 2 CYS C 43 SER C 50 -1 O VAL C 44 N PHE C 23 SHEET 1 M 3 PHE C 37 TRP C 40 0 SHEET 2 M 3 GLN C 59 GLU C 76 -1 O ILE C 75 N LEU C 38 SHEET 3 M 3 ILE C 83 GLU C 100 -1 O ALA C 87 N VAL C 72 SHEET 1 N 3 PHE C 37 TRP C 40 0 SHEET 2 N 3 GLN C 59 GLU C 76 -1 O ILE C 75 N LEU C 38 SHEET 3 N 3 GLU D 9 PRO D 10 1 O GLU D 9 N GLN C 71 SHEET 1 O 2 LYS D 17 GLU D 24 0 SHEET 2 O 2 CYS D 43 SER D 50 -1 O VAL D 44 N PHE D 23 SHEET 1 P 3 PHE D 37 TRP D 40 0 SHEET 2 P 3 GLN D 59 GLU D 76 -1 O ILE D 75 N LEU D 38 SHEET 3 P 3 ILE D 83 GLU D 100 -1 O ALA D 87 N VAL D 72 SHEET 1 Q 4 GLN H 3 SER H 7 0 SHEET 2 Q 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 Q 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 Q 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 R 6 LEU H 11 VAL H 12 0 SHEET 2 R 6 THR H 114 VAL H 118 1 O THR H 117 N VAL H 12 SHEET 3 R 6 ALA H 92 HIS H 99 -1 N TYR H 94 O THR H 114 SHEET 4 R 6 ALA H 33 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 R 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 R 6 LYS H 58 TYR H 60 -1 O TYR H 59 N TYR H 50 SHEET 1 S 4 LEU H 11 VAL H 12 0 SHEET 2 S 4 THR H 114 VAL H 118 1 O THR H 117 N VAL H 12 SHEET 3 S 4 ALA H 92 HIS H 99 -1 N TYR H 94 O THR H 114 SHEET 4 S 4 LEU H 109 TRP H 110 -1 O LEU H 109 N ARG H 98 SHEET 1 T 4 SER H 127 LEU H 131 0 SHEET 2 T 4 VAL H 143 TYR H 152 -1 O LEU H 148 N TYR H 129 SHEET 3 T 4 TYR H 182 VAL H 190 -1 O TYR H 182 N TYR H 152 SHEET 4 T 4 VAL H 170 THR H 172 -1 N HIS H 171 O SER H 187 SHEET 1 U 4 SER H 127 LEU H 131 0 SHEET 2 U 4 VAL H 143 TYR H 152 -1 O LEU H 148 N TYR H 129 SHEET 3 U 4 TYR H 182 VAL H 190 -1 O TYR H 182 N TYR H 152 SHEET 4 U 4 VAL H 176 LEU H 177 -1 N VAL H 176 O THR H 183 SHEET 1 V 3 THR H 158 TRP H 161 0 SHEET 2 V 3 THR H 201 HIS H 206 -1 O ASN H 203 N THR H 160 SHEET 3 V 3 THR H 211 LYS H 216 -1 O VAL H 213 N VAL H 204 SHEET 1 W 5 SER L 9 VAL L 12 0 SHEET 2 W 5 THR L 101 VAL L 105 1 O THR L 104 N VAL L 10 SHEET 3 W 5 ALA L 83 SER L 88 -1 N ALA L 83 O LEU L 103 SHEET 4 W 5 HIS L 33 GLN L 37 -1 N HIS L 33 O SER L 88 SHEET 5 W 5 VAL L 44 ILE L 47 -1 O ILE L 47 N TRP L 34 SHEET 1 X 3 ALA L 18 SER L 23 0 SHEET 2 X 3 THR L 69 ILE L 74 -1 O ALA L 70 N CYS L 22 SHEET 3 X 3 PHE L 61 SER L 66 -1 N SER L 62 O THR L 73 SHEET 1 Y 4 THR L 112 PHE L 116 0 SHEET 2 Y 4 LYS L 127 PHE L 137 -1 O LEU L 133 N THR L 114 SHEET 3 Y 4 PHE L 169 THR L 178 -1 O ALA L 171 N ILE L 134 SHEET 4 Y 4 VAL L 157 THR L 159 -1 N ASP L 158 O PHE L 174 SHEET 1 Z 4 THR L 112 PHE L 116 0 SHEET 2 Z 4 LYS L 127 PHE L 137 -1 O LEU L 133 N THR L 114 SHEET 3 Z 4 PHE L 169 THR L 178 -1 O ALA L 171 N ILE L 134 SHEET 4 Z 4 THR L 163 LYS L 164 -1 N THR L 163 O MET L 170 SHEET 1 AA 4 THR L 151 ILE L 153 0 SHEET 2 AA 4 THR L 143 ALA L 148 -1 N TRP L 146 O ILE L 153 SHEET 3 AA 4 PHE L 188 HIS L 194 -1 O GLN L 191 N ALA L 145 SHEET 4 AA 4 ASP L 197 LEU L 203 -1 O VAL L 199 N VAL L 192 SSBOND 1 CYS A 22 CYS A 87 1555 1555 2.04 SSBOND 2 CYS A 132 CYS A 190 1555 1555 2.03 SSBOND 3 CYS B 22 CYS B 96 1555 1555 2.04 SSBOND 4 CYS B 147 CYS B 202 1555 1555 2.03 SSBOND 5 CYS C 16 CYS C 60 1555 1555 2.03 SSBOND 6 CYS C 43 CYS D 52 1555 1555 2.04 SSBOND 7 CYS C 49 CYS C 97 1555 1555 2.03 SSBOND 8 CYS C 52 CYS D 43 1555 1555 2.03 SSBOND 9 CYS C 53 CYS C 99 1555 1555 2.04 SSBOND 10 CYS D 16 CYS D 60 1555 1555 2.04 SSBOND 11 CYS D 49 CYS D 97 1555 1555 2.04 SSBOND 12 CYS D 53 CYS D 99 1555 1555 2.03 SSBOND 13 CYS H 22 CYS H 96 1555 1555 2.04 SSBOND 14 CYS H 147 CYS H 202 1555 1555 2.06 SSBOND 15 CYS L 22 CYS L 87 1555 1555 2.05 SSBOND 16 CYS L 132 CYS L 190 1555 1555 2.03 CISPEP 1 LEU A 106 PRO A 107 0 7.80 CISPEP 2 SER A 138 PRO A 139 0 2.44 CISPEP 3 PHE B 153 PRO B 154 0 -5.56 CISPEP 4 GLU B 155 PRO B 156 0 0.63 CISPEP 5 TRP B 195 PRO B 196 0 2.91 CISPEP 6 TRP C 40 PRO C 41 0 -5.80 CISPEP 7 ILE D 7 ALA D 8 0 -5.07 CISPEP 8 TRP D 40 PRO D 41 0 -5.12 CISPEP 9 PHE H 153 PRO H 154 0 -4.88 CISPEP 10 GLU H 155 PRO H 156 0 0.10 CISPEP 11 LEU L 106 PRO L 107 0 9.07 CISPEP 12 SER L 138 PRO L 139 0 2.95 CRYST1 90.150 68.470 95.250 90.00 97.56 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011093 0.000000 0.001472 0.00000 SCALE2 0.000000 0.014605 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010591 0.00000