HEADER PEPTIDE BINDING PROTEIN 21-MAY-14 4QFO TITLE CRYSTAL STRUCTURE OF DIPEPTIDE BINDING PROTEIN FROM PSEUDOALTEROMONAS TITLE 2 SP. SM9913 IN COMPLEX WITH MET-LEU COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC TRANSPORTER PERIPLASMIC PEPTIDE-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PERIPLASMIC DIPEPTIDE-BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOALTEROMONAS; SOURCE 3 ORGANISM_TAXID: 234831; SOURCE 4 STRAIN: SM9913; SOURCE 5 GENE: DPPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DIPEPTIDE BINDING PROTEIN, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.Y.LI,Y.Z.ZHANG REVDAT 3 08-NOV-23 4QFO 1 REMARK SEQADV LINK REVDAT 2 17-OCT-18 4QFO 1 JRNL REVDAT 1 28-JAN-15 4QFO 0 JRNL AUTH C.Y.LI,X.L.CHEN,Q.L.QIN,P.WANG,W.X.ZHANG,B.B.XIE,H.N.SU, JRNL AUTH 2 X.Y.ZHANG,B.C.ZHOU,Y.Z.ZHANG JRNL TITL STRUCTURAL INSIGHTS INTO THE MULTISPECIFIC RECOGNITION OF JRNL TITL 2 DIPEPTIDES OF DEEP-SEA GRAM-NEGATIVE BACTERIUM JRNL TITL 3 PSEUDOALTEROMONAS SP. STRAIN SM9913 JRNL REF J. BACTERIOL. V. 197 1125 2015 JRNL REFN ESSN 1098-5530 JRNL PMID 25605306 JRNL DOI 10.1128/JB.02600-14 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.090 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 50905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7349 - 6.0268 1.00 2781 173 0.2127 0.2421 REMARK 3 2 6.0268 - 4.7880 0.99 2768 175 0.1587 0.1692 REMARK 3 3 4.7880 - 4.1841 1.00 2812 139 0.1228 0.1588 REMARK 3 4 4.1841 - 3.8021 0.99 2785 166 0.1246 0.1633 REMARK 3 5 3.8021 - 3.5299 0.99 2790 137 0.1440 0.1991 REMARK 3 6 3.5299 - 3.3219 0.98 2735 163 0.1435 0.1947 REMARK 3 7 3.3219 - 3.1557 0.98 2717 167 0.1557 0.1947 REMARK 3 8 3.1557 - 3.0184 0.98 2772 139 0.1593 0.2183 REMARK 3 9 3.0184 - 2.9023 0.96 2708 143 0.1641 0.2194 REMARK 3 10 2.9023 - 2.8022 0.96 2687 120 0.1703 0.2676 REMARK 3 11 2.8022 - 2.7146 0.95 2641 144 0.1669 0.2435 REMARK 3 12 2.7146 - 2.6370 0.95 2699 141 0.1708 0.2404 REMARK 3 13 2.6370 - 2.5676 0.94 2617 138 0.1731 0.2397 REMARK 3 14 2.5676 - 2.5050 0.91 2598 119 0.1643 0.2632 REMARK 3 15 2.5050 - 2.4481 0.91 2537 133 0.1707 0.2448 REMARK 3 16 2.4481 - 2.3960 0.91 2598 120 0.1768 0.2555 REMARK 3 17 2.3960 - 2.3481 0.90 2533 127 0.1918 0.2729 REMARK 3 18 2.3481 - 2.3038 0.89 2544 139 0.1896 0.2714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 40.33 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10530 REMARK 3 B22 (A**2) : -0.10530 REMARK 3 B33 (A**2) : 0.21070 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 8517 REMARK 3 ANGLE : 1.117 11582 REMARK 3 CHIRALITY : 0.081 1261 REMARK 3 PLANARITY : 0.005 1506 REMARK 3 DIHEDRAL : 14.281 3123 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QFO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000085995. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53350 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: 4QFL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M SODIUM PHOSPHATE MONOBASIC REMARK 280 MONOHYDRATE, 0.9M POTASSIUM PHOSPHATE DIBASIC, PH 8.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.28733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.64367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 LEU A 8 REMARK 465 LEU A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 LEU A 13 REMARK 465 VAL A 14 REMARK 465 GLY A 15 REMARK 465 CYS A 16 REMARK 465 ILE A 17 REMARK 465 ASP A 18 REMARK 465 SER A 19 REMARK 465 LYS A 20 REMARK 465 GLU A 21 REMARK 465 GLU A 22 REMARK 465 ILE A 23 REMARK 465 LEU A 24 REMARK 465 GLU A 25 REMARK 465 GLU A 26 REMARK 465 LYS A 27 REMARK 465 ASN A 28 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 HIS A 538 REMARK 465 HIS A 539 REMARK 465 HIS A 540 REMARK 465 HIS A 541 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 LYS B 3 REMARK 465 LEU B 4 REMARK 465 LEU B 5 REMARK 465 LEU B 6 REMARK 465 ALA B 7 REMARK 465 LEU B 8 REMARK 465 LEU B 9 REMARK 465 SER B 10 REMARK 465 LEU B 11 REMARK 465 SER B 12 REMARK 465 LEU B 13 REMARK 465 VAL B 14 REMARK 465 GLY B 15 REMARK 465 CYS B 16 REMARK 465 ILE B 17 REMARK 465 ASP B 18 REMARK 465 SER B 19 REMARK 465 LYS B 20 REMARK 465 GLU B 21 REMARK 465 GLU B 22 REMARK 465 ILE B 23 REMARK 465 LEU B 24 REMARK 465 GLU B 25 REMARK 465 GLU B 26 REMARK 465 LYS B 27 REMARK 465 ASN B 28 REMARK 465 HIS B 536 REMARK 465 HIS B 537 REMARK 465 HIS B 538 REMARK 465 HIS B 539 REMARK 465 HIS B 540 REMARK 465 HIS B 541 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 GOL B 603 O HOH B 910 2.04 REMARK 500 NH1 ARG B 124 O HOH B 919 2.07 REMARK 500 CB CYS A 262 O HOH A 911 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N GLY B 367 O HOH A 912 2544 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 77 -85.19 -130.64 REMARK 500 ASP A 137 11.81 -146.67 REMARK 500 SER A 159 -179.09 -174.34 REMARK 500 ALA A 183 42.22 -88.71 REMARK 500 HIS A 222 -59.55 -132.45 REMARK 500 ASP A 355 80.69 -159.06 REMARK 500 ALA A 366 94.71 -179.19 REMARK 500 ASN A 386 99.54 -165.35 REMARK 500 ASN A 388 81.94 -160.91 REMARK 500 LEU A 431 -160.38 -127.21 REMARK 500 LEU A 521 -86.03 -103.20 REMARK 500 GLU B 77 -77.45 -137.68 REMARK 500 LEU B 151 -60.23 -109.57 REMARK 500 ALA B 183 46.72 -90.52 REMARK 500 HIS B 222 -69.44 -128.29 REMARK 500 LYS B 260 6.95 80.53 REMARK 500 HIS B 267 64.69 36.07 REMARK 500 SER B 336 164.66 178.39 REMARK 500 ASP B 355 80.48 -161.58 REMARK 500 ALA B 366 84.48 -179.23 REMARK 500 ASN B 386 98.16 -168.79 REMARK 500 ASN B 388 81.73 -160.69 REMARK 500 LEU B 431 -156.69 -123.51 REMARK 500 LEU B 521 -84.10 -104.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR LINKED RESIDUES A 601 to 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR LINKED RESIDUES B 601 to 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QFK RELATED DB: PDB REMARK 900 RELATED ID: 4QFL RELATED DB: PDB REMARK 900 RELATED ID: 4QFN RELATED DB: PDB REMARK 900 RELATED ID: 4QFP RELATED DB: PDB DBREF 4QFO A 1 535 UNP A7Y7W1 A7Y7W1_PSEU9 1 535 DBREF 4QFO B 1 535 UNP A7Y7W1 A7Y7W1_PSEU9 1 535 SEQADV 4QFO HIS A 536 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS A 537 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS A 538 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS A 539 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS A 540 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS A 541 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS B 536 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS B 537 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS B 538 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS B 539 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS B 540 UNP A7Y7W1 EXPRESSION TAG SEQADV 4QFO HIS B 541 UNP A7Y7W1 EXPRESSION TAG SEQRES 1 A 541 MET HIS LYS LEU LEU LEU ALA LEU LEU SER LEU SER LEU SEQRES 2 A 541 VAL GLY CYS ILE ASP SER LYS GLU GLU ILE LEU GLU GLU SEQRES 3 A 541 LYS ASN GLN GLY LEU VAL TYR CYS ALA GLU ALA ASN PRO SEQRES 4 A 541 VAL SER PHE ASN PRO GLN VAL THR THR THR GLY SER THR SEQRES 5 A 541 ILE ASP ILE ILE ALA ASN GLN LEU TYR ASP ARG LEU ILE SEQRES 6 A 541 SER ILE ASP PRO VAL THR ALA GLU PHE LYS SER GLU LEU SEQRES 7 A 541 ALA THR ASP TRP LYS ILE SER LYS ASP GLY LYS SER VAL SEQRES 8 A 541 THR PHE THR LEU ARG LYS GLY VAL LYS PHE HIS THR THR SEQRES 9 A 541 ALA TYR PHE THR PRO THR ARG GLU PHE ASN ALA ASP ASP SEQRES 10 A 541 VAL ILE PHE THR PHE SER ARG LEU PHE ASP VAL TYR ASN SEQRES 11 A 541 PRO TYR HIS PHE VAL GLY ASP ALA ASN TYR PRO TYR PHE SEQRES 12 A 541 GLN SER VAL GLY ILE ASP GLN LEU ILE ARG LYS ILE VAL SEQRES 13 A 541 ARG VAL SER ASP HIS GLN VAL ARG PHE GLU LEU PHE ASN SEQRES 14 A 541 ALA GLU SER SER PHE LEU ALA ASN MET ALA THR ASP PHE SEQRES 15 A 541 ALA VAL VAL LEU SER LYS GLU TYR ALA MET ALA LEU LYS SEQRES 16 A 541 ALA ASN ASN GLN GLU ASN LEU PHE ASP GLN TYR PRO VAL SEQRES 17 A 541 GLY THR GLY PRO TYR ILE TYR LYS GLU TYR ARG ARG ASP SEQRES 18 A 541 HIS LEU VAL ARG PHE TYR LYS ASN ALA ASP TYR TRP LYS SEQRES 19 A 541 HIS GLU VAL ALA LEU GLU GLN LEU VAL TYR ASP ILE THR SEQRES 20 A 541 PRO ASN GLY THR THR ARG ILE ALA LYS ILE LEU THR LYS SEQRES 21 A 541 GLU CYS ASP VAL THR ALA HIS PRO SER SER ALA GLN LEU SEQRES 22 A 541 SER ILE LEU ALA GLN ARG ASP ASP ILE ASN VAL GLU ARG SEQRES 23 A 541 GLU THR ASN LEU ASN ILE GLY TYR TRP ALA PHE ASN THR SEQRES 24 A 541 GLU ARG PRO PRO PHE ASP ASN LEU LYS VAL ARG GLN ALA SEQRES 25 A 541 LEU VAL HIS ALA ILE ASP ILE GLU LYS ILE MET GLN ALA SEQRES 26 A 541 VAL TYR TYR GLY ASN GLY LEU ARG ALA ARG SER ILE LEU SEQRES 27 A 541 PRO PRO THR SER TRP ALA PHE GLU PRO GLN LYS ASN MET SEQRES 28 A 541 PRO ILE PHE ASP PRO GLN LEU ALA LYS LYS LEU LEU THR SEQRES 29 A 541 GLU ALA GLY TYR GLU LYS GLY PHE ASP MET SER ILE TRP SEQRES 30 A 541 ALA MET PRO VAL SER ARG ILE TYR ASN PRO ASN ALA ARG SEQRES 31 A 541 LYS MET ALA GLU LEU MET GLN SER ASP LEU ARG LYS ILE SEQRES 32 A 541 GLY VAL ASN VAL ASN ILE VAL GLU TYR GLU TRP ASN THR SEQRES 33 A 541 PHE ILE GLN ARG ILE GLY GLU HIS ARG HIS ASP SER VAL SEQRES 34 A 541 LEU LEU GLY TRP ALA ALA ASP THR PRO ASP PRO ASP ASN SEQRES 35 A 541 PHE PHE SER PRO LEU LEU SER CYS THR ALA THR PHE SER SEQRES 36 A 541 GLY LYS ASN PRO ALA ASN TRP CYS ASN PRO GLU PHE ASP SEQRES 37 A 541 LEU LEU LEU THR LYS ALA LEU ASP THR THR ASP LEU ASN SEQRES 38 A 541 LEU ARG LYS GLN TYR TYR ASP ALA ALA GLN SER MET ILE SEQRES 39 A 541 ILE GLU GLN LEU PRO LEU TYR PRO ILE ALA HIS GLY MET SEQRES 40 A 541 ARG PHE GLN ALA SER SER ALA ASP VAL GLU GLY ILE THR SEQRES 41 A 541 LEU GLY PRO PHE GLY ALA ILE SER LEU ALA ASN ALA ARG SEQRES 42 A 541 LYS LYS HIS HIS HIS HIS HIS HIS SEQRES 1 B 541 MET HIS LYS LEU LEU LEU ALA LEU LEU SER LEU SER LEU SEQRES 2 B 541 VAL GLY CYS ILE ASP SER LYS GLU GLU ILE LEU GLU GLU SEQRES 3 B 541 LYS ASN GLN GLY LEU VAL TYR CYS ALA GLU ALA ASN PRO SEQRES 4 B 541 VAL SER PHE ASN PRO GLN VAL THR THR THR GLY SER THR SEQRES 5 B 541 ILE ASP ILE ILE ALA ASN GLN LEU TYR ASP ARG LEU ILE SEQRES 6 B 541 SER ILE ASP PRO VAL THR ALA GLU PHE LYS SER GLU LEU SEQRES 7 B 541 ALA THR ASP TRP LYS ILE SER LYS ASP GLY LYS SER VAL SEQRES 8 B 541 THR PHE THR LEU ARG LYS GLY VAL LYS PHE HIS THR THR SEQRES 9 B 541 ALA TYR PHE THR PRO THR ARG GLU PHE ASN ALA ASP ASP SEQRES 10 B 541 VAL ILE PHE THR PHE SER ARG LEU PHE ASP VAL TYR ASN SEQRES 11 B 541 PRO TYR HIS PHE VAL GLY ASP ALA ASN TYR PRO TYR PHE SEQRES 12 B 541 GLN SER VAL GLY ILE ASP GLN LEU ILE ARG LYS ILE VAL SEQRES 13 B 541 ARG VAL SER ASP HIS GLN VAL ARG PHE GLU LEU PHE ASN SEQRES 14 B 541 ALA GLU SER SER PHE LEU ALA ASN MET ALA THR ASP PHE SEQRES 15 B 541 ALA VAL VAL LEU SER LYS GLU TYR ALA MET ALA LEU LYS SEQRES 16 B 541 ALA ASN ASN GLN GLU ASN LEU PHE ASP GLN TYR PRO VAL SEQRES 17 B 541 GLY THR GLY PRO TYR ILE TYR LYS GLU TYR ARG ARG ASP SEQRES 18 B 541 HIS LEU VAL ARG PHE TYR LYS ASN ALA ASP TYR TRP LYS SEQRES 19 B 541 HIS GLU VAL ALA LEU GLU GLN LEU VAL TYR ASP ILE THR SEQRES 20 B 541 PRO ASN GLY THR THR ARG ILE ALA LYS ILE LEU THR LYS SEQRES 21 B 541 GLU CYS ASP VAL THR ALA HIS PRO SER SER ALA GLN LEU SEQRES 22 B 541 SER ILE LEU ALA GLN ARG ASP ASP ILE ASN VAL GLU ARG SEQRES 23 B 541 GLU THR ASN LEU ASN ILE GLY TYR TRP ALA PHE ASN THR SEQRES 24 B 541 GLU ARG PRO PRO PHE ASP ASN LEU LYS VAL ARG GLN ALA SEQRES 25 B 541 LEU VAL HIS ALA ILE ASP ILE GLU LYS ILE MET GLN ALA SEQRES 26 B 541 VAL TYR TYR GLY ASN GLY LEU ARG ALA ARG SER ILE LEU SEQRES 27 B 541 PRO PRO THR SER TRP ALA PHE GLU PRO GLN LYS ASN MET SEQRES 28 B 541 PRO ILE PHE ASP PRO GLN LEU ALA LYS LYS LEU LEU THR SEQRES 29 B 541 GLU ALA GLY TYR GLU LYS GLY PHE ASP MET SER ILE TRP SEQRES 30 B 541 ALA MET PRO VAL SER ARG ILE TYR ASN PRO ASN ALA ARG SEQRES 31 B 541 LYS MET ALA GLU LEU MET GLN SER ASP LEU ARG LYS ILE SEQRES 32 B 541 GLY VAL ASN VAL ASN ILE VAL GLU TYR GLU TRP ASN THR SEQRES 33 B 541 PHE ILE GLN ARG ILE GLY GLU HIS ARG HIS ASP SER VAL SEQRES 34 B 541 LEU LEU GLY TRP ALA ALA ASP THR PRO ASP PRO ASP ASN SEQRES 35 B 541 PHE PHE SER PRO LEU LEU SER CYS THR ALA THR PHE SER SEQRES 36 B 541 GLY LYS ASN PRO ALA ASN TRP CYS ASN PRO GLU PHE ASP SEQRES 37 B 541 LEU LEU LEU THR LYS ALA LEU ASP THR THR ASP LEU ASN SEQRES 38 B 541 LEU ARG LYS GLN TYR TYR ASP ALA ALA GLN SER MET ILE SEQRES 39 B 541 ILE GLU GLN LEU PRO LEU TYR PRO ILE ALA HIS GLY MET SEQRES 40 B 541 ARG PHE GLN ALA SER SER ALA ASP VAL GLU GLY ILE THR SEQRES 41 B 541 LEU GLY PRO PHE GLY ALA ILE SER LEU ALA ASN ALA ARG SEQRES 42 B 541 LYS LYS HIS HIS HIS HIS HIS HIS HET MET A 601 8 HET LEU A 602 9 HET GOL A 603 6 HET MET B 601 8 HET LEU B 602 9 HET GOL B 603 6 HETNAM MET METHIONINE HETNAM LEU LEUCINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MET 2(C5 H11 N O2 S) FORMUL 4 LEU 2(C6 H13 N O2) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 9 HOH *433(H2 O) HELIX 1 1 ASN A 43 THR A 47 5 5 HELIX 2 2 THR A 49 TYR A 61 1 13 HELIX 3 3 ASN A 114 ASP A 127 1 14 HELIX 4 4 ASN A 130 VAL A 135 5 6 HELIX 5 5 TYR A 140 VAL A 146 1 7 HELIX 6 6 GLY A 147 GLN A 150 5 4 HELIX 7 7 SER A 173 MET A 178 1 6 HELIX 8 8 SER A 187 ALA A 196 1 10 HELIX 9 9 ASN A 197 ASN A 198 5 2 HELIX 10 10 GLN A 199 PHE A 203 5 5 HELIX 11 11 ASN A 249 THR A 259 1 11 HELIX 12 12 SER A 269 ALA A 271 5 3 HELIX 13 13 GLN A 272 ARG A 279 1 8 HELIX 14 14 ASN A 306 ALA A 316 1 11 HELIX 15 15 ASP A 318 VAL A 326 1 9 HELIX 16 16 ASP A 355 ALA A 366 1 12 HELIX 17 17 ASN A 388 LYS A 402 1 15 HELIX 18 18 GLU A 413 GLU A 423 1 11 HELIX 19 19 ASP A 439 PHE A 443 5 5 HELIX 20 20 PHE A 444 SER A 449 1 6 HELIX 21 21 SER A 449 SER A 455 1 7 HELIX 22 22 ASN A 464 ASP A 476 1 13 HELIX 23 23 ASP A 479 LEU A 498 1 20 HELIX 24 24 ASN B 43 THR B 47 5 5 HELIX 25 25 THR B 49 TYR B 61 1 13 HELIX 26 26 ASN B 114 ASP B 127 1 14 HELIX 27 27 ASN B 130 VAL B 135 5 6 HELIX 28 28 TYR B 140 VAL B 146 1 7 HELIX 29 29 GLY B 147 GLN B 150 5 4 HELIX 30 30 SER B 173 MET B 178 1 6 HELIX 31 31 SER B 187 ASN B 197 1 11 HELIX 32 32 ASN B 198 PHE B 203 5 6 HELIX 33 33 ASN B 249 THR B 259 1 11 HELIX 34 34 SER B 269 ARG B 279 1 11 HELIX 35 35 ASN B 306 ALA B 316 1 11 HELIX 36 36 ASP B 318 VAL B 326 1 9 HELIX 37 37 ASP B 355 ALA B 366 1 12 HELIX 38 38 ASN B 388 LYS B 402 1 15 HELIX 39 39 GLU B 413 GLU B 423 1 11 HELIX 40 40 ASP B 439 PHE B 443 5 5 HELIX 41 41 PHE B 444 SER B 449 1 6 HELIX 42 42 SER B 449 SER B 455 1 7 HELIX 43 43 ASN B 464 ASP B 476 1 13 HELIX 44 44 ASP B 479 LEU B 498 1 20 SHEET 1 A 7 TYR A 213 ARG A 219 0 SHEET 2 A 7 LEU A 223 LYS A 228 -1 O ARG A 225 N GLU A 217 SHEET 3 A 7 GLN A 241 ILE A 246 -1 O TYR A 244 N VAL A 224 SHEET 4 A 7 GLY A 30 ALA A 35 1 N LEU A 31 O VAL A 243 SHEET 5 A 7 VAL A 264 ALA A 266 1 O VAL A 264 N CYS A 34 SHEET 6 A 7 ARG A 508 SER A 513 -1 O ALA A 511 N THR A 265 SHEET 7 A 7 ILE A 282 GLU A 287 -1 N ASN A 283 O SER A 512 SHEET 1 B 2 ILE A 65 ILE A 67 0 SHEET 2 B 2 PHE A 74 SER A 76 -1 O LYS A 75 N SER A 66 SHEET 1 C 4 ALA A 79 ILE A 84 0 SHEET 2 C 4 SER A 90 LEU A 95 -1 O THR A 94 N ASP A 81 SHEET 3 C 4 GLN A 162 LEU A 167 -1 O VAL A 163 N PHE A 93 SHEET 4 C 4 ILE A 152 SER A 159 -1 N LYS A 154 O GLU A 166 SHEET 1 D 6 LEU A 332 ARG A 333 0 SHEET 2 D 6 LEU A 500 HIS A 505 -1 O HIS A 505 N LEU A 332 SHEET 3 D 6 ASN A 291 PHE A 297 -1 N GLY A 293 O ILE A 503 SHEET 4 D 6 SER A 428 ALA A 434 -1 O LEU A 431 N TYR A 294 SHEET 5 D 6 PHE A 372 ALA A 378 1 N TRP A 377 O LEU A 430 SHEET 6 D 6 VAL A 405 VAL A 410 1 O VAL A 410 N ALA A 378 SHEET 1 E 2 VAL A 516 GLU A 517 0 SHEET 2 E 2 ARG A 533 LYS A 534 -1 O ARG A 533 N GLU A 517 SHEET 1 F 7 TYR B 213 ARG B 219 0 SHEET 2 F 7 LEU B 223 LYS B 228 -1 O ARG B 225 N GLU B 217 SHEET 3 F 7 GLN B 241 ILE B 246 -1 O TYR B 244 N VAL B 224 SHEET 4 F 7 GLY B 30 ALA B 35 1 N LEU B 31 O VAL B 243 SHEET 5 F 7 VAL B 264 THR B 265 1 O VAL B 264 N CYS B 34 SHEET 6 F 7 ARG B 508 SER B 513 -1 O ALA B 511 N THR B 265 SHEET 7 F 7 ILE B 282 GLU B 287 -1 N ASN B 283 O SER B 512 SHEET 1 G 2 ILE B 65 ILE B 67 0 SHEET 2 G 2 PHE B 74 SER B 76 -1 O LYS B 75 N SER B 66 SHEET 1 H 4 ALA B 79 ILE B 84 0 SHEET 2 H 4 SER B 90 LEU B 95 -1 O THR B 94 N ASP B 81 SHEET 3 H 4 GLN B 162 LEU B 167 -1 O VAL B 163 N PHE B 93 SHEET 4 H 4 ILE B 152 SER B 159 -1 N LYS B 154 O GLU B 166 SHEET 1 I 6 LEU B 332 ARG B 333 0 SHEET 2 I 6 LEU B 500 HIS B 505 -1 O HIS B 505 N LEU B 332 SHEET 3 I 6 ASN B 291 PHE B 297 -1 N GLY B 293 O ALA B 504 SHEET 4 I 6 SER B 428 ALA B 434 -1 O VAL B 429 N ALA B 296 SHEET 5 I 6 ASP B 373 ALA B 378 1 N TRP B 377 O SER B 428 SHEET 6 I 6 ASN B 406 VAL B 410 1 O VAL B 410 N ALA B 378 SHEET 1 J 2 VAL B 516 GLU B 517 0 SHEET 2 J 2 ARG B 533 LYS B 534 -1 O ARG B 533 N GLU B 517 SSBOND 1 CYS A 34 CYS A 262 1555 1555 2.07 SSBOND 2 CYS A 450 CYS A 463 1555 1555 2.05 SSBOND 3 CYS B 34 CYS B 262 1555 1555 2.07 SSBOND 4 CYS B 450 CYS B 463 1555 1555 2.05 LINK C MET A 601 N LEU A 602 1555 1555 1.32 LINK C MET B 601 N LEU B 602 1555 1555 1.32 CISPEP 1 PRO A 302 PRO A 303 0 2.39 CISPEP 2 ALA A 366 GLY A 367 0 -26.22 CISPEP 3 PRO B 302 PRO B 303 0 -0.82 CISPEP 4 ALA B 366 GLY B 367 0 -5.05 SITE 1 AC1 10 TYR A 33 THR A 265 ALA A 266 HIS A 267 SITE 2 AC1 10 ILE A 384 ARG A 508 PHE A 509 GLN A 510 SITE 3 AC1 10 ILE A 527 HOH A 721 SITE 1 AC2 11 TYR B 33 THR B 265 ALA B 266 HIS B 267 SITE 2 AC2 11 ILE B 384 ARG B 508 PHE B 509 GLN B 510 SITE 3 AC2 11 ILE B 527 HOH B 723 HOH B 910 SITE 1 AC3 8 THR A 48 GLY A 50 ARG A 383 TYR A 385 SITE 2 AC3 8 ILE A 418 TRP A 433 ALA A 434 ASP A 436 SITE 1 AC4 9 THR B 48 GLY B 50 ASP B 54 ARG B 383 SITE 2 AC4 9 TYR B 385 ILE B 418 TRP B 433 ALA B 434 SITE 3 AC4 9 ASP B 436 CRYST1 100.403 100.403 106.931 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009960 0.005750 0.000000 0.00000 SCALE2 0.000000 0.011501 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009352 0.00000