HEADER OXIDOREDUCTASE 13-JUN-14 4QLX TITLE CRYSTAL STRUCTURE OF CLA-ER WITH PRODUCT BINDING COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROREDUCTASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CLA-ER; COMPND 5 EC: 1.-.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS PLANTARUM; SOURCE 3 ORGANISM_TAXID: 1590; SOURCE 4 STRAIN: AKU 1009A; SOURCE 5 GENE: CLA-ER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NADH OXIDASE/FLAVIN REDUCTASE FAMILY, ENONE REDUCTASE, KETOC, FMN, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.HOU,T.MIYAKAWA,M.TANOKURA REVDAT 4 08-NOV-23 4QLX 1 REMARK REVDAT 3 24-AUG-22 4QLX 1 JRNL REMARK SEQADV REVDAT 2 11-MAR-15 4QLX 1 JRNL REVDAT 1 25-FEB-15 4QLX 0 JRNL AUTH F.HOU,T.MIYAKAWA,N.KITAMURA,M.TAKEUCHI,S.B.PARK,S.KISHINO, JRNL AUTH 2 J.OGAWA,M.TANOKURA JRNL TITL STRUCTURE AND REACTION MECHANISM OF A NOVEL ENONE REDUCTASE. JRNL REF FEBS J. V. 282 1526 2015 JRNL REFN ISSN 1742-464X JRNL PMID 25702712 JRNL DOI 10.1111/FEBS.13239 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 32707 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.150 REMARK 3 FREE R VALUE TEST SET COUNT : 2012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9026 - 4.6808 1.00 2319 153 0.1732 0.1941 REMARK 3 2 4.6808 - 3.7232 1.00 2247 146 0.1486 0.1828 REMARK 3 3 3.7232 - 3.2549 1.00 2211 145 0.1715 0.1840 REMARK 3 4 3.2549 - 2.9584 1.00 2182 139 0.2016 0.2940 REMARK 3 5 2.9584 - 2.7469 1.00 2214 139 0.1986 0.2709 REMARK 3 6 2.7469 - 2.5853 1.00 2181 153 0.2014 0.2470 REMARK 3 7 2.5853 - 2.4561 1.00 2174 140 0.1910 0.2056 REMARK 3 8 2.4561 - 2.3493 1.00 2162 142 0.2012 0.2860 REMARK 3 9 2.3493 - 2.2590 1.00 2169 141 0.2003 0.2498 REMARK 3 10 2.2590 - 2.1812 1.00 2199 144 0.2018 0.2606 REMARK 3 11 2.1812 - 2.1130 1.00 2156 145 0.1978 0.2485 REMARK 3 12 2.1130 - 2.0527 1.00 2143 135 0.2137 0.2724 REMARK 3 13 2.0527 - 1.9987 1.00 2198 138 0.2332 0.2771 REMARK 3 14 1.9987 - 1.9500 1.00 2140 152 0.2489 0.3092 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3545 REMARK 3 ANGLE : 1.063 4812 REMARK 3 CHIRALITY : 0.043 528 REMARK 3 PLANARITY : 0.005 615 REMARK 3 DIHEDRAL : 14.561 1296 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086220. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NE3A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32720 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.080 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.490 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4QLY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CACODYLATE, 200MM NACL, REMARK 280 2.0M AMMONIUM SULFATE, PH 6.8, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.74850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 98.74850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.46650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.42500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.46650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.42500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 98.74850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.46650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 34.42500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 98.74850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.46650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 34.42500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 480 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 533 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 ALA B 4 REMARK 465 VAL B 5 REMARK 465 LYS B 6 REMARK 465 ASN B 7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 2 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 200 O HOH B 472 2.13 REMARK 500 O HOH B 414 O HOH B 482 2.13 REMARK 500 O HOH B 515 O HOH B 536 2.16 REMARK 500 O HOH A 464 O HOH A 495 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 117 O HOH B 435 4555 1.95 REMARK 500 OE1 GLU A 110 O HOH B 439 8445 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 5 69.65 -102.70 REMARK 500 ASN A 52 29.88 49.93 REMARK 500 SER A 55 44.13 -81.83 REMARK 500 ASP A 62 18.66 -146.26 REMARK 500 TYR A 162 -164.81 -100.93 REMARK 500 VAL A 189 -66.32 -124.13 REMARK 500 SER B 55 34.50 -77.66 REMARK 500 ASP B 62 23.39 -144.07 REMARK 500 TYR B 162 -168.56 -105.94 REMARK 500 VAL B 189 -60.34 -120.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 4 VAL A 5 33.43 REMARK 500 VAL A 5 LYS A 6 141.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KTC A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KTC B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QLY RELATED DB: PDB DBREF 4QLX A 1 217 UNP U6C5W9 U6C5W9_LACPN 1 217 DBREF 4QLX B 1 217 UNP U6C5W9 U6C5W9_LACPN 1 217 SEQADV 4QLX GLY A -1 UNP U6C5W9 EXPRESSION TAG SEQADV 4QLX PRO A 0 UNP U6C5W9 EXPRESSION TAG SEQADV 4QLX GLY B -1 UNP U6C5W9 EXPRESSION TAG SEQADV 4QLX PRO B 0 UNP U6C5W9 EXPRESSION TAG SEQRES 1 A 219 GLY PRO MET SER GLU ALA VAL LYS ASN LEU VAL ASN ASN SEQRES 2 A 219 ASP LEU ALA ASP VAL MET PHE ASN ARG HIS SER VAL ARG SEQRES 3 A 219 GLN PHE ASP PRO ASN VAL LYS ILE GLY ARG ASP GLU LEU SEQRES 4 A 219 GLN LYS MET ILE ALA GLU ALA ALA THR ALA PRO SER ALA SEQRES 5 A 219 CYS ASN LEU GLN SER TRP HIS PHE VAL VAL VAL ASP THR SEQRES 6 A 219 PRO GLU ALA LYS ALA LYS PHE LYS GLN ALA VAL MET LYS SEQRES 7 A 219 PHE ASN TYR PRO GLN VAL ASP SER ALA SER ALA ILE VAL SEQRES 8 A 219 PHE ILE ALA GLY ASP THR GLN SER HIS TYR VAL TYR ARG SEQRES 9 A 219 ASP VAL TRP ASN LYS VAL TYR GLU ASP GLY ASN ILE THR SEQRES 10 A 219 LYS GLU ARG LEU ASP GLN ILE LEU GLY THR PHE LEU PRO SEQRES 11 A 219 LEU TYR GLU ASN ALA THR PRO ASP PHE LEU LYS PHE ASP SEQRES 12 A 219 ALA THR ILE ASP CYS SER VAL VAL GLY MET GLN LEU LEU SEQRES 13 A 219 LEU VAL ALA ARG ALA HIS GLY TYR ASP ALA ASN ALA PHE SEQRES 14 A 219 SER GLY ILE ASP PHE GLU LYS MET ILE PRO THR LEU GLY SEQRES 15 A 219 LEU ASP PRO LYS ARG TYR VAL PRO VAL MET GLY ILE ALA SEQRES 16 A 219 ILE GLY LYS ALA ALA GLN GLU PRO LEU HIS THR THR ARG SEQRES 17 A 219 TYR ASP ALA LYS THR GLN THR ASP PHE LEU ALA SEQRES 1 B 219 GLY PRO MET SER GLU ALA VAL LYS ASN LEU VAL ASN ASN SEQRES 2 B 219 ASP LEU ALA ASP VAL MET PHE ASN ARG HIS SER VAL ARG SEQRES 3 B 219 GLN PHE ASP PRO ASN VAL LYS ILE GLY ARG ASP GLU LEU SEQRES 4 B 219 GLN LYS MET ILE ALA GLU ALA ALA THR ALA PRO SER ALA SEQRES 5 B 219 CYS ASN LEU GLN SER TRP HIS PHE VAL VAL VAL ASP THR SEQRES 6 B 219 PRO GLU ALA LYS ALA LYS PHE LYS GLN ALA VAL MET LYS SEQRES 7 B 219 PHE ASN TYR PRO GLN VAL ASP SER ALA SER ALA ILE VAL SEQRES 8 B 219 PHE ILE ALA GLY ASP THR GLN SER HIS TYR VAL TYR ARG SEQRES 9 B 219 ASP VAL TRP ASN LYS VAL TYR GLU ASP GLY ASN ILE THR SEQRES 10 B 219 LYS GLU ARG LEU ASP GLN ILE LEU GLY THR PHE LEU PRO SEQRES 11 B 219 LEU TYR GLU ASN ALA THR PRO ASP PHE LEU LYS PHE ASP SEQRES 12 B 219 ALA THR ILE ASP CYS SER VAL VAL GLY MET GLN LEU LEU SEQRES 13 B 219 LEU VAL ALA ARG ALA HIS GLY TYR ASP ALA ASN ALA PHE SEQRES 14 B 219 SER GLY ILE ASP PHE GLU LYS MET ILE PRO THR LEU GLY SEQRES 15 B 219 LEU ASP PRO LYS ARG TYR VAL PRO VAL MET GLY ILE ALA SEQRES 16 B 219 ILE GLY LYS ALA ALA GLN GLU PRO LEU HIS THR THR ARG SEQRES 17 B 219 TYR ASP ALA LYS THR GLN THR ASP PHE LEU ALA HET FMN A 301 31 HET KTC A 302 21 HET CL A 303 1 HET CL A 304 1 HET CL A 305 1 HET CL A 306 1 HET KTC B 301 21 HET FMN B 302 31 HET CL B 303 1 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM KTC 10-OXOOCTADECANOIC ACID HETNAM CL CHLORIDE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 KTC 2(C18 H34 O3) FORMUL 5 CL 5(CL 1-) FORMUL 12 HOH *280(H2 O) HELIX 1 1 ASP A 12 ASN A 19 1 8 HELIX 2 2 GLY A 33 ALA A 45 1 13 HELIX 3 3 SER A 49 LEU A 53 5 5 HELIX 4 4 THR A 63 LYS A 71 1 9 HELIX 5 5 GLN A 72 VAL A 74 5 3 HELIX 6 6 MET A 75 PHE A 77 5 3 HELIX 7 7 ASN A 78 ALA A 85 1 8 HELIX 8 8 GLN A 96 TYR A 99 5 4 HELIX 9 9 VAL A 100 ASP A 111 1 12 HELIX 10 10 THR A 115 ASN A 132 1 18 HELIX 11 11 THR A 134 HIS A 160 1 27 HELIX 12 12 LYS A 174 GLY A 180 1 7 HELIX 13 13 ASP A 208 THR A 213 5 6 HELIX 14 14 ASP B 12 ASN B 19 1 8 HELIX 15 15 GLY B 33 ALA B 45 1 13 HELIX 16 16 SER B 49 LEU B 53 5 5 HELIX 17 17 THR B 63 GLN B 72 1 10 HELIX 18 18 ALA B 73 VAL B 74 5 2 HELIX 19 19 MET B 75 PHE B 77 5 3 HELIX 20 20 ASN B 78 ALA B 85 1 8 HELIX 21 21 GLN B 96 TYR B 99 5 4 HELIX 22 22 VAL B 100 ASP B 111 1 12 HELIX 23 23 THR B 115 ASN B 132 1 18 HELIX 24 24 THR B 134 HIS B 160 1 27 HELIX 25 25 LYS B 174 GLY B 180 1 7 HELIX 26 26 ASP B 208 THR B 213 5 6 SHEET 1 A 4 TRP A 56 VAL A 61 0 SHEET 2 A 4 ALA A 87 ASP A 94 -1 O ILE A 88 N VAL A 61 SHEET 3 A 4 TYR A 186 GLY A 195 -1 O VAL A 187 N GLY A 93 SHEET 4 A 4 ASP A 163 PHE A 167 -1 N PHE A 167 O GLY A 191 SHEET 1 B 4 TRP B 56 VAL B 61 0 SHEET 2 B 4 ALA B 87 ASP B 94 -1 O ILE B 88 N VAL B 61 SHEET 3 B 4 TYR B 186 GLY B 195 -1 O VAL B 187 N GLY B 93 SHEET 4 B 4 ASP B 163 PHE B 167 -1 N PHE B 167 O GLY B 191 SITE 1 AC1 21 ARG A 20 HIS A 21 SER A 22 ARG A 24 SITE 2 AC1 21 ASN A 78 GLN A 81 ASN A 165 ALA A 166 SITE 3 AC1 21 PHE A 167 SER A 168 GLY A 169 THR A 204 SITE 4 AC1 21 ARG A 206 HOH A 406 HOH A 421 PRO B 48 SITE 5 AC1 21 SER B 49 ALA B 50 ASN B 52 ILE B 144 SITE 6 AC1 21 KTC B 301 SITE 1 AC2 13 CYS A 51 TRP A 105 ARG A 118 ILE A 122 SITE 2 AC2 13 PHE A 126 LEU A 129 TYR A 130 PHE A 137 SITE 3 AC2 13 HOH A 424 ARG B 24 SER B 168 FMN B 302 SITE 4 AC2 13 HOH B 493 SITE 1 AC3 2 MET A 1 SER A 2 SITE 1 AC4 2 GLY A 33 GLU A 36 SITE 1 AC5 1 LYS A 76 SITE 1 AC6 1 ARG A 102 SITE 1 AC7 14 ARG A 24 SER A 168 ILE A 170 PHE A 172 SITE 2 AC7 14 LEU A 202 FMN A 301 HOH A 506 ALA B 50 SITE 3 AC7 14 CYS B 51 ARG B 118 PHE B 126 LEU B 129 SITE 4 AC7 14 PHE B 137 HOH B 494 SITE 1 AC8 24 PRO A 48 SER A 49 ALA A 50 ASN A 52 SITE 2 AC8 24 ILE A 144 KTC A 302 HOH A 488 ARG B 20 SITE 3 AC8 24 HIS B 21 SER B 22 ARG B 24 PHE B 77 SITE 4 AC8 24 ASN B 78 GLN B 81 ASN B 165 ALA B 166 SITE 5 AC8 24 PHE B 167 SER B 168 GLY B 169 THR B 204 SITE 6 AC8 24 ARG B 206 HOH B 402 HOH B 408 HOH B 458 SITE 1 AC9 1 LYS B 76 CRYST1 64.933 68.850 197.497 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015400 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014524 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005063 0.00000