HEADER UNKNOWN FUNCTION 17-JUN-14 4QN1 TITLE CRYSTAL STRUCTURE OF A FUNCTIONALLY UNCHARACTERIZED DOMAIN OF E3 TITLE 2 UBIQUITIN LIGASE SHPRH COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE SHPRH; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1000-1418; COMPND 5 SYNONYM: SNF2, HISTONE-LINKER, PHD AND RING FINGER DOMAIN-CONTAINING COMPND 6 HELICASE; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SHPRH, KIAA2023; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS SHPRH, E3 LIGASE, RING, UBIQUITIN, STRUCTURAL GENOMICS, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,Q.ZHANG,Y.LI,J.R.WALKER,X.GUAN,C.BOUNTRA,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,Y.TONG,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 22-NOV-17 4QN1 1 REMARK REVDAT 2 03-DEC-14 4QN1 1 TITLE REVDAT 1 13-AUG-14 4QN1 0 JRNL AUTH Q.ZHANG,A.DONG,Y.LI,J.R.WALKER,X.GUAN,C.BOUNTRA, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,Y.TONG JRNL TITL CRYSTAL STRUCTURE OF A FUNCTION UNCHARACTERIZED DOMAIN OF E3 JRNL TITL 2 UBIQUITIN LIGASE SHPRH JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 23356 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.230 REMARK 3 FREE R VALUE TEST SET COUNT : 754 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.59 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.68 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2808 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2556 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2712 REMARK 3 BIN R VALUE (WORKING SET) : 0.2539 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.42 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 96 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2896 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 137 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.82640 REMARK 3 B22 (A**2) : -2.82640 REMARK 3 B33 (A**2) : 5.65290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.399 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.309 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.234 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.295 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.232 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL REMARK 3 BOND ANGLES : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|999 - A|1418 } REMARK 3 ORIGIN FOR THE GROUP (A): 71.3814 62.3349 5.9778 REMARK 3 T TENSOR REMARK 3 T11: -0.0659 T22: -0.0658 REMARK 3 T33: -0.1549 T12: 0.0371 REMARK 3 T13: 0.0428 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.8905 L22: 0.5036 REMARK 3 L33: 0.8744 L12: 0.5229 REMARK 3 L13: -0.6404 L23: -0.3825 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.3691 S13: 0.1639 REMARK 3 S21: 0.0026 S22: 0.0934 S23: 0.0327 REMARK 3 S31: -0.0988 S32: -0.1732 S33: -0.1142 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QN1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086260. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23412 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.95100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM FORMATE, 0.1 M BIS REMARK 280 -TRIS, PH 5.5, IN SITU PROTEOLYSIS (1000:1 W/W PROTEIN: REMARK 280 CHYMOTRYPSIN) BEFORE SETUP, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.19033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.38067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.78550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 107.97583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.59517 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.19033 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 86.38067 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 107.97583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 64.78550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.59517 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 1169 REMARK 465 TYR A 1170 REMARK 465 LYS A 1171 REMARK 465 GLN A 1172 REMARK 465 GLN A 1173 REMARK 465 THR A 1174 REMARK 465 GLY A 1175 REMARK 465 LYS A 1176 REMARK 465 LEU A 1177 REMARK 465 SER A 1178 REMARK 465 VAL A 1262 REMARK 465 LYS A 1263 REMARK 465 GLY A 1264 REMARK 465 GLN A 1265 REMARK 465 THR A 1266 REMARK 465 ALA A 1267 REMARK 465 ILE A 1268 REMARK 465 PHE A 1269 REMARK 465 GLU A 1270 REMARK 465 GLU A 1271 REMARK 465 MSE A 1272 REMARK 465 ILE A 1273 REMARK 465 GLU A 1274 REMARK 465 ASP A 1275 REMARK 465 GLU A 1276 REMARK 465 GLU A 1277 REMARK 465 GLY A 1278 REMARK 465 LEU A 1279 REMARK 465 VAL A 1280 REMARK 465 ASP A 1281 REMARK 465 ASP A 1282 REMARK 465 ARG A 1283 REMARK 465 ALA A 1284 REMARK 465 PRO A 1285 REMARK 465 THR A 1286 REMARK 465 THR A 1287 REMARK 465 THR A 1288 REMARK 465 ARG A 1289 REMARK 465 GLY A 1290 REMARK 465 ARG A 1368 REMARK 465 GLU A 1369 REMARK 465 PRO A 1370 REMARK 465 LYS A 1371 REMARK 465 PRO A 1372 REMARK 465 ASN A 1373 REMARK 465 PRO A 1374 REMARK 465 PRO A 1375 REMARK 465 VAL A 1376 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1010 CD CE NZ REMARK 470 LYS A1011 CD CE NZ REMARK 470 ILE A1036 CG1 CG2 CD1 REMARK 470 LYS A1060 CE NZ REMARK 470 LYS A1062 CE NZ REMARK 470 ILE A1080 CG1 CG2 CD1 REMARK 470 ARG A1082 CG CD NE CZ NH1 NH2 REMARK 470 GLN A1101 CD OE1 NE2 REMARK 470 GLU A1156 CG CD OE1 OE2 REMARK 470 MSE A1179 CG SE CE REMARK 470 GLU A1181 CG CD OE1 OE2 REMARK 470 LYS A1182 CG CD CE NZ REMARK 470 ARG A1184 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1205 CD CE NZ REMARK 470 ARG A1235 CG CD NE CZ NH1 NH2 REMARK 470 LEU A1236 CG CD1 CD2 REMARK 470 THR A1261 OG1 CG2 REMARK 470 LEU A1291 CG CD1 CD2 REMARK 470 TRP A1292 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A1292 CZ3 CH2 REMARK 470 LYS A1302 CD CE NZ REMARK 470 ARG A1312 NE CZ NH1 NH2 REMARK 470 GLU A1316 CG CD OE1 OE2 REMARK 470 ARG A1363 CG CD NE CZ NH1 NH2 REMARK 470 VAL A1364 CG1 CG2 REMARK 470 ARG A1365 CG CD NE CZ NH1 NH2 REMARK 470 ASP A1366 CG OD1 OD2 REMARK 470 GLU A1381 CG CD OE1 OE2 REMARK 470 GLU A1386 CG CD OE1 OE2 REMARK 470 GLN A1387 CG CD OE1 NE2 REMARK 470 ILE A1390 CG1 CG2 CD1 REMARK 470 LYS A1391 CD CE NZ REMARK 470 VAL A1398 CG2 REMARK 470 LYS A1405 CE NZ REMARK 470 LYS A1418 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A1039 81.29 -69.75 REMARK 500 LEU A1231 -61.59 -95.34 REMARK 500 ARG A1235 -101.24 -138.31 REMARK 500 TRP A1292 -48.62 -145.59 REMARK 500 HIS A1378 49.86 -81.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1230 ND1 REMARK 620 2 CYS A1229 SG 115.7 REMARK 620 3 CYS A1244 SG 113.0 104.8 REMARK 620 4 CYS A1241 SG 101.0 110.4 112.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1502 DBREF 4QN1 A 1000 1418 UNP Q149N8 SHPRH_HUMAN 1000 1418 SEQADV 4QN1 GLY A 999 UNP Q149N8 EXPRESSION TAG SEQRES 1 A 420 GLY THR MSE GLU GLU LEU LEU THR SER LEU GLN LYS LYS SEQRES 2 A 420 CYS GLY THR GLU CYS GLU GLU ALA HIS ARG GLN LEU VAL SEQRES 3 A 420 CYS ALA LEU ASN GLY LEU ALA GLY ILE HIS ILE ILE LYS SEQRES 4 A 420 GLY GLU TYR ALA LEU ALA ALA GLU LEU TYR ARG GLU VAL SEQRES 5 A 420 LEU ARG SER SER GLU GLU HIS LYS GLY LYS LEU LYS THR SEQRES 6 A 420 ASP SER LEU GLN ARG LEU HIS ALA THR HIS ASN LEU MSE SEQRES 7 A 420 GLU LEU LEU ILE ALA ARG HIS PRO GLY ILE PRO PRO THR SEQRES 8 A 420 LEU ARG ASP GLY ARG LEU GLU GLU GLU ALA LYS GLN LEU SEQRES 9 A 420 ARG GLU HIS TYR MSE SER LYS CYS ASN THR GLU VAL ALA SEQRES 10 A 420 GLU ALA GLN GLN ALA LEU TYR PRO VAL GLN GLN THR ILE SEQRES 11 A 420 HIS GLU LEU GLN ARG LYS ILE HIS SER ASN SER PRO TRP SEQRES 12 A 420 TRP LEU ASN VAL ILE HIS ARG ALA ILE GLU PHE THR ILE SEQRES 13 A 420 ASP GLU GLU LEU VAL GLN ARG VAL ARG ASN GLU ILE THR SEQRES 14 A 420 SER ASN TYR LYS GLN GLN THR GLY LYS LEU SER MSE SER SEQRES 15 A 420 GLU LYS PHE ARG ASP CYS ARG GLY LEU GLN PHE LEU LEU SEQRES 16 A 420 THR THR GLN MSE GLU GLU LEU ASN LYS CYS GLN LYS LEU SEQRES 17 A 420 VAL ARG GLU ALA VAL LYS ASN LEU GLU GLY PRO PRO SER SEQRES 18 A 420 ARG ASN VAL ILE GLU SER ALA THR VAL CYS HIS LEU ARG SEQRES 19 A 420 PRO ALA ARG LEU PRO LEU ASN CYS CYS VAL PHE CYS LYS SEQRES 20 A 420 ALA ASP GLU LEU PHE THR GLU TYR GLU SER LYS LEU PHE SEQRES 21 A 420 SER ASN THR VAL LYS GLY GLN THR ALA ILE PHE GLU GLU SEQRES 22 A 420 MSE ILE GLU ASP GLU GLU GLY LEU VAL ASP ASP ARG ALA SEQRES 23 A 420 PRO THR THR THR ARG GLY LEU TRP ALA ILE SER GLU THR SEQRES 24 A 420 GLU ARG SER MSE LYS ALA ILE LEU SER PHE ALA LYS SER SEQRES 25 A 420 HIS ARG PHE ASP VAL GLU PHE VAL ASP GLU GLY SER THR SEQRES 26 A 420 SER MSE ASP LEU PHE GLU ALA TRP LYS LYS GLU TYR LYS SEQRES 27 A 420 LEU LEU HIS GLU TYR TRP MSE ALA LEU ARG ASN ARG VAL SEQRES 28 A 420 SER ALA VAL ASP GLU LEU ALA MSE ALA THR GLU ARG LEU SEQRES 29 A 420 ARG VAL ARG ASP PRO ARG GLU PRO LYS PRO ASN PRO PRO SEQRES 30 A 420 VAL LEU HIS ILE ILE GLU PRO HIS GLU VAL GLU GLN ASN SEQRES 31 A 420 ARG ILE LYS LEU LEU ASN ASP LYS ALA VAL ALA THR SER SEQRES 32 A 420 GLN LEU GLN LYS LYS LEU GLY GLN LEU LEU TYR LEU THR SEQRES 33 A 420 ASN LEU GLU LYS MODRES 4QN1 MSE A 1001 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1076 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1107 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1179 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1197 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1301 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1325 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1343 MET SELENOMETHIONINE MODRES 4QN1 MSE A 1357 MET SELENOMETHIONINE HET MSE A1001 8 HET MSE A1076 8 HET MSE A1107 8 HET MSE A1179 5 HET MSE A1197 8 HET MSE A1301 8 HET MSE A1325 8 HET MSE A1343 8 HET MSE A1357 8 HET ZN A1501 1 HET SO4 A1502 5 HET UNX A1503 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM UNX UNKNOWN ATOM OR ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 ZN ZN 2+ FORMUL 3 SO4 O4 S 2- FORMUL 4 UNX X FORMUL 5 HOH *137(H2 O) HELIX 1 1 GLY A 999 GLY A 1038 1 40 HELIX 2 2 GLU A 1039 HIS A 1057 1 19 HELIX 3 3 ASP A 1064 ALA A 1081 1 18 HELIX 4 4 ARG A 1094 ALA A 1120 1 27 HELIX 5 5 LEU A 1121 LYS A 1134 1 14 HELIX 6 6 PRO A 1140 PHE A 1152 1 13 HELIX 7 7 ILE A 1154 THR A 1167 1 14 HELIX 8 8 MSE A 1179 PHE A 1183 5 5 HELIX 9 9 ASP A 1185 ASN A 1213 1 29 HELIX 10 10 SER A 1219 LEU A 1231 1 13 HELIX 11 11 CYS A 1241 PHE A 1258 1 18 HELIX 12 12 SER A 1295 HIS A 1311 1 17 HELIX 13 13 ASP A 1314 GLU A 1360 1 47 HELIX 14 14 GLU A 1384 ASN A 1415 1 32 SHEET 1 A 2 ARG A1363 VAL A1364 0 SHEET 2 A 2 ILE A1379 ILE A1380 1 O ILE A1380 N ARG A1363 LINK C THR A1000 N MSE A1001 1555 1555 1.36 LINK C MSE A1001 N GLU A1002 1555 1555 1.35 LINK C LEU A1075 N MSE A1076 1555 1555 1.36 LINK C MSE A1076 N GLU A1077 1555 1555 1.36 LINK C TYR A1106 N MSE A1107 1555 1555 1.35 LINK C MSE A1107 N SER A1108 1555 1555 1.34 LINK C MSE A1179 N SER A1180 1555 1555 1.35 LINK C GLN A1196 N MSE A1197 1555 1555 1.34 LINK C MSE A1197 N GLU A1198 1555 1555 1.35 LINK C SER A1300 N MSE A1301 1555 1555 1.34 LINK C MSE A1301 N LYS A1302 1555 1555 1.35 LINK C SER A1324 N MSE A1325 1555 1555 1.36 LINK C MSE A1325 N ASP A1326 1555 1555 1.35 LINK C TRP A1342 N MSE A1343 1555 1555 1.36 LINK C MSE A1343 N ALA A1344 1555 1555 1.36 LINK C ALA A1356 N MSE A1357 1555 1555 1.34 LINK C MSE A1357 N ALA A1358 1555 1555 1.34 LINK ND1 HIS A1230 ZN ZN A1501 1555 1555 2.08 LINK SG CYS A1229 ZN ZN A1501 1555 1555 2.36 LINK SG CYS A1244 ZN ZN A1501 1555 1555 2.37 LINK SG CYS A1241 ZN ZN A1501 1555 1555 2.38 CISPEP 1 HIS A 1083 PRO A 1084 0 9.69 SITE 1 AC1 4 CYS A1229 HIS A1230 CYS A1241 CYS A1244 SITE 1 AC2 6 ILE A1166 MSE A1179 LEU A1192 GLN A1196 SITE 2 AC2 6 GLU A1296 SER A1300 CRYST1 130.624 130.624 129.571 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007656 0.004420 0.000000 0.00000 SCALE2 0.000000 0.008840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007718 0.00000